Pregenerated sensors for SLC39A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024327Ensembl transcript IDs: ENSMUST00000025186.16, ENSMUST00000169397.9, ENSMUST00000171872.3
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATCACTAACTAGTTCAGAGGGAGATGGGCCTTGGAGGGACCCCTaGGGCACGCTGGCGCTGAGAAATCGTAGATTAGGGACCATCGGG | + |
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Preference number: 1 (lower is better) Translates to: PSLTSSEGDGPWRDP*GTLALRNRRLGTIG Trigger: CCCGATGGTCCCTAATCTACGATTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAACTAGTTAGTGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR CCA 90 bp | AAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTGGTCCTTCTaGCCTCTCATGCTCCGTATGATCCTCATACCTCTAAGGCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KSNNAAGQSPTPWSF*PLMLRMILIPLRPQ Trigger: TTGAGGCCTTAGAGGTATGAGGATCATACGGAGCATGAGAGGCCAGAAGGACCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR TCA 90 bp | CCATCGGGTAGGCTACCGTCTTCCCAGTCTTCTTCATGGTCCCATTaGTTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCC | + |
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Preference number: 1 (lower is better) Translates to: PSGRLPSSQSSSWSH*FFQKQQRCWAVSHS Trigger: GGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATCAATGGGACCATGAAGAAGACTGGGAAGACGGTAGCCTACCCGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR CCA 90 bp | GATTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTaGTCCTTCTGGCCTCTCATGCTCCGTATGATCCTCATACCTCTA | + |
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Preference number: 1 (lower is better) Translates to: DFSKSNNAAGQSPTP*SFWPLMLRMILIPL Trigger: TAGAGGTATGAGGATCATACGGAGCATGAGAGGCCAGAAGGACCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR GCA 72 bp | ACTAGTTCAGAGGGAGATGGGCCTTGGAGGGACCCCTaGGGCACGCTGGCGCTGAGAAATCGTAGATTAGGG | + |
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Preference number: 3 (lower is better) Translates to: TSSEGDGPWRDP*GTLALRNRRLG Trigger: CCCTAATCTACGATTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAACTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR CCA 72 bp | AAGCCATCACTAACTAGTTCAGAGGGAGATGGGCCTTaGAGGGACCCCTGCGGCACGCTGGCGCTGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: KPSLTSSEGDGP*RDPCGTLALRN Trigger: ATTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAACTAGTTAGTGATGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR CCA 72 bp | AACGCTGCTGGGCAGTCTCCCACTCCGTGGTCCTTCTaGCCTCTCATGCTCCGTATGATCCTCATACCTCTA | + |
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Preference number: 3 (lower is better) Translates to: NAAGQSPTPWSF*PLMLRMILIPL Trigger: TAGAGGTATGAGGATCATACGGAGCATGAGAGGCCAGAAGGACCACGGAGTGGGAGACTGCCCAGCAGCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| 3UTR CCA 72 bp | AAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTaGTCCTTCTGGCCTCTCATGCTCCGTATGATCCTC | + |
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Preference number: 3 (lower is better) Translates to: KSNNAAGQSPTP*SFWPLMLRMIL Trigger: GAGGATCATACGGAGCATGAGAGGCCAGAAGGACCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | TTCAGAGGGAGATGGGCCTTGGAGGGACCCCTGCGGCACGCTGGCGCTGAGAAACGGAGATCAGCACTGTaGCCCCCAGTGCGTAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FRGRWALEGPLRHAGAEKRRSAL*PPVRRP Trigger: GGGCCTACGCACTGGGGGCCACAGTGCTGATCTCCG...TTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | TTCAGAGGGAGATGGGCCTTGGAGGGACCCCTGCGGCACGCTGGCGCTGAGAAATCCGCCTGCAGTGAATaGCAGGACCCAGCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: FRGRWALEGPLRHAGAEKSACSE*QDPART Trigger: GGTCCTGGCTGGGTCCTGCCATTCACTGCAGGCGGA...TTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGGCAGTCTCCCACTCCGTGGTCCTTCTGGCCTCTCATGCTCCGTATGTCATGCGAGTGCCCGTaGCTGTGGCCATGGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AAGQSPTPWSFWPLMLRMSCECP*LWPWWK Trigger: TTTCCACCATGGCCACAGCCACGGGCACTCGCATGA...CATACGGAGCATGAGAGGCCAGAAGGACCACGGAGTGGGAGACTGCCCAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGACTGCCCCTCCCTCGGTaGGAAGGGCACAGGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGLPLPR*EGHRQC Trigger: GCACTGCCTGTGCCCTTCTCACCGAGGGAGGGGCAG...