Pregenerated sensors for SLC39A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053897Ensembl transcript IDs: ENSMUST00000029810.6, ENSMUST00000081978.10, ENSMUST00000167390.8, ENSMUST00000180196.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATaGCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: KEAVSADCQSPLMST*LLHHQSLTQPSPAV Trigger: CACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR CCA 90 bp | GGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATaGGAACAAAGCACACTGCACATAAAAGAAGCCGTCTCTGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GRKSMLRFSIQRYTI*EQSTLHIKEAVSAD Trigger: GTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR TCA 90 bp | ACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAGTATGCTaGGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: TLSELCVLRKVERVC*GFPSNGIPYGNKAH Trigger: GTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR TCA 90 bp | TGTTACTTTGTATTAGCTTTCAAAACAATCCTACAGGTCGCCAACTaGGACATAAAGCTGAACAAACGCTGTGCGCTATCTTTCTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: CYFVLAFKTILQVAN*DIKLNKRCALSFWG Trigger: ACCCCAGAAAGATAGCGCACAGCGTTTGTTCAGCTTTATGTCTCAGTTGGCGACCTGTAGGATTGTTTTGAAAGCTAATACAAAGTAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGTCAGGGACCAAGCCCTaGGCCCAAGCCTTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLSGTKP*AQALLG Trigger: GCCCAGCAAGGCTTGGGCTCAGGGCTTGGTCCCTGA...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGGAGCCCAAGCCTTGCTaGGCTAGCAAGCCTTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLEPKPC*ASKPFI Trigger: GATGAAAGGCTTGCTAGCCCAGCAAGGCTTGGGCTC...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AACCACAGCATAAATCATAGCAAAGCAATTCTGGTCTTCTGCAGGGTGTGTTCATCAGGGACCAAGCCCTaGGCCCAAGCCTTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NHSINHSKAILVFCRVCSSGTKP*AQALLG Trigger: GCCCAGCAAGGCTTGGGCTCAGGGCTTGGTCCCTGA...TGAACACACCCTGCAGAAGACCAGAATTGCTTTGCTATGATTTATGCTGTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR GCA 90 bp | AACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCATAAACCTGAGCCCAAGCCTTaGTGGGCTAGCAAGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: NQSRILLRHFCWLEPQHKPEPKP*WASKPF Trigger: GAAAGGCTTGCTAGCCCAGCAAGGCTTGGGCTCAGG...TTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR GCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCCCTGAGCCCAAGCCTTaGTGGGCTAGCAAGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HIKEAVSADCQSPLMSTCPEPKP*WASKPF Trigger: GAAAGGCTTGCTAGCCCAGCAAGGCTTGGGCTCAGG...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGCTGTATGTCTGCTTGTaGATGCACGTGTTTGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLLYVCL*MHVFAS Trigger: TGAAGCAAACACGTGCATTCACAAGCAGACATACAG...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTTGGAGCTGTCTGTCTTaGTTTTCTTCCTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCWSCLS*FSSSFD Trigger: ATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCA...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCAGAGCATGGCAAGACTaGGTTCTAACCAGTCTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: HIKEAVSADCQSPLMSTCRAWQD*VLTSLA Trigger: TGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCT...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGAGCCCAGCCCAGCTGTaGTTTTTGCATTTATTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLSPAQL*FLHLLK Trigger: TTTCAATAAATGCAAAAATCACAGCTGGGCTGGGCT...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTAACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCTGTATGTCTGCTTGTaGATGCACGTGTTTGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSNQSRILLRHFCWLEPQLYVCL*MHVFAS Trigger: TGAAGCAAACACGTGCATTCACAAGCAGACATACAG...CTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTTAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACCTGAGCCCAAGCCTTaGTGGGCTAGCAAGCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEPEPKP*WASKPF Trigger: GAAAGGCTTGCTAGCCCAGCAAGGCTTGGGCTCAGG...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCGGAAGAAAACCACTCTaGAAACGCTTGAGGTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HIKEAVSADCQSPLMSTCGRKPL*KRLRFL Trigger: CAAAAACCTCAAGCGTTTTCAGAGTGGTTTTCTTCC...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAAGAGCATGGCAAGACTaGGTTCTAACCAGTCTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: LQRAQTLSELCVLRKVERRAWQD*VLTSLA Trigger: TGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCT...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAACTGTATGTCTGCTTGTaGATGCACGTGTTTGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RLQRAQTLSELCVLRKVELYVCL*MHVFAS Trigger: TGAAGCAAACACGTGCATTCACAAGCAGACATACAG...TTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCTGGAGCTGTCTGTCTTaGTTTTCTTCCTCATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: HIKEAVSADCQSPLMSTCWSCLS*FSSSFD Trigger: ATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCA...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR CAA 90 bp | GGTCCTGCATGCACTGGAGCTGTCTGTCTTGATTTTCTTCCTCATTaGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GPACTGAVCLDFLPH*MHLPLKAVKHINWK Trigger: CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCAGTGCATGCAGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCATAAACCTATTCTACATATCTaGAACCAGTCATTAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: NQSRILLRHFCWLEPQHKPILHI*NQSLDS Trigger: GGAATCTAATGACTGGTTTCAGATATGTAGAATAGG...TTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCCCTATTCTACATATCTaGAACCAGTCATTAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: HIKEAVSADCQSPLMSTCPILHI*NQSLDS Trigger: GGAATCTAATGACTGGTTTCAGATATGTAGAATAGG...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGACCAGCCTTTGCAGTCTaGAACCGAAAACCTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LQRAQTLSELCVLRKVERPAFAV*NRKPFK Trigger: CTTAAAAGGTTTTCGGTTTCAGACTGCAAAGGCTGG...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGGATTGTGTTTTTCTCTaGATCTGTATGTCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: STLHIKEAVSADCQSPLMDCVFL*ICMSAC Trigger: ACAAGCAGACATACAGATCCAGAGAAAAACACAATC...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCGGAAGAAAACCACTCTaGAAACGCTTGAGGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RKSMLRFSIQRYTIWEQSGRKPL*KRLRFL Trigger: CAAAAACCTCAAGCGTTTTCAGAGTGGTTTTCTTCC...GCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAGGAAGAAAACCACTCTaGAAACGCTTGAGGTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LQRAQTLSELCVLRKVERGRKPL*KRLRFL Trigger: CAAAAACCTCAAGCGTTTTCAGAGTGGTTTTCTTCC...