Pregenerated sensors for SLC40A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025993Ensembl transcript IDs: ENSMUST00000027137.11, ENSMUST00000186804.2, ENSMUST00000187406.7, ENSMUST00000187420.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCAAGTCAGTGAAGGTAAAATGTTCTATACAGACTCACTGATTTaGAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTTGTAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: AQVSEGKMFYTDSLI*SPFLVWAAFLLVRC Trigger: GCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAATCAGTGAGTCTGTATAGAACATTTTACCTTCACTGACTTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR CCA 90 bp | AAAATGTTCTATACAGACTCACTGATTTGCAGTCCTTTCTTAGTGTaGGCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGTTCTCTCATT | + |
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Preference number: 1 (lower is better) Translates to: KMFYTDSLICSPFLV*AAFLLVRCQVSSLI Trigger: AATGAGAGAACTGACCTGGCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAATCAGTGAGTCTGTATAGAACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR TCA 90 bp | GTAAGGGAAGTTCATTTTACCATTAAACCCTTCCTATACACACGCTaGCTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: VREVHFTIKPFLYTR*LPLPLPIFQCLHVR Trigger: CCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGTGTGTATAGGAAGGGTTTAATGGTAAAATGAACTTCCCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR CCA 90 bp | GAAAAGATTAAACTGAACGACAAAGAAAGTGCTCACAGCAATGCATaGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGT | + |
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Preference number: 1 (lower is better) Translates to: EKIKLNDKESAHSNA*QSVSMKVHQKLRQC Trigger: ACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTGCTGTGAGCACTTTCTTTGTCGTTCAGTTTAATCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR-3UTR GCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCTATACACACGCTGACTaGCTCTCCCTCTTCCTATTT | + |
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Preference number: 2 (lower is better) Translates to: QCMAVSLHESASKVKAMSYTHAD*LSLFLF Trigger: AAATAGGAAGAGGGAGAGGCAGTCAGCGTGTGTATA...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR-3UTR GCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCCAAAATAAGCACACATaGTCTCCACAATCTAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QCMAVSLHESASKVKAMSQNKHT*SPQSSN Trigger: GTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTG...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR-3UTR CCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCAATGCAGGCATTTATTaGGATTCTGCAGTACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QCMAVSLHESASKVKAMSNAGIY*DSAVQN Trigger: ATTTTGTACTGCAGAATCCCAATAAATGCCTGCATT...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR GCA 72 bp | AGTGAAGGTAAAATGTTCTATACAGACTCACTGATTTaGAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SEGKMFYTDSLI*SPFLVWAAFLL Trigger: AAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAATCAGTGAGTCTGTATAGAACATTTTACCTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR CCA 72 bp | AAACTGAACGACAAAGAAAGTGCTCACAGCAATGCATaGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: KLNDKESAHSNA*QSVSMKVHQKL Trigger: TAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTGCTGTGAGCACTTTCTTTGTCGTTCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR-3UTR CAA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAAAAATGCAGGCATTTATaGGGATTCTGCAGTACAAAA | + |