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCGTATGATCCTCATACCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAACCCACAGCCACCCAGTaGGGGGCCCGCAGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: PYDPHTSKASNRGSANLQPTATQ*GARRPM Trigger: CATGGGCCTGCGGGCCCCCCACTGGGTGGCTGTGGG...TTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGGTATGAGGATCATACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | TTCAGAGGGAGATGGGCCTTGGAGGGACCCCTGCGGCACGCTGGCGCTGAGAAATGGCTGTGGCCATGGTaGAAATCTTCATGTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FRGRWALEGPLRHAGAEKWLWPW*KSSCEC Trigger: GCACTCACATGAAGATTTCCACCATGGCCACAGCCA...TTTCTCAGCGCCAGCGTGCCGCAGGGGTCCCTCCAAGGCCCATCTCCCTCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGAGACCCAGCCAGGACCTaGACCACCTGCCACGTCACT | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGDPART*TTCHVT Trigger: AGTGACGTGGCAGGTGGTGCAGGTCCTGGCTGGGTC...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAAGGCTGACACTCCTTCTGCCCCACAGAGAGAATaGGGCCCTGGCCACTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLRPQTEALLISKADTPSAPQRE*GPGHCG Trigger: CCCACAGTGGCCAGGGCCCCATTCTCTCTGTGGGGC...AGAAGGAGTGTCAGCCTTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGACGTAGGCCCAGAGGGTaGCAGTGTCCAGGTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGRRPRG*QCPGGV Trigger: AACACCACCTGGACACTGTCACCCTCTGGGCCTACG...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATGGCCAGACCGTCTGTaGAGTTGTGTGCCAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGPKIQGLLFLVTVPPHPWPDRL*SCVPSQ Trigger: CTGACTTGGCACACAACTTCACAGACGGTCTGGCCA...TGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | GTGGGGCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATCGTGGCTGTGGGCATaGCCATGCCAGATGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: VGPKIQGLLFLVTVPPHPSWLWA*PCQMLS Trigger: TGAAAGCATCTGGCATGGGCATGCCCACAGCCACGA...TGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | TCTCCAAGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACCAACTGCGTGGAAATCTTCATGTaGGTGCCCGTGACTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPRLTLLLALALARTTNCVEIFM*VPVTVA Trigger: GGCCACAGTCACGGGCACTCACATGAAGATTTCCAC...GCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCTTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | CTGCTAATCTCCAAGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACCAGCACCTCCAACAGTaGCTGCAGTGGAGATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLISKADTPSGISTGQDYQHLQQ*LQWRCL Trigger: GAGGCATCTCCACTGCAGTCACTGTTGGAGGTGCTG...GTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCTTGGAGATTAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGACACGAAGAACGGAGCTaGGGAGATCAGCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGHEERS*GDQHCG Trigger: GCCACAGTGCTGATCTCCGCAGCTCCGTTCTTCGTG...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CCATTGATTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTGGTCACGTCACTGTCCACTaGCCCTCCCTCGGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLIFPKATTLLGSLPLRGHVTVH*PSLGEK Trigger: CTTCTCACCGAGGGAGGGGCAGTGGACAGTGACGTG...ACCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATCAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGAGTGGTGTTTGATGCCTaGAGCCCCAGCCTCCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGVVFDA*SPSLPR Trigger: TCTAGGGAGGCTGGGGCTCCAGGCATCAAACACCAC...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | ATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGAAGGACAGGGCCCTGGCCACTGTaGGAGTGTCCATGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISTGQDYQLPLLGVRGRTGPWPL*ECPCPG Trigger: GCCTGGACATGGACACTCCCACAGTGGCCAGGGCCC...TGTCCTTCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | GCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATTCAATCATGTGAGTGCCCGTaGCTGTGGCCATGGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: AEDPRSFIPGHRSSAPIQSCECP*LWPWKS Trigger: GGACTTCCATGGCCACAGTCACGGGCACTCACATGA...TTGAATGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CTGCTAATCTCCAAGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACAAATCTTCATGCGAGTaGCCGTGGCTGTGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LLISKADTPSGISTGQDYKSSCE*PWLWPW Trigger: CCATGGCCACAGCCACGGGCACTCGCATGAAGATTT...GTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCTTGGAGATTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CCTCAAACAGAGGCTCTGCTAATCTCCAAGGCTGACACTCCTTCTGGCATTAGCGCATCGCCTGCTTCTTaGTGCAGCCAGACTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: PQTEALLISKADTPSGISASPAS*CSQTGP Trigger: TGGTCCAGTCTGGCTGCAGCAAGAAGCAGGCGATGC...GCTAATGCCAGAAGGAGTGTCAGCCTTGGAGATTAGCAGAGCCTCTGTTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | TCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGAAGGACCTGCACCACCTaGCACGTCACTGTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SGISTGQDYQLPLLGVRGRTCTT*HVTVHC Trigger: GCAGTGGACAGTGACGTGGCAGGTGGTGCAGGTCCT...TCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAAGGCTGACACTCCTTCTTCACGTGAGTGTCCATaGTCGTGGCTGTGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: PLRPQTEALLISKADTPSSRECP*SWLWAC Trigger: GCATGCCCACAGCCACGACCATGGACACTCACGTGA...AGAAGGAGTGTCAGCCTTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | TCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGACCATGTCCTCCGTGGTaGAGGCTATCGTGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGISTGQDYQLPLLGVRGPCPPW*RLSWEW Trigger: CCACTCCCACGATAGCCTCCACCACGGAGGACATGG...TCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CTGCTAATCTCCAAGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACATGTCCAGGCTGCTCTaGAGCGTGGTGAGAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLISKADTPSGISTGQDYMSRLL*SVVRMR Trigger: CCTCATTCTCACCACGCTCCAGAGCAGCCTGGACAT...GTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCTTGGAGATTAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CTGCTAATCTCCAAGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACGCAGGACTGTCATTGTaGTCAGGATCCCTAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLISKADTPSGISTGQDYAGLSL*SGSLAL Trigger: GAGGGCTAGGGATCCTGACCACAATGACAGTCCTGC...GTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCTTGGAGATTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | GCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATTCAAGTGTGGCCGTGGCCATaGTGGAAATCTTCATGCGAG | + |
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Preference number: 4 (lower is better) Translates to: AEDPRSFIPGHRSSAPIQVWPWP*WKSSCE Trigger: CTCGCATGAAGATTTCCACCATGGCCACGGCCACAC...TTGAATGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | GCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATTCAACATGCCCATGCCAGATaGTTTCATGAGTGTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AEDPRSFIPGHRSSAPIQHAHAR*FHECGR Trigger: ACGGCCACACTCATGAAAGCATCTGGCATGGGCATG...TTGAATGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | ATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGAAGGACATCGCCTGCTTCTTGCTaGAGCCAGACTGGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ISTGQDYQLPLLGVRGRTSPASC*SQTGPG Trigger: TCCTGGTCCAGTCTGGCTGCAGCAAGAAGCAGGCGA...TGTCCTTCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | AGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATTCAAACAGTTGCAGACGCATCGCCTaGTTCTTGCTGCAGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RSKVFYSWSPFLRTHSNSCRRIA*FLLQPD Trigger: GTCTGGCTGCAGCAAGAAGCAGGCGATGCGTCTGCA...ACTGTTTGAATGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | TCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGAGAAGGGCACAGGCAGTaGCTGCCAATGCTCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: SGISTGQDYQLPLLGVRGEGHRQ*LPMLQL Trigger: CAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTC...TCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCCAGTCCTTCTGCCAGGTCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGACAGACTGGACCAGGATaGCAAAATCCCCAACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSPSARSSLKPSLTSSEGQTGPG*QNPQPH Trigger: ATGAGGTTGGGGATTTTGCCATCCTGGTCCAGTCTG...TCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGACCTGGCAGAAGGACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAAGGCTGACACTCCTTCTTTGCTGCAGCCAGACTaGACCAGGATGGCAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PLRPQTEALLISKADTPSLLQPD*TRMAKS Trigger: GGATTTTGCCATCCTGGTCCAGTCTGGCTGCAGCAA...AGAAGGAGTGTCAGCCTTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | ATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGAAGGACAAAATCCCCAACCTCATaGGGCACTTCGTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISTGQDYQLPLLGVRGRTKSPTS*GTSCSR Trigger: CCTGCTGCACGAAGTGCCTCATGAGGTTGGGGATTT...TGTCCTTCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | CCGTATGATCCTCATACCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAATGGTGGAAATCTTCATaGGAGTGCCCGTGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PYDPHTSKASNRGSANLQWWKSS*ECPWLW Trigger: CCACAGCCACGGGCACTCGCATGAAGATTTCCACCA...TTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGGTATGAGGATCATACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCGTATGATCCTCATACCTCTAAGGCCTCAAACAGAGGCTCTGCTAATCTCCAAGTGACAGTGTCCAGGTaGTGTTTGATGCCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PYDPHTSKASNRGSANLQVTVSR*CLMPGA Trigger: GGCTCCAGGCATCAAACACCACCTGGACACTGTCAC...TTGGAGATTAGCAGAGCCTCTGTTTGAGGCCTTAGAGGTATGAGGATCATACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR TCA 90 bp | TCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGAGATGGGCCTTGGAGGGACGCTGGGCTTTTCCTTTaGAGAACACTCATGTCTATC | + |
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Preference number: 4 (lower is better) Translates to: SSLKPSLTSSEGDGPWRDAGLFL*RTLMSI Trigger: GATAGACATGAGTGTTCTTCAAAGGAAAAGCCCAGC...GTCCCTCCAAGGCCCATCTCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | AGGCTGACACTCCTTCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATCAGCACAGACACTGTTaGTACGTAGATAAATCCGCC | + |
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Preference number: 4 (lower is better) Translates to: RLTLLLALALARTTNCLYQHRHC*YVDKSA Trigger: GGCGGATTTATCTACGTAGCAACAGTGTCTGTGCTG...ATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGAAGGAGTGTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | TCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGATCCCTAGAAGTCCCATaGCTATGTTCACGATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGISTGQDYQLPLLGVRGSLEVP*LCSRWA Trigger: TGCCCATCGTGAACATAGCCATGGGACTTCTAGGGA...TCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR GCA 90 bp | TCTGGCATTAGCACTGGCCAGGACTACCAACTGCCTTTATTAGGAGTTAGGGGACCTTCTCTTCCTCTGTaGTGGGCTTTTCCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGISTGQDYQLPLLGVRGPSLPL*WAFPLK Trigger: CTTCAAAGGAAAAGCCCAGCACAGAGGAAGAGAAGG...TCCCCTAACTCCTAATAAAGGCAGTTGGTAGTCCTGGCCAGTGCTAATGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCCATTGATTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTGGAGAGTTAGATTCTACTaGGATGAGGAACAGCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIDFSKSNNAAGQSPTPWRVRFY*DEEQHE Trigger: TTCGTGCTGTTCCTCATCCCAGTAGAATCTAACTCT...CCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATCAATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS-3UTR CCA 90 bp | CCATTGATTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTGGTTCTCTTCCTCTGTGCTaGGCTTTTCCTTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLIFPKATTLLGSLPLRGSLPLC*AFPLKN Trigger: GTTCTTCAAAGGAAAAGCCCAGCACAGAGGAAGAGA...ACCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATCAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS GCA 90 bp | TCCGCCTGCAGTGAATGGCAGGACCCAGCCAGGACCTGCACCACCTaGCACGTCACTGTCCACTGCCCCTCCCTCGGTGAGAAGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SACSEWQDPARTCTT*HVTVHCPSLGEKGT Trigger: TGTGCCCTTCTCACCGAGGGAGGGGCAGTGGACAGTGACGTGGCAGGTGGTGCAGGTCCTGGCTGGGTCCTGCCATTCACTGCAGGCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 90 bp | CTGTGGCCATGGAAGTCCTCTTCCACATCTTTGTGCAGGTCACCATaGCCCTCGTGTCCGGCCACCAGCAGCCCCAAAGCCGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LWPWKSSSTSLCRSP*PSCPATSSPKAAQV Trigger: GACCTGGGCGGCTTTGGGGCTGCTGGTGGCCGGACACGAGGGTCATGGTGACCTGCACAAAGATGTGGAAGAGGACTTCCATGGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 90 bp | CAGCACGAAGAACGGAGCTGCGGAGATCAGCACTGTGGCCCCCAGTaGGTAGGCCCAGAGGGTGACAGTGTCCAGGTGGTGTTTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHEERSCGDQHCGPQ*VGPEGDSVQVVFDA Trigger: GGCATCAAACACCACCTGGACACTGTCACCCTCTGGGCCTACGCACTGGGGGCCACAGTGCTGATCTCCGCAGCTCCGTTCTTCGTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 