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAAGCCCAGCCCAGCTGTaGTTTTTGCATTTATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQRAQTLSELCVLRKVERSPAQL*FLHLLK Trigger: TTTCAATAAATGCAAAAATCACAGCTGGGCTGGGCT...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATTTCTGTTGGCTGGAACCACAGCATAAATCATAGCAAAGCAATTCTGGTCCCTATTCTACATATCTaGAACCAGTCATTAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: GISVGWNHSINHSKAILVPILHI*NQSLDS Trigger: GGAATCTAATGACTGGTTTCAGATATGTAGAATAGG...GACCAGAATTGCTTTGCTATGATTTATGCTGTGGTTCCAGCCAACAGAAATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGCCAGCCTTTGCAGTCTaGAACCGAAAACCTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: LPHLMHLPLKAVKHINWKPAFAV*NRKPFK Trigger: CTTAAAAGGTTTTCGGTTTCAGACTGCAAAGGCTGG...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AACCACAGCATAAATCATAGCAAAGCAATTCTGGTCTTCTGCAGGGTGTGTTCATGGAGCTGTCTGTCTTaGTTTTCTTCCTCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: NHSINHSKAILVFCRVCSWSCLS*FSSSFD Trigger: ATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCA...TGAACACACCCTGCAGAAGACCAGAATTGCTTTGCTATGATTTATGCTGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAAGCCCAGCCCAGCTGTaGTTTTTGCATTTATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: KGRKSMLRFSIQRYTIWESPAQL*FLHLLK Trigger: TTTCAATAAATGCAAAAATCACAGCTGGGCTGGGCT...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR CAA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTaGTTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGT | + |
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Preference number: 2 (lower is better) Translates to: RLRFLLLLLLLLLLL*FTQASSETLHDPDC Trigger: ACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAGATTGTGTTTTTCTCTaGATCTGTATGTCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEDCVFL*ICMSAC Trigger: ACAAGCAGACATACAGATCCAGAGAAAAACACAATC...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR CAA 90 bp | AAACGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTaGTTGTTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: KRLRFLLLLLLLLLL*LFTQASSETLHDPD Trigger: ATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGATTGTGTTTTTCTCTaGATCTGTATGTCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTDCVFL*ICMSAC Trigger: ACAAGCAGACATACAGATCCAGAGAAAAACACAATC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR GCA 72 bp | GTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATaGCTCCTCCACCATCAGTCTCTGACACAGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VSADCQSPLMST*LLHHQSLTQPS Trigger: GCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTTTGTTGTTGTTGTTGTaGTTTACCCAAGCAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCLLLLL*FTQASS Trigger: AGAACTTGCTTGGGTAAACAACAACAACAACAACAA...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTAAACGCTTGAGGTTTTaGTTGTTGTTGTTGTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCKRLRF*LLLLLL Trigger: CAACAACAACAACAACAACAAAAACCTCAAGCGTTT...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGCGCTTGAGGTTTTTGTaGTTGTTGTTGTTGTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLRLRFL*LLLLLL Trigger: CAACAACAACAACAACAACAACAAAAACCTCAAGCG...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR TCA 72 bp | TGGGATCGGTCCTGCATGCACTGGAGCTGTCTGTCTTaGTTTTCTTCCTCATTTGATGCACCTGCCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WDRSCMHWSCLS*FSSSFDAPAFK Trigger: TTTAAAGGCAGGTGCATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCAGTGCATGCAGGACCGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR CCA 72 bp | ACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTaGAACCACAGCATAAATCATAGCAAAGCAATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLAYSSGISVG*NHSINHSKAIL Trigger: CAGAATTGCTTTGCTATGATTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCCGCTTGAGGTTTTTGTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HIKEAVSADCQSPLMSTCRLRFL*LLLLLL Trigger: CAACAACAACAACAACAACAACAAAAACCTCAAGCG...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCATAAACGCTTGAGGTTTTTGTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NQSRILLRHFCWLEPQHKRLRFL*LLLLLL Trigger: CAACAACAACAACAACAACAACAAAAACCTCAAGCG...TTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR CCA 72 bp | AGTATGCTGAGGTTTTCCATCCAACGGTATACCATATaGGAACAAAGCACACTGCACATAAAAGAAGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: SMLRFSIQRYTI*EQSTLHIKEAV Trigger: GACGGCTTCTTTTATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCAAACGCTTGAGGTTTTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HIKEAVSADCQSPLMSTCKRLRF*LLLLLL Trigger: CAACAACAACAACAACAACAAAAACCTCAAGCGTTT...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR TCA 72 bp | GTATTAGCTTTCAAAACAATCCTACAGGTCGCCAACTaGGACATAAAGCTGAACAAACGCTGTGCGCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLAFKTILQVAN*DIKLNKRCALS Trigger: AGATAGCGCACAGCGTTTGTTCAGCTTTATGTCTCAGTTGGCGACCTGTAGGATTGTTTTGAAAGCTAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR TCA 72 bp | GAGCTGTGTGTTTTACGAAAGGTAGAAAGAGTATGCTaGGGTTTTCCATCCAACGGTATACCATATGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ELCVLRKVERVC*GFPSNGIPYGN Trigger: GTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTTCGTAAAACACACAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATGGAGATGTTTCTGTGTaGTTATTAAATGCCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PYMTQIVFFSGSVCLLVNGDVSV*LLNAFP Trigger: CGGGAAGGCATTTAATAACAACACAGAAACATCTCC...ATTCACAAGCAGACATACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAGGAGATGTTTCTGTGTaGTTATTAAATGCCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEGDVSV*LLNAFP Trigger: CGGGAAGGCATTTAATAACAACACAGAAACATCTCC...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGGGAGATGTTTCTGTGTaGTTATTAAATGCCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LPHLMHLPLKAVKHINWKGDVSV*LLNAFP Trigger: CGGGAAGGCATTTAATAACAACACAGAAACATCTCC...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCACAGCATAAATCATAGCAAAGCAATTCTGGTCTTCTGCAGGGTGTGTTCAAAACGCTTGAGGTTTTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NHSINHSKAILVFCRVCSKRLRF*LLLLLL Trigger: CAACAACAACAACAACAACAAAAACCTCAAGCGTTT...TGAACACACCCTGCAGAAGACCAGAATTGCTTTGCTATGATTTATGCTGTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGGAGATGTTTCTGTGTaGTTATTAAATGCCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTGDVSV*LLNAFP Trigger: CGGGAAGGCATTTAATAACAACACAGAAACATCTCC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGCGCTTGAGGTTTTTGTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPHLMHLPLKAVKHINWKRLRFL*LLLLLL Trigger: CAACAACAACAACAACAACAACAAAAACCTCAAGCG...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAGATTTTCTTCCTCATTaGATGCACCTGCCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEDFLPH*MHLPLK Trigger: TTTTAAAGGCAGGTGCATCAAATGAGGAAGAAAATC...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR TCA 72 bp | AAGCAGTCAAACACATTAATTGGAAGAAAACCACTCTaGAAACGCTTGAGGTTTTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQSNTLIGRKPL*KRLRFLLLLLL Trigger: CAACAACAACAACAACAAAAACCTCAAGCGTTTTCAGAGTGGTTTTCTTCCAATTAATGTGTTTGACTGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR GCA 72 bp | TGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATaGACGTGTTTGCTTCATGATAATTTTCTAATATGC | + |
