Pregenerated sensors for SLC3A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010095Ensembl transcript IDs: ENSMUST00000010239.6, ENSMUST00000170157.8, ENSMUST00000205377.2, ENSMUST00000205463.2, ENSMUST00000205538.2, ENSMUST00000206560.2, ENSMUST00000206598.2, ENSMUST00000206797.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATaGGGTATCCACTGGGTACTGGGGATCGCAGTCCTGTCTATATGG | + |
|
Preference number: 1 (lower is better) Translates to: SLRKQRVCLVGFFWR*GIHWVLGIAVLSIW Trigger: CCATATAGACAGGACTGCGATCCCCAGTACCCAGTGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| 3UTR CCA 90 bp | CCACCCTTTTTCTTAAAGACTGTGCTAAGAGAGATAAGGAAGAGTTaGCAATTCCCAAGATTCTTGGGCCAGAGCGAGGAGGTGTGGTTA | + |
|
Preference number: 1 (lower is better) Translates to: PPFFLKTVLREIRKS*QFPRFLGQSEEVWL Trigger: TAACCACACCTCCTCGCTCTGGCCCAAGAATCTTGGGAATTGCCAACTCTTCCTTATCTCTCTTAGCACAGTCTTTAAGAAAAAGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTAACTGGCTGCGACTATaGCAGGGGCAGGGAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFNWLRL*QGQGGA Trigger: TGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTT...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTCTGTCTACAACTGGCTaGGACTATGGCAGGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFLSTTG*DYGRGR Trigger: CCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAG...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| 3UTR CCA 72 bp | TTCTTAAAGACTGTGCTAAGAGAGATAAGGAAGAGTTaGCAATTCCCAAGATTCTTGGGCCAGAGCGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLKTVLREIRKS*QFPRFLGQSEE Trigger: CTCCTCGCTCTGGCCCAAGAATCTTGGGAATTGCCAACTCTTCCTTATCTCTCTTAGCACAGTCTTTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGACATCAAGCCCCGTCTaGGCGCTGGGCGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWTSSPV*ALGGWR Trigger: CCGCCAGCCGCCCAGCGCGCAGACGGGGCTTGATGT...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTGGCTGGCAGGCTTATaGCAGCAGGGAGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFWLAGL*QQGGWR Trigger: CCTCCAACCTCCCTGCTGGCATAAGCCTGCCAGCCA...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCTCAGCCGCCGGAACTaGGTAAGGAGGGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWLSRRN*VRREPG Trigger: CCCTGGCTCCCTCCTTACCCAGTTCCGGCGGCTGAG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTGCCAGCAGGGAGGTTaGAGGCCCCTAGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRCQQGG*RPLAWL Trigger: CAGCCAGGCTAGGGGCCTCCAACCTCCCTGCTGGCA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTCCACTTCGGTGTCCTaGCTCATGGTGCCTGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFSTSVS*LMVPES Trigger: CGACTCAGGCACCATGAGCCAGGACACCGAAGTGGA...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAACGTCCTCCGCCACCTTaGTCTTCACCAGACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WNSCLQLAATMAGAGRSKRPPPP*SSPDRS Trigger: AGAACGGTCTGGTGAAGATCAAGGTGGCGGAGGACG...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCCAGGAAGGGCACCCTaGAGGCCAAGCTCATCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVPGRAP*RPSSSP Trigger: CGGGGATGAGCTTGGCCTTCAGGGTGCCCTTCCTGG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCCTGAAGGTCGCCGATaGGGTAGAGGGCGCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWPEGRR*GRGRPC Trigger: ACAAGGGCGCCCTCTACCGCATCGGCGACCTTCAGG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCTCAGCCGCCGGAACTaGGTAAGGAGGGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVLSRRN*VRREPG Trigger: CCCTGGCTCCCTCCTTACCCAGTTCCGGCGGCTGAG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTGGAGAAGAGGTCAGGTaGGGAAGACAGTGCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFGEEVR*GRQCME Trigger: TTCCATGCACTGTCTTCCTCACCTGACCTCTTCTCC...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGGCGAGGAGTCCTGCTTaGGACACACTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWARSPA*DTLQLH Trigger: GTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGC...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTGGCTGGCAGGCTTATaGCAGCAGGGAGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRWLAGL*QQGGWR Trigger: CCTCCAACCTCCCTGCTGGCATAAGCCTGCCAGCCA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTGGCTGGCAGGCTTATaGCAGCAGGGAGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWWLAGL*QQGGWR Trigger: CCTCCAACCTCCCTGCTGGCATAAGCCTGCCAGCCA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAACGTCCGCTGCATTCATaGGCTGCTTCTCCGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WNSCLQLAATMAGAGRSKRPLHS*AASPVL Trigger: TAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACG...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTTGCCAGCAGGGAGGTTaGAGGCCCCTAGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCCQQGG*RPLAWL Trigger: CAGCCAGGCTAGGGGCCTCCAACCTCCCTGCTGGCA...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTCGGTGTCCTGGCTCATaGTGCCTGAGTCGCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCRCPGS*CLSRPL Trigger: CAGCGGGCGACTCAGGCACCATGAGCCAGGACACCG...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGCGTCCTCCGCCACCTTaGTCTTCACCAGACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRRPPPP*SSPDRS Trigger: AGAACGGTCTGGTGAAGATCAAGGTGGCGGAGGACG...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGGCTACAATGTCAGCCTaGGCAGGGAGGAACCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWATMSA*AGRNHA Trigger: TGCGTGGTTCCTCCCTGCTCAGGCTGACATTGTAGC...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCACCAGGAAGGGCACCCTaGAGGCCAAGCTCATCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPPGRAP*RPSSSP Trigger: CGGGGATGAGCTTGGCCTTCAGGGTGCCCTTCCTGG...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCGACACACTCCAGCTaGACCATTGGCTGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVATHSS*TIGCQW Trigger: CCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGC...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCGAGGAGTCCTGCTTaGGACACACTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVARSPA*DTLQLH Trigger: GTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGC...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| 3UTR CAA 72 bp | CCTCACCAAAGAGTAAAGAAGGGAAGCCCCAGGCCCTaGGCAGTATGCAGTCTTCAACTCACCCCACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHQRVKKGSPRP*AVCSLQLTPPF Trigger: AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTTCTTTACTCTTTGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCTACAATGTCAGCCTaGGCAGGGAGGAACCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVATMSA*AGRNHA Trigger: TGCGTGGTTCCTCCCTGCTCAGGCTGACATTGTAGC...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCACCTGAAGGTCGCCGATaGGGTAGAGGGCGCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPPEGRR*GRGRPC Trigger: ACAAGGGCGCCCTCTACCGCATCGGCGACCTTCAGG...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCGTCCGCTGCATTCATaGGCTGCTTCTCCGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWRPLHS*AASPVL Trigger: TAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTTGACAGGTAGGAGCTaGTCAACAGCAGGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRLTGRS*STAGRW Trigger: CCAGCGACCTGCTGTTGACCAGCTCCTACCTGTCAA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTTGACAGGTAGGAGCTaGTCAACAGCAGGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWLTGRS*STAGRW Trigger: CCAGCGACCTGCTGTTGACCAGCTCCTACCTGTCAA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGAAGTTTAGCGCTGGCTaGCAGGCTTATGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWKFSAG*QAYASR Trigger: CCTGCTGGCATAAGCCTGCCAGCCAGCGCTAAACTT...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGGGAGAAGAGGTCAGGTaGGGAAGACAGTGCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRGEEVR*GRQCME Trigger: TTCCATGCACTGTCTTCCTCACCTGACCTCTTCTCC...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCAGCGACACACTCCAGCTaGACCATTGGCTGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPATHSS*TIGCQW Trigger: CCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGC...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGCTCCAGCTGCACCATTaGCTGCCAGTGGCATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRLQLHH*LPVAFK Trigger: TTTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAG...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGAAGTTTAGCGCTGGCTaGCAGGCTTATGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVKFSAG*QAYASR Trigger: CCTGCTGGCATAAGCCTGCCAGCCAGCGCTAAACTT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTCCTTCTGGTTCTTGTaGATTGGGCCTAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRSFWFL*IGPNTR Trigger: CCTGGTGTTAGGCCCAATTCACAAGAACCAGAAGGA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTCCTTCTGGTTCTTGTaGATTGGGCCTAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWSFWFL*IGPNTR Trigger: CCTGGTGTTAGGCCCAATTCACAAGAACCAGAAGGA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAACACTTAAGTTCTTGGTaGTATTCTGCCACTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WNSCLQLAATMAGAGRSKHLSSW*YSATQP Trigger: TGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTG...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGCAGTACGCTCCCCAGTaGAAGTGGAATTTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRQYAPQ*KWNLTG Trigger: ACCTGTCAAATTCCACTTTCACTGGGGAGCGTACTG...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCAGTACGCTCCCCAGTaGAAGTGGAATTTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWQYAPQ*KWNLTG Trigger: ACCTGTCAAATTCCACTTTCACTGGGGAGCGTACTG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGGAGAAGAGGTCAGGTaGGGAAGACAGTGCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVGEEVR*GRQCME Trigger: TTCCATGCACTGTCTTCCTCACCTGACCTCTTCTCC...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAACTTCCTTCATTTTGGTaGCTACAATGTCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WNSCLQLAATMAGAGRSKLPSFW*LQCQPE Trigger: CTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAG...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCTCCAGCTGCACCATTaGCTGCCAGTGGCATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVLQLHH*LPVAFK Trigger: TTTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGAAAAACAGGAGTCCCTaGCAGAGTGAAGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWKNRSP*QSEEQQ Trigger: CTGCTGCTCTTCACTCTGCCAGGGACTCCTGTTTTT...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGCCAGGGTCTTCATTCTaGCCCTTCACTGTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRPGSSF*PFTVML Trigger: CAACATGACAGTGAAGGGCCAGAATGAAGACCCTGG...