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Preference number: 3 (lower is better) Translates to: TLTASPSSYFPMFTCKEKKCRHL*GFCSTK Trigger: TTTTGTACTGCAGAATCCCAATAAATGCCTGCATTT...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR CCA 72 bp | GATGTGGTAAAACCAGAGAGAAATGCAGGCATTTATTaGGATTCTGCAGTACAAAATAAGCACACATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: DVVKPERNAGIY*DSAVQNKHTCS Trigger: AGAGCATGTGTGCTTATTTTGTACTGCAGAATCCCAATAAATGCCTGCATTTCTCTCTGGTTTTACCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ATTTGCAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAAGGGCTCTGCCATCTaGGAGGCACAGGTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ICSPFLVWAAFLLVRCQVKGSAI*EAQVGS Trigger: AGAGCCCACCTGTGCCTCCCAGATGGCAGAGCCCTT...GACCTGGCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGTACAAAATAAGCACACATGCTCTCCACAATCTAGTAACAGGGGCCACTCTGGCCGACAGCCATaGGGGCCAGGATGTTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SAVQNKHTCSPQSSNRGHSGRQP*GPGCWL Trigger: TAACCAACATCCTGGCCCCCATGGCTGTCGGCCAGA...GTGGCCCCTGTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTGTACTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | TCTGCAGTACAAAATAAGCACACATGCTCTCCACAATCTAGTAACAGGGGCCACGACCAGAACAGAGCCTaGCACCACCAGTCCATAGAC | + |
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Preference number: 4 (lower is better) Translates to: SAVQNKHTCSPQSSNRGHDQNRA*HHQSID Trigger: GTCTATGGACTGGTGGTGGCAGGCTCTGTTCTGGTC...GTGGCCCCTGTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTGTACTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | ATTTGCAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGCAGCAATGACTCCTaGAAACAGCAGGCTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: ICSPFLVWAAFLLVRCQVSSNDS*KQQADR Trigger: TCTGTCAGCCTGCTGTTTGCAGGAGTCATTGCTGCT...GACCTGGCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGTACAAAATAAGCACACATGCTCTCCACAATCTAGTAACAGGGGCCACCCAAATGTCATAATCTaGCCGACAGCCATGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAVQNKHTCSPQSSNRGHPNVII*PTAMGA Trigger: GGCCCCCATGGCTGTCGGCCAGATTATGACATTTGG...GTGGCCCCTGTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTGTACTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ATTTGCAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTTGTAAGGTGCCAGGTCGCCAGCCAGAAACACTaGCTGGTTATAGTAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ICSPFLVWAAFLLVRCQVASQKH*LVIVGD Trigger: GTCTCCTACTATAACCAGCCAGTGTTTCTGGCTGGC...GACCTGGCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCCTGCAAACAGCAGGCTaGCAGAGACTATGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSLQTAG*QRLWGW Trigger: CCATCCCCATAGTCTCTGTCAGCCTGCTGTTTGCAG...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGTACAAAATAAGCACACATGCTCTCCACAATCTAGTAACAGGGGCCACTGGGGGCCAGGATGTTaGTTAGCTGGTCAATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SAVQNKHTCSPQSSNRGHWGPGC*LAGQSF Trigger: GAAGGATTGACCAGCTAACCAACATCCTGGCCCCCA...GTGGCCCCTGTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTGTACTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCAGTCCCTTTGGATTGTaGTCGCAGTGGCAGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSSPFGL*SQWQYW Trigger: CCAGTACTGCCACTGCGATCACAATCCAAAGGGACT...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCTTCGACGTAGCCAGGTaGAGGCCACAGTTCCCATTA | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSFDVAR*RPQFPL Trigger: TAATGGGAACTGTGGCCTTCACCTGGCTACGTCGAA...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | GCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGTTCTCTCATTTACCAAAATAGTATCCATCTCGGAAAGTaGGGAAGGGCTCTGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: AAFLLVRCQVSSLIYQNSIHLGK*GRALPS Trigger: AGATGGCAGAGCCCTTCCGCACTTTCCGAGATGGAT...ACTATTTTGGTAAATGAGAGAACTGACCTGGCACCTTACAAGCAGAAAAGCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACAGGAAAGCCAGGCCCATaGCAGCCAGAAACACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTGKPGP*QPETLA Trigger: AGCCAGTGTTTCTGGCTGGCATGGGCCTGGCTTTCC...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | TCTGCAGTACAAAATAAGCACACATGCTCTCCACAATCTAGTAACAGGGGCCACCCCATCCATGGTACATaGTCAGGAGCTCATTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SAVQNKHTCSPQSSNRGHPIHGT*SGAHSC Trigger: ACAAGAATGAGCTCCTGACCATGTACCATGGATGGG...GTGGCCCCTGTTACTAGATTGTGGAGAGCATGTGTGCTTATTTTGTACTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACAAGGGGCTTCCAGGCATaGATACGGAGATCACACACA | + |