|
Preference number: 3 (lower is better) Translates to: CVFLWICMSACE*TCLLHDNFLIC Trigger: GCATATTAGAAAATTATCATGAAGCAAACACGTGCATTCACAAGCAGACATACAGATCCAGAGAAAAACACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGGGTGTCCCAGGCTGGTaGCCGCCAGCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMGVPGW*PPAAAA Trigger: GGCTGCTGCTGCTGGCGGCCACCAGCCTGGGACACC...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGTCGCCAAGCCGTCGATaGAATTGTGGAGGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLSPSRR*NCGGHH Trigger: GTGATGCCCTCCACAATTTCATCGACGGCTTGGCGA...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTTGTTGCCCACCAAAATaGCGAAAGCTAGTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCCCPPK*RKLVPR Trigger: ACGTGGGACTAGCTTTCGGCATTTTGGTGGGCAACA...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAGGTGTCCCAGGCTGGTaGCCGCCAGCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQRAQTLSELCVLRKVERGVPGW*PPAAAA Trigger: GGCTGCTGCTGCTGGCGGCCACCAGCCTGGGACACC...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCTGGTTGAAGTGCAGCTaGCCCAGGTCCAGCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKQSQSMARLSSNQSRILWLKCS*PRSSAP Trigger: GGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCA...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTTGCTCATTCCTGCATTaGGCAAGATCACAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCCSFLH*ARSQSP Trigger: GGGACTTTGTGATCTTGCTCAATGCAGGAATGAGCA...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCACACTGCACATACCGACAGGCTCCGGTTaGCGCCGAACACGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRFSIQRYTIWEQSTLHIPTGSG*RRTRSA Trigger: TGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGG...TATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AACCACAGCATAAATCATAGCAAAGCAATTCTGGTCTTCTGCAGGGTGTGTTCACCGACAGGCTCCGGTTaGCGCCGAACACGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHSINHSKAILVFCRVCSPTGSG*RRTRSA Trigger: TGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGG...TGAACACACCCTGCAGAAGACCAGAATTGCTTTGCTATGATTTATGCTGTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCAAACACTGGTTGAAGTaGAGCTGGCCCAGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKQSQSMARLSSNQSRILKHWLK*SWPRSS Trigger: GCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTT...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAAACACTGGTTGAAGTaGAGCTGGCCCAGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMKHWLK*SWPRSS Trigger: GCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTT...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGCAATTCGATGTCTCCTaGGTACAAGGTGATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLQFDVS*VQGDEQ Trigger: CTGCTCATCACCTTGTACGCAGGAGACATCGAATTG...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGGTGTCCCAGGCTGGTaGCCGCCAGCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTGVPGW*PPAAAA Trigger: GGCTGCTGCTGCTGGCGGCCACCAGCCTGGGACACC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTGCCTCTGGAATAAGCTaGAAAATGGCGTTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCASGIS*KMAFEK Trigger: TTTCTCAAACGCCATTTTCCAGCTTATTCCAGAGGC...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTAACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGGGGCATCACAAAGCGTaGTCATCCAGGCAATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNQSRILLRHFCWLEPQGHHKA*SSRQLF Trigger: GAACAATTGCCTGGATGATCACGCTTTGTGATGCCC...CTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTTAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTGGGATTAAATCCAAATaGCTCTGGAATAAGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCGIKSK*LWNKLE Trigger: TTCCAGCTTATTCCAGAGGCATTTGGATTTAATCCC...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATTGGTTGAAGTGCAGCTaGCCCAGGTCCAGCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PYMTQIVFFSGSVCLLVNWLKCS*PRSSAP Trigger: GGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCA...ATTCACAAGCAGACATACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTAACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCCGTCGATGAAATTGTaGAGGGCATCACAAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNQSRILLRHFCWLEPQPSMKL*RASQSV Trigger: CACGCTTTGTGATGCCCTCCACAATTTCATCGACGG...CTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTTAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCTGTTGCCCACCAAAATaGCGAAAGCTAGTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TKQSQSMARLSSNQSRILCCPPK*RKLVPR Trigger: ACGTGGGACTAGCTTTCGGCATTTTGGTGGGCAACA...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGGTTGAAGTGCAGCTaGCCCAGGTCCAGCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVWLKCS*PRSSAP Trigger: GGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCA...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGGACGTACTGAGCCCCTaGAGAAGAGACAAAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMDVLSP*RRDKVQ Trigger: TTGTACTTTGTCTCTTCTTCAGGGGCTCAGTACGTC...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCTGCTCATTCCTGCATTaGGCAAGATCACAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKQSQSMARLSSNQSRILCSFLH*ARSQSP Trigger: GGGACTTTGTGATCTTGCTCAATGCAGGAATGAGCA...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGTGCTCATTCCTGCATTaGGCAAGATCACAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMCSFLH*ARSQSP Trigger: GGGACTTTGTGATCTTGCTCAATGCAGGAATGAGCA...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCCAATTCGATGTCTCCTaGGTACAAGGTGATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIKEAVSADCQSPLMSTCQFDVS*VQGDEQ Trigger: CTGCTCATCACCTTGTACGCAGGAGACATCGAATTG...