90 bp | ACTGTCCACTGCCCCTCCCTCGGTGAGAAGGGCACAGGCAGTGCCTaGCAATGCTCCAATTGCAGTCACGAGTTGCAGACGCATCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVHCPSLGEKGTGSA*QCSNCSHELQTHRL Trigger: CAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTCACCGAGGGAGGGGCAGTGGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | CCTGGAGCCCCAGCCTCCCTAGAAGTCCCATGGCTATGTTCACGATaGGCATGTCCATGTCCTCCGTGGTGGAGGCTATCGTGGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGAPASLEVPWLCSR*ACPCPPWWRLSWEW Trigger: CCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGACTTCTAGGGAGGCTGGGGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 90 bp | TCCCTCGGTGAGAAGGGCACAGGCAGTGCCTGCCAATGCTCCAATTaGAGTCACGAGTTGCAGACGCATCGCCTGCTTCTTGCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGEKGTGSACQCSN*SHELQTHRLLLAAA Trigger: GGCTGCAGCAAGAAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTCACCGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS GCA 90 bp | CACTGCCCCTCCCTCGGTGAGAAGGGCACAGGCAGTGCCTGCCAATaGTCCAATTGCAGTCACGAGTTGCAGACGCATCGCCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HCPSLGEKGTGSACQ*SNCSHELQTHRLLL Trigger: AAGAAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTCACCGAGGGAGGGGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | CCTCCGTGGTGGAGGCTATCGTGGGAGTGGCCATGGCTATGGCCATaGTGTAATTCCTCACGTGAGTGTCCATGGTCGTGGCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPWWRLSWEWPWLWP*CNSSRECPWSWLWA Trigger: TGCCCACAGCCACGACCATGGACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS TCA 90 bp | TGTCCATGGTCGTGGCTGTGGGCATGCCCATGCCAGATGCTTTCATaGGTGTGGCCGTGGCCATGGTGGAAATCTTCATGCGAGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPWSWLWACPCQMLS*VWPWPWWKSSCECP Trigger: CGGGCACTCGCATGAAGATTTCCACCATGGCCACGGCCACACTCATGAAAGCATCTGGCATGGGCATGCCCACAGCCACGACCATGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS TCA 90 bp | GCCCTCGGCCCCCACGAAAGGAAGCACCAATGGCCAGACCGTCTGTaGAGTTGTGTGCCAAGTCAGCAGCCAGATTCAGGTACCCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ALGPHERKHQWPDRL*SCVPSQQPDSGTQT Trigger: TGTCTGGGTACCTGAATCTGGCTGCTGACTTGGCACACAACTTCACAGACGGTCTGGCCATTGGTGCTTCCTTTCGTGGGGGCCGAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | CCATGTCCTCCGTGGTGGAGGCTATCGTGGGAGTGGCCATGGCTATaGCCATGGTGTAATTCCTCACGTGAGTGTCCATGGTCGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCPPWWRLSWEWPWL*PWCNSSRECPWSWL Trigger: CAGCCACGACCATGGACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 90 bp | AGGTGGTGTTTGATGCCTGGAGCCCCAGCCTCCCTAGAAGTCCCATaGCTATGTTCACGATGGGCATGTCCATGTCCTCCGTGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWCLMPGAPASLEVP*LCSRWACPCPPWWR Trigger: CCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGACTTCTAGGGAGGCTGGGGCTCCAGGCATCAAACACCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 90 bp | CACGTGAGTGTCCATGGTCGTGGCTGTGGGCATGCCCATGCCAGATaGTTTCATGAGTGTGGCCGTGGCCATGGTGGAAATCTTCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: HVSVHGRGCGHAHAR*FHECGRGHGGNLHA Trigger: CGCATGAAGATTTCCACCATGGCCACGGCCACACTCATGAAAGCATCTGGCATGGGCATGCCCACAGCCACGACCATGGACACTCACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 90 bp | AGAGTTAGATTCTACTGGGATGAGGAACAGCACGAAGAACGGAGCTaGGGAGATCAGCACTGTGGCCCCCAGTGCGTAGGCCCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVRFYWDEEQHEERS*GDQHCGPQCVGPEG Trigger: ACCCTCTGGGCCTACGCACTGGGGGCCACAGTGCTGATCTCCGCAGCTCCGTTCTTCGTGCTGTTCCTCATCCCAGTAGAATCTAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | GCATGTCCATGTCCTCCGTGGTGGAGGCTATCGTGGGAGTGGCCATaGCTATGGCCATGGTGTAATTCCTCACGTGAGTGTCCATGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ACPCPPWWRLSWEWP*LWPWCNSSRECPWS Trigger: CGACCATGGACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 90 bp | GAAGTCCCATGGCTATGTTCACGATGGGCATGTCCATGTCCTCCGTaGTGGAGGCTATCGTGGGAGTGGCCATGGCTATGGCCATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EVPWLCSRWACPCPP*WRLSWEWPWLWPWC Trigger: ACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 90 bp | AATCCCCAACCTCATGAGGCACTTCGTGCAGCAGGACTGTCATTGTaGTCAGGATCCCTAGCCCTCGGCCCCCACGAAAGGAAGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: NPQPHEALRAAGLSL*SGSLALGPHERKHQ Trigger: TTGGTGCTTCCTTTCGTGGGGGCCGAGGGCTAGGGATCCTGACCACAATGACAGTCCTGCTGCACGAAGTGCCTCATGAGGTTGGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | CAGCACAGACACTGTTGCTACGTAGATAAATCCGCCTGCAGTGAATaGCAGGACCCAGCCAGGACCTGCACCACCTGCCACGTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHRHCCYVDKSACSE*QDPARTCTTCHVTV Trigger: GACAGTGACGTGGCAGGTGGTGCAGGTCCTGGCTGGGTCCTGCCATTCACTGCAGGCGGATTTATCTACGTAGCAACAGTGTCTGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS-3UTR CAA 90 bp | TCTTCCCTGAAGCCATCACTAACTAGTTCAGAGGGAGATGGGCCTTGGAGGGACGTGTCCAGGTGGTGTTaGATGCCTGGAGCCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKPSLTSSEGDGPWRDVSRWC*MPGAPA Trigger: GGCTGGGGCTCCAGGCATCAAACACCACCTGGACAC...GTCCCTCCAAGGCCCATCTCCCTCTGAACTAGTTAGTGATGGCTTCAGGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS CCA 90 bp | GTCCCATGGCTATGTTCACGATGGGCATGTCCATGTCCTCCGTGGTaGAGGCTATCGTGGGAGTGGCCATGGCTATGGCCATGGTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPWLCSRWACPCPPW*RLSWEWPWLWPWCN Trigger: ATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 90 bp | CAGGATCTGGAGCAGAGAGCGGTGCCTGGGAGAGTTAGATTCTACTaGGATGAGGAACAGCACGAAGAACGGAGCTGCGGAGATCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QDLEQRAVPGRVRFY*DEEQHEERSCGDQH Trigger: GTGCTGATCTCCGCAGCTCCGTTCTTCGTGCTGTTCCTCATCCCAGTAGAATCTAACTCTCCCAGGCACCGCTCTCTGCTCCAGATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 90 bp | CTGCTTTTTCTTCTTCAGGGCTCTGAGGTTTCACCGGGCCATCTCTaGGCCCAGTGTTTCCTCCTCTCCTTTTCCGCAACCCGCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFLLQGSEVSPGHL*AQCFLLSFSATRPL Trigger: AAGTGGGCGGGTTGCGGAAAAGGAGAGGAGGAAACACTGGGCCCAGAGATGGCCCGGTGAAACCTCAGAGCCCTGAAGAAGAAAAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS-3UTR CAA 90 bp | GTGGGGCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCAAGACCGTCTGTGAAGTaGTGTGCCAAGTCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGPKIQGLLFLVTVPPHPRPSVK*CAKSAA Trigger: GGCTGCTGACTTGGCACACAACTTCACAGACGGTCT...TGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS TCA 90 bp | TGCCCGTGGCTGTGGCCATGGTGGAAATCTTCATGTGAGTGCCCGTaGCTGTGGCCATGGAAGTCCTCTTCCACATCTTTGTGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPWLWPWWKSSCECP*LWPWKSSSTSLCRS Trigger: TGACCTGCACAAAGATGTGGAAGAGGACTTCCATGGCCACAGTCACGGGCACTCACATGAAGATTTCCACCATGGCCACAGCCACGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS TCA 90 bp | TTGCTGCAGCCAGACTGGACCAGGATGGCAAAATCCCCAACCTCATaGGGCACTTCGTGCAGCAGGACTGTCATTGTGGTCAGGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQPDWTRMAKSPTS*GTSCSRTVIVVRIP Trigger: AGGGATCCTGACCACAATGACAGTCCTGCTGCACGAAGTGCCTCATGAGGTTGGGGATTTTGCCATCCTGGTCCAGTCTGGCTGCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS-3UTR CAA 90 bp | CCCATTGATTTTTCCAAAAGCAACAACGCTGCTGGGCAGTCTCCCACTCCGTGGGCAGCAGGACTGTCATaGTGGTCAGGATCCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PIDFSKSNNAAGQSPTPWAAGLS*WSGSLA Trigger: GGCTAGGGATCCTGACCACAATGACAGTCCTGCTGC...CCACGGAGTGGGAGACTGCCCAGCAGCGTTGTTGCTTTTGGAAAAATCAATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS GCA 90 bp | CTCCTCTCCTTTTCCGCAACCCGCCCACTTCCTTCTCTTCCTCTGTaGTGGGCTTTTCCTTTGAAGAACACTCATGTCTATCTCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSFSATRPLPSLPL*WAFPLKNTHVYLHG Trigger: CCCATGGAGATAGACATGAGTGTTCTTCAAAGGAAAAGCCCAGCACAGAGGAAGAGAAGGAAGTGGGCGGGTTGCGGAAAAGGAGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS-3UTR CAA 90 bp | GCCGAAGATCCAAGGTCTTTTATTCCTGGTCACCGTTCCTCCGCACCCATTCAAAATTGCAGTCACGAGTaGCAGACGCATCGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEDPRSFIPGHRSSAPIQNCSHE*QTHRLL Trigger: AAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATT...TTGAATGGGTGCGGAGGAACGGTGACCAGGAATAAAAGACCTTGGATCTTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025186.16 |