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Preference number: 4 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTRGFQA*IRRSHT Trigger: TGTGTGTGATCTCCGTATTCATGCCTGGAAGCCCCT...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCGCTCCTGTTTTCTCCTaGCACAACAACAATCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSAPVFS*HNNNPV Trigger: GACTGGATTGTTGTTGTGGCAGGAGAAAACAGGAGC...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | ATGTCCCATGTTGGTACTGCATGTTACAAAAAGACTTGCAGAACAGTTTTAAAAAGTGCGGAAGGGCTCTaGCATCTGGGAGGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: MSHVGTACYKKTCRTVLKSAEGL*HLGGTG Trigger: ACCTGTGCCTCCCAGATGGCAGAGCCCTTCCGCACT...TTTTAAAACTGTTCTGCAAGTCTTTTTGTAACATGCAGTACCAACATGGGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCACAATCCAGTCCCTTTaGATTGTGATCGCAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSTIQSL*IVIAVA Trigger: TGCCACTGCGATCACAATCCAAAGGGACTGGATTGT...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACACTGACTCCTCTACCTTaGGAGCAGCTTTTACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTLTPLP*EQLLQP Trigger: TGGCTGTAAAAGCTGCTCTCAAGGTAGAGGAGTCAG...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | CATGTAAGGAGAAATAACCATCTTTGCTGGCGATGGTTAGTTAGTGCTCCTAGCTCATGTCTGCTAATCTaGTCCTGTTTTCTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: HVRRNNHLCWRWLVSAPSSCLLI*SCFLLP Trigger: TGGCAGGAGAAAACAGGAGCAGATTAGCAGACATGA...GCTAGGAGCACTAACTAACCATCGCCAGCAAAGATGGTTATTTCTCCTTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCTCGCAGTGGCAGTACTaGCCAAATTTGCAATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSSQWQY*PNLQCL Trigger: CAAACATTGCAAATTTGGCCAGTACTGCCACTGCGA...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAAAGTACTCCACACACATaGACACCAAATTCCAACCGG | + |
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Preference number: 4 (lower is better) Translates to: TLTASPSSYFPMFTCKEKSTPHT*TPNSNR Trigger: CCGGTTGGAATTTGGTGTCCATGTGTGTGGAGTACT...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | CTTCCAGTTTCTACAATCACACTAATAACAAGCTTTAAGTCCTTCTGTACCACACAGCTGCTTCAGTTCTaGCTCCTCTACCTTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LPVSTITLITSFKSFCTTQLLQF*LLYLES Trigger: GCTCTCAAGGTAGAGGAGTCAGAACTGAAGCAGCTG...TGTGGTACAGAAGGACTTAAAGCTTGTTATTAGTGTGATTGTAGAAACTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACACAGAAACACAGACACTaGAAAGTGCCACATCCGATC | + |
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Preference number: 4 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTQKHRH*KVPHPI Trigger: GATCGGATGTGGCACTTTGCAGTGTCTGTGTTTCTG...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAAAGGTATTTTGGTAGTTaGGGACACTGGCTCCACATT | + |
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Preference number: 4 (lower is better) Translates to: TLTASPSSYFPMFTCKEKRYFGS*GHWLHI Trigger: AATGTGGAGCCAGTGTCCCCAACTACCAAAATACCT...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | GCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGTTCTCTCATTTACCAAAATAGTAAAAGCTTCAGGATTTaGGGCCAAGATGACCATGAT | + |
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Preference number: 4 (lower is better) Translates to: AAFLLVRCQVSSLIYQNSKSFRI*GQDDHD Trigger: ATCATGGTCATCTTGGCCCCAAATCCTGAAGCTTTT...ACTATTTTGGTAAATGAGAGAACTGACCTGGCACCTTACAAGCAGAAAAGCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCTTGCCCAGAGTCTTCTaGGCAAATCGGAAATACATA | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSLPRVF*ANRKYI Trigger: TATGTATTTCCGATTTGCCCAGAAGACTCTGGGCAA...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCTCAATTACATTTTCTTaGAGCAACTGTGTCACCGTC | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSSITFS*SNCVTV Trigger: GACGGTGACACAGTTGCTGCAAGAAAATGTAATTGA...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CAATGTTTACATGTAAGGAGAAATAACCATCTTTGCTGGCGATGGTTAGTTAGTGTAAGGACCCATCCATaGTACATGGTCAGGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QCLHVRRNNHLCWRWLVSVRTHP*YMVRSS Trigger: TGAGCTCCTGACCATGTACCATGGATGGGTCCTTAC...ACTAACTAACCATCGCCAGCAAAGATGGTTATTTCTCCTTACATGTAAACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CAATGCATGGCAGTCAGTCTCCATGAAAGTGCATCAAAAGTTAAGGCAATGTCCAGGATGTTGGTTAGCTaGTCAATCCTTCTAATGGTA | + |
