Pregenerated sensors for SLC41A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013275Ensembl transcript IDs: ENSMUST00000086559.7
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGAGAGGAGAGAGGCTGCGGGAGGAGGGTATTGGAGGACATGCTaGTGCTTGAGCAACGGGGTTGGCAGTCACTGCAGAGTTAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: VERREAAGGGYWRTC*CLSNGVGSHCRVRG Trigger: GCCCCTAACTCTGCAGTGACTGCCAACCCCGTTGCTCAAGCAGCAGCATGTCCTCCAATACCCTCCTCCCGCAGCCTCTCTCCTCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | GAGAGGAGAGAGGCTGCGGGAGGAGGGTATTGGAGGACATGCTGCTaGTTGAGCAACGGGGTTGGCAGTCACTGCAGAGTTAGGGGCGAA | + |
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Preference number: 1 (lower is better) Translates to: ERREAAGGGYWRTCC*LSNGVGSHCRVRGE Trigger: TTCGCCCCTAACTCTGCAGTGACTGCCAACCCCGTTGCTCAAGCAGCAGCATGTCCTCCAATACCCTCCTCCCGCAGCCTCTCTCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | GATGTGGAGAGGAGAGAGGCTGCGGGAGGAGGGTATTGGAGGACATaGTGCTGCTTGAGCAACGGGGTTGGCAGTCACTGCAGAGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: DVERREAAGGGYWRT*CCLSNGVGSHCRVR Trigger: CCTAACTCTGCAGTGACTGCCAACCCCGTTGCTCAAGCAGCAGCATGTCCTCCAATACCCTCCTCCCGCAGCCTCTCTCCTCTCCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | CTCATTTCAGCTGGGAAGCAATCAGGCAGTTGGGCAAGGCACATGTaGGCAGATGGAATCTCCAGTGCACGTGACTCTGCGGGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LISAGKQSGSWARHM*ADGISSARDSAGRL Trigger: CAGCCTGCCCGCAGAGTCACGTGCACTGGAGATTCCATCTGCGCACATGTGCCTTGCCCAACTGCCTGATTGCTTCCCAGCTGAAATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CCA 90 bp | AAAGAGAGGAGGCTTGAACTCGGTTCTCTAGACTCAGGGGGCACATaGACCTTTGGAAACCTGTGGATGACATGGATCCGTGAAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: KERRLELGSLDSGGT*TFGNLWMTWIREEP Trigger: GGGCTCTTCACGGATCCATGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGTCTAGAGAACCGAGTTCAAGCCTCCTCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 90 bp | CTCCTCCCTCTGTTCAGCCAAACCCTAAACAACCCAGAGCCCACTTaGGAGTTTCTCATTAGGGCCGAGGCTGAGGTCGCTAAAGCTAAT | + |
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Preference number: 1 (lower is better) Translates to: LLPLFSQTLNNPEPT*EFLIRAEAEVAKAN Trigger: ATTAGCTTTAGCGACCTCAGCCTCGGCCCTAATGAGAAACTCTCAAGTGGGCTCTGGGTTGTTTAGGGTTTGGCTGAACAGAGGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | CCCCTGCCCAGTGCTGTGAAGTTGGTCCACATCTATAAAAGTGCGTaGATGTGTGGGAGTGTTAATTATCCCTCCTCCCTCTGTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PLPSAVKLVHIYKSA*MCGSVNYPSSLCSA Trigger: GGCTGAACAGAGGGAGGAGGGATAATTAACACTCCCACACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGCACTGGGCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | CATTCCCTTGTCCTATCCCCAATCTTAGAAGCCCATCTGGCAAGCTaGGCGGAGACGGAGTGTGTGGAGAGAATTAAAGAGAGGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HSLVLSPILEAHLAS*AETECVERIKERRL Trigger: AAGCCTCCTCTCTTTAATTCTCTCCACACACTCCGTCTCCGCGCAGCTTGCCAGATGGGCTTCTAAGATTGGGGATAGGACAAGGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | GGGAAGAATTTATGGATTCCAGACAGACAGGCCAGAAGTACAGCCTaGACCCCATTTGTTGAACAGTTTGGGGCATGTGTAGGGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GKNLWIPDRQARSTA*TPFVEQFGACVGKG Trigger: TCCCTTCCCTACACATGCCCCAAACTGTTCAACAAATGGGGTGCAGGCTGTACTTCTGGCCTGTCTGTCTGGAATCCATAAATTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CCA 90 bp | TTTCTTCCAGTCAGGCCAAAAGTACATGCAATAGGTGCAACCCGGTaGGAAGAAATGAATCTCCTGAAGTCACTCTCCTGTCACTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FLPVRPKVHAIGATR*EEMNLLKSLSCHSR Trigger: CCTGGAGTGACAGGAGAGTGACTTCAGGAGATTCATTTCTTCCCACCGGGTTGCACCTATTGCATGTACTTTTGGCCTGACTGGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 90 bp | CGATCTAACCTCCTCTGGAGGCACCCACCGTGGAATTGCACTTGGTaGTTGTCTCAAAAGTCTACTTTTACTGCTTATGTCAGCCCATCT | + |
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Preference number: 1 (lower is better) Translates to: RSNLLWRHPPWNCTW*LSQKSTFTAYVSPS Trigger: AGATGGGCTGACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTCCACGGTGGGTGCCTCCAGAGGAGGTTAGATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 90 bp | AGTGTTGGTAGACACGGAGCACTGCTTAATCCTTTTCTTGGAGGCTaGCCCTTTAGGCTACACAGGGGGAAGAATTTATGGATTCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SVGRHGALLNPFLGG*PFRLHRGKNLWIPD Trigger: GTCTGGAATCCATAAATTCTTCCCCCTGTGTAGCCTAAAGGGTCAGCCTCCAAGAAAAGGATTAAGCAGTGCTCCGTGTCTACCAACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 90 bp | GGGAAGGGACTTTGGTTTTCTTTGAATCATGGACGAGGCAGATACTaGAGCAGCCTATTGATATCCAGCTTGCTAATTCCAAGCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: GKGLWFSLNHGRGRY*SSLLISSLLIPSPL Trigger: AAGAGGGCTTGGAATTAGCAAGCTGGATATCAATAGGCTGCTTCAGTATCTGCCTCGTCCATGATTCAAAGAAAACCAAAGTCCCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 90 bp | ACCGTGGAATTGCACTTGGTGATTGTCTCAAAAGTCTACTTTTACTaGTTATGTCAGCCCATCTGTCTGTCCCGAATTCTTCCTATCCAA | + |