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| CDS GCA 72 bp | AGTGAATGGCAGGACCCAGCCAGGACCTGCACCACCTaGCACGTCACTGTCCACTGCCCCTCCCTCGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SEWQDPARTCTT*HVTVHCPSLGE Trigger: CTCACCGAGGGAGGGGCAGTGGACAGTGACGTGGCAGGTGGTGCAGGTCCTGGCTGGGTCCTGCCATTCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS GCA 72 bp | TGCCCCTCCCTCGGTGAGAAGGGCACAGGCAGTGCCTaGCAATGCTCCAATTGCAGTCACGAGTTGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: CPSLGEKGTGSA*QCSNCSHELQT Trigger: CGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTCACCGAGGGAGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 72 bp | CCTCATGAGGCACTTCGTGCAGCAGGACTGTCATTGTaGTCAGGATCCCTAGCCCTCGGCCCCCACGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHEALRAAGLSL*SGSLALGPHER Trigger: CCTTTCGTGGGGGCCGAGGGCTAGGGATCCTGACCACAATGACAGTCCTGCTGCACGAAGTGCCTCATGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 72 bp | TGGAAGTCCTCTTCCACATCTTTGTGCAGGTCACCATaGCCCTCGTGTCCGGCCACCAGCAGCCCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WKSSSTSLCRSP*PSCPATSSPKA Trigger: GGCTTTGGGGCTGCTGGTGGCCGGACACGAGGGTCATGGTGACCTGCACAAAGATGTGGAAGAGGACTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 72 bp | TTCTACTGGGATGAGGAACAGCACGAAGAACGGAGCTaGGGAGATCAGCACTGTGGCCCCCAGTGCGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FYWDEEQHEERS*GDQHCGPQCVG Trigger: GCCTACGCACTGGGGGCCACAGTGCTGATCTCCGCAGCTCCGTTCTTCGTGCTGTTCCTCATCCCAGTAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS GCA 72 bp | TCCCTCGGTGAGAAGGGCACAGGCAGTGCCTGCCAATaGTCCAATTGCAGTCACGAGTTGCAGACGCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGEKGTGSACQ*SNCSHELQTHR Trigger: GCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTCACCGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 72 bp | CCAGAGGGTGACAGTGTCCAGGTGGTGTTTGATGCCTaGAGCCCCAGCCTCCCTAGAAGTCCCATGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: PEGDSVQVVFDA*SPSLPRSPMAM Trigger: CATAGCCATGGGACTTCTAGGGAGGCTGGGGCTCCAGGCATCAAACACCACCTGGACACTGTCACCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CAA 72 bp | CAACCTCATGAGGCACTTCGTGCAGCAGGACTGTCATaGTGGTCAGGATCCCTAGCCCTCGGCCCCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: QPHEALRAAGLS*WSGSLALGPHE Trigger: TTCGTGGGGGCCGAGGGCTAGGGATCCTGACCACAATGACAGTCCTGCTGCACGAAGTGCCTCATGAGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CAA 90 bp | CGGCCCCCACGAAAGGAAGCACCAATGGCCAGACCGTCTGTGAAGTaGTGTGCCAAGTCAGCAGCCAGATTCAGGTACCCAGACACACGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPRKEAPMARPSVK*CAKSAARFRYPDTR Trigger: GCGTGTGTCTGGGTACCTGAATCTGGCTGCTGACTTGGCACACAACTTCACAGACGGTCTGGCCATTGGTGCTTCCTTTCGTGGGGGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 72 bp | GTGCCCGTGGCTGTGGCCATGGTGGAAATCTTCATGTaGGTGCCCGTGACTGTGGCCATGGAAGTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VPVAVAMVEIFM*VPVTVAMEVLF Trigger: GAAGAGGACTTCCATGGCCACAGTCACGGGCACTCACATGAAGATTTCCACCATGGCCACAGCCACGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 72 bp | GTCCATGGTCGTGGCTGTGGGCATGCCCATGCCAGATaGTTTCATGAGTGTGGCCGTGGCCATGGTGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VHGRGCGHAHAR*FHECGRGHGGN Trigger: ATTTCCACCATGGCCACGGCCACACTCATGAAAGCATCTGGCATGGGCATGCCCACAGCCACGACCATGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 72 bp | GCAGTGCCTGCCAATGCTCCAATTGCAGTCACGAGTTaGAGACGCATCGCCTGCTTCTTGCTGCAGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVPANAPIAVTS*RRIACFLLQPD Trigger: GTCTGGCTGCAGCAAGAAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 72 bp | CCGTGGTGGAGGCTATCGTGGGAGTGGCCATGGCTATaGCCATGGTGTAATTCCTCACGTGAGTGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PWWRLSWEWPWL*PWCNSSRECPW Trigger: CCATGGACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | TGGGCATGTCCATGTCCTCCGTGGTGGAGGCTATCGTaGGAGTGGCCATGGCTATGGCCATGGTGTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: WACPCPPWWRLS*EWPWLWPWCNS Trigger: GGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | CTATGTTCACGATGGGCATGTCCATGTCCTCCGTGGTaGAGGCTATCGTGGGAGTGGCCATGGCTATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LCSRWACPCPPW*RLSWEWPWLWP Trigger: TGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | TGGCTATGTTCACGATGGGCATGTCCATGTCCTCCGTaGTGGAGGCTATCGTGGGAGTGGCCATGGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: WLCSRWACPCPP*WRLSWEWPWLW Trigger: CCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | CCAGCCTCCCTAGAAGTCCCATGGCTATGTTCACGATaGGCATGTCCATGTCCTCCGTGGTGGAGGCTATCG | + |