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Preference number: 4 (lower is better) Translates to: QCMAVSLHESASKVKAMSRMLVS*SILLMV Trigger: TACCATTAGAAGGATTGACCAGCTAACCAACATCCT...GGACATTGCCTTAACTTTTGATGCACTTTCATGGAGACTGACTGCCATGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | CATGTAAGGAGAAATAACCATCTTTGCTGGCGATGGTTAGTTAGTGCTCCTAGCACCACAGCCAATGACTaGAGAACCAAATGTCATAAT | + |
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Preference number: 4 (lower is better) Translates to: HVRRNNHLCWRWLVSAPSTTAND*RTKCHN Trigger: ATTATGACATTTGGTTCTCCAGTCATTGGCTGTGGT...GCTAGGAGCACTAACTAACCATCGCCAGCAAAGATGGTTATTTCTCCTTACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAACAAGTTCACGGATGTTaGAGTCTTTCTCACCCATTA | + |
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Preference number: 4 (lower is better) Translates to: TLTASPSSYFPMFTCKEKQVHGC*SLSHPL Trigger: TAATGGGTGAGAAAGACTCCAACATCCGTGAACTTG...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR TCA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACATTCTCACCCATTAGATaGGTTCCCTCCAAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTFSPIR*VPSKGF Trigger: AAAACCTTTGGAGGGAACTCATCTAATGGGTGAGAA...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CCA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAAATTAAACAGGAAAGCTaGGCTAGTCCTGAGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: TLTASPSSYFPMFTCKEKIKQES*ASPENR Trigger: TCTATTCTCAGGACTAGCCCAGCTTTCCTGTTTAAT...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR GCA 90 bp | ACGCTGACTGCCTCTCCCTCTTCCTATTTTCCAATGTTTACATGTAAGGAGAAAGACATGTTGGACATATaGATTTCTGTTGTAAAGACG | + |
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Preference number: 4 (lower is better) Translates to: TLTASPSSYFPMFTCKEKDMLDI*ISVVKT Trigger: CGTCTTTACAACAGAAATGCATATGTCCAACATGTC...TTTCTCCTTACATGTAAACATTGGAAAATAGGAAGAGGGAGAGGCAGTCAGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| 3UTR CAA 72 bp | ATGAAAGTGCATCAAAAGTTAAGGCAATGTCCCATGTaGGTACTGCATGTTACAAAAAGACTTGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: MKVHQKLRQCPM*VLHVTKRLAEQ Trigger: CTGTTCTGCAAGTCTTTTTGTAACATGCAGTACCAACATGGGACATTGCCTTAACTTTTGATGCACTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| 3UTR CAA 72 bp | TATGAAGAGCCACCATACACACATTACTGTAATATTTaGCCCTTTCTGATGGTCAAAATGCAAAAGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: YEEPPYTHYCNI*PFLMVKMQKLF Trigger: GAATAACTTTTGCATTTTGACCATCAGAAAGGGCAAAATATTACAGTAATGTGTGTATGGTGGCTCTTCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | ATTTGCAGTCCTTTCTTAGTGTGGGCCGCTTTTCTGCTTGTAAGGTGCCAGGTCGGCACAGGTGGGCTCTaGTTCACATTCAAGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: ICSPFLVWAAFLLVRCQVGTGGL*FTFKFT Trigger: CGTGAACTTGAATGTGAACAAGAGCCCACCTGTGCC...GACCTGGCACCTTACAAGCAGAAAAGCGGCCCACACTAAGAAAGGACTGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | GTCATAATCTGGCCGACAGCCATGGGGGCCAGGATGTTGGTTAGCTaGTCAATCCTTCTAATGGTAGCATTCATGTCTGCTAATCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIIWPTAMGARMLVS*SILLMVAFMSANLL Trigger: GAGCAGATTAGCAGACATGAATGCTACCATTAGAAGGATTGACCAGCTAACCAACATCCTGGCCCCCATGGCTGTCGGCCAGATTATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | CATGGACACCAAATTCCAACCGGAAATAAAACCACAGCCAATGACTaGAGAACCAAATGTCATAATCTGGCCGACAGCCATGGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGHQIPTGNKTTAND*RTKCHNLADSHGGQ Trigger: CTGGCCCCCATGGCTGTCGGCCAGATTATGACATTTGGTTCTCCAGTCATTGGCTGTGGTTTTATTTCCGGTTGGAATTTGGTGTCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | GTTCCCTCCAAAGGTTTTGGCTCAGTATCTTTAGGTGAGGTCAGCTaGTTCAGTTCTGACTCCTCTACCTTGAGAGCAGCTTTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSKGFGSVSLGEVS*FSSDSSTLRAAFTA Trigger: GGCTGTAAAAGCTGCTCTCAAGGTAGAGGAGTCAGAACTGAAGCAGCTGACCTCACCTAAAGATACTGAGCCAAAACCTTTGGAGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | GAAATAAAACCACAGCCAATGACTGGAGAACCAAATGTCATAATCTaGCCGACAGCCATGGGGGCCAGGATGTTGGTTAGCTGGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: EIKPQPMTGEPNVII*PTAMGARMLVSWSI Trigger: GATTGACCAGCTAACCAACATCCTGGCCCCCATGGCTGTCGGCCAGATTATGACATTTGGTTCTCCAGTCATTGGCTGTGGTTTTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | GGGAGGCACAGGTGGGCTCTTGTTCACATTCAAGTTCACGGATGTTaGAGTCTTTCTCACCCATTAGATGAGTTCCCTCCAAAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRHRWALVHIQVHGC*SLSHPLDEFPPKVL Trigger: CAAAACCTTTGGAGGGAACTCATCTAATGGGTGAGAAAGACTCCAACATCCGTGAACTTGAATGTGAACAAGAGCCCACCTGTGCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | GGACACTGGCTCCACATTCACAAACCTAGAACGGATATCTTCAAATaGAGAAACAGACAGGTCCAAGGGGCTTCCAGGCATGAATACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHWLHIHKPRTDIFK*RNRQVQGASRHEYG Trigger: TCCGTATTCATGCCTGGAAGCCCCTTGGACCTGTCTGTTTCTCCATTTGAAGATATCCGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 90 bp | AAAACCATCATCAGGATGATTCCGCAGAGGATGACGGACACATTCTaGACCACCAGTGACGTCTGGGCCACTTTAAGTCTGGCATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KTIIRMIPQRMTDTF*TTSDVWATLSLAFL Trigger: TAAGAATGCCAGACTTAAAGTGGCCCAGACGTCACTGGTGGTTCAGAATGTGTCCGTCATCCTCTGCGGAATCATCCTGATGATGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | CGTCAAATCAAAGGACCAAAGACCGATTCTAGCAGCAATGACTCCTaGAAACAGCAGGCTGACAGAGACTATGGGGATGGGTTTAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: RQIKGPKTDSSSNDS*KQQADRDYGDGFST Trigger: AGTACTAAACCCATCCCCATAGTCTCTGTCAGCCTGCTGTTTGCAGGAGTCATTGCTGCTAGAATCGGTCTTTGGTCCTTTGATTTGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | CCAGGCATGAATACGGAGATCACACACAAGATTAAACAGGAAAGCTaGGCTAGTCCTGAGAATAGACCAGTCCGAACAAGGCCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGMNTEITHKIKQES*ASPENRPVRTRPHF Trigger: AAAATGTGGCCTTGTTCGGACTGGTCTATTCTCAGGACTAGCCCAGCTTTCCTGTTTAATCTTGTGTGTGATCTCCGTATTCATGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | TTGGATTGTGATCGCAGTGGCAGTACTGGCCAAATTTGCAATGTTTaGAATAGTGATGATCAGGATGTAGCAGACAGTAAGGACCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LDCDRSGSTGQICNV*NSDDQDVADSKDPS Trigger: GGATGGGTCCTTACTGTCTGCTACATCCTGATCATCACTATTGCAAACATTGCAAATTTGGCCAGTACTGCCACTGCGATCACAATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | CCAGTCCCTTTGGATTGTGATCGCAGTGGCAGTACTGGCCAAATTTaGAATGTTTGCAATAGTGATGATCAGGATGTAGCAGACAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVPLDCDRSGSTGQI*NVCNSDDQDVADSK Trigger: CTTACTGTCTGCTACATCCTGATCATCACTATTGCAAACATTGCAAATTTGGCCAGTACTGCCACTGCGATCACAATCCAAAGGGACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | TCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACAGACTCACTGATTTGCAGTTCTGACTCCTCTACCTaGAGAGCAGCTTTTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAQVSEGKMFYTDSLICSSDSST*RAAFTA Trigger: GGCTGTAAAAGCTGCTCTCAAGGTAGAGGAGTCAGA...ACTGCAAATCAGTGAGTCTGTATAGAACATTTTACCTTCACTGACTTGGGCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 90 bp | TCACATTCAAGTTCACGGATGTTGGAGTCTTTCTCACCCATTAGATaGGTTCCCTCCAAAGGTTTTGGCTCAGTATCTTTAGGTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSSRMLESFSPIR*VPSKGFGSVSLGEV Trigger: GACCTCACCTAAAGATACTGAGCCAAAACCTTTGGAGGGAACTCATCTAATGGGTGAGAAAGACTCCAACATCCGTGAACTTGAATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 90 bp | GGCAAATCGGAAATACATAAGATGTCCCATTGCCACAAAGGAGACTaGAATCAATACCAGCAAGCCAAAAGCTTCAGGATTTGGGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKSEIHKMSHCHKGD*NQYQQAKSFRIWGQ Trigger: TTGGCCCCAAATCCTGAAGCTTTTGGCTTGCTGGTATTGATTTCAGTCTCCTTTGTGGCAATGGGACATCTTATGTATTTCCGATTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | TTCTGTTGTAAAGACGGTCTCAGGTATTTTGGTAGTTGGGGACACTaGCTCCACATTCACAAACCTAGAACGGATATCTTCAAATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FCCKDGLRYFGSWGH*LHIHKPRTDIFKWR Trigger: TCTCCATTTGAAGATATCCGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCCCCAACTACCAAAATACCTGAGACCGTCTTTACAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | CATATGCATTTCTGTTGTAAAGACGGTCTCAGGTATTTTGGTAGTTaGGGACACTGGCTCCACATTCACAAACCTAGAACGGATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMHFCCKDGLRYFGS*GHWLHIHKPRTDIF Trigger: GAAGATATCCGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCCCCAACTACCAAAATACCTGAGACCGTCTTTACAACAGAAATGCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 90 bp | AGCAGGCTGACAGAGACTATGGGGATGGGTTTAGTACTCATCTCATaGACATTAGACATGTTGGACATATGCATTTCTGTTGTAAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SRLTETMGMGLVLIS*TLDMLDICISVVKT Trigger: CGTCTTTACAACAGAAATGCATATGTCCAACATGTCTAATGTCCATGAGATGAGTACTAAACCCATCCCCATAGTCTCTGTCAGCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | GCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGTTCTCTCATTTACCAAAATAGTGAGTTCTGCACACCATaGATAATGCCTCTTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAFLLVRCQVSSLIYQNSEFCTP*IMPLSD Trigger: ATCTGAAAGAGGCATTATCAATGGTGTGCAGAACTC...ACTATTTTGGTAAATGAGAGAACTGACCTGGCACCTTACAAGCAGAAAAGCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | ACAGAGATGACAAACACATCGGCCCAAGTCAGTGAAGGTAAAATGTTCTATACACAAACAAAAATCTGGTaGCCCAGAGTCTTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TEMTNTSAQVSEGKMFYTQTKIW*PRVFWA Trigger: TGCCCAGAAGACTCTGGGCAACCAGATTTTTGTTTG...TGTATAGAACATTTTACCTTCACTGACTTGGGCCGATGTGTTTGTCATCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCATGTTGGTACTGCATGTTACAAAAAGACTTGCAGAACAGTTTTAAAAACGGTCTCAGGTATTTaGGTAGTTGGGGACACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSHVGTACYKKTCRTVLKTVSGI*VVGDTG Trigger: GCCAGTGTCCCCAACTACCAAAATACCTGAGACCGT...TTTTAAAACTGTTCTGCAAGTCTTTTTGTAACATGCAGTACCAACATGGGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | GCCGCTTTTCTGCTTGTAAGGTGCCAGGTCAGTTCTCTCATTTACCAAAATAGTTTCAATTACATTTTCTaGCAGCAACTGTGTCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: AAFLLVRCQVSSLIYQNSFNYIF*QQLCHR Trigger: ACGGTGACACAGTTGCTGCAAGAAAATGTAATTGAA...ACTATTTTGGTAAATGAGAGAACTGACCTGGCACCTTACAAGCAGAAAAGCGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS-3UTR CAA 90 bp | CAATGTTTACATGTAAGGAGAAATAACCATCTTTGCTGGCGATGGTTAGTTAGTGGTAGAGGAGGAATTTaGCTGAGGTCAGGTAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCLHVRRNNHLCWRWLVSGRGGI*LRSGSL Trigger: CAAACTACCTGACCTCAGCAAAATTCCTCCTCTACC...ACTAACTAACCATCGCCAGCAAAGATGGTTATTTCTCCTTACATGTAAACATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | ATGGGTTTAGTACTCATCTCATGGACATTAGACATGTTGGACATATaGATTTCTGTTGTAAAGACGGTCTCAGGTATTTTGGTAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MGLVLISWTLDMLDI*ISVVKTVSGILVVG Trigger: CCCAACTACCAAAATACCTGAGACCGTCTTTACAACAGAAATGCATATGTCCAACATGTCTAATGTCCATGAGATGAGTACTAAACCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 90 bp | TGCACACCATTGATAATGCCTCTTTCAGATTCAATTACATTTTCTTaGAGCAACTGTGTCACCGTCAAATCAAAGGACCAAAGACCGATT | + |
|
Preference number: 5 (lower is better) Translates to: CTPLIMPLSDSITFS*SNCVTVKSKDQRPI Trigger: AATCGGTCTTTGGTCCTTTGATTTGACGGTGACACAGTTGCTGCAAGAAAATGTAATTGAATCTGAAAGAGGCATTATCAATGGTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CAA 90 bp | ATGTCCCATGTTGGTACTGCATGTTACAAAAAGACTTGCAGAACAGTTTTAAAAGTCAGGAGCTCATTCTaGTGTAGGAAAACCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: MSHVGTACYKKTCRTVLKVRSSF*CRKTII Trigger: GATGATGGTTTTCCTACACAAGAATGAGCTCCTGAC...TTTTAAAACTGTTCTGCAAGTCTTTTTGTAACATGCAGTACCAACATGGGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS-3UTR CAA 90 bp | CAATGTTTACATGTAAGGAGAAATAACCATCTTTGCTGGCGATGGTTAGTTAGTCCATTATTCCAGTTATaGCTGATGCTCCCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QCLHVRRNNHLCWRWLVSPLFQL*LMLPSK Trigger: TTTTGATGGGAGCATCAGCAATAACTGGAATAATGG...ACTAACTAACCATCGCCAGCAAAGATGGTTATTTCTCCTTACATGTAAACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS GCA 72 bp | GTCACCAATGATGGCTCCCAGGACCAGAACAGAGCCTaGCACCACCAGTCCATAGACAGCTGTCAAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VTNDGSQDQNRA*HHQSIDSCQEK Trigger: CTTCTCTTGACAGCTGTCTATGGACTGGTGGTGGCAGGCTCTGTTCTGGTCCTGGGAGCCATCATTGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | CATCCATCTCGGAAAGTGCGGAAGGGCTCTGCCATCTaGGAGGCACAGGTGGGCTCTTGTTCACATTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HPSRKVRKGSAI*EAQVGSCSHSS Trigger: ACTTGAATGTGAACAAGAGCCCACCTGTGCCTCCCAGATGGCAGAGCCCTTCCGCACTTTCCGAGATGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CAA 72 bp | GGTGAGGTCAGCTGCTTCAGTTCTGACTCCTCTACCTaGAGAGCAGCTTTTACAGCCAGAGCAGGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GEVSCFSSDSST*RAAFTARAGVF Trigger: GAAGACCCCTGCTCTGGCTGTAAAAGCTGCTCTCAAGGTAGAGGAGTCAGAACTGAAGCAGCTGACCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 72 bp | GTGAGGTCAGCTGCTTCAGTTCTGACTCCTCTACCTTaGGAGCAGCTTTTACAGCCAGAGCAGGGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRSAASVLTPLP*EQLLQPEQGSS Trigger: AGAAGACCCCTGCTCTGGCTGTAAAAGCTGCTCTCAAGGTAGAGGAGTCAGAACTGAAGCAGCTGACCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 72 bp | ATCAGGATGATTCCGCAGAGGATGACGGACACATTCTaGACCACCAGTGACGTCTGGGCCACTTTAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IRMIPQRMTDTF*TTSDVWATLSL Trigger: CAGACTTAAAGTGGCCCAGACGTCACTGGTGGTTCAGAATGTGTCCGTCATCCTCTGCGGAATCATCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS GCA 72 bp | AAAGGACCAAAGACCGATTCTAGCAGCAATGACTCCTaGAAACAGCAGGCTGACAGAGACTATGGGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: KGPKTDSSSNDS*KQQADRDYGDG Trigger: CCCATCCCCATAGTCTCTGTCAGCCTGCTGTTTGCAGGAGTCATTGCTGCTAGAATCGGTCTTTGGTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 72 bp | CAGTCCGAACAAGGCCACATTTTCGACGTAGCCAGGTaGAGGCCACAGTTCCCATTATTCCAGTTATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSEQGHIFDVAR*RPQFPLFQLLL Trigger: CAGCAATAACTGGAATAATGGGAACTGTGGCCTTCACCTGGCTACGTCGAAAATGTGGCCTTGTTCGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CAA 90 bp | GAGAGTGGCCAAGGTAGAGGAGGAATTTTGCTGAGGTCAGGTAGTTaGCTAAGGATCCACAGCATCCTTCCTGATGGGTTTGATCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ESGQGRGGILLRSGS*LRIHSILPDGFDLL Trigger: CAAGAGATCAAACCCATCAGGAAGGATGCTGTGGATCCTTAGCAAACTACCTGACCTCAGCAAAATTCCTCCTCTACCTTGGCCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027137.11 ENSMUST00000186804.2 ENSMUST00000187406.7 ENSMUST00000187420.7 |
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| CDS CAA 90 bp | CAGACAGTAAGGACCCATCCATGGTACATGGTCAGGAGCTCATTCTaGTGTAGGAAAACCATCATCAGGATGATTCCGCAGAGGATGACG | + |
|
Preference number: 6 (lower is better) Translates to: QTVRTHPWYMVRSSF*CRKTIIRMIPQRMT Trigger: CGTCATCCTCTGCGGAATCATCCTGATGATGGTTTTCCTACACAAGAATGAGCTCCTGACCATGTACCATGGATGGGTCCTTACTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CAA 90 bp | GAACCAAATGTCATAATCTGGCCGACAGCCATGGGGGCCAGGATGTaGGTTAGCTGGTCAATCCTTCTAATGGTAGCATTCATGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EPNVIIWPTAMGARM*VSWSILLMVAFMSA Trigger: AGCAGACATGAATGCTACCATTAGAAGGATTGACCAGCTAACCAACATCCTGGCCCCCATGGCTGTCGGCCAGATTATGACATTTGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | AGGTGGGCTCTTGTTCACATTCAAGTTCACGGATGTTaGAGTCTTTCTCACCCATTAGATGAGTTCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWALVHIQVHGC*SLSHPLDEFPP Trigger: TGGAGGGAACTCATCTAATGGGTGAGAAAGACTCCAACATCCGTGAACTTGAATGTGAACAAGAGCCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | CTCCACATTCACAAACCTAGAACGGATATCTTCAAATaGAGAAACAGACAGGTCCAAGGGGCTTCCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LHIHKPRTDIFK*RNRQVQGASRH Trigger: ATGCCTGGAAGCCCCTTGGACCTGTCTGTTTCTCCATTTGAAGATATCCGTTCTAGGTTTGTGAATGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | AATACGGAGATCACACACAAGATTAAACAGGAAAGCTaGGCTAGTCCTGAGAATAGACCAGTCCGAACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NTEITHKIKQES*ASPENRPVRTR Trigger: CCTTGTTCGGACTGGTCTATTCTCAGGACTAGCCCAGCTTTCCTGTTTAATCTTGTGTGTGATCTCCGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | AAAGACGGTCTCAGGTATTTTGGTAGTTGGGGACACTaGCTCCACATTCACAAACCTAGAACGGATATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KDGLRYFGSWGH*LHIHKPRTDIF Trigger: GAAGATATCCGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCCCCAACTACCAAAATACCTGAGACCGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | TTCTGTTGTAAAGACGGTCTCAGGTATTTTGGTAGTTaGGGACACTGGCTCCACATTCACAAACCTAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: FCCKDGLRYFGS*GHWLHIHKPRT Trigger: CGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCCCCAACTACCAAAATACCTGAGACCGTCTTTACAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CAA 90 bp | ATGTTGGACATATGCATTTCTGTTGTAAAGACGGTCTCAGGTATTTaGGTAGTTGGGGACACTGGCTCCACATTCACAAACCTAGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: MLDICISVVKTVSGI*VVGDTGSTFTNLER Trigger: CCGTTCTAGGTTTGTGAATGTGGAGCCAGTGTCCCCAACTACCAAAATACCTGAGACCGTCTTTACAACAGAAATGCATATGTCCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 72 bp | GGTGAAGGCCACAGTTCCCATTATTCCAGTTATTGCTaGTGCTCCCATCAAAATACTAAGGATGGATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GEGHSSHYSSYC*CSHQNTKDGST Trigger: AGTGGATCCATCCTTAGTATTTTGATGGGAGCATCAGCAATAACTGGAATAATGGGAACTGTGGCCTTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS TCA 72 bp | AGTTCACGGATGTTGGAGTCTTTCTCACCCATTAGATaGGTTCCCTCCAAAGGTTTTGGCTCAGTATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSRMLESFSPIR*VPSKGFGSVSL Trigger: TAAAGATACTGAGCCAAAACCTTTGGAGGGAACTCATCTAATGGGTGAGAAAGACTCCAACATCCGTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CCA 72 bp | GTAACTTCTTTTTCATCAGGACCACAAACAAAAATCTaGTTGCCCAGAGTCTTCTGGGCAAATCGGAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: VTSFSSGPQTKI*LPRVFWANRKY Trigger: GTATTTCCGATTTGCCCAGAAGACTCTGGGCAACCAGATTTTTGTTTGTGGTCCTGATGAAAAAGAAGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
||
| CDS CAA 90 bp | CTGCACACCATTGATAATGCCTCTTTCAGATTCAATTACATTTTCTaGCAGCAACTGTGTCACCGTCAAATCAAAGGACCAAAGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: LHTIDNASFRFNYIF*QQLCHRQIKGPKTD Trigger: ATCGGTCTTTGGTCCTTTGATTTGACGGTGACACAGTTGCTGCAAGAAAATGTAATTGAATCTGAAAGAGGCATTATCAATGGTGTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS CAA 90 bp | TCATCTGTAACTTCTTTTTCATCAGGACCACAAACAAAAATCTGGTaGCCCAGAGTCTTCTGGGCAAATCGGAAATACATAAGATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSVTSFSSGPQTKIW*PRVFWANRKYIRCP Trigger: GGGACATCTTATGTATTTCCGATTTGCCCAGAAGACTCTGGGCAACCAGATTTTTGTTTGTGGTCCTGATGAAAAAGAAGTTACAGATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS CAA 90 bp | ACTATGGGGATGGGTTTAGTACTCATCTCATGGACATTAGACATGTaGGACATATGCATTTCTGTTGTAAAGACGGTCTCAGGTATTTTG | + |
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Preference number: 6 (lower is better) Translates to: TMGMGLVLISWTLDM*DICISVVKTVSGIL Trigger: CAAAATACCTGAGACCGTCTTTACAACAGAAATGCATATGTCCAACATGTCTAATGTCCATGAGATGAGTACTAAACCCATCCCCATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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| CDS CAA 72 bp | ATTGATAATGCCTCTTTCAGATTCAATTACATTTTCTaGCAGCAACTGTGTCACCGTCAAATCAAAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: IDNASFRFNYIF*QQLCHRQIKGP Trigger: TGGTCCTTTGATTTGACGGTGACACAGTTGCTGCAAGAAAATGTAATTGAATCTGAAAGAGGCATTATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027137.11 |
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