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCCAGGGTCTTCATTCTaGCCCTTCACTGTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWPGSSF*PFTVML Trigger: CAACATGACAGTGAAGGGCCAGAATGAAGACCCTGG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCTCAAGTACTCCAGATaGCTCTTCAGACCAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWLKYSR*LFRPAM Trigger: CATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTCTCCAGCTGCACCATTaGCTGCCAGTGGCATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCLQLHH*LPVAFK Trigger: TTTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAG...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGAAAAACAGGAGTCCCTaGCAGAGTGAAGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVKNRSP*QSEEQQ Trigger: CTGCTGCTCTTCACTCTGCCAGGGACTCCTGTTTTT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCCAGGGTCTTCATTCTaGCCCTTCACTGTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVPGSSF*PFTVML Trigger: CAACATGACAGTGAAGGGCCAGAATGAAGACCCTGG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAAAGGTCCAAAATGATGTaGATGCTCTTTTTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WNSCLQLAATMAGAGRSKRSKMM*MLFFLA Trigger: TGCCAAGAAAAAGAGCATTCACATCATTTTGGACCT...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGCACTTAAGTTCTTGGTaGTATTCTGCCACTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRHLSSW*YSATQP Trigger: TGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTG...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGATGTTGACAATTTGCTaGAGGTCAGAGGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRMLTIC*RSEDSV Trigger: GACTGAGTCCTCTGACCTGCAGCAAATTGTCAACAT...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTGAATGCTCTTTTTCTTaGCACTTTGTAGAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFECSFS*HFVEGL Trigger: AAGACCTTCTACAAAGTGCCAAGAAAAAGAGCATTC...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCTTCCTTCATTTTGGTaGCTACAATGTCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWLPSFW*LQCQPE Trigger: CTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGGAGCTTCCTTCATTTTaGTGGCTACAATGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWELPSF*WLQCQP Trigger: AGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTC...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTCAGGTCGGTTTCATTaGTTTCATCCTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWSGRFH*FHPSGS Trigger: AGAACCAGAAGGATGAAATCAATGAAACCGACCTGA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCACTTAAGTTCTTGGTaGTATTCTGCCACTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVHLSSW*YSATQP Trigger: TGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTGGATTCAAGTATGTTaGCAATTTGCTGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRWIQVC*QFAAGQ Trigger: CTGACCTGCAGCAAATTGTCAACATACTTGAATCCA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGAGTGAAAGTGGAATTTaGCAGGTAGGAGCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVSESGI*QVGAGQ Trigger: TTGACCAGCTCCTACCTGTCAAATTCCACTTTCACT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTTCTTGGTGATATTCTaGCACTCAGCCAAGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGRLESKRPGENKGGWFLVIF*HSAKYK Trigger: CTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGATGTTGACAATTTGCTaGAGGTCAGAGGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVMLTIC*RSEDSV Trigger: GACTGAGTCCTCTGACCTGCAGCAAATTGTCAACAT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTCTCAAGTACTCCAGATaGCTCTTCAGACCAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCLKYSR*LFRPAM Trigger: CATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAG...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGAGCTTCCTTCATTTTaGTGGCTACAATGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVELPSF*WLQCQP Trigger: AGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTC...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCAAAAAACAGGAGTCCCTaGCAGAGTGAAGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPKNRSP*QSEEQQ Trigger: CTGCTGCTCTTCACTCTGCCAGGGACTCCTGTTTTT...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGTGGATTCAAGTATGTTaGCAATTTGCTGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVWIQVC*QFAAGQ Trigger: CTGACCTGCAGCAAATTGTCAACATACTTGAATCCA...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGTTCTTGGTGATATTCTaGCACTCAGCCAAGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVFLVIF*HSAKYK Trigger: CTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAA...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGAGGTCCAAAATGATGTaGATGCTCTTTTTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVRSKMM*MLFFLA Trigger: TGCCAAGAAAAAGAGCATTCACATCATTTTGGACCT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTTGGATTCAAGTATGTTaGCAATTTGCTGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCWIQVC*QFAAGQ Trigger: CTGACCTGCAGCAAATTGTCAACATACTTGAATCCA...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCAATGTTGACAATTTGCTaGAGGTCAGAGGACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPMLTIC*RSEDSV Trigger: GACTGAGTCCTCTGACCTGCAGCAAATTGTCAACAT...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGTCTTTAAAATCTTCCTaGGAGCCCAAAGTGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: NKERKTRIQKAWGEQRRVSLKSS*EPKVGL Trigger: TAATCCCACTTTGGGCTCCCAGGAAGATTTTAAAGA...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CCA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGGAATGCTCTTTTTCTTaGCACTTTGTAGAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRECSFS*HFVEGL Trigger: AAGACCTTCTACAAAGTGCCAAGAAAAAGAGCATTC...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGAAGCAAAGGGTTTGTCTTGTTGGCTTTTTCTGGAGATGGGGTATCCATTCTTGGTGATATTCTaGCACTCAGCCAAGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKEAKGLSCWLFLEMGYPFLVIF*HSAKYK Trigger: CTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAA...TGGATACCCCATCTCCAGAAAAAGCCAACAAGACAAACCCTTTGCTTCCTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS CCA 90 bp | GTGTCCTGGCTCATGGTGCCTGAGTCGCCCGCTGCGCTGACAACCTaGACATCAAGCCCCGTCTGCGCGCTGGGCGGCTGGCGGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: VSWLMVPESPAALTT*TSSPVCALGGWRGT Trigger: GGTTCCCCGCCAGCCGCCCAGCGCGCAGACGGGGCTTGATGTCCAGGTTGTCAGCGCAGCGGGCGACTCAGGCACCATGAGCCAGGACAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS TCA 90 bp | CCACTTCGGTGTCCTGGCTCATGGTGCCTGAGTCGCCCGCTGCGCTaGCAACCTGGACATCAAGCCCCGTCTGCGCGCTGGGCGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLRCPGSWCLSRPLR*QPGHQAPSARWAAG Trigger: GCCAGCCGCCCAGCGCGCAGACGGGGCTTGATGTCCAGGTTGTCAGCGCAGCGGGCGACTCAGGCACCATGAGCCAGGACACCGAAGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS GCA 90 bp | CTATGCCTCCCGCATCCCGGCCTACAAAGGCCTGAAGGTCGCCGATaGGGTAGAGGGCGCCCTTGTGCCACCACCTCTGTACAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLPHPGLQRPEGRR*GRGRPCATTSVQAA Trigger: AGCTGCCTGTACAGAGGTGGTGGCACAAGGGCGCCCTCTACCGCATCGGCGACCTTCAGGCCTTTGTAGGCCGGGATGCGGGAGGCATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS GCA 90 bp | CCGTTCTTCTCCCCGGCCGCCGCCCCGTCCGCTGCATTCATGGGCTaGTTCTCCGGTTCTAGCTCGTTCAGCTCCACATCTTTCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFFSPAAAPSAAFMG*FSGSSSFSSTSFMS Trigger: GGACATGAAAGATGTGGAGCTGAACGAGCTAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACGGGGCGGCGGCCGGGGAGAAGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS CCA 90 bp | CCAGACCGTTCTTCTCCCCGGCCGCCGCCCCGTCCGCTGCATTCATaGGCTGCTTCTCCGGTTCTAGCTCGTTCAGCTCCACATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PDRSSPRPPPRPLHS*AASPVLARSAPHLS Trigger: TGAAAGATGTGGAGCTGAACGAGCTAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACGGGGCGGCGGCCGGGGAGAAGAACGGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS TCA 90 bp | GGTTGGAGGCCCCTAGCCTGGCTGACCGGCCCGAATCTCGGAAGTTaGGCACCACCAGGTAACGCTCATTCTGGTCCCAGTGTCGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: GWRPLAWLTGPNLGS*APPGNAHSGPSVVC Trigger: ACATACGACACTGGGACCAGAATGAGCGTTACCTGGTGGTGCTCAACTTCCGAGATTCGGGCCGGTCAGCCAGGCTAGGGGCCTCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | CCTTCAGGGTGCTCAAGTACTCCAGATGGCTCTTCAGACCAGCTATaGCTCCCGCATCCCGGCCTACAAAGGCCTGAAGGTCGCCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGCSSTPDGSSDQL*LPHPGLQRPEGRRC Trigger: GCATCGGCGACCTTCAGGCCTTTGTAGGCCGGGATGCGGGAGGCATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAGCACCCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS CCA 90 bp | AACAGAGAGCGCTCCTTACCCCGAAGGTCACTCAGCCGCCGGAACTaGGTAAGGAGGGAGCCAGGGTCTTCATTCTGGCCCTTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRERSLPRRSLSRRN*VRREPGSSFWPFTV Trigger: GACAGTGAAGGGCCAGAATGAAGACCCTGGCTCCCTCCTTACCCAGTTCCGGCGGCTGAGTGACCTTCGGGGTAAGGAGCGCTCTCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 90 bp | AGGTCTTGGGATGTGAAAGATGCTGGACTCATTCCACGGCATGAGTaGGGCCTTCGCAGGCTGTCCAGGAAGGGCACCCTGAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSWDVKDAGLIPRHE*GLRRLSRKGTLKAK Trigger: CTTGGCCTTCAGGGTGCCCTTCCTGGACAGCCTGCGAAGGCCCCACTCATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS TCA 90 bp | TTACAGGTCTTGGGATGTGAAAGATGCTGGACTCATTCCACGGCATaGGTGGGGCCTTCGCAGGCTGTCCAGGAAGGGCACCCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQVLGCERCWTHSTA*VGPSQAVQEGHPEG Trigger: GCCTTCAGGGTGCCCTTCCTGGACAGCCTGCGAAGGCCCCACTCATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 90 bp | CCTAACACCAGGCCCTTCACCTTCAGGGTGCTCAAGTACTCCAGATaGCTCTTCAGACCAGCTATGCCTCCCGCATCCCGGCCTACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNTRPFTFRVLKYSR*LFRPAMPPASRPTK Trigger: CTTTGTAGGCCGGGATGCGGGAGGCATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAGCACCCTGAAGGTGAAGGGCCTGGTGTTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS CCA 90 bp | TCTAGCTCGTTCAGCTCCACATCTTTCATGTCCACTTCGGTGTCCTaGCTCATGGTGCCTGAGTCGCCCGCTGCGCTGACAACCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSFSSTSFMSTSVS*LMVPESPAALTTWT Trigger: TGTCCAGGTTGTCAGCGCAGCGGGCGACTCAGGCACCATGAGCCAGGACACCGAAGTGGACATGAAAGATGTGGAGCTGAACGAGCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGATGCCAGCAGGGAGGTaGGAGGCCCCTAGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRMPAGR*EAPSLA Trigger: AGCCAGGCTAGGGGCCTCCAACCTCCCTGCTGGCAT...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGATGCCAGCAGGGAGGTaGGAGGCCCCTAGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRRGRLESKRPGENKGGWMPAGR*EAPSLA Trigger: AGCCAGGCTAGGGGCCTCCAACCTCCCTGCTGGCAT...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | GAGCAGCAGCTGGTAGAGTCGGAGAAGATGGTCCGGTATAAAGTCTaGGAGGAGTCCTGCTTGCGACACACTCCAGCTGCACCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQQLVESEKMVRYKV*EESCLRHTPAAPLA Trigger: AGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTTTATACCGGACCATCTTCTCCGACTCTACCAGCTGCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | GGTTCTTGTGAATTGGGCCTAACACCAGGCCCTTCACCTTCAGGGTaGTCAAGTACTCCAGATGGCTCTTCAGACCAGCTATGCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GSCELGLTPGPSPSG*SSTPDGSSDQLCLP Trigger: CGGGAGGCATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAGCACCCTGAAGGTGAAGGGCCTGGTGTTAGGCCCAATTCACAAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205463.2 ENSMUST00000206797.2 |
||
| CDS GCA 90 bp | GTAGAGTCGGAGAAGATGGTCCGGTATAAAGTCTGCGAGGAGTCCTaGTTGCGACACACTCCAGCTGCACCATTGGCTGCCAGTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VESEKMVRYKVCEES*LRHTPAAPLAASGI Trigger: AATGCCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTTTATACCGGACCATCTTCTCCGACTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | TGGAATAGCTGTCTACAACTGGCTGCGACTATGGCAGGGGCAGGGAGGAGCAAAACTCCAGCTGCACCATaGGCTGCCAGTGGCATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WNSCLQLAATMAGAGRSKTPAAP*AASGIQ Trigger: TTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGT...TTTGCTCCTCCCTGCCCCTGCCATAGTCGCAGCCAGTTGTAGACAGCTATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGAAGCCCCAGGCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTCCCTTCACTGTCATGTaGAGGCTTACAGGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KGSPRPLAVCSLQLTPPFPFTVM*RLTGLG Trigger: CCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGG...AAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGCCTGGGGCTTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTATGCCAGCAGGGAGGTaGGAGGCCCCTAGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCMPAGR*EAPSLA Trigger: AGCCAGGCTAGGGGCCTCCAACCTCCCTGCTGGCAT...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS CCA 90 bp | CCACACCGTCCTGCAACCAAGAACTCAGAGCTTCCTTCATTTTGGTaGCTACAATGTCAGCCTGAGCAGGGAGGAACCACGCATTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHRPATKNSELPSFW*LQCQPEQGGTTHSG Trigger: GCCAGAATGCGTGGTTCCTCCCTGCTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTCTGAGTTCTTGGTTGCAGGACGGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 |
||
| CDS-3UTR CAA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTCGTCCTCCGCCACCTaGATCTTCACCAGACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRSSSAT*IFTRPF Trigger: GAACGGTCTGGTGAAGATCAAGGTGGCGGAGGACGA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS TCA 90 bp | TTCTGGCCCTTCACTGTCATGTTGAGGCTTACAGGTCTTGGGATGTaGAAGATGCTGGACTCATTCCACGGCATGAGTGGGGCCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FWPFTVMLRLTGLGM*KMLDSFHGMSGAFA Trigger: TGCGAAGGCCCCACTCATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGGCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGTCGTCCTCCGCCACCTaGATCTTCACCAGACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKERKTRIQKAWGEQRRVSSSAT*IFTRPF Trigger: GAACGGTCTGGTGAAGATCAAGGTGGCGGAGGACGA...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGACTCCAGCTGCACCATaGGCTGCCAGTGGCATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRRGRLESKRPGENKGGWTPAAP*AASGIQ Trigger: TTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGT...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGACTCCAGCTGCACCATaGGCTGCCAGTGGCATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRTPAAP*AASGIQ Trigger: TTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGT...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 90 bp | CATCCACACCGTCCTGCAACCAAGAACTCAGAGCTTCCTTCATTTTaGTGGCTACAATGTCAGCCTGAGCAGGGAGGAACCACGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPHRPATKNSELPSF*WLQCQPEQGGTTHS Trigger: AGAATGCGTGGTTCCTCCCTGCTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTCTGAGTTCTTGGTTGCAGGACGGTGTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 |
||
| CDS CCA 90 bp | AAGTCTGCGAGGAGTCCTGCTTGCGACACACTCCAGCTGCACCATTaGCTGCCAGTGGCATTCAAAAACCTAGTGACTAGGGATTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSARSPACDTLQLHH*LPVAFKNLVTRDSV Trigger: TACTGAATCCCTAGTCACTAGGTTTTTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 90 bp | GTCTTCATTCTGGCCCTTCACTGTCATGTTGAGGCTTACAGGTCTTaGGATGTGAAAGATGCTGGACTCATTCCACGGCATGAGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFILALHCHVEAYRS*DVKDAGLIPRHEWG Trigger: GCCCCACTCATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGGCCAGAATGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTCTGGTTCTTGTGAATaGGGCCTAACACCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRRGRLESKRPGENKGGWSGSCE*GLTPGP Trigger: AGGGCCTGGTGTTAGGCCCAATTCACAAGAACCAGA...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGCCCTTCACTGTCATGTaGAGGCTTACAGGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRRGRLESKRPGENKGGWPFTVM*RLTGLG Trigger: CCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGG...CCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | CTGGTCAACAGCAGGTCGCTGGTGGATTCAAGTATGTTGACAATTTaGTGCAGGTCAGAGGACTCAGTCCCTGCAATCAAAAGCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVNSRSLVDSSMLTI*CRSEDSVPAIKSLS Trigger: GGACAGGCTTTTGATTGCAGGGACTGAGTCCTCTGACCTGCAGCAAATTGTCAACATACTTGAATCCACCAGCGACCTGCTGTTGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGTCTGGTTCTTGTGAATaGGGCCTAACACCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NKERKTRIQKAWGEQRRVSGSCE*GLTPGP Trigger: AGGGCCTGGTGTTAGGCCCAATTCACAAGAACCAGA...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGCCCTTCACTGTCATGTaGAGGCTTACAGGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKERKTRIQKAWGEQRRVPFTVM*RLTGLG Trigger: CCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGG...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | GTCAACAGCAGGTCGCTGGTGGATTCAAGTATGTTGACAATTTGCTaGAGGTCAGAGGACTCAGTCCCTGCAATCAAAAGCCTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNSRSLVDSSMLTIC*RSEDSVPAIKSLSS Trigger: TGAGGACAGGCTTTTGATTGCAGGGACTGAGTCCTCTGACCTGCAGCAAATTGTCAACATACTTGAATCCACCAGCGACCTGCTGTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGAAGTATGTTGACAATTaGCTGCAGGTCAGAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRKYVDN*LQVRGL Trigger: GAGTCCTCTGACCTGCAGCAAATTGTCAACATACTT...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS TCA 90 bp | ATCTGTTTCAGGTCGGTTTCATTGATTTCATCCTTCTGGTTCTTGTaGATTGGGCCTAACACCAGGCCCTTCACCTTCAGGGTGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ICFRSVSLISSFWFL*IGPNTRPFTFRVLK Trigger: CTTGAGCACCCTGAAGGTGAAGGGCCTGGTGTTAGGCCCAATTCACAAGAACCAGAAGGATGAAATCAATGAAACCGACCTGAAACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205463.2 ENSMUST00000206797.2 |
||
| CDS-3UTR CAA 90 bp | AATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGGTAGGTTCTGCATAGGAAGGTCCTCACTTAAGTTCTaGGTGATATTCTGCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NPKGLGRTKEGGRFCIGRSSLKF*VIFCHS Trigger: TGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGA...CCTTCCTATGCAGAACCTACCACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGGAGAGGAAGACTAGAATCCAAAAGGCCTGGGGAGAACAAAGGAGGGTGAAGTATGTTGACAATTaGCTGCAGGTCAGAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NKERKTRIQKAWGEQRRVKYVDN*LQVRGL Trigger: GAGTCCTCTGACCTGCAGCAAATTGTCAACATACTT...CACCCTCCTTTGTTCTCCCCAGGCCTTTTGGATTCTAGTCTTCCTCTCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS TCA 90 bp | ACTCAGTCCCTGCAATCAAAAGCCTGTCCTCACTTAAGTTCTTGGTaGTATTCTGCCACTCAGCCAAGTACAAGGGTGCATTCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQSLQSKACPHLSSW*YSATQPSTRVHSSA Trigger: AGCTGATGAATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTTGATTGCAGGGACTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS GCA 90 bp | CCTGCAATCAAAAGCCTGTCCTCACTTAAGTTCTTGGTGATATTCTaGCACTCAGCCAAGTACAAGGGTGCATTCATCAGCTTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PAIKSLSSLKFLVIF*HSAKYKGAFISFPT Trigger: TGTGGGAAAGCTGATGAATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTTGATTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGGCAGTATGCAGTCTTCAACTCACCCCACCCTTTTTCTTAAAGACTGTAAGTATGTTGACAATTaGCTGCAGGTCAGAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGSMQSSTHPTLFLKDCKYVDN*LQVRGL Trigger: GAGTCCTCTGACCTGCAGCAAATTGTCAACATACTT...ACAGTCTTTAAGAAAAAGGGTGGGGTGAGTTGAAGACTGCATACTGCCAAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS GCA 72 bp | CCCGCTGCGCTGACAACCTGGACATCAAGCCCCGTCTaGGCGCTGGGCGGCTGGCGGGGAACCGAGACACCG | + |
|
Preference number: 6 (lower is better) Translates to: PAALTTWTSSPV*ALGGWRGTETP Trigger: CGGTGTCTCGGTTCCCCGCCAGCCGCCCAGCGCGCAGACGGGGCTTGATGTCCAGGTTGTCAGCGCAGCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS GCA 72 bp | GCAGCAGCGCCCAGCGGGTGCGCACCCAGCCAGGGCTaGCCGCTACCTTCAGTAGCTCCTCCTTGGATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAPSGCAPSQG*PLPSVAPPWIS Trigger: GCTTATCCAAGGAGGAGCTACTGAAGGTAGCGGGCAGCCCTGGCTGGGTGCGCACCCGCTGGGCGCTGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS TCA 72 bp | TGTCCTGGCTCATGGTGCCTGAGTCGCCCGCTGCGCTaGCAACCTGGACATCAAGCCCCGTCTGCGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CPGSWCLSRPLR*QPGHQAPSARW Trigger: CCAGCGCGCAGACGGGGCTTGATGTCCAGGTTGTCAGCGCAGCGGGCGACTCAGGCACCATGAGCCAGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS GCA 72 bp | TCCCCGGCCGCCGCCCCGTCCGCTGCATTCATGGGCTaGTTCTCCGGTTCTAGCTCGTTCAGCTCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: SPAAAPSAAFMG*FSGSSSFSSTS Trigger: AGATGTGGAGCTGAACGAGCTAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACGGGGCGGCGGCCGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS GCA 72 bp | CCGCATCCCGGCCTACAAAGGCCTGAAGGTCGCCGATaGGGTAGAGGGCGCCCTTGTGCCACCACCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PHPGLQRPEGRR*GRGRPCATTSV Trigger: TACAGAGGTGGTGGCACAAGGGCGCCCTCTACCGCATCGGCGACCTTCAGGCCTTTGTAGGCCGGGATGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS CCA 72 bp | TCTTCTCCCCGGCCGCCGCCCCGTCCGCTGCATTCATaGGCTGCTTCTCCGGTTCTAGCTCGTTCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPRPPPRPLHS*AASPVLARSAP Trigger: TGGAGCTGAACGAGCTAGAACCGGAGAAGCAGCCCATGAATGCAGCGGACGGGGCGGCGGCCGGGGAGAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS CAA 72 bp | AACTTGACCCCGGCCTCCGTCTCGTCCTCCGCCACCTaGATCTTCACCAGACCGTTCTTCTCCCCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLTPASVSSSAT*IFTRPFFSPAA Trigger: GGCGGCCGGGGAGAAGAACGGTCTGGTGAAGATCAAGGTGGCGGAGGACGAGACGGAGGCCGGGGTCAAGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS CCA 72 bp | CGCTCCTTACCCCGAAGGTCACTCAGCCGCCGGAACTaGGTAAGGAGGGAGCCAGGGTCTTCATTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLPRRSLSRRN*VRREPGSSFWP Trigger: GGGCCAGAATGAAGACCCTGGCTCCCTCCTTACCCAGTTCCGGCGGCTGAGTGACCTTCGGGGTAAGGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CAA 72 bp | CAGCCAGGGCTGCCCGCTACCTTCAGTAGCTCCTCCTaGGATAAGCCGGTGAACTTGACCCCGGCCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPGLPATFSSSS*DKPVNLTPASV Trigger: GACGGAGGCCGGGGTCAAGTTCACCGGCTTATCCAAGGAGGAGCTACTGAAGGTAGCGGGCAGCCCTGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS CAA 90 bp | CTGCCCGCTACCTTCAGTAGCTCCTCCTTGGATAAGCCGGTGAACTaGACCCCGGCCTCCGTCTCGTCCTCCGCCACCTTGATCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LPATFSSSSLDKPVN*TPASVSSSATLIFT Trigger: GGTGAAGATCAAGGTGGCGGAGGACGAGACGGAGGCCGGGGTCAAGTTCACCGGCTTATCCAAGGAGGAGCTACTGAAGGTAGCGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS TCA 72 bp | CCCCTAGCCTGGCTGACCGGCCCGAATCTCGGAAGTTaGGCACCACCAGGTAACGCTCATTCTGGTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLAWLTGPNLGS*APPGNAHSGPS Trigger: ACTGGGACCAGAATGAGCGTTACCTGGTGGTGCTCAACTTCCGAGATTCGGGCCGGTCAGCCAGGCTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CAA 72 bp | ACCTTCAGTAGCTCCTCCTTGGATAAGCCGGTGAACTaGACCCCGGCCTCCGTCTCGTCCTCCGCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TFSSSSLDKPVN*TPASVSSSATL Trigger: CAAGGTGGCGGAGGACGAGACGGAGGCCGGGGTCAAGTTCACCGGCTTATCCAAGGAGGAGCTACTGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205538.2 ENSMUST00000206560.2 ENSMUST00000206797.2 |
||
| CDS CCA 72 bp | AGGCCCTTCACCTTCAGGGTGCTCAAGTACTCCAGATaGCTCTTCAGACCAGCTATGCCTCCCGCATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RPFTFRVLKYSR*LFRPAMPPASR Trigger: CCGGGATGCGGGAGGCATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAGCACCCTGAAGGTGAAGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS CCA 72 bp | GGCACTGTCGGTACTAAGCAAAAGTTTAGCGCTGGCTaGCAGGCTTATGCCAGCAGGGAGGTTGGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GTVGTKQKFSAG*QAYASREVGGP Trigger: GGGGCCTCCAACCTCCCTGCTGGCATAAGCCTGCCAGCCAGCGCTAAACTTTTGCTTAGTACCGACAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 72 bp | TTCAGCTCCACATCTTTCATGTCCACTTCGGTGTCCTaGCTCATGGTGCCTGAGTCGCCCGCTGCGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FSSTSFMSTSVS*LMVPESPAALT Trigger: TGTCAGCGCAGCGGGCGACTCAGGCACCATGAGCCAGGACACCGAAGTGGACATGAAAGATGTGGAGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170157.8 |
||
| CDS GCA 72 bp | TGCTCAAGTACTCCAGATGGCTCTTCAGACCAGCTATaGCTCCCGCATCCCGGCCTACAAAGGCCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CSSTPDGSSDQL*LPHPGLQRPEG Trigger: ACCTTCAGGCCTTTGTAGGCCGGGATGCGGGAGGCATAGCTGGTCTGAAGAGCCATCTGGAGTACTTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206797.2 |
||
| CDS GCA 72 bp | AGGTCAGGTGAGGAAGACAGTGCATGGAAGTCACCGTaGAACAGAGAGCGCTCCTTACCCCGAAGGTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: RSGEEDSAWKSP*NRERSLPRRSL Trigger: GAGTGACCTTCGGGGTAAGGAGCGCTCTCTGTTGCACGGTGACTTCCATGCACTGTCTTCCTCACCTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CAA 90 bp | GAGTCGGAGAAGATGGTCCGGTATAAAGTCTGCGAGGAGTCCTGCTaGCGACACACTCCAGCTGCACCATTGGCTGCCAGTGGCATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ESEKMVRYKVCEESC*RHTPAAPLAASGIQ Trigger: TTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTTTATACCGGACCATCTTCTCCGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 72 bp | CTGGTAGAGTCGGAGAAGATGGTCCGGTATAAAGTCTaGGAGGAGTCCTGCTTGCGACACACTCCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVESEKMVRYKV*EESCLRHTPAA Trigger: TGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTTTATACCGGACCATCTTCTCCGACTCTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CAA 72 bp | AAGATGGTCCGGTATAAAGTCTGCGAGGAGTCCTGCTaGCGACACACTCCAGCTGCACCATTGGCTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KMVRYKVCEESC*RHTPAAPLAAS Trigger: ACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCTCGCAGACTTTATACCGGACCATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 72 bp | AGGAGTCCTGCTTGCGACACACTCCAGCTGCACCATTaGCTGCCAGTGGCATTCAAAAACCTAGTGACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPACDTLQLHH*LPVAFKNLVTR Trigger: CCTAGTCACTAGGTTTTTGAATGCCACTGGCAGCCAATGGTGCAGCTGGAGTGTGTCGCAAGCAGGACTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 72 bp | CGGAACTGGGTAAGGAGGGAGCCAGGGTCTTCATTCTaGCCCTTCACTGTCATGTTGAGGCTTACAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RNWVRREPGSSF*PFTVMLRLTGL Trigger: AAGACCTGTAAGCCTCAACATGACAGTGAAGGGCCAGAATGAAGACCCTGGCTCCCTCCTTACCCAGTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CCA 72 bp | CCTGCAACCAAGAACTCAGAGCTTCCTTCATTTTGGTaGCTACAATGTCAGCCTGAGCAGGGAGGAACCACG | + |
|
Preference number: 6 (lower is better) Translates to: PATKNSELPSFW*LQCQPEQGGTT Trigger: CGTGGTTCCTCCCTGCTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTCTGAGTTCTTGGTTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 |
||
| CDS CCA 72 bp | CGTCCTGCAACCAAGAACTCAGAGCTTCCTTCATTTTaGTGGCTACAATGTCAGCCTGAGCAGGGAGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RPATKNSELPSF*WLQCQPEQGGT Trigger: GGTTCCTCCCTGCTCAGGCTGACATTGTAGCCACCAAAATGAAGGAAGCTCTGAGTTCTTGGTTGCAGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 |
||
| CDS TCA 72 bp | AGCCAGGGTCTTCATTCTGGCCCTTCACTGTCATGTTaGGGCTTACAGGTCTTGGGATGTGAAAGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQGLHSGPSLSC*GLQVLGCERCW Trigger: CCAGCATCTTTCACATCCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGGCCAGAATGAAGACCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS GCA 72 bp | CCCACATCCCGGAATTGGAAACCATCCACACCGTCCTaGAACCAAGAACTCAGAGCTTCCTTCATTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTSRNWKPSTPS*NQELRASFILV Trigger: CACCAAAATGAAGGAAGCTCTGAGTTCTTGGTTGCAGGACGGTGTGGATGGTTTCCAATTCCGGGATGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 |
||
| CDS CCA 72 bp | AAGGGTGCATTCATCAGCTTTCCCACATCCCGGAATTaGAAACCATCCACACCGTCCTGCAACCAAGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: KGAFISFPTSRN*KPSTPSCNQEL Trigger: GAGTTCTTGGTTGCAGGACGGTGTGGATGGTTTCCAATTCCGGGATGTGGGAAAGCTGATGAATGCACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS CCA 72 bp | CTGGCCCTTCACTGTCATGTTGAGGCTTACAGGTCTTaGGATGTGAAAGATGCTGGACTCATTCCACGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LALHCHVEAYRS*DVKDAGLIPRH Trigger: ATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCTGTAAGCCTCAACATGACAGTGAAGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS TCA 72 bp | TTCACTGTCATGTTGAGGCTTACAGGTCTTGGGATGTaGAAGATGCTGGACTCATTCCACGGCATGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FTVMLRLTGLGM*KMLDSFHGMSG Trigger: CCCACTCATGCCGTGGAATGAGTCCAGCATCTTTCACATCCCAAGACCTGTAAGCCTCAACATGACAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000206598.2 |
||
| CDS CAA 72 bp | CAGCAGGTCGCTGGTGGATTCAAGTATGTTGACAATTaGCTGCAGGTCAGAGGACTCAGTCCCTGCAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQVAGGFKYVDN*LQVRGLSPCNQ Trigger: TTGATTGCAGGGACTGAGTCCTCTGACCTGCAGCAAATTGTCAACATACTTGAATCCACCAGCGACCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS TCA 72 bp | AGGTCGGTTTCATTGATTTCATCCTTCTGGTTCTTGTaGATTGGGCCTAACACCAGGCCCTTCACCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSVSLISSFWFL*IGPNTRPFTFR Trigger: CCTGAAGGTGAAGGGCCTGGTGTTAGGCCCAATTCACAAGAACCAGAAGGATGAAATCAATGAAACCGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205463.2 ENSMUST00000206797.2 |
||
| CDS GCA 72 bp | CTTGGTGATATTCTGCCACTCAGCCAAGTACAAGGGTaGATTCATCAGCTTTCCCACATCCCGGAATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGDILPLSQVQG*IHQLSHIPELE Trigger: TTCCAATTCCGGGATGTGGGAAAGCTGATGAATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS GCA 72 bp | AGGTCGCTGGTGGATTCAAGTATGTTGACAATTTGCTaGAGGTCAGAGGACTCAGTCCCTGCAATCAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLVDSSMLTIC*RSEDSVPAIKS Trigger: GCTTTTGATTGCAGGGACTGAGTCCTCTGACCTGCAGCAAATTGTCAACATACTTGAATCCACCAGCGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS GCA 72 bp | AGCAGGTCGCTGGTGGATTCAAGTATGTTGACAATTTaGTGCAGGTCAGAGGACTCAGTCCCTGCAATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLVDSSMLTI*CRSEDSVPAIK Trigger: TTTGATTGCAGGGACTGAGTCCTCTGACCTGCAGCAAATTGTCAACATACTTGAATCCACCAGCGACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS CAA 90 bp | GAGGACTCAGTCCCTGCAATCAAAAGCCTGTCCTCACTTAAGTTCTaGGTGATATTCTGCCACTCAGCCAAGTACAAGGGTGCATTCATC | + |
|
Preference number: 6 (lower is better) Translates to: EDSVPAIKSLSSLKF*VIFCHSAKYKGAFI Trigger: GATGAATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTTGATTGCAGGGACTGAGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS CAA 72 bp | GTCCCTGCAATCAAAAGCCTGTCCTCACTTAAGTTCTaGGTGATATTCTGCCACTCAGCCAAGTACAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VPAIKSLSSLKF*VIFCHSAKYKG Trigger: ACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTTGATTGCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS CAA 90 bp | CATCCACACCGTCCTGCAACCAAGAACTCAGAGCTTCTCTTTTTCTaGGCACTTTGTAGAAGGTCTTTAAAATCTTCCTGGGAGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HPHRPATKNSELLFF*ALCRRSLKSSWEPK Trigger: TTTGGGCTCCCAGGAAGATTTTAAAGACCTTCTACAAAGTGCCAAGAAAAAGAGAAGCTCTGAGTTCTTGGTTGCAGGACGGTGTGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205463.2 |
||
| CDS TCA 72 bp | CTGCAATCAAAAGCCTGTCCTCACTTAAGTTCTTGGTaGTATTCTGCCACTCAGCCAAGTACAAGGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQSKACPHLSSW*YSATQPSTRVH Trigger: ATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTTGATTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||
| CDS GCA 72 bp | AAAAGCCTGTCCTCACTTAAGTTCTTGGTGATATTCTaGCACTCAGCCAAGTACAAGGGTGCATTCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSLSSLKFLVIF*HSAKYKGAFIS Trigger: GCTGATGAATGCACCCTTGTACTTGGCTGAGTGGCAGAATATCACCAAGAACTTAAGTGAGGACAGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000010239.6 ENSMUST00000170157.8 ENSMUST00000205377.2 ENSMUST00000206598.2 |
||