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Preference number: 6 (lower is better) Translates to: PASLEVPWLCSR*ACPCPPWWRLS Trigger: CGATAGCCTCCACCACGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGACTTCTAGGGAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | TTGATGCCTGGAGCCCCAGCCTCCCTAGAAGTCCCATaGCTATGTTCACGATGGGCATGTCCATGTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LMPGAPASLEVP*LCSRWACPCPP Trigger: CGGAGGACATGGACATGCCCATCGTGAACATAGCCATGGGACTTCTAGGGAGGCTGGGGCTCCAGGCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CAA 72 bp | GGCAGTGCCTGCCAATGCTCCAATTGCAGTCACGAGTaGCAGACGCATCGCCTGCTTCTTGCTGCAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GSACQCSNCSHE*QTHRLLLAAAR Trigger: TCTGGCTGCAGCAAGAAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 72 bp | TCGTGGCTGTGGGCATGCCCATGCCAGATGCTTTCATaGGTGTGGCCGTGGCCATGGTGGAAATCTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SWLWACPCQMLS*VWPWPWWKSSC Trigger: GCATGAAGATTTCCACCATGGCCACGGCCACACTCATGAAAGCATCTGGCATGGGCATGCCCACAGCCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS GCA 72 bp | GAGAAGGGCACAGGCAGTGCCTGCCAATGCTCCAATTaGAGTCACGAGTTGCAGACGCATCGCCTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EKGTGSACQCSN*SHELQTHRLLL Trigger: AAGAAGCAGGCGATGCGTCTGCAACTCGTGACTGCAATTGGAGCATTGGCAGGCACTGCCTGTGCCCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 72 bp | TGGAGGCTATCGTGGGAGTGGCCATGGCTATGGCCATaGTGTAATTCCTCACGTGAGTGTCCATGGTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: WRLSWEWPWLWP*CNSSRECPWSW Trigger: CCACGACCATGGACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | TGTCCTCCGTGGTGGAGGCTATCGTGGGAGTGGCCATaGCTATGGCCATGGTGTAATTCCTCACGTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CPPWWRLSWEWP*LWPWCNSSREC Trigger: ACACTCACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS CCA 72 bp | TGTCCATGTCCTCCGTGGTGGAGGCTATCGTGGGAGTaGCCATGGCTATGGCCATGGTGTAATTCCTCACGT | + |
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Preference number: 6 (lower is better) Translates to: CPCPPWWRLSWE*PWLWPWCNSSR Trigger: ACGTGAGGAATTACACCATGGCCATAGCCATGGCCACTCCCACGATAGCCTCCACCACGGAGGACATGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS TCA 72 bp | CCCCACGAAAGGAAGCACCAATGGCCAGACCGTCTGTaGAGTTGTGTGCCAAGTCAGCAGCCAGATTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PHERKHQWPDRL*SCVPSQQPDSG Trigger: ACCTGAATCTGGCTGCTGACTTGGCACACAACTTCACAGACGGTCTGGCCATTGGTGCTTCCTTTCGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 72 bp | CCAGACTGGACCAGGATGGCAAAATCCCCAACCTCATaGGGCACTTCGTGCAGCAGGACTGTCATTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PDWTRMAKSPTS*GTSCSRTVIVV Trigger: GACCACAATGACAGTCCTGCTGCACGAAGTGCCTCATGAGGTTGGGGATTTTGCCATCCTGGTCCAGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CAA 72 bp | CGAAAGGAAGCACCAATGGCCAGACCGTCTGTGAAGTaGTGTGCCAAGTCAGCAGCCAGATTCAGGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: RKEAPMARPSVK*CAKSAARFRYP Trigger: TGGGTACCTGAATCTGGCTGCTGACTTGGCACACAACTTCACAGACGGTCTGGCCATTGGTGCTTCCTTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS TCA 72 bp | CTGTGGCCATGGTGGAAATCTTCATGTGAGTGCCCGTaGCTGTGGCCATGGAAGTCCTCTTCCACATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LWPWWKSSCECP*LWPWKSSSTSL Trigger: CAAAGATGTGGAAGAGGACTTCCATGGCCACAGTCACGGGCACTCACATGAAGATTTCCACCATGGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 ENSMUST00000171872.3 |
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| CDS TCA 72 bp | TCCTTTGAAGAACACTCATGTCTATCTCCATGGGTGTaGCTGTCTCCATGCGCATGCCTGTCTCCGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFEEHSCLSPWV*LSPCACLSPCP Trigger: CGGACACGGAGACAGGCATGCGCATGGAGACAGTCACACCCATGGAGATAGACATGAGTGTTCTTCAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS GCA 72 bp | GAAGCAAAACTGAGCAGGATCTGGAGCAGAGAGCGGTaGCTGGGAGAGTTAGATTCTACTGGGATGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: EAKLSRIWSRER*LGELDSTGMRN Trigger: GTTCCTCATCCCAGTAGAATCTAACTCTCCCAGGCACCGCTCTCTGCTCCAGATCCTGCTCAGTTTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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| CDS CCA 72 bp | TCCGCAACCCGCCCACTTCCTTCTCTTCCTCTGTGCTaGGCTTTTCCTTTGAAGAACACTCATGTCTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SATRPLPSLPLC*AFPