Pregenerated sensors for SLC3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024131Ensembl transcript IDs: ENSMUST00000024944.9
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGGTGTCCCTGGAGCCTaGGTCTGGGTCCTGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYGVPGA*VWVLLR Trigger: CCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCCTGGAGCCTGGGTCTaGGTCCTGCTCCGGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYPGAWV*VLLRNV Trigger: GACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGCTGTGGGGTGTCCCTaGAGCCTGGGTCTGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPAVGCP*SLGLGP Trigger: AGGACCCAGACCCAGGCTCCAGGGACACCCCACAGC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGCGTTCCCGGGAGTGTaGACAGGAGCATGTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPAFPGV*TGACAW Trigger: CCATGCACATGCTCCTGTTCACACTCCCGGGAACGC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGGCTCCCTGCTGTACTaGTTCATGGTCTGCCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYGSLLY*FMVCRK Trigger: CTTCCGGCAGACCATGAACCAGTACAGCAGGGAGCC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCTCTCCATAGTAAGTaGTGGGCGTTCCCGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPLHSK*WAFPGV Trigger: CACTCCCGGGAACGCCCATCACTTACTATGGAGAGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACATACAGCCTCAGTGCTaGGCTCGGCTGGGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYIQPQC*ARLGLL Trigger: CAAAAGACCCAGCCGAGCTCAGCACTGAGGCTGTAT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGGGTGTCAACAGCACTaGCTTTGGAGGCTGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYGCQQH*LWRLSW Trigger: CCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGGAAGAGTACTTCCTTaGGCATCCCTGCATAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYGRVLP*ASLHRA Trigger: GGCCCTATGCAGGGATGCCCAAGGAAGTACTCTTCC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCACACGGAAACCACGGTaGGCCAGAAGAGGATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPTRKPR*ARRGSL Trigger: GAGAGATCCTCTTCTGGCTCACCGTGGTTTCCGTGT...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGTCATGGTACAGCTCTaGGTAGTGGGTGACCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPVMVQL*VVGDRV Trigger: GACACGGTCACCCACTACTCAGAGCTGTACCATGAC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGTCCCACTGCATCGGTaGCTTGGAGACAAGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPVPLHR*LGDKGS Trigger: ACTACCCTTGTCTCCAAGTCACCGATGCAGTGGGAC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCAAAGCATCTGTCTCTaGAAGCGGCCTGCTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYQSICL*KRPADG Trigger: TCCATCAGCAGGCCGCTTTCAGAGACAGATGCTTTG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTGCTGTACTGGTTCATaGTCTGCCGGAAGTCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYCCTGS*SAGSLG Trigger: TCCGAGACTTCCGGCAGACCATGAACCAGTACAGCA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGTGGGTAGCCAGGTGTaGTTGGCCTCAGTAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPVGSQV*LASVNP Trigger: TGGGTTTACTGAGGCCAACCACACCTGGCTACCCAC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCACCTGAGTTGTGGTaGAGTCATGGTACAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPPELW*SHGTAL Trigger: CAGAGCTGTACCATGACTTCACCACAACTCAGGTGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTCATGCATTCCCACCTaGGTTGTGGTGAAGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSCIPT*VVVKSW Trigger: CCATGACTTCACCACAACTCAGGTGGGAATGCATGA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGCATGTGCATGGCGTTaGCATACTCACTCCCTACTC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPACAWR*HTHSLL Trigger: GAGTAGGGAGTGAGTATGTCAACGCCATGCACATGC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCTGGGTCTGGGTCCTaGTCCGGAATGTCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPGSGS*SGMSSF Trigger: AAATGAAGACATTCCGGAGCAGGACCCAGACCCAGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCTGGTATATGGGACCTaGTTGCCACCAGTCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPLVYGT*LPPVKA Trigger: TGCCTTGACTGGTGGCAAGCAGGTCCCATATACCAG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGGTAGATCTGGTATATaGGACCTGCTTGCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYGRSGI*DLLATS Trigger: ACTGGTGGCAAGCAGGTCCCATATACCAGATCTACC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCTTCTCCAGAGAAATaGCACGGGTGTCAACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPSPEK*HGCQQH Trigger: GTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACAGTAGCACGCCCGACTaGAAACAAAGCATCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSSTPD*KQSICL Trigger: GAGACAGATGCTTTGTTTCCAGTCGGGCGTGCTACT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCCAGTCAAGGCATTTTaGAGAGATGACGATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYPVKAF*RDDDDG Trigger: GCCATCATCGTCATCTCTCCAAAATGCCTTGACTGG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACAGCCATAGTACATCATaGTCCTCTCGATGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSHSTS*SSRCSQ Trigger: CTGAGAGCATCGAGAGGACCATGATGTACTATGGCT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCGCCAGTCATCCAATTaGGCCATTTTCCTTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPRQSSN*AIFLQA Trigger: TGCCTGAAGGAAAATGGCCCAATTGGATGACTGGCG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCAACAGCACTGCCTTTaGAGGCTGAGTTGGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYQQHCL*RLSWYL Trigger: TAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCGTACTTCATCAAAGTaGCAGCTGGAGTTTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYRTSSK*QLEFPY Trigger: GTATGGAAACTCCAGCTGGCACTTTGATGAAGTACG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGTGAACAGGAGCATGTaGATGGCGTTGACATACTCA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPVNRSM*MALTYS Trigger: TGAGTATGTCAACGCCATGCACATGCTCCTGTTCAC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR GCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGAACTATTGTCCCACTaGATCGGTGACTTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPELLSH*IGDLET Trigger: TGTCTCCAAGTCACCGATGCAGTGGGACAATAGTTC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCCTTCAAACTCATTTaGATGGGGTCTCTCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPFKLI*MGSLLP Trigger: AGGCAAGAGAGACCCCATCCAAATGAGTTTGAAGGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGGACAAACCCGTTATTaGTTCGGCATCCCTTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPGQTRY*FGIPSN Trigger: GTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACCATCAAAGTGCCAGCTaGAGTTTCCATACACACTCA | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYHQSAS*SFHTHS Trigger: TGAGTGTGTATGGAAACTCCAGCTGGCACTTTGATG...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTCAAACTCATTTGGATaGGGTCTCTCTTGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSNSFG*GLSCLC Trigger: ACAAAGGCAAGAGAGACCCCATCCAAATGAGTTTGA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACAACCTTTGTCATGGATaGCAGCAACCAAATTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYNLCHG*QQPNSQ Trigger: TTGAGAATTTGGTTGCTGCCATCCATGACAAAGGTT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCACCGTGTCCGGAATTTaGGATGTATTCACTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPTVSGI*DVFTWI Trigger: AATCCAAGTGAATACATCCCAAATTCCGGACACGGT...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR TCA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTTATGTTTAAAGCAGTaGTATAGTCCAGCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QKYLRIDAIHESAQPCAYLCLKQ*YSPASP Trigger: AGGAGAAGCTGGACTATATCACTGCTTTAAACATAA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCTTTGGAGGCTGAGTTaGTACTTAACCTTATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPLWRLS*YLTLFS Trigger: TGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCGGAATGTCTTCATTTTaGACAAACCCGTTATTGGTT | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPGMSSF*TNPLLV Trigger: AACCAATAACGGGTTTGTCCAAAATGAAGACATTCC...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CCA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGGGATGTATTCACTTaGATTTCATTTCTCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: FVLQKYLRIDAIHESAQPWDVFT*ISFLRS Trigger: GGATCTGAGAAATGAAATCCAAGTGAATACATCCCA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 90 bp | GCACCCGGTAGCGAGCCTGGCCGGAGAACTGGAAGAGTACTTCCTTaGGCATCCCTGCATAGGGCCGCACCGCCTTTAGGTGAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: APGSEPGRRTGRVLP*ASLHRAAPPLGEAP Trigger: AGGAGCCTCACCTAAAGGCGGTGCGGCCCTATGCAGGGATGCCCAAGGAAGTACTCTTCCAGTTCTCCGGCCAGGCTCGCTACCGGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 90 bp | CCTCTGGAGCAGGGATACTCACGGCGTTGGGCTGTGGGGTGTCCCTaGAGCCTGGGTCTGGGTCCTGCTCCGGAATGTCTTCATTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PLEQGYSRRWAVGCP*SLGLGPAPECLHFG Trigger: TCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACCCCACAGCCCAACGCCGTGAGTATCCCTGCTCCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 90 bp | CACGCCCGACTGGAAACAAAGCATCTGTCTCTGAAAGCGGCCTGCTaGTGGAGGGGAGCCTTCGTGCTGTGCTCCAAGACCAGGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HARLETKHLSLKAAC*WRGAFVLCSKTRPS Trigger: AGAGGGCCTGGTCTTGGAGCACAGCACGAAGGCTCCCCTCCATCAGCAGGCCGCTTTCAGAGACAGATGCTTTGTTTCCAGTCGGGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 90 bp | AGCAGGGATACTCACGGCGTTGGGCTGTGGGGTGTCCCTGGAGCCTaGGTCTGGGTCCTGCTCCGGAATGTCTTCATTTTGGACAAACCC | + |
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Preference number: 5 (lower is better) Translates to: SRDTHGVGLWGVPGA*VWVLLRNVFILDKP Trigger: GGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACCCCACAGCCCAACGCCGTGAGTATCCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 90 bp | GCTTCGGCCCCCATGAACCGGTATCTGCCAGGCTCCCTGCTGTACTaGTTCATGGTCTGCCGGAAGTCTCGGACGATGTCATGCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: ASAPMNRYLPGSLLY*FMVCRKSRTMSCIP Trigger: GGGAATGCATGACATCGTCCGAGACTTCCGGCAGACCATGAACCAGTACAGCAGGGAGCCTGGCAGATACCGGTTCATGGGGGCCGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 90 bp | GTGCACTGGAGTAGCACGCCCGACTGGAAACAAAGCATCTGTCTCTaGAAGCGGCCTGCTGATGGAGGGGAGCCTTCGTGCTGTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VHWSSTPDWKQSICL*KRPADGGEPSCCAP Trigger: TGGAGCACAGCACGAAGGCTCCCCTCCATCAGCAGGCCGCTTTCAGAGACAGATGCTTTGTTTCCAGTCGGGCGTGCTACTCCAGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 90 bp | ACGGCGTTGGGCTGTGGGGTGTCCCTGGAGCCTGGGTCTGGGTCCTaGTCCGGAATGTCTTCATTTTGGACAAACCCGTTATTGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TALGCGVSLEPGSGS*SGMSSFWTNPLLVR Trigger: CCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACCCCACAGCCCAACGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | AAATGGCAAGCCATAGTACATCATGGTCCTCTCGATGCTCTCAGCTaGGGCTTCGGCCCCCATGAACCGGTATCTGCCAGGCTCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KWQAIVHHGPLDALS*GFGPHEPVSARLPA Trigger: AGCAGGGAGCCTGGCAGATACCGGTTCATGGGGGCCGAAGCCTCAGCTGAGAGCATCGAGAGGACCATGATGTACTATGGCTTGCCATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | GATACTCACGGCGTTGGGCTGTGGGGTGTCCCTGGAGCCTGGGTCTaGGTCCTGCTCCGGAATGTCTTCATTTTGGACAAACCCGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: DTHGVGLWGVPGAWV*VLLRNVFILDKPVI Trigger: AATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACCCCACAGCCCAACGCCGTGAGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | ACAGCCTCAGTGCTGAGCTCGGCTGGGTCTTTTGGACATCCACATTaGCGGTGTGGTAGTCAGAGTTTGTGGGTAGCCAGGTGTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TASVLSSAGSFGHPH*RCGSQSLWVARCGW Trigger: CCAACCACACCTGGCTACCCACAAACTCTGACTACCACACCGTCAATGTGGATGTCCAAAAGACCCAGCCGAGCTCAGCACTGAGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | CCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTaGGGACCAGCTCTGTGGCATGGAGTAGACTCAGATCCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: PQSDCRLSRGKTSPG*GPALWHGVDSDPDT Trigger: TGTATCAGGATCTGAGTCTACTCCATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTTGCCTCTTGAGAGACGACAGTCACTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | AAGACGTTATCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTaGCTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KTLSMPSSSLVYTTE*LSSLKRQNQPRLRT Trigger: GGTCCTCAGCCGGGGCTGGTTTTGCCTCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS GCA 90 bp | GGCCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTaGCTTTGGAGGCTGAGTTGGTACTTAACCTTATTCTCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPSPEKWHGCQQH*LWRLSWYLTLFSAL Trigger: CAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | TCCCTGGAGCCTGGGTCTGGGTCCTGCTCCGGAATGTCTTCATTTTaGACAAACCCGTTATTGGTTCGGCATCCCTTCAAACTCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLEPGSGSCSGMSSF*TNPLLVRHPFKLIW Trigger: CCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | CTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTaGAGGCTGAGTTGGTACTTAACCTTATTCTCAGCTCTGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSPEKWHGCQQHCL*RLSWYLTLFSALEE Trigger: TTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | GTCATGCATTCCCACCTGAGTTGTGGTGAAGTCATGGTACAGCTCTaGGTAGTGGGTGACCGTGTCCGGAATTTGGGATGTATTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMHSHLSCGEVMVQL*VVGDRVRNLGCIHL Trigger: CAAGTGAATACATCCCAAATTCCGGACACGGTCACCCACTACTCAGAGCTGTACCATGACTTCACCACAACTCAGGTGGGAATGCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | CTGGGTCCTGCTCCGGAATGTCTTCATTTTGGACAAACCCGTTATTaGTTCGGCATCCCTTCAAACTCATTTGGATGGGGTCTCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPAPECLHFGQTRY*FGIPSNSFGWGLSC Trigger: GCAAGAGAGACCCCATCCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | GTAGATCTGGTATATGGGACCTGCTTGCCACCAGTCAAGGCATTTTaGAGAGATGACGATGATGGCTATGGTGGCTCCAATGAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VDLVYGTCLPPVKAF*RDDDDGYGGSNEQE Trigger: TTCCTGCTCATTGGAGCCACCATAGCCATCATCGTCATCTCTCCAAAATGCCTTGACTGGTGGCAAGCAGGTCCCATATACCAGATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACACACTCAGCCAGTTGTaGGGAGGGGTGGTTACACCG | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYTLSQL*GGVVTP Trigger: CGGTGTAACCACCCCTCCCAACAACTGGCTGAGTGT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | TTCCATACACACTCAGCCAGTTGTTGGGAGGGGTGGTTACACCGTTaGCATGGGTACAGTTGTGCCAGATGTAGTAATCGGTGTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHTHSASCWEGWLHR*HGYSCARCSNRCIF Trigger: GAAAATACACCGATTACTACATCTGGCACAACTGTACCCATGTCAACGGTGTAACCACCCCTCCCAACAACTGGCTGAGTGTGTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCGCCAGTCATCCAATaGGGCCATTTTCCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPPVIQ*GHFPSG Trigger: GCCTGAAGGAAAATGGCCCAATTGGATGACTGGCGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGCCGTCCAGCTCTCTaGTGTACACCACAGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPCRPAL*CTPQSD Trigger: GTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | GGCCTCAGTAAACCCAGCATTGGAACTATTGTCCCACTGCATCGGTaGCTTGGAGACAAGGGTAGTACTATCATAGCTCTCGTTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GLSKPSIGTIVPLHR*LGDKGSTIIALVEI Trigger: AATTTCAACGAGAGCTATGATAGTACTACCCTTGTCTCCAAGTCACCGATGCAGTGGGACAATAGTTCCAATGCTGGGTTTACTGAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS GCA 90 bp | TTGATGATTCTCCAAAATTCAGAACCACGAGGAAGACGTTATCTATaGCGTCCAGCTCTCTTGTGTACACCACAGAGTGACTGTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LMILQNSEPRGRRYL*RPALLCTPQSDCRL Trigger: GAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGGTTCTGAATTTTGGAGAATCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTACACACTCAGCCAGTaGTTGGGAGGGGTGGTTACA | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPYTLSQ*LGGVVT Trigger: TGTAACCACCCCTCCCAACAACTGGCTGAGTGTGTA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACAGCATGTGCATGGCGTaGACATACTCACTCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSMCMA*TYSLPT Trigger: AGTAGGGAGTGAGTATGTCAACGCCATGCACATGCT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCAGCATTGGAACTATaGTCCCACTGCATCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPALEL*SHCIGD Trigger: GTCACCGATGCAGTGGGACAATAGTTCCAATGCTGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 90 bp | ACTGGTGAAAATAACATTGCTTTCGTACTTCATCAAAGTGCCAGCTaGAGTTTCCATACACACTCAGCCAGTTGTTGGGAGGGGTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGENNIAFVLHQSAS*SFHTHSASCWEGWL Trigger: TAACCACCCCTCCCAACAACTGGCTGAGTGTGTATGGAAACTCCAGCTGGCACTTTGATGAAGTACGAAAGCAATGTTATTTTCACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTCCCTTCAAACTCATTaGGATGGGGTCTCTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPSLQTH*DGVSLA Trigger: GGCAAGAGAGACCCCATCCAAATGAGTTTGAAGGGA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTGGACAAACCCGTTATaGGTTCGGCATCCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYWTNPL*VRHPFK Trigger: TTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGACCGTGTCCGGAATTaGGGATGTATTCACTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYDRVRN*GCIHLD Trigger: ATCCAAGTGAATACATCCCAAATTCCGGACACGGTC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGTGGTGAAGTACTTGTaGAAAGGAAAGTCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYVVKYL*KGKSAS Trigger: GGAAGCCGACTTTCCTTTCAACAAGTACTTCACCAC...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTCAGTAAACCCAGCATaGGAACTATTGTCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYSVNPA*ELLSHC Trigger: GCAGTGGGACAATAGTTCCAATGCTGGGTTTACTGA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTCAACAGCACTGCCTTaGGAGGCTGAGTTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPSTALP*EAELVL Trigger: AAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTGGAACCAAGGATGTTaGTCACTAGTGTGGTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYWNQGC*SLVWFG Trigger: ACCAAACCACACTAGTGACAAACATCCTTGGTTCCA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTCTCCATTCCCATCCTaGTCACTGTCCTTAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPSPFPS*SLSLKD Trigger: GTCTTTTAAGGACAGTGACAAGGATGGGAATGGAGA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCCCTTTGGAGGCTGAGTaGGTACTTAACCTTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPPLEAE*VLNLIL Trigger: GAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGG...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACTTCCTTTATTTCCTCTaGAACAGCAGGATTTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYFLYFL*NSRISE Trigger: TTCCGAAATCCTGCTGTTCAAGAGGAAATAAAGGAA...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCATTGTGGTGAAGTACTaGTTGAAAGGAAAGTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPIVVKY*LKGKSA Trigger: AGCCGACTTTCCTTTCAACAAGTACTTCACCACAAT...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS GCA 90 bp | TTGGATTTCATTTCTCAGATCCTTCGCTTCCAGAAGAAATTTAACTaGATCAAAACTAAACCCATCAACACCCTTCGAGAGCCAGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: LDFISQILRFQKKFN*IKTKPINTLREPER Trigger: ACGTTCTGGCTCTCGAAGGGTGTTGATGGGTTTAGTTTTGATGCAGTTAAATTTCTTCTGGAAGCGAAGGATCTGAGAAATGAAATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACATAGGGTCAATTTCTTaGAAATCCTCAACAGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QKYLRIDAIHESAQPCAYIGSIS*KSSTAY Trigger: ATACGCTGTTGAGGATTTCAAAGAAATTGACCCTAT...GTACGCACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTTGGGATGTATTCACTaGGATTTCATTTCTCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FVLQKYLRIDAIHESAQPLGCIH*DFISQI Trigger: GATCTGAGAAATGAAATCCAAGTGAATACATCCCAA...GGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | AGTTGGTACTTAACCTTATTCTCAGCTCTGGAGGAAGATCTGAAATaGTCCCCTGTAGATTTAGCACAGTTGATGATTCTCCAAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWYLTLFSALEEDLK*SPVDLAQLMILQNS Trigger: TGAATTTTGGAGAATCATCAACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 90 bp | ACACCCTTCGAGAGCCAGAACGTTATTATTTCCTTTATTTCCTCTTaGACAGCAGGATTTCGGAAATTTAAATCTGGTTGCTCTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPFESQNVIISFISS*TAGFRKFKSGCSFK Trigger: TTTGAAAGAGCAACCAGATTTAAATTTCCGAAATCCTGCTGTTCAAGAGGAAATAAAGGAAATAATAACGTTCTGGCTCTCGAAGGGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 72 bp | CAGGGATACTCACGGCGTTGGGCTGTGGGGTGTCCCTaGAGCCTGGGTCTGGGTCCTGCTCCGGAATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGYSRRWAVGCP*SLGLGPAPECL Trigger: AAGACATTCCGGAGCAGGACCCAGACCCAGGCTCCAGGGACACCCCACAGCCCAACGCCGTGAGTATCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 72 bp | AGCGAGCCTGGCCGGAGAACTGGAAGAGTACTTCCTTaGGCATCCCTGCATAGGGCCGCACCGCCTTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SEPGRRTGRVLP*ASLHRAAPPLG Trigger: ACCTAAAGGCGGTGCGGCCCTATGCAGGGATGCCCAAGGAAGTACTCTTCCAGTTCTCCGGCCAGGCTCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 72 bp | GCCATAGTACATCATGGTCCTCTCGATGCTCTCAGCTaGGGCTTCGGCCCCCATGAACCGGTATCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AIVHHGPLDALS*GFGPHEPVSAR Trigger: CCTGGCAGATACCGGTTCATGGGGGCCGAAGCCTCAGCTGAGAGCATCGAGAGGACCATGATGTACTATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 72 bp | CCCATGAACCGGTATCTGCCAGGCTCCCTGCTGTACTaGTTCATGGTCTGCCGGAAGTCTCGGACGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PMNRYLPGSLLY*FMVCRKSRTMS Trigger: TGACATCGTCCGAGACTTCCGGCAGACCATGAACCAGTACAGCAGGGAGCCTGGCAGATACCGGTTCATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 72 bp | GACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTaGGGACCAGCTCTGTGGCATGGAGTAGACTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DCRLSRGKTSPG*GPALWHGVDSD Trigger: ATCTGAGTCTACTCCATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTTGCCTCTTGAGAGACGACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS GCA 72 bp | TATCTGCCAGGCTCCCTGCTGTACTGGTTCATGGTCTaGCGGAAGTCTCGGACGATGTCATGCATTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: YLPGSLLYWFMV*RKSRTMSCIPT Trigger: GGTGGGAATGCATGACATCGTCCGAGACTTCCGGCAGACCATGAACCAGTACAGCAGGGAGCCTGGCAGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS CCA 72 bp | ACCGGTATCTGCCAGGCTCCCTGCTGTACTGGTTCATaGTCTGCCGGAAGTCTCGGACGATGTCATGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: TGICQAPCCTGS*SAGSLGRCHAF Trigger: GAATGCATGACATCGTCCGAGACTTCCGGCAGACCATGAACCAGTACAGCAGGGAGCCTGGCAGATACCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 72 bp | GTGCTGAGCTCGGCTGGGTCTTTTGGACATCCACATTaGCGGTGTGGTAGTCAGAGTTTGTGGGTAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSSAGSFGHPH*RCGSQSLWVAR Trigger: CCTGGCTACCCACAAACTCTGACTACCACACCGTCAATGTGGATGTCCAAAAGACCCAGCCGAGCTCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
||
| CDS TCA 72 bp | TCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTaGCTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SMPSSSLVYTTE*LSSLKRQNQPR Trigger: CCGGGGCTGGTTTTGCCTCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | TCAGCCGAGGAGTCTCCGGTCCGCCAGTCATCCAATTaGGCCATTTTCCTTCAGGCATGTTTTCCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAEESPVRQSSN*AIFLQACFPSR Trigger: CCTGGATGGAAAACATGCCTGAAGGAAAATGGCCCAATTGGATGACTGGCGGACCGGAGACTCCTCGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | GTCAGCCGAGGAGTCTCCGGTCCGCCAGTCATCCAATaGGGCCATTTTCCTTCAGGCATGTTTTCCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: VSRGVSGPPVIQ*GHFPSGMFSIQ Trigger: CTGGATGGAAAACATGCCTGAAGGAAAATGGCCCAATTGGATGACTGGCGGACCGGAGACTCCTCGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 72 bp | CACTCAGCCAGTTGTTGGGAGGGGTGGTTACACCGTTaGCATGGGTACAGTTGTGCCAGATGTAGTAATCGG | + |
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Preference number: 6 (lower is better) Translates to: HSASCWEGWLHR*HGYSCARCSNR Trigger: CCGATTACTACATCTGGCACAACTGTACCCATGTCAACGGTGTAACCACCCCTCCCAACAACTGGCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 72 bp | TCCCACCTGAGTTGTGGTGAAGTCATGGTACAGCTCTaGGTAGTGGGTGACCGTGTCCGGAATTTGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SHLSCGEVMVQL*VVGDRVRNLGC Trigger: ACATCCCAAATTCCGGACACGGTCACCCACTACTCAGAGCTGTACCATGACTTCACCACAACTCAGGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | ACTTCATCAAAGTGCCAGCTGGAGTTTCCATACACACTCAGCCAGTaGTTGGGAGGGGTGGTTACACCGTTGACATGGGTACAGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TSSKCQLEFPYTLSQ*LGGVVTPLTWVQLC Trigger: GCACAACTGTACCCATGTCAACGGTGTAACCACCCCTCCCAACAACTGGCTGAGTGTGTATGGAAACTCCAGCTGGCACTTTGATGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | GGTAGCCAGGTGTGGTTGGCCTCAGTAAACCCAGCATTGGAACTATaGTCCCACTGCATCGGTGACTTGGAGACAAGGGTAGTACTATCA | + |
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Preference number: 6 (lower is better) Translates to: GSQVWLASVNPALEL*SHCIGDLETRVVLS Trigger: TGATAGTACTACCCTTGTCTCCAAGTCACCGATGCAGTGGGACAATAGTTCCAATGCTGGGTTTACTGAGGCCAACCACACCTGGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | TCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTaGGAGGCTGAGTTGGTACTTAACCTTATTCTCAGCTCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPFSREMARVSTALP*EAELVLNLILSSGG Trigger: TCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | CCTGGGTCTGGGTCCTGCTCCGGAATGTCTTCATTTTaGACAAACCCGTTATTGGTTCGGCATCCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PGSGSCSGMSSF*TNPLLVRHPFK Trigger: TTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | CCACGAGGAAGACGTTATCTATGCCGTCCAGCTCTCTaGTGTACACCACAGAGTGACTGTCGTCTCTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PRGRRYLCRPAL*CTPQSDCRLSR Trigger: TCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | GCACGGGTGTCAACAGCACTGCCTTTGGAGGCTGAGTaGGTACTTAACCTTATTCTCAGCTCTGGAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: ARVSTALPLEAE*VLNLILSSGGR Trigger: TCTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 72 bp | CCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTaGCTTTGGAGGCTGAGTTGGTACTTAACCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: PSPEKWHGCQQH*LWRLSWYLTLF Trigger: GAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | GTATATGGGACCTGCTTGCCACCAGTCAAGGCATTTTaGAGAGATGACGATGATGGCTATGGTGGCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: VYGTCLPPVKAF*RDDDDGYGGSN Trigger: ATTGGAGCCACCATAGCCATCATCGTCATCTCTCCAAAATGCCTTGACTGGTGGCAAGCAGGTCCCATATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | CACGGGTGTCAACAGCACTGCCTTTGGAGGCTGAGTTaGTACTTAACCTTATTCTCAGCTCTGGAGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HGCQQHCLWRLS*YLTLFSALEED Trigger: ATCTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | TCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTaGGAGGCTGAGTTGGTACTTAACCTTATTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SREMARVSTALP*EAELVLNLILS Trigger: GCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | TCTGGGTCCTGCTCCGGAATGTCTTCATTTTGGACAAACCCGTTATaGGTTCGGCATCCCTTCAAACTCATTTGGATGGGGTCTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSCSGMSSFWTNPL*VRHPFKLIWMGSLL Trigger: CAAGAGAGACCCCATCCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCAGGACCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | AATTCAGAACCACGAGGAAGACGTTATCTATGCCGTCCAGCTCTCTaGTGTACACCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: NSEPRGRRYLCRPAL*CTPQSDCRLSRGKT Trigger: GGTTTTGCCTCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGGTTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 72 bp | CTTAAAAGACCTCGGGTAGATCTGGTATATGGGACCTaGTTGCCACCAGTCAAGGCATTTTGGAGAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LKRPRVDLVYGT*LPPVKAFWRDD Trigger: GTCATCTCTCCAAAATGCCTTGACTGGTGGCAAGCAGGTCCCATATACCAGATCTACCCGAGGTCTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 72 bp | GCCTCAGTAAACCCAGCATTGGAACTATTGTCCCACTaGATCGGTGACTTGGAGACAAGGGTAGTACTATCA | + |
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Preference number: 6 (lower is better) Translates to: ASVNPALELLSH*IGDLETRVVLS Trigger: TGATAGTACTACCCTTGTCTCCAAGTCACCGATGCAGTGGGACAATAGTTCCAATGCTGGGTTTACTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 72 bp | CTCCAAAATTCAGAACCACGAGGAAGACGTTATCTATaGCGTCCAGCTCTCTTGTGTACACCACAGAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LQNSEPRGRRYL*RPALLCTPQSD Trigger: GTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGGTTCTGAATTTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | AGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGGAGGCTGAGTaGGTACTTAACCTTATTCTCAGCTCTGGAGGAAGATCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: REMARVSTALPLEAE*VLNLILSSGGRSEM Trigger: CATTTCAGATCTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 72 bp | AAACCCAGCATTGGAACTATTGTCCCACTGCATCGGTaGCTTGGAGACAAGGGTAGTACTATCATAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KPSIGTIVPLHR*LGDKGSTIIAL Trigger: GAGAGCTATGATAGTACTACCCTTGTCTCCAAGTCACCGATGCAGTGGGACAATAGTTCCAATGCTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | GCTCCGGAATGTCTTCATTTTGGACAAACCCGTTATTaGTTCGGCATCCCTTCAAACTCATTTGGATGGGGT | + |
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Preference number: 6 (lower is better) Translates to: APECLHFGQTRY*FGIPSNSFGWG Trigger: ACCCCATCCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | AAACCCGTTATTGGTTCGGCATCCCTTCAAACTCATTaGGATGGGGTCTCTCTTGCCTTTGTCCTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: KPVIGSASLQTH*DGVSLAFVLIH Trigger: ATGGATGAGGACAAAGGCAAGAGAGACCCCATCCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | TGCTCCGGAATGTCTTCATTTTGGACAAACCCGTTATaGGTTCGGCATCCCTTCAAACTCATTTGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSGMSSFWTNPL*VRHPFKLIWMG Trigger: CCCCATCCAAATGAGTTTGAAGGGATGCCGAACCAATAACGGGTTTGTCCAAAATGAAGACATTCCGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | GTAATCGGTGTATTTTCCGCTCCGTGTCCTACTCGATaGGAACCAAGGATGTTTGTCACTAGTGTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VIGVFSAPCPTR*EPRMFVTSVVW Trigger: CCAAACCACACTAGTGACAAACATCCTTGGTTCCAATCGAGTAGGACACGGAGCGGAAAATACACCGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | GTGGGTGACCGTGTCCGGAATTTGGGATGTATTCACTaGGATTTCATTTCTCAGATCCTTCGCTTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VGDRVRNLGCIH*DFISQILRFQK Trigger: CTTCTGGAAGCGAAGGATCTGAGAAATGAAATCCAAGTGAATACATCCCAAATTCCGGACACGGTCACCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | TGGGTGACCGTGTCCGGAATTTGGGATGTATTCACTTaGATTTCATTTCTCAGATCCTTCGCTTCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: WVTVSGIWDVFT*ISFLRSFASRR Trigger: TCTTCTGGAAGCGAAGGATCTGAGAAATGAAATCCAAGTGAATACATCCCAAATTCCGGACACGGTCACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 90 bp | CCAGATGTAGTAATCGGTGTATTTTCCGCTCCGTGTCCTACTCGATaGGAACCAAGGATGTTTGTCACTAGTGTGGTTTGGTATGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PDVVIGVFSAPCPTR*EPRMFVTSVVWYEI Trigger: GATTTCATACCAAACCACACTAGTGACAAACATCCTTGGTTCCAATCGAGTAGGACACGGAGCGGAAAATACACCGATTACTACATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CCA 72 bp | AATAACATTGCTTTCGTACTTCATCAAAGTGCCAGCTaGAGTTTCCATACACACTCAGCCAGTTGTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: NNIAFVLHQSAS*SFHTHSASCWE Trigger: CTCCCAACAACTGGCTGAGTGTGTATGGAAACTCCAGCTGGCACTTTGATGAAGTACGAAAGCAATGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | CCGCTCCGTGTCCTACTCGATTGGAACCAAGGATGTTaGTCACTAGTGTGGTTTGGTATGAAATCAATTATT | + |
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Preference number: 6 (lower is better) Translates to: PLRVLLDWNQGC*SLVWFGMKSII Trigger: AATAATTGATTTCATACCAAACCACACTAGTGACAAACATCCTTGGTTCCAATCGAGTAGGACACGGAGCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS GCA 72 bp | ATTTCTCAGATCCTTCGCTTCCAGAAGAAATTTAACTaGATCAAAACTAAACCCATCAACACCCTTCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ISQILRFQKKFN*IKTKPINTLRE Trigger: CTCTCGAAGGGTGTTGATGGGTTTAGTTTTGATGCAGTTAAATTTCTTCTGGAAGCGAAGGATCTGAGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS CAA 72 bp | ATCTGGTTGCTCTTTCAAAAACTGGTGAAAATAACATaGCTTTCGTACTTCATCAAAGTGCCAGCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: IWLLFQKLVKIT*LSYFIKVPAGV Trigger: AACTCCAGCTGGCACTTTGATGAAGTACGAAAGCAATGTTATTTTCACCAGTTTTTGAAAGAGCAACCAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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| CDS TCA 72 bp | GAGAGCCAGAACGTTATTATTTCCTTTATTTCCTCTTaGACAGCAGGATTTCGGAAATTTAAATCTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ESQNVIISFISS*TAGFRKFKSGC Trigger: GCAACCAGATTTAAATTTCCGAAATCCTGCTGTTCAAGAGGAAATAAAGGAAATAATAACGTTCTGGCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024944.9 |
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