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Preference number: 1 (lower is better) Translates to: TVELHLVIVSKVYFY*LCQPICLSRILPIQ Trigger: TTGGATAGGAAGAATTCGGGACAGACAGATGGGCTGACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTCCACGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CAA 90 bp | CTCTGCGGGCAGGCTGGCCTGGAGCAGGCCTGTGATTACGAGGAGTaGAAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTTGGTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: LCGQAGLEQACDYEE*KQRSPAQCCEVGPH Trigger: ATGTGGACCAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATCACAGGCCTGCTCCAGGCCAGCCTGCCCGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCAGGTTGAAGAGGCACAATGGCCTCTGTAGCCTAGGGGATGAGGTGAGGAATCTCCAGTGCACGTaGCTCTGCGGGCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TVRLKRHNGLCSLGDEVRNLQCT*LCGQAG Trigger: GCCAGCCTGCCCGCAGAGTCACGTGCACTGGAGATT...CCTCACCTCATCCCCTAGGCTACAGAGGCCATTGTGCCTCTTCAACCTGACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTTGCAAAGGTCCCCGATaGTGGACAGGATGCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PPLPVASISRSFGTFPCPCKGPR*WTGCQG Trigger: ACCTTGGCATCCTGTCCAGCATCGGGGACCTTTGCA...AGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | CCACCCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTAACCCAGAGCCCACTTaGGAGTTTCTCATTAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PPLPVASISRSFGTFPCPNPEPT*EFLIRA Trigger: GGCCCTAATGAGAAACTCTCAAGTGGGCTCTGGGTT...AGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CAA 90 bp | GTCACTGCAGAGTTAGGGGCGAACGAGGGAACATTTACTGTCAGGTaGAAGAGGCACAATGGCCTCTGTAGCCTAGGGGATGAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VTAELGANEGTFTVR*KRHNGLCSLGDEVR Trigger: CCTCACCTCATCCCCTAGGCTACAGAGGCCATTGTGCCTCTTCAACCTGACAGTAAATGTTCCCTCGTTCGCCCCTAACTCTGCAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCAGGTTGAAGAGGCACAATGGCCTCTGTAGCCTAGGGGATGAGGTGAGGAAGCAATCAGGCAGTTaGGCAAGGCACATGTGCGCA | + |
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Preference number: 2 (lower is better) Translates to: TVRLKRHNGLCSLGDEVRKQSGS*ARHMCA Trigger: TGCGCACATGTGCCTTGCCCAACTGCCTGATTGCTT...CCTCACCTCATCCCCTAGGCTACAGAGGCCATTGTGCCTCTTCAACCTGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR CCA 90 bp | GTTGAACAGTTTGGGGCATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATGCGGGCAGGCTGGCCTaGAGCAGGCCTGTGATTACG | + |
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Preference number: 2 (lower is better) Translates to: VEQFGACVGKGLWFSLNHAGRLA*SRPVIT Trigger: CGTAATCACAGGCCTGCTCCAGGCCAGCCTGCCCGC...ATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCAAGCTGCGCGGAGACGGAGTGTGTGGAGAGAATTAAAGAGAGGAGGCTTGACCTTTGGAAACCTGTaGATGACATGGATCCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: WQAARRRSVWRELKRGGLTFGNL*MTWIRE Trigger: TTCACGGATCCATGTCATCCACAGGTTTCCAAAGGT...CAAGCCTCCTCTCTTTAATTCTCTCCACACACTCCGTCTCCGCGCAGCTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | GATGCCTGTGCAAGAGTCTTGTGTTTTGAGATGGAGTTAGGCCAGAGGGAAGAGTTAGCACTGGTGGGTTaGTGCCAGGCACTGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: DACARVLCFEMELGQREELALVG*CQALNL Trigger: TAAGTTCAGTGCCTGGCATCAACCCACCAGTGCTAA...CTCTTCCCTCTGGCCTAACTCCATCTCAAAACACAAGACTCTTGCACAGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | AGCACAGTGTTGGTAGACACGGAGCACTGCTTAATCCTTTTCTTGGAGGCTGACCCTCGTGTGATAGAATaGGTGTGTTTAGGAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: STVLVDTEHCLILFLEADPRVIE*VCLGSD Trigger: GTCACTTCCTAAACACACTCATTCTATCACACGAGG...GTCAGCCTCCAAGAAAAGGATTAAGCAGTGCTCCGTGTCTACCAACACTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR GCA 90 bp | GTTGAACAGTTTGGGGCATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATCGATGCTGGACAGGATaGCAAGGTCCCGATCTAACC | + |
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Preference number: 2 (lower is better) Translates to: VEQFGACVGKGLWFSLNHRCWTG*QGPDLT Trigger: GGTTAGATCGGGACCTTGGCATCCTGTCCAGCATCG...ATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR GCA 90 bp | CCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCTTAGAAAATCCAAATAGAAAGTaGAGAGGGGTGGGGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PQSPGHLAHSLVLSPILENPNRK*RGVGER Trigger: TCTTTCCCCCACCCCTCTGCACTTTCTATTTGGATT...TTCTAAGATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | GGATATGAAAGTAAACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATGCATTCCAAGCCCTCTTCTaGGTGGGTAGCAAGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: GYESKPILFLPVRPKVHAFQALF*VGSKMW Trigger: CCACATCTTGCTACCCACTCAGAAGAGGGCTTGGAA...TGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR GCA 90 bp | CCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCTTAGAAAAAGTCTACTTTTACTaGTTATGTCAGCCCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQSPGHLAHSLVLSPILEKVYFY*LCQPIC Trigger: ACAGATGGGCTGACATAAGCAGTAAAAGTAGACTTT...TTCTAAGATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR CCA 90 bp | GGATATGAAAGTAAACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATGCAAGGGGGAAGAATTTATaGATTCCAGACAGACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GYESKPILFLPVRPKVHARGKNL*IPDRQA Trigger: GGCCTGTCTGTCTGGAATCCATAAATTCTTCCCCCT...TGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR TCA 90 bp | GGATATGAAAGTAAACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATGCAGATTTGCTGAATGAGTaGATGGTTGATGCATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GYESKPILFLPVRPKVHADLLNE*MVDACL Trigger: CAGACATGCATCAACCATTCACTCATTCAGCAAATC...TGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CAA 90 bp | AGACACAGTTCTGTAACTTTTGAAGGATATGAAAGTAAACCAATTTaGTTTCTTCCAGTCAGGCCAAAAGTACATGCAATAGGTGCAACC | + |