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCTGGTTGAAGTGCAGCTaGCCCAGGTCCAGCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTWLKCS*PRSSAP Trigger: GGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCA...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGTCGCCAAGCCGTCGATaGAATTGTGGAGGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTQASSETLHDPDCVFLWSPSRR*NCGGHH Trigger: GTGATGCCCTCCACAATTTCATCGACGGCTTGGCGA...CCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | CCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATAAACACTGGTTGAAGTaGAGCTGGCCCAGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYMTQIVFFSGSVCLLVNKHWLK*SWPRSS Trigger: GCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTT...ATTCACAAGCAGACATACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAAAACACTGGTTGAAGTaGAGCTGGCCCAGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEKHWLK*SWPRSS Trigger: GCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTT...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCTGGGAGCAAAATTGTTaGCCACCAAAATGCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIKEAVSADCQSPLMSTCWEQNC*PPKCRK Trigger: CTTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCA...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTTCTGTTGGCTGGAACCACAGCATAAATCATAGCAAAGCAATTCTGGTCCTTCAGACAGGTACATaGGCTTGGCTCTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GISVGWNHSINHSKAILVLQTGT*AWLCFS Trigger: GGAAAAACAGAGCCAAGCTCATGTACCTGTCTGAAG...GACCAGAATTGCTTTGCTATGATTTATGCTGTGGTTCCAGCCAACAGAAATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCACACTGCACATACTTCAGACAGGTACATaGGCTTGGCTCTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFSIQRYTIWEQSTLHILQTGT*AWLCFS Trigger: GGAAAAACAGAGCCAAGCTCATGTACCTGTCTGAAG...TATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAGGGCATCACAAAGCGTaGTCATCCAGGCAATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQRAQTLSELCVLRKVERGHHKA*SSRQLF Trigger: GAACAATTGCCTGGATGATCACGCTTTGTGATGCCC...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGTCGCCAAGCCGTCGATaGAATTGTGGAGGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPHLMHLPLKAVKHINWKSPSRR*NCGGHH Trigger: GTGATGCCCTCCACAATTTCATCGACGGCTTGGCGA...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAATGCTCATTCCTGCATTaGGCAAGATCACAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQRAQTLSELCVLRKVECSFLH*ARSQSP Trigger: GGGACTTTGTGATCTTGCTCAATGCAGGAATGAGCA...TTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTATGTTGCCCACCAAAATaGCGAAAGCTAGTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWRCFCVVIKCLPALTLCCPPK*RKLVPR Trigger: ACGTGGGACTAGCTTTCGGCATTTTGGTGGGCAACA...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTACAATTCGATGTCTCCTaGGTACAAGGTGATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRLQRAQTLSELCVLRKVQFDVS*VQGDEQ Trigger: CTGCTCATCACCTTGTACGCAGGAGACATCGAATTG...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAACTATTTCTGACAGTTTaGGCCCCTTCAGACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQRAQTLSELCVLRKVELFLTV*APSDRY Trigger: GTACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAG...TTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCCAAAGTCATCATTCCTaGAGTGAGTATGGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HIKEAVSADCQSPLMSTCQSHHS*SEYGHS Trigger: AGAATGACCATACTCACTTCAGGAATGATGACTTTG...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAAATTGTTCCTATTTCTaGCAGTTTGGGCCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRLQRAQTLSELCVLRKVNCSYF*QFGPLQ Trigger: CTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATT...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGGGGCATCACAAAGCGTaGTCATCCAGGCAATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTQASSETLHDPDCVFLWGHHKA*SSRQLF Trigger: GAACAATTGCCTGGATGATCACGCTTTGTGATGCCC...CCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCTCGCCAAGCCGTCGATaGAATTGTGGAGGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTSPSRR*NCGGHH Trigger: GTGATGCCCTCCACAATTTCATCGACGGCTTGGCGA...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCACCAAACACAGCAACTaGTTTCTCAACGTAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKQSQSMARLSSNQSRILTKHSN*FLNVIV Trigger: GACAATTACGTTGAGAAAGCAGTTGCTGTGTTTGGT...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAATGTTGCCCACCAAAATaGCGAAAGCTAGTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWECCPPK*RKLVPR Trigger: ACGTGGGACTAGCTTTCGGCATTTTGGTGGGCAACA...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCAAATCCAAATGCCTCTaGAATAAGCTGGAAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIKEAVSADCQSPLMSTCKSKCL*NKLENG Trigger: GCCATTTTCCAGCTTATTCCAGAGGCATTTGGATTT...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACCGTCGATGAAATTGTaGAGGGCATCACAAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEPSMKL*RASQSV Trigger: CACGCTTTGTGATGCCCTCCACAATTTCATCGACGG...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMNIPAF*IMKKVK Trigger: TTTCACCTTCTTCATGATCCAGAATGCAGGGATGTT...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGTATCTGGGTGACATTTaGGAAACCATGAAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STLHIKEAVSADCQSPLMYLGDI*ETMKRK Trigger: TTTTCTCTTCATGGTTTCTCAAATGTCACCCAGATA...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTACTGGAAAATGGCGTTTaGGAAAAGAGTCCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWRCFCVVIKCLPALTLLENGV*EKSPNS Trigger: GCTATTGGGACTCTTTTCTCAAACGCCATTTTCCAG...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGCTTCAGACAGGTACATaGGCTTGGCTCTGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTQASSETLHDPDCVFLWLQTGT*AWLCFS Trigger: GGAAAAACAGAGCCAAGCTCATGTACCTGTCTGAAG...CCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTAAATTGTTCCTATTTCTaGCAGTTTGGGCCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLWRCFCVVIKCLPALTLNCSYF*QFGPLQ Trigger: CTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATT...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAATCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGGACGTACTGAGCCCCTaGAGAAGAGACAAAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLWRCFCVVIKCLPALDVLSP*RRDKVQ Trigger: TTGTACTTTGTCTCTTCTTCAGGGGCTCAGTACGTC...CAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCTGGGAGCAAAATTGTTaGCCACCAAAATGCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKSMLRFSIQRYTIWEQSWEQNC*PPKCRK Trigger: CTTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCA...GCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAATTCGATGTCTCCTaGGTACAAGGTGATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEQFDVS*VQGDEQ Trigger: CTGCTCATCACCTTGTACGCAGGAGACATCGAATTG...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAATTCGAGCTGGTTATCTaGGTGACATTTGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLQRAQTLSELCVLRKVEFELVI*VTFEKP Trigger: TGGTTTCTCAAATGTCACCCAGATAACCAGCTCGAA...TTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGCCTCTGGAATAAGCTaGAAAATGGCGTTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRLQRAQTLSELCVLRKVASGIS*KMAFEK Trigger: TTTCTCAAACGCCATTTTCCAGCTTATTCCAGAGGC...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATCTATTTCTGACAGTTTaGGCCCCTTCAGACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PYMTQIVFFSGSVCLLVNLFLTV*APSDRY Trigger: GTACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAG...ATTCACAAGCAGACATACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAATCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGCTATTTCTGACAGTTTaGGCCCCTTCAGACAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLWRCFCVVIKCLPALLFLTV*APSDRY Trigger: GTACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAG...CAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTACCGTCGATGAAATTGTaGAGGGCATCACAAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVPSMKL*RASQSV Trigger: CACGCTTTGTGATGCCCTCCACAATTTCATCGACGG...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAAATTGTTCCTATTTCTaGCAGTTTGGGCCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWENCSYF*QFGPLQ Trigger: CTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATT...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | TTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGTGGGAGCAAAATTGTTaGCCACCAAAATGCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTQASSETLHDPDCVFLWWEQNC*PPKCRK Trigger: CTTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCA...CCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | GGCATTTCTGTTGGCTGGAACCACAGCATAAATCATAGCAAAGCAATTCTGGTCCTCTGGAAACATATCTaGCAGAGAAATGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GISVGWNHSINHSKAILVLWKHI*QRNVEE Trigger: TTCCTCTACATTTCTCTGGCAGATATGTTTCCAGAG...GACCAGAATTGCTTTGCTATGATTTATGCTGTGGTTCCAGCCAACAGAAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTACTCTGGAAACATATCTaGCAGAGAAATGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DRLQRAQTLSELCVLRKVLWKHI*QRNVEE Trigger: TTCCTCTACATTTCTCTGGCAGATATGTTTCCAGAG...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCTTCGAGCTGGTTATCTaGGTGACATTTGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RKSMLRFSIQRYTIWEQSFELVI*VTFEKP Trigger: TGGTTTCTCAAATGTCACCCAGATAACCAGCTCGAA...GCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGATTCGAGCTGGTTATCTaGGTGACATTTGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQRAQTLSELCVLRKVERFELVI*VTFEKP Trigger: TGGTTTCTCAAATGTCACCCAGATAACCAGCTCGAA...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCACACTGCACATAAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRFSIQRYTIWEQSTLHINIPAF*IMKKVK Trigger: TTTCACCTTCTTCATGATCCAGAATGCAGGGATGTT...TATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR CAA 72 bp | TGCACTGGAGCTGTCTGTCTTGATTTTCTTCCTCATTaGATGCACCTGCCTTTAAAAGCAGTCAAACACATT | + |
|
Preference number: 4 (lower is better) Translates to: CTGAVCLDFLPH*MHLPLKAVKHI Trigger: AATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAGAAAATCAAGACAGACAGCTCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCCAAAGTCATCATTCCTaGAGTGAGTATGGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSMLRFSIQRYTIWEQSQSHHS*SEYGHS Trigger: AGAATGACCATACTCACTTCAGGAATGATGACTTTG...GCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTACAAAGTCATCATTCCTaGAGTGAGTATGGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLWRCFCVVIKCLPALTLQSHHS*SEYGHS Trigger: AGAATGACCATACTCACTTCAGGAATGATGACTTTG...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGAATTGTTCCTATTTCTaGCAGTTTGGGCCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPHLMHLPLKAVKHINWKNCSYF*QFGPLQ Trigger: CTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATT...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGACGTACTGAGCCCCTaGAGAAGAGACAAAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTDVLSP*RRDKVQ Trigger: TTGTACTTTGTCTCTTCTTCAGGGGCTCAGTACGTC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGGGAGCAAAATTGTTaGCCACCAAAATGCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVWEQNC*PPKCRK Trigger: CTTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCA...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGACTCTGGAAACATATCTaGCAGAGAAATGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQRAQTLSELCVLRKVERLWKHI*QRNVEE Trigger: TTCCTCTACATTTCTCTGGCAGATATGTTTCCAGAG...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AACCACAGCATAAATCATAGCAAAGCAATTCTGGTCTTCTGCAGGGTGTGTTCACTCTGGAAACATATCTaGCAGAGAAATGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHSINHSKAILVFCRVCSLWKHI*QRNVEE Trigger: TTCCTCTACATTTCTCTGGCAGATATGTTTCCAGAG...TGAACACACCCTGCAGAAGACCAGAATTGCTTTGCTATGATTTATGCTGTGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTAAAATCCAAATGCCTCTaGAATAAGCTGGAAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWRCFCVVIKCLPALTLKSKCL*NKLENG Trigger: GCCATTTTCCAGCTTATTCCAGAGGCATTTGGATTT...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCCTGGAAAATGGCGTTTaGGAAAAGAGTCCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTLENGV*EKSPNS Trigger: GCTATTGGGACTCTTTTCTCAAACGCCATTTTCCAG...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATTCGAGCTGGTTATCTaGGTGACATTTGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVFELVI*VTFEKP Trigger: TGGTTTCTCAAATGTCACCCAGATAACCAGCTCGAA...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTAGCCTCTGGAATAAGCTaGAAAATGGCGTTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVASGIS*KMAFEK Trigger: TTTCTCAAACGCCATTTTCCAGCTTATTCCAGAGGC...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGGCCTCTGGAATAAGCTaGAAAATGGCGTTTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPHLMHLPLKAVKHINWKASGIS*KMAFEK Trigger: TTTCTCAAACGCCATTTTCCAGCTTATTCCAGAGGC...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAATCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGAAATCCAAATGCCTCTaGAATAAGCTGGAAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLWRCFCVVIKCLPALKSKCL*NKLENG Trigger: GCCATTTTCCAGCTTATTCCAGAGGCATTTGGATTT...CAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWENIPAF*IMKKVK Trigger: TTTCACCTTCTTCATGATCCAGAATGCAGGGATGTT...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAATATCTGGGTGACATTTaGGAAACCATGAAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEYLGDI*ETMKRK Trigger: TTTTCTCTTCATGGTTTCTCAAATGTCACCCAGATA...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTAACCAAACACAGCAACTaGTTTCTCAACGTAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVTKHSN*FLNVIV Trigger: GACAATTACGTTGAGAAAGCAGTTGCTGTGTTTGGT...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| 3UTR CAA 72 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTaGTTGTTGTTGTTTACCCAAGCAAGTTCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLL*LLLFTQASSET Trigger: GGTTTCAGAACTTGCTTGGGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCCAAAGTCATCATTCCTaGAGTGAGTATGGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTQSHHS*SEYGHS Trigger: AGAATGACCATACTCACTTCAGGAATGATGACTTTG...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR GCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCACCAAACACAGCAACTaGTTTCTCAACGTAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTTKHSN*FLNVIV Trigger: GACAATTACGTTGAGAAAGCAGTTGCTGTGTTTGGT...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS-3UTR CCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCAAATCCAAATGCCTCTaGAATAAGCTGGAAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTKSKCL*NKLENG Trigger: GCCATTTTCCAGCTTATTCCAGAGGCATTTGGATTT...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS-3UTR CCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTNIPAF*IMKKVK Trigger: TTTCACCTTCTTCATGATCCAGAATGCAGGGATGTT...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCTATCTGGGTGACATTTaGGAAACCATGAAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTYLGDI*ETMKRK Trigger: TTTTCTCTTCATGGTTTCTCAAATGTCACCCAGATA...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| 3UTR CAA 72 bp | AAACGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTaGTTGTTGTTGTTGTTTACCCAAGCAAGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRLRFLLLLLLL*LLLLFTQASSE Trigger: TTCAGAACTTGCTTGGGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS GCA 90 bp | CCCTGCTGGGATGCAGCCCCCAGACGCTCCAGCAGGCGCCCCAGCTaGGCGGCCGACAGGCTCCGGTTGGCGCCGAACACGCTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PCWDAAPRRSSRRPS*AADRLRLAPNTLST Trigger: TGTGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGCCGCGCAGCTGGGGCGCCTGCTGGAGCGTCTGGGGGCTGCATCCCAGCAGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS TCA 90 bp | CCGACAGGCTCCGGTTGGCGCCGAACACGCTCAGCACATCCTCACTaGAGGCGAGCTCCGGTCCCTCCGAGGGGTGTCCCAGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTGSGWRRTRSAHPH*RRAPVPPRGVPGWW Trigger: CCACCAGCCTGGGACACCCCTCGGAGGGACCGGAGCTCGCCTTCAGTGAGGATGTGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS GCA 90 bp | GACAAACACTGGTTGAAGTGCAGCTGGCCCAGGTCCAGCGCTCCCTaGTGGGATGCAGCCCCCAGACGCTCCAGCAGGCGCCCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DKHWLKCSWPRSSAP*WDAAPRRSSRRPSC Trigger: GCAGCTGGGGCGCCTGCTGGAGCGTCTGGGGGCTGCATCCCAGCAGGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTTGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLADRLR*APNTLS Trigger: GCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGC...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGCACATGCCTCCTCCACCATCAGTCTCTGACACAGCCCAGCCCAGCTGTCACGCGGAGAGGAAGTaGAACAGCAAGGCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NEHMPPPPSVSDTAQPSCHAERK*NSKACR Trigger: CCGGCAAGCCTTGCTGTTCAACTTCCTCTCCGCGTG...ACAGCTGGGCTGGGCTGTGTCAGAGACTGATGGTGGAGGAGGCATGTGCTCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTAGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLWRCFCVVIKCLPALTLADRLR*APNTLS Trigger: GCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGC...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS TCA 90 bp | AGAAACCATGAAGAGAAAAGATGTCTTCTGCTGACAAACACTGGTTaGAGTGCAGCTGGCCCAGGTCCAGCGCTCCCTGCTGGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RNHEEKRCLLLTNTG*SAAGPGPALPAGMQ Trigger: CTGCATCCCAGCAGGGAGCGCTGGACCTGGGCCAGCTGCACTTCAACCAGTGTTTGTCAGCAGAAGACATCTTTTCTCTTCATGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CCA 90 bp | GGCCCCTTCAGACAGGTACATGAGCTTGGCTCTGTTTTTCCATCCTaGAGGGATACAACGCTGACAGTGTCGAAGTGGATGTGTCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GPFRQVHELGSVFPS*RDTTLTVSKWMCPL Trigger: TAACGGACACATCCACTTCGACACTGTCAGCGTTGTATCCCTCCAGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTCTGAAGGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTAGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQVLKPYMTQIVFFSGSVADRLR*APNTLS Trigger: GCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGC...TACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPHLMHLPLKAVKHINWKADRLR*APNTLS Trigger: GCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGC...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGCCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLPISDS*GPFRQV Trigger: TACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGG...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGAGGAGAGAGGCCAGATaGATAATTGTCACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLRREAR*IIVTDR Trigger: CCTGTCAGTGACAATTATCAATCTGGCCTCTCTCCT...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGGTGCTCATTCCTGCATaGAGCAAGATCACAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLVLIPA*SKITKS Trigger: GGACTTTGTGATCTTGCTCAATGCAGGAATGAGCAC...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCTGTTGGCTGGAACCACAGCATAAATCATAGCAAAGCAATTCTGGTCCACGCGGAGAGGAAGTaGAACAGCAAGGCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GISVGWNHSINHSKAILVHAERK*NSKACR Trigger: CCGGCAAGCCTTGCTGTTCAACTTCCTCTCCGCGTG...GACCAGAATTGCTTTGCTATGATTTATGCTGTGGTTCCAGCCAACAGAAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGACACGCGGAGAGGAAGTaGAACAGCAAGGCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRAQTLSELCVLRKVERHAERK*NSKACR Trigger: CCGGCAAGCCTTGCTGTTCAACTTCCTCTCCGCGTG...