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Preference number: 2 (lower is better) Translates to: RHSSVTFEGYESKPI*FLPVRPKVHAIGAT Trigger: GGTTGCACCTATTGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCCTTCAAAAGTTACAGAACTGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | GTGACTCTGCGGGCAGGCTGGCCTGGAGCAGGCCTGTaGTTACGAGGAGTTGAAGCAACGTTCCCCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: VTLRAGWPGAGL*LRGVEATFPCP Trigger: TGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATCACAGGCCTGCTCCAGGCCAGCCTGCCCGCAGAGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 72 bp | AGGAGAGAGGCTGCGGGAGGAGGGTATTGGAGGACATaGTGCTGCTTGAGCAACGGGGTTGGCAGTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: RREAAGGGYWRT*CCLSNGVGSHC Trigger: GCAGTGACTGCCAACCCCGTTGCTCAAGCAGCAGCATGTCCTCCAATACCCTCCTCCCGCAGCCTCTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 72 bp | AGAGAGGCTGCGGGAGGAGGGTATTGGAGGACATGCTaGTGCTTGAGCAACGGGGTTGGCAGTCACTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: REAAGGGYWRTC*CLSNGVGSHCR Trigger: TCTGCAGTGACTGCCAACCCCGTTGCTCAAGCAGCAGCATGTCCTCCAATACCCTCCTCCCGCAGCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | AGGCTGGCCTGGAGCAGGCCTGTGATTACGAGGAGTTaGAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: RLAWSRPVITRS*SNVPLPSAVKL Trigger: CAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATCACAGGCCTGCTCCAGGCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | ACTCAGGGGGCACATGGACCTTTGGAAACCTGTGGATaGCATGGATCCGTGAAGAGCCCGGGTCACTACCAC | + |
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Preference number: 3 (lower is better) Translates to: TQGAHGPLETCG*HGSVKSPGHYH Trigger: GTGGTAGTGACCCGGGCTCTTCACGGATCCATGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 72 bp | TATGCGCCCCGTAACGACTGCTCAGTGAAGAATTATTaGAGGCCGGTGCTGTGGAAGGGCTCATCTCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: YAPRNDCSVKNY*RPVLWKGSSRG Trigger: TCCCCGAGATGAGCCCTTCCACAGCACCGGCCTGCAATAATTCTTCACTGAGCAGTCGTTACGGGGCGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | GAGGTTAGAGCAGCGATTCCCTTAGCACTGGTGGGTTaGTGCCAGGCACTGAACTTAGCACAGTATGCGCCC | + |
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Preference number: 3 (lower is better) Translates to: EVRAAIPLALVG*CQALNLAQYAP Trigger: GGGCGCATACTGTGCTAAGTTCAGTGCCTGGCATCAACCCACCAGTGCTAAGGGAATCGCTGCTCTAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CCA 72 bp | CTAGACTCAGGGGGCACATGGACCTTTGGAAACCTGTaGATGACATGGATCCGTGAAGAGCCCGGGTCACTA | + |
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Preference number: 3 (lower is better) Translates to: LDSGGTWTFGNL*MTWIREEPGSL Trigger: TAGTGACCCGGGCTCTTCACGGATCCATGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | CTGTTCAGCCAAACCCTAAACAACCCAGAGCCCACTTaGGAGTTTCTCATTAGGGCCGAGGCTGAGGTCGCT | + |
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Preference number: 3 (lower is better) Translates to: LFSQTLNNPEPT*EFLIRAEAEVA Trigger: AGCGACCTCAGCCTCGGCCCTAATGAGAAACTCTCAAGTGGGCTCTGGGTTGTTTAGGGTTTGGCTGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR CCA 72 bp | GATATCCAGCTTGCTAATTCCAAGCCCTCTTCTGAGTaGGTAGCAAGATGTGGAGAGGAGAGAGGCTGCGGG | + |
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Preference number: 3 (lower is better) Translates to: DIQLANSKPSSE*VARCGEERGCG Trigger: CCCGCAGCCTCTCTCCTCTCCACATCTTGCTACCCACTCAGAAGAGGGCTTGGAATTAGCAAGCTGGATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | TGTGGAAGGGCTCATCTCGGGGAGGCTGAGATTTGCTaGATGAGTGAATGGTTGATGCATGTCTGTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: CGRAHLGEAEIC*MSEWLMHVCGQ Trigger: CTGCCCACAGACATGCATCAACCATTCACTCATTCAGCAAATCTCAGCCTCCCCGAGATGAGCCCTTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | CAGACAGGCCAGAAGTACAGCCTGCACCCCATTTGTTaGACAGTTTGGGGCATGTGTAGGGAAGGGACTTTG | + |
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Preference number: 3 (lower is better) Translates to: QTGQKYSLHPIC*TVWGMCREGTL Trigger: CAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAACAAATGGGGTGCAGGCTGTACTTCTGGCCTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | CGAGGAGTTGAAGCAACGTTCCCCTGCCCAGTGCTGTaGAGTTGGTCCACATCTATAAAAGTGCGTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: RGVEATFPCPVL*SWSTSIKVRAC Trigger: ACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR TCA 72 bp | GCAAAGGAAGAAGGATGCTTCAGTCTCCAGACAGCCTaGTCCAACTCCAGATGTCAGGATAGAGCAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: AKEEGCFSLQTA*SNSRCQDRASG Trigger: GCCACTTGCTCTATCCTGACATCTGGAGTTGGATCAGGCTGTCTGGAGACTGAAGCATCCTTCTTCCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 72 bp | CTAGGTCTAAGCACAGTGTTGGTAGACACGGAGCACTaGTTAATCCTTTTCTTGGAGGCTGACCCTTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: LGLSTVLVDTEH*LILFLEADPLG Trigger: GCCTAAAGGGTCAGCCTCCAAGAAAAGGATTAAGCAGTGCTCCGTGTCTACCAACACTGTGCTTAGACCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR-3UTR CAA 90 bp | CCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCTTAGAAGCACCCACCGTGGAATaGCACTTGGTGATTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: PQSPGHLAHSLVLSPILEAPTVE*HLVIVS Trigger: TGAGACAATCACCAAGTGCAATTCCACGGTGGGTGC...TTCTAAGATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| 3UTR GCA 72 bp | TTATGGATTCCAGACAGACAGGCCAGAAGTACAGCCTaGACCCCATTTGTTGAACAGTTTGGGGCATGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LWIPDRQARSTA*TPFVEQFGACV Trigger: TACACATGCCCCAAACTGTTCAACAAATGGGGTGCAGGCTGTACTTCTGGCCTGTCTGTCTGGAATCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CCA 72 bp | GTCAGGCCAAAAGTACATGCAATAGGTGCAACCCGGTaGGAAGAAATGAATCTCCTGAAGTCACTCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VRPKVHAIGATR*EEMNLLKSLSC Trigger: ACAGGAGAGTGACTTCAGGAGATTCATTTCTTCCCACCGGGTTGCACCTATTGCATGTACTTTTGGCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR TCA 72 bp | CTCCTCTGGAGGCACCCACCGTGGAATTGCACTTGGTaGTTGTCTCAAAAGTCTACTTTTACTGCTTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLWRHPPWNCTW*LSQKSTFTAYV Trigger: GACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTCCACGGTGGGTGCCTCCAGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR GCA 72 bp | AGTGCTGTGAAGTTGGTCCACATCTATAAAAGTGCGTaGATGTGTGGGAGTGTTAATTATCCCTCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAVKLVHIYKSA*MCGSVNYPSSL Trigger: GAGGGAGGAGGGATAATTAACACTCCCACACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR GCA 72 bp | GTTTCTTCCAGTCAGGCCAAAAGTACATGCAATAGGTaGAACCCGGTGGGAAGAAATGAATCTCCTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSSQAKSTCNR*NPVGRNESPEV Trigger: GACTTCAGGAGATTCATTTCTTCCCACCGGGTTGCACCTATTGCATGTACTTTTGGCCTGACTGGAAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR GCA 72 bp | GGGAAGAGCAGAAATAAACTCAGATCCACACTGATCTaGCTGACACAACCCCAACTAGACAATCTCTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GKSRNKLRSTLI*LTQPQLDNLYE Trigger: TTCATAGAGATTGTCTAGTTGGGGTTGTGTCAGGCAGATCAGTGTGGATCTGAGTTTATTTCTGCTCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAACAGTTTGGGGCATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATCCCAGTGCTGTGAAGTaGGTCCACATCTATAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VEQFGACVGKGLWFSLNHPSAVK*VHIYKS Trigger: ACTTTTATAGATGTGGACCAACTTCACAGCACTGGG...ATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR GCA 72 bp | ACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATaGAATAGGTGCAACCCGGTGGGAAGAAATGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: TNFVSSSQAKST*NRCNPVGRNES Trigger: AGATTCATTTCTTCCCACCGGGTTGCACCTATTGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CCA 72 bp | ATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATaGACGAGGCAGATACTGAAGCAGCCTATTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: MCREGTLVFFES*TRQILKQPIDI Trigger: GATATCAATAGGCTGCTTCAGTATCTGCCTCGTCCATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGCACGTGACTCTGCGGGCAGGCTGGCCTGGAGCAGGCCTGTGATTACGTCACTCTCGTTACTCTaGCTCCCGTTCTCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSARDSAGRLAWSRPVITSLSLL*LPFSSR Trigger: CCTACTGGAGAACGGGAGCCAGAGTAACGAGAGTGA...CGTAATCACAGGCCTGCTCCAGGCCAGCCTGCCCGCAGAGTCACGTGCACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCACCCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTACAACACCTCCCTTGTaGCCGGGCTTCTTCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLPVASISRSFGTFPCPTTPPL*PGFFGP Trigger: TGGCCCGAAGAAGCCCGGCCACAAGGGAGGTGTTGT...AGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GATCCAACTCCAGATGTCAGGATAGAGCAAGTGGCTGGGGACCCTGGGGTCACATCATGTGGAGGAAGGTaGAGATGCGGCTGGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPTPDVRIEQVAGDPGVTSCGGR*RCGWPA Trigger: TGCAGGCCAGCCGCATCTCCACCTTCCTCCACATGA...TGTGACCCCAGGGTCCCCAGCCACTTGCTCTATCCTGACATCTGGAGTTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CAA 72 bp | CAGGCTGGCCTGGAGCAGGCCTGTGATTACGAGGAGTaGAAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLEQACDYEE*KQRSPAQCCEV Trigger: AACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATCACAGGCCTGCTCCAGGCCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCTCCCCAGCTGATGCCTaGGAGGAGTGCCAAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLPQSPGHLAHSLVLSSPADA*EECQGD Trigger: ATCACCTTGGCACTCCTCTCAGGCATCAGCTGGGGA...GGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | CCACCCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTGACAGGCTCCCAGCCTaGATACAACACCTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPVASISRSFGTFPCPDRLPA*IQHLPC Trigger: ACAAGGGAGGTGTTGTATTCAGGCTGGGAGCCTGTC...AGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | TCAGTGAAGAATTATTGCAGGCCGGTGCTGTGGAAGGGCTCATCTCGGGGAGGCCAATGTCCAGCACCATaGCAGCTGCCACAGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVKNYCRPVLWKGSSRGGQCPAP*QLPQSQ Trigger: TTGGGACTGTGGCAGCTGGCATGGTGCTGGACATTG...GCCTCCCCGAGATGAGCCCTTCCACAGCACCGGCCTGCAATAATTCTTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | GATTACGAGGAGTTGAAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTTGGTCCAGACGGCTGCGATGGATaGCAGGAAGCCTACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: DYEELKQRSPAQCCEVGPDGCDG*QEAYHR Trigger: ACGGTGGTAGGCTTCCTGGCATCCATCGCAGCCGTC...TGGACCAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | AGAAATGAATCTCCTGAAGTCACTCTCCTGTCACTCCAGGCCCCTCCACTCACAAGGGTGAGGGTGGTGTaGCCGCCCTGCATACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNESPEVTLLSLQAPPLTRVRVV*PPCIQL Trigger: CAGCTGTATGCAGGGCGGGCACACCACCCTCACCCT...TGTGAGTGGAGGGGCCTGGAGTGACAGGAGAGTGACTTCAGGAGATTCATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | CTCGGTTCTCTAGACTCAGGGGGCACATGGACCTTTGGAAACCTGTGGATGACACGGCCCCACATCCAGTaGACCATCCAGTCTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLDSGGTWTFGNLWMTRPHIQ*TIQSAM Trigger: CATCGCAGACTGGATGGTGCACTGGATGTGGGGCCG...TGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGTCTAGAGAACCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCAGGTGGTGCATGGACTaGGGCAGCGGCGAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPQSPGHLAHSLVLSPIRWCMD*GSGEEL Trigger: CAACTCCTCGCCGCTGCCCCAGTCCATGCACCACCT...GATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCGAAGAAGGTGGTGCATaGACTGGGGCAGCGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPQSPGHLAHSLVLSPIEEGGA*TGAAAR Trigger: CCTCGCCGCTGCCCCAGTCCATGCACCACCTTCTTC...GATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | CCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCCAGCACCATGCCAGCTaGCACAGTCCCAAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPQSPGHLAHSLVLSPIQHHAS*HSPKAC Trigger: GCAGGCTTTGGGACTGTGGCAGCTGGCATGGTGCTG...GATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GATTACGAGGAGTTGAAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTTGGTCCAAGACGACGGCTGCGATaGATGCCAGGAAGCCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: DYEELKQRSPAQCCEVGPRRRLR*MPGSLP Trigger: TGGTAGGCTTCCTGGCATCCATCGCAGCCGTCGTCT...TGGACCAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCAGGTGGAGATGCGGCTaGCCTGCACAGCCACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLPQSPGHLAHSLVLSPIRWRCG*PAQPPD Trigger: ATCTGGTGGCTGTGCAGGCCAGCCGCATCTCCACCT...GATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | GATGCCTGTGCAAGAGTCTTGTGTTTTGAGATGGAGTTAGGCCAGAGGGAAGAGGGTAGAGTCCCCAGCTaGTGCCTGAGAGGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DACARVLCFEMELGQREEGRVPS*CLRGVP Trigger: TGGCACTCCTCTCAGGCATCAGCTGGGGACTCTACC...CTCTTCCCTCTGGCCTAACTCCATCTCAAAACACAAGACTCTTGCACAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GATTACGAGGAGTTGAAGCAACGTTCCCCTGCCCAGTGCTGTGAAGTTGGTCCACTCAGAGTTCTCCCCTaGCATGCCGTTCATGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYEELKQRSPAQCCEVGPLRVLP*HAVHVE Trigger: CTCCACATGAACGGCATGCCAGGGGAGAACTCTGAG...TGGACCAACTTCACAGCACTGGGCAGGGGAACGTTGCTTCAACTCCTCGTAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | AGAAATGAATCTCCTGAAGTCACTCTCCTGTCACTCCAGGCCCCTCCACTCACATTTCCAAGTTCCCTTTaGGCCCCAGCAGTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNESPEVTLLSLQAPPLTFPSSL*APAVQA Trigger: TGCCTGCACTGCTGGGGCTCAAAGGGAACTTGGAAA...TGTGAGTGGAGGGGCCTGGAGTGACAGGAGAGTGACTTCAGGAGATTCATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGCTGCGCGGAGACGGAGTGTGTGGAGAGAATTAAAGAGAGGAGGCTTGCTACGTTGTCTGGGTTaGTCCCAATCTTTCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: WQAARRRSVWRELKRGGLLRCLG*SQSFET Trigger: GGTCTCGAAAGATTGGGATCAACCCAGACAACGTAG...CAAGCCTCCTCTCTTTAATTCTCTCCACACACTCCGTCTCCGCGCAGCTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | CTCGGTTCTCTAGACTCAGGGGGCACATGGACCTTTGGAAACCTGTGGATGACAAAGACCTCCCAGTGCTaGACAATGTCCAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLDSGGTWTFGNLWMTKTSQC*TMSSTM Trigger: CATGGTGCTGGACATTGTGCAGCACTGGGAGGTCTT...TGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGTCTAGAGAACCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCGTGCACCATCCAGTCTaGGATGTACAGGAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLPQSPGHLAHSLVLSVHHPV*DVQENQ Trigger: CTGATTCTCCTGTACATCGCAGACTGGATGGTGCAC...GGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTCTCTAGACTCAGGGGGCACATGGACCTTTGGAAACCTGTGGATGACACCATTTGTCCAATGTTaGCTGCAGTGGACAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLDSGGTWTFGNLWMTPFVQC*LQWTAS Trigger: CGAGGCTGTCCACTGCAGCCAACATTGGACAAATGG...TGTCATCCACAGGTTTCCAAAGGTCCATGTGCCCCCTGAGTCTAGAGAACCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGCTGCGCGGAGACGGAGTGTGTGGAGAGAATTAAAGAGAGGAGGCTTGCAGTCAAGTATGGGATaGAGAAGTTGTCGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQAARRRSVWRELKRGGLQSSMG*RSCRGP Trigger: TGGACCCCGACAACTTCTCCATCCCATACTTGACTG...CAAGCCTCCTCTCTTTAATTCTCTCCACACACTCCGTCTCCGCGCAGCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCACCCCTCCCCGTTGCCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTCAAAGCAGTCAAGTATaGGATGGAGAAGTTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPVASISRSFGTFPCPQSSQV*DGEVVG Trigger: CCCGACAACTTCTCCATCCCATACTTGACTGCTTTG...AGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGGCAACGGGGAGGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CAA 72 bp | ACTACCACTCATTTCAGCTGGGAAGCAATCAGGCAGTaGGGCAAGGCACATGTGCGCAGATGGAATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTTHFSWEAIRQ*GKAHVRRWNLQ Trigger: CTGGAGATTCCATCTGCGCACATGTGCCTTGCCCAACTGCCTGATTGCTTCCCAGCTGAAATGAGTGGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CAA 72 bp | GAGTTAGGGGCGAACGAGGGAACATTTACTGTCAGGTaGAAGAGGCACAATGGCCTCTGTAGCCTAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELGANEGTFTVR*KRHNGLCSLGD Trigger: ATCCCCTAGGCTACAGAGGCCATTGTGCCTCTTCAACCTGACAGTAAATGTTCCCTCGTTCGCCCCTAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | GATGCCTGTGCAAGAGTCTTGTGTTTTGAGATGGAGTTAGGCCAGAGGGAAGAGTGTCTCTGTCCCCAATaGGCCAGAGCACATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DACARVLCFEMELGQREECLCPQ*ARAHGS Trigger: GCTTCCATGTGCTCTGGCTCATTGGGGACAGAGACA...CTCTTCCCTCTGGCCTAACTCCATCTCAAAACACAAGACTCTTGCACAGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | GTTGAACAGTTTGGGGCATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATAAAAGGAGGTCTCCTTaGGCGGAGAGGGTGGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQFGACVGKGLWFSLNHKRRSP*AERVAR Trigger: CCGCGCCACCCTCTCCGCTCAAGGAGACCTCCTTTT...ATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | CCTCAATCTCCAGGTCATTTGGCACATTCCCTTGTCCTATCCCCAATCTTAGAAGGCATGCCGTTCATGTaGAGGAAGGTGGAGATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSPGHLAHSLVLSPILEGMPFM*RKVEMR Trigger: CCGCATCTCCACCTTCCTCCACATGAACGGCATGCC...TTCTAAGATTGGGGATAGGACAAGGGAATGTGCCAAATGACCTGGAGATTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| 3UTR CAA 72 bp | GTGTTGGTAGACACGGAGCACTGCTTAATCCTTTTCTaGGAGGCTGACCCTTTAGGCTACACAGGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLVDTEHCLILF*EADPLGYTGGR Trigger: TCTTCCCCCTGTGTAGCCTAAAGGGTCAGCCTCCAAGAAAAGGATTAAGCAGTGCTCCGTGTCTACCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | AGCACAGTGTTGGTAGACACGGAGCACTGCTTAATCCTTTTCTTGGAGGCTGACCTGGTGGATGTCCTTTaGCTCTGGCTTAGAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: STVLVDTEHCLILFLEADLVDVL*LWLRGH Trigger: ATGTCCTCTAAGCCAGAGCCAAAGGACATCCACCAG...GTCAGCCTCCAAGAAAAGGATTAAGCAGTGCTCCGTGTCTACCAACACTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GGAATTGCACTTGGTGATTGTCTCAAAAGTCTACTTTTACTGCTTATGTCAGCCGCAGCGGCGAGGAGTTaGCTCAGAGTTCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GIALGDCLKSLLLLLMSAAAARS*LRVLPW Trigger: CCAGGGGAGAACTCTGAGCCAACTCCTCGCCGCTGC...GGCTGACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | GGTGATTGTCTCAAAAGTCTACTTTTACTGCTTATGTCAGCCCATCTGTCTGTCCACATGGAAGCTGAGTaGCAGGAGTCCGGTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDCLKSLLLLLMSAHLSVHMEAE*QESGAK Trigger: CTTGGCACCGGACTCCTGGCACTCAGCTTCCATGTG...GACAGACAGATGGGCTGACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR GCA 90 bp | GCTGTGAAGTTGGTCCACATCTATAAAAGTGCGTGCATGTGTGGGAGTGTTAATGAAGACAGCCATTCCTaGAAAGTTGGGGTCCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVKLVHIYKSACMCGSVNEDSHS*KVGVRD Trigger: GTCTCGGACCCCAACTTTGCAGGAATGGCTGTCTTC...ATTAACACTCCCACACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAAGTTGGTCCACATCTATAAAAGTGCGTGCATGTGTGGGAGTGTTAATAGGAGAATCAGCACCTaGAGCAGTGCAGCAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AVKLVHIYKSACMCGSVNRRIST*SSAAVM Trigger: CATGACTGCTGCACTGCTCCAGGTGCTGATTCTCCT...ATTAACACTCCCACACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | GGATATGAAAGTAAACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATGCAGGCCCCGGTCTGTGCTaGCATCGTCACTCTCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GYESKPILFLPVRPKVHAGPGLC*HRHSRY Trigger: GTAACGAGAGTGACGATGTCAGCACAGACCGGGGCC...TGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | GCTGTGAAGTTGGTCCACATCTATAAAAGTGCGTGCATGTGTGGGAGTGTTAATAATTCACATCAGGGCTaGAGAAGGTGGTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVKLVHIYKSACMCGSVNNSHQG*RRWCMD Trigger: GTCCATGCACCACCTTCTTCAGCCCTGATGTGAATT...ATTAACACTCCCACACATGCACGCACTTTTATAGATGTGGACCAACTTCACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR CCA 90 bp | GTTGAACAGTTTGGGGCATGTGTAGGGAAGGGACTTTGGTTTTCTTTGAATCATTGTGGGATGCTAAAGTaGCCATCAGGGATCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEQFGACVGKGLWFSLNHCGMLK*PSGIQP Trigger: TGGCTGGATCCCTGATGGCCACTTTAGCATCCCACA...ATGATTCAAAGAAAACCAAAGTCCCTTCCCTACACATGCCCCAAACTGTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
||
| CDS-3UTR TCA 90 bp | ACCGTGGAATTGCACTTGGTGATTGTCTCAAAAGTCTACTTTTACTGCTTATGTCGCCCTGCATACAGCTaGTGGTGTAGAGGAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TVELHLVIVSKVYFYCLCRPAYS*WCRGTL Trigger: TAGTGTTCCTCTACACCATCAGCTGTATGCAGGGCG...ACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTCCACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CCA 90 bp | GGATATGAAAGTAAACCAATTTTGTTTCTTCCAGTCAGGCCAAAAGTACATGCACGTGGCTACGTTGTCTaGGTTGATCCCAATCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: GYESKPILFLPVRPKVHARGYVV*VDPNLS Trigger: CGAAAGATTGGGATCAACCCAGACAACGTAGCCACG...TGCATGTACTTTTGGCCTGACTGGAAGAAACAAAATTGGTTTACTTTCATATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 90 bp | GACTGGGGCAGCGGCGAGGAGTTGGCTCAGAGTTCTCCCCTGGCATaGCGTTCATGTGGAGGAAGGTGGAGATGCGGCTGGCCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: DWGSGEELAQSSPLA*RSCGGRWRCGWPAQ Trigger: CTGTGCAGGCCAGCCGCATCTCCACCTTCCTCCACATGAACGGCATGCCAGGGGAGAACTCTGAGCCAACTCCTCGCCGCTGCCCCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 90 bp | GGCGCGGGGCCCCGGTCTGTGCTGACATCGTCACTCTCGTTACTCTaGCTCCCGTTCTCCAGTAGGGCGTCCTCCTCCCGAATTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GAGPRSVLTSSLSLL*LPFSSRASSSRIPL Trigger: CAAGGGAATTCGGGAGGAGGACGCCCTACTGGAGAACGGGAGCCAGAGTAACGAGAGTGACGATGTCAGCACAGACCGGGGCCCCGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 90 bp | GCATGGACTGGGGCAGCGGCGAGGAGTTGGCTCAGAGTTCTCCCCTaGCATGCCGTTCATGTGGAGGAAGGTGGAGATGCGGCTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AWTGAAARSWLRVLP*HAVHVEEGGDAAGL Trigger: CAGGCCAGCCGCATCTCCACCTTCCTCCACATGAACGGCATGCCAGGGGAGAACTCTGAGCCAACTCCTCGCCGCTGCCCCAGTCCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 90 bp | GCCACACTGCTGGCGCATAGCAGGAAGGCGTGTGGGATGCTAAAGTaGCCATCAGGGATCCAGCCAAAGACGACGGCTGCGATGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: ATLLAHSRKACGMLK*PSGIQPKTTAAMDA Trigger: GGCATCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTTAGCATCCCACACGCCTTCCTGCTATGCGCCAGCAGTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS TCA 90 bp | GTATCGCCAGTGCTTCAGTTCCAGGTAGAGTCCCCAGCTGATGCCTaGGAGGAGTGCCAAGGTGATGAGGTCGCCCAGGCTAGCGGCGAT | + |
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Preference number: 5 (lower is better) Translates to: VSPVLQFQVESPADA*EECQGDEVAQASGD Trigger: ATCGCCGCTAGCCTGGGCGACCTCATCACCTTGGCACTCCTCTCAGGCATCAGCTGGGGACTCTACCTGGAACTGAAGCACTGGCGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 90 bp | GCTGCCACAGTCCCAAAGCCTGCCAGTAGGAAGGGGAACAGCACTTaGAGTCCAATGGAAAAGGAGGTCTCCTTGAGCGGAGAGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: AATVPKPASRKGNST*SPMEKEVSLSGEGG Trigger: GCCACCCTCTCCGCTCAAGGAGACCTCCTTTTCCATTGGACTGCAAGTGCTGTTCCCCTTCCTACTGGCAGGCTTTGGGACTGTGGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 90 bp | AAAGTGGCCATCAGGGATCCAGCCAAAGACGACGGCTGCGATGGATaGCAGGAAGCCTACCACCGTGGCTTGTACCTGGATAAGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: KVAIRDPAKDDGCDG*QEAYHRGLYLDKGH Trigger: ATGGCCCTTATCCAGGTACAAGCCACGGTGGTAGGCTTCCTGGCATCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 90 bp | TGGGATGCTAAAGTGGCCATCAGGGATCCAGCCAAAGACGACGGCTaGGATGGATGCCAGGAAGCCTACCACCGTGGCTTGTACCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: WDAKVAIRDPAKDDG*DGCQEAYHRGLYLD Trigger: ATCCAGGTACAAGCCACGGTGGTAGGCTTCCTGGCATCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTTAGCATCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | TCAGTGAAGAATTATTGCAGGCCGGTGCTGTGGAAGGGCTCATCTCGGGGAGGCAATACAACACCTCCCTaGTGGCCGGGCTTCTTCGGG | + |
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Preference number: 5 (lower is better) Translates to: SVKNYCRPVLWKGSSRGGNTTPP*WPGFFG Trigger: CCCGAAGAAGCCCGGCCACAAGGGAGGTGTTGTATT...GCCTCCCCGAGATGAGCCCTTCCACAGCACCGGCCTGCAATAATTCTTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | CCAAGGTCCCGATCTAACCTCCTCTGGAGGCACCCACCGTGGAATTGCACTTGGGAAGGGGAACAGCACTaGCAGTCCAATGGAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PRSRSNLLWRHPPWNCTWEGEQH*QSNGKG Trigger: TCCTTTTCCATTGGACTGCAAGTGCTGTTCCCCTTC...CCAAGTGCAATTCCACGGTGGGTGCCTCCAGAGGAGGTTAGATCGGGACCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | TGCTTATGTCAGCCCATCTGTCTGTCCCGAATTCTTCCTATCCAAACTTGGCTCGGCAGCGGCGAGGAGTaGGCTCAGAGTTCTCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLCQPICLSRILPIQTWLGSGEE*AQSSPL Trigger: CAGGGGAGAACTCTGAGCCAACTCCTCGCCGCTGCC...GAGCCAAGTTTGGATAGGAAGAATTCGGGACAGACAGATGGGCTGACATAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 90 bp | ATTGCCCCCGACACCATTAATCACAGGTGTGAAGACAGCCATTCCTaGAAAGTTGGGGTCCGAGACGGTCTTGTCCAGGATGAGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: IAPDTINHRCEDSHS*KVGVRDGLVQDETS Trigger: GGAGGTCTCATCCTGGACAAGACCGTCTCGGACCCCAACTTTGCAGGAATGGCTGTCTTCACACCTGTGATTAATGGTGTCGGGGGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | TGGCAAGCTGCGCGGAGACGGAGTGTGTGGAGAGAATTAAAGAGAGGAGGCTTGTCCATTTGTCCAATGTaGGCTGCAGTGGACAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: WQAARRRSVWRELKRGGLSICPM*AAVDSL Trigger: GAGGCTGTCCACTGCAGCCAACATTGGACAAATGGA...CAAGCCTCCTCTCTTTAATTCTCTCCACACACTCCGTCTCCGCGCAGCTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | GAATTGCACTTGGTGATTGTCTCAAAAGTCTACTTTTACTGCTTATGTCAGCCCTATGGGATGGAGAAGTaGTCGGGGTCCAGGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: ELHLVIVSKVYFYCLCQPYGMEK*SGSRPR Trigger: CCGGGGCCTGGACCCCGACAACTTCTCCATCCCATA...GGGCTGACATAAGCAGTAAAAGTAGACTTTTGAGACAATCACCAAGTGCAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS-3UTR CAA 90 bp | TGCTTATGTCAGCCCATCTGTCTGTCCCGAATTCTTCCTATCCAAACTTGGCTCCTTAGGTGTGTCCATTaGTCCAATGTTGGCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: CLCQPICLSRILPIQTWLLRCVH*SNVGCS Trigger: ACTGCAGCCAACATTGGACAAATGGACACACCTAAG...GAGCCAAGTTTGGATAGGAAGAATTCGGGACAGACAGATGGGCTGACATAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 72 bp | GGGGCAGCGGCGAGGAGTTGGCTCAGAGTTCTCCCCTaGCATGCCGTTCATGTGGAGGAAGGTGGAGATGCG | + |
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Preference number: 6 (lower is better) Translates to: GAAARSWLRVLP*HAVHVEEGGDA Trigger: CGCATCTCCACCTTCCTCCACATGAACGGCATGCCAGGGGAGAACTCTGAGCCAACTCCTCGCCGCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 72 bp | CAGGCCCCGGCCCCACATCCAGTGCACCATCCAGTCTaGGATGTACAGGAGAATCAGCACCTGGAGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: QAPAPHPVHHPV*DVQENQHLEQC Trigger: GCACTGCTCCAGGTGCTGATTCTCCTGTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGGGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 72 bp | GTTGGCTCAGAGTTCTCCCCTGGCATGCCGTTCATGTaGAGGAAGGTGGAGATGCGGCTGGCCTGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VGSEFSPGMPFM*RKVEMRLACTA Trigger: GGCTGTGCAGGCCAGCCGCATCTCCACCTTCCTCCACATGAACGGCATGCCAGGGGAGAACTCTGAGCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 72 bp | GGCCATCAGGGATCCAGCCAAAGACGACGGCTGCGATaGATGCCAGGAAGCCTACCACCGTGGCTTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: GHQGSSQRRRLR*MPGSLPPWLVP Trigger: AGGTACAAGCCACGGTGGTAGGCTTCCTGGCATCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CCA 72 bp | CTGGCGCATAGCAGGAAGGCGTGTGGGATGCTAAAGTaGCCATCAGGGATCCAGCCAAAGACGACGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LAHSRKACGMLK*PSGIQPKTTAA Trigger: CGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTTAGCATCCCACACGCCTTCCTGCTATGCGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 90 bp | CTCTGGCTCCCGTTCTCCAGTAGGGCGTCCTCCTCCCGAATTCCCTaGGCGTTAGCTCGGGACTCAATCACTACCACCTCCACCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LWLPFSSRASSSRIP*ALARDSITTTSTPS Trigger: TGATGGGGTGGAGGTGGTAGTGATTGAGTCCCGAGCTAACGCCAAGGGAATTCGGGAGGAGGACGCCCTACTGGAGAACGGGAGCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 72 bp | GGAAGACCTCCCAGTGCTGCACAATGTCCAGCACCATaGCAGCTGCCACAGTCCCAAAGCCTGCCAGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: GRPPSAAQCPAP*QLPQSQSLPVG Trigger: TCCTACTGGCAGGCTTTGGGACTGTGGCAGCTGGCATGGTGCTGGACATTGTGCAGCACTGGGAGGTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 72 bp | CCGTTCTCCAGTAGGGCGTCCTCCTCCCGAATTCCCTaGGCGTTAGCTCGGGACTCAATCACTACCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: PFSSRASSSRIP*ALARDSITTTS Trigger: GGAGGTGGTAGTGATTGAGTCCCGAGCTAACGCCAAGGGAATTCGGGAGGAGGACGCCCTACTGGAGAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS TCA 72 bp | TGGGACCACAAGGAGGAAGAGGACACGGGCCGAGCGTaGATTCACATCAGGGCTGAAGAAGGTGGTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: WDHKEEEDTGRA*IHIRAEEGGAW Trigger: CCATGCACCACCTTCTTCAGCCCTGATGTGAATTCACGCTCGGCCCGTGTCCTCTTCCTCCTTGTGGTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 72 bp | ATCAGGGATCCAGCCAAAGACGACGGCTGCGATGGATaGCAGGAAGCCTACCACCGTGGCTTGTACCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: IRDPAKDDGCDG*QEAYHRGLYLD Trigger: ATCCAGGTACAAGCCACGGTGGTAGGCTTCCTGGCATCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 72 bp | CGTGATCATCCGCCAGAGCTCCTTAGGTGTGTCCATTaGTCCAATGTTGGCTGCAGTGGACAGCCTCGACGC | + |
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Preference number: 6 (lower is better) Translates to: RDHPPELLRCVH*SNVGCSGQPRR Trigger: GCGTCGAGGCTGTCCACTGCAGCCAACATTGGACAAATGGACACACCTAAGGAGCTCTGGCGGATGATCACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 72 bp | GGCTGCGATGGATGCCAGGAAGCCTACCACCGTGGCTaGTACCTGGATAAGGGCCATATTCCCCGTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: GCDGCQEAYHRG*YLDKGHIPRDH Trigger: ATGATCACGGGGAATATGGCCCTTATCCAGGTACAAGCCACGGTGGTAGGCTTCCTGGCATCCATCGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 72 bp | ACAGCCATTCCTGCAAAGTTGGGGTCCGAGACGGTCTaGTCCAGGATGAGACCTCCCACACTGCTGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAIPAKLGSETV*SRMRPPTLLIA Trigger: GGCTATCAGCAGTGTGGGAGGTCTCATCCTGGACAAGACCGTCTCGGACCCCAACTTTGCAGGAATGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 90 bp | GGTGTGAAGACAGCCATTCCTGCAAAGTTGGGGTCCGAGACGGTCTaGTCCAGGATGAGACCTCCCACACTGCTGATAGCCATAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: GVKTAIPAKLGSETV*SRMRPPTLLIAIAM Trigger: CATTGCTATGGCTATCAGCAGTGTGGGAGGTCTCATCCTGGACAAGACCGTCTCGGACCCCAACTTTGCAGGAATGGCTGTCTTCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS CAA 90 bp | CCGACACCATTAATCACAGGTGTGAAGACAGCCATTCCTGCAAAGTaGGGGTCCGAGACGGTCTTGTCCAGGATGAGACCTCCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: PTPLITGVKTAIPAK*GSETVLSRMRPPTL Trigger: CAGTGTGGGAGGTCTCATCCTGGACAAGACCGTCTCGGACCCCAACTTTGCAGGAATGGCTGTCTTCACACCTGTGATTAATGGTGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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| CDS GCA 72 bp | GACACCATTAATCACAGGTGTGAAGACAGCCATTCCTaGAAAGTTGGGGTCCGAGACGGTCTTGTCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: DTINHRCEDSHS*KVGVRDGLVQD Trigger: ATCCTGGACAAGACCGTCTCGGACCCCAACTTTGCAGGAATGGCTGTCTTCACACCTGTGATTAATGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086559.7 |
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