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCATAAACCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NQSRILLRHFCWLEPQHKPISDS*GPFRQV Trigger: TACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGG...TTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTAACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGGTGCTCATTCCTGCATaGAGCAAGATCACAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSNQSRILLRHFCWLEPQVLIPA*SKITKS Trigger: GGACTTTGTGATCTTGCTCAATGCAGGAATGAGCAC...CTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTTAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAATCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGCACGCGGAGAGGAAGTaGAACAGCAAGGCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QKSLWRCFCVVIKCLPALHAERK*NSKACR Trigger: CCGGCAAGCCTTGCTGTTCAACTTCCTCTCCGCGTG...CAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS TCA 90 bp | AGATCGCGGGGCAGATGGCAGAGAAGTTCGAGCTGGTTATCTGGGTaGCATTTGAGAAACCATGAAGAGAAAAGATGTCTTCTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSRGRWQRSSSWLSG*HLRNHEEKRCLLLT Trigger: TGTCAGCAGAAGACATCTTTTCTCTTCATGGTTTCTCAAATGTCACCCAGATAACCAGCTCGAACTTCTCTGCCATCTGCCCCGCGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCAGGAGAGAGGCCAGATaGATAATTGTCACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIKEAVSADCQSPLMSTCRREAR*IIVTDR Trigger: CCTGTCAGTGACAATTATCAATCTGGCCTCTCTCCT...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCGACAGGTACATGAGCTaGGCTCTGTTTTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TKQSQSMARLSSNQSRILDRYMS*ALFFHP Trigger: AGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTC...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AGCACACTGCACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGGACAGGTACATGAGCTaGGCTCTGTTTTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: STLHIKEAVSADCQSPLMDRYMS*ALFFHP Trigger: AGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTC...CATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTGCAGTGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACTGTCAATCACCCCTAATGAGCACATGCCTCCTCCACCATCAGTCTCTGGAAGGTGAAATCCGTTaGTCTTCCAGTTACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADCQSPLMSTCLLHHQSLEGEIR*SSSYFF Trigger: GAAAAAGTAACTGGAAGACAAACGGATTTCACCTTC...CAGAGACTGATGGTGGAGGAGGCATGTGCTCATTAGGGGTGATTGACAGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAACCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLQRAQTLSELCVLRKVEPISDS*GPFRQV Trigger: TACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGG...TTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTACCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DRLQRAQTLSELCVLRKVPISDS*GPFRQV Trigger: TACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGG...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CACATAAAAGAAGCCGTCTCTGCTGACTGTCAATCACCCCTAATGAGCACATGCTTGGGAGCAAAATTGTaGCCCACCAAAATGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HIKEAVSADCQSPLMSTCLGAKL*PTKMPK Trigger: TTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCAA...GCATGTGCTCATTAGGGGTGATTGACAGTCAGCAGAGACGGCTTCTTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCAATCCCAGAGCATGGCAAGACTGAGTTCTAACCAGTCTCGCATACTCTTGGGAGCAAAATTGTaGCCCACCAAAATGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TKQSQSMARLSSNQSRILLGAKL*PTKMPK Trigger: TTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCAA...GAGTATGCGAGACTGGTTAGAACTCAGTCTTGCCATGCTCTGGGATTGCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CCA 90 bp | GTGATGAGCAGGATGGCAGTGAAGCCGGTTAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAATCCGTTTGTCTTCCAGTTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VMSRMAVKPVNIPAF*IMKKVKSVCLPVTF Trigger: AAAAGTAACTGGAAGACAAACGGATTTCACCTTCTTCATGATCCAGAATGCAGGGATGTTAACCGGCTTCACTGCCATCCTGCTCATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTTTTCCATCCAACGGTATACCATATGGGAACAAAGCACACTGCACATAAGGAGAGAGGCCAGATaGATAATTGTCACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRFSIQRYTIWEQSTLHIRREAR*IIVTDR Trigger: CCTGTCAGTGACAATTATCAATCTGGCCTCTCTCCT...TATGTGCAGTGTGCTTTGTTCCCATATGGTATACCGTTGGATGGAAAACCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | GATCGTCTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGTGCTCATTCCTGCATaGAGCAAGATCACAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRLQRAQTLSELCVLRKVVLIPA*SKITKS Trigger: GGACTTTGTGATCTTGCTCAATGCAGGAATGAGCAC...TACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAGACGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | TTTACCCAAGCAAGTTCTGAAACCTTACATGACCCAGATTGTGTTTTTCTCTGGAGACTGGGCTTTGCGTaGTGCTTTCTTAGATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FTQASSETLHDPDCVFLWRLGFA*CFLRSS Trigger: CGAGGATCTAAGAAAGCACAACGCAAAGCCCAGTCT...CCAGAGAAAAACACAATCTGGGTCATGTAAGGTTTCAGAACTTGCTTGGGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGTCTCGCATACTCCTCAGGCATTTCTGTTGGCTGGAACCACAGCATAAAGAAGGTGAAATCCGTTaGTCTTCCAGTTACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NQSRILLRHFCWLEPQHKEGEIR*SSSYFF Trigger: GAAAAAGTAACTGGAAGACAAACGGATTTCACCTTC...TTTATGCTGTGGTTCCAGCCAACAGAAATGCCTGAGGAGTATGCGAGACTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAGACAGGTACATGAGCTaGGCTCTGTTTTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEDRYMS*ALFFHP Trigger: AGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTC...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS-3UTR CAA 90 bp | CCTTACATGACCCAGATTGTGTTTTTCTCTGGATCTGTATGTCTGCTTGTGAATGTGCTCATTCCTGCATaGAGCAAGATCACAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PYMTQIVFFSGSVCLLVNVLIPA*SKITKS Trigger: GGACTTTGTGATCTTGCTCAATGCAGGAATGAGCAC...ATTCACAAGCAGACATACAGATCCAGAGAAAAACACAATCTGGGTCATGTAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTATTGGGAGCAAAATTGTaGCCCACCAAAATGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLWRCFCVVIKCLPALTLLGAKL*PTKMPK Trigger: TTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCAA...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTATGGAGATGTTTCTGTGTTGTTATTAAATGCCTTCCCGCGTTGACGTTAATATTGGGAGCAAAATaGTTGCCCACCAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLWRCFCVVIKCLPALTLILGAK*LPTKMP Trigger: CGGCATTTTGGTGGGCAACAATTTTGCTCCCAATAT...TAACGTCAACGCGGGAAGGCATTTAATAACAACACAGAAACATCTCCATAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTAGAAAGAGTATGCTGAGGTTTTCCATCCAACGGTATACCATATGGGAAATATTGGGAGCAAAATaGTTGCCCACCAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KGRKSMLRFSIQRYTIWEILGAK*LPTKMP Trigger: CGGCATTTTGGTGGGCAACAATTTTGCTCCCAATAT...TTCCCATATGGTATACCGTTGGATGGAAAACCTCAGCATACTCTTTCTACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS-3UTR CAA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGACAGGTACATGAGCTaGGCTCTGTTTTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTDRYMS*ALFFHP Trigger: AGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCATTTGATGCACCTGCCTTTAAAAGCAGTCAAACACATTAATTGGAAGATATTGGGAGCAAAATaGTTGCCCACCAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPHLMHLPLKAVKHINWKILGAK*LPTKMP Trigger: CGGCATTTTGGTGGGCAACAATTTTGCTCCCAATAT...CTTCCAATTAATGTGTTTGACTGCTTTTAAAGGCAGGTGCATCAAATGAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CTACAACGTGCTCAAACACTCAGTGAGCTGTGTGTTTTACGAAAGGTAGAAAGAGAAGGTGAAATCCGTTaGTCTTCCAGTTACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRAQTLSELCVLRKVEREGEIR*SSSYFF Trigger: GAAAAAGTAACTGGAAGACAAACGGATTTCACCTTC...TCTTTCTACCTTTCGTAAAACACACAGCTCACTGAGTGTTTGAGCACGTTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCTTGGGAGCAAAATTGTaGCCCACCAAAATGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTLGAKL*PTKMPK Trigger: TTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCAA...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS-3UTR CAA 90 bp | CGCTTGAGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTACCGAAGGTGAAATCCGTTaGTCTTCCAGTTACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRFLLLLLLLLLLLLFTEGEIR*SSSYFF Trigger: GAAAAAGTAACTGGAAGACAAACGGATTTCACCTTC...GGTAAACAACAACAACAACAACAACAACAACAACAACAACAAAAACCTCAAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS GCA 72 bp | GATGCAGCCCCCAGACGCTCCAGCAGGCGCCCCAGCTaGGCGGCCGACAGGCTCCGGTTGGCGCCGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: DAAPRRSSRRPS*AADRLRLAPNT Trigger: CGTGTTCGGCGCCAACCGGAGCCTGTCGGCCGCGCAGCTGGGGCGCCTGCTGGAGCGTCTGGGGGCTGCATC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS GCA 72 bp | GTGCAGCTGGCCCAGGTCCAGCGCTCCCTGCTGGGATaGAGCCCCCAGACGCTCCAGCAGGCGCCCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VQLAQVQRSLLG*SPQTLQQAPQL Trigger: CAGCTGGGGCGCCTGCTGGAGCGTCTGGGGGCTGCATCCCAGCAGGGAGCGCTGGACCTGGGCCAGCTGCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS CAA 90 bp | AGACGCTCCAGCAGGCGCCCCAGCTGCGCGGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGCACATCCTCACTGAAGGCGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRSSRRPSCAADRLR*APNTLSTSSLKASS Trigger: GGAGCTCGCCTTCAGTGAGGATGTGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGCCGCGCAGCTGGGGCGCCTGCTGGAGCGTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CAA 72 bp | AGCAGGCGCCCCAGCTGCGCGGCCGACAGGCTCCGGTaGGCGCCGAACACGCTCAGCACATCCTCACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRPSCAADRLR*APNTLSTSSLK Trigger: CTTCAGTGAGGATGTGCTGAGCGTGTTCGGCGCCAACCGGAGCCTGTCGGCCGCGCAGCTGGGGCGCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS TCA 72 bp | TCCGGTTGGCGCCGAACACGCTCAGCACATCCTCACTaGAGGCGAGCTCCGGTCCCTCCGAGGGGTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGWRRTRSAHPH*RRAPVPPRGVP Trigger: TGGGACACCCCTCGGAGGGACCGGAGCTCGCCTTCAGTGAGGATGTGCTGAGCGTGTTCGGCGCCAACCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS TCA 72 bp | CTAGTCCCACGTAGCAGGAACACGCGGAGAGGAAGTTaGACAGCAAGGCTTGCCGGGTGCTCATTCCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPRSRNTRRGS*TARLAGCSFLH Trigger: ATGCAGGAATGAGCACCCGGCAAGCCTTGCTGTTCAACTTCCTCTCCGCGTGTTCCTGCTACGTGGGACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS TCA 72 bp | TCCTCACACAGGATCGCTATGGACGTACTGAGCCCCTaGAGAAGAGACAAAGTACAAGATGCCCCAATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSHRIAMDVLSP*RRDKVQDAPIA Trigger: GGCGATTGGGGCATCTTGTACTTTGTCTCTTCTTCAGGGGCTCAGTACGTCCATAGCGATCCTGTGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CCA 72 bp | CTGACAGGAATCCATAGCCCCAGACTTCGGAAAGACTaGGCTTTGCGTTGTGCTTTCTTAGATCCTCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTGIHSPRLRKD*ALRCAFLDPRR Trigger: CCTGCGAGGATCTAAGAAAGCACAACGCAAAGCCCAGTCTTTCCGAAGTCTGGGGCTATGGATTCCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CAA 90 bp | TCACTGACAGGAATCCATAGCCCCAGACTTCGGAAAGACTGGGCTTaGCGTTGTGCTTTCTTAGATCCTCGCAGGGATGGAAGTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLTGIHSPRLRKDWA*RCAFLDPRRDGSSA Trigger: AGCTGAACTTCCATCCCTGCGAGGATCTAAGAAAGCACAACGCAAAGCCCAGTCTTTCCGAAGTCTGGGGCTATGGATTCCTGTCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS TCA 72 bp | GAGGAAACTCCTCACACAGGATCGCTATGGACGTACTaGGCCCCTGAAGAAGAGACAAAGTACAAGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EETPHTGSLWTY*APEEETKYKMP Trigger: GGGCATCTTGTACTTTGTCTCTTCTTCAGGGGCTCAGTACGTCCATAGCGATCCTGTGTGAGGAGTTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CCA 72 bp | AGACAGGTACATGAGCTTGGCTCTGTTTTTCCATCCTaGAGGGATACAACGCTGACAGTGTCGAAGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RQVHELGSVFPS*RDTTLTVSKWM Trigger: CATCCACTTCGACACTGTCAGCGTTGTATCCCTCCAGGATGGAAAAACAGAGCCAAGCTCATGTACCTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CAA 72 bp | GTGATCATCCAGGCAATTGTTCCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTACATGAGCTTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VIIQAIVPISDS*GPFRQVHELGS Trigger: AGAGCCAAGCTCATGTACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATTGCCTGGATGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
||
| CDS CAA 90 bp | TCACAAAGCGTGATCATCCAGGCAATTGTTCCTATTTCTGACAGTTaGGGCCCCTTCAGACAGGTACATGAGCTTGGCTCTGTTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQSVIIQAIVPISDS*GPFRQVHELGSVFP Trigger: TGGAAAAACAGAGCCAAGCTCATGTACCTGTCTGAAGGGGCCCAAACTGTCAGAAATAGGAACAATTGCCTGGATGATCACGCTTTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS CCA 72 bp | AGGATGGCAGTGAAGCCGGTTAACATCCCTGCATTCTaGATCATGAAGAAGGTGAAATCCGTTTGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RMAVKPVNIPAF*IMKKVKSVCLP Trigger: TGGAAGACAAACGGATTTCACCTTCTTCATGATCCAGAATGCAGGGATGTTAACCGGCTTCACTGCCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS CAA 72 bp | CCTCCAGCGAGTGCAAATATAATATTGGGAGCAAAATaGTTGCCCACCAAAATGCCGAAAGCTAGTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: PPASANIILGAK*LPTKMPKASPT Trigger: CGTGGGACTAGCTTTCGGCATTTTGGTGGGCAACAATTTTGCTCCCAATATTATATTTGCACTCGCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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| CDS CAA 72 bp | CCCTGCATTCTGGATCATGAAGAAGGTGAAATCCGTTaGTCTTCCAGTTACTTTTTCTCTCAGCATGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PCILDHEEGEIR*SSSYFFSQHVV Trigger: AACGACATGCTGAGAGAAAAAGTAACTGGAAGACAAACGGATTTCACCTTCTTCATGATCCAGAATGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029810.6 ENSMUST00000081978.10 ENSMUST00000167390.8 ENSMUST00000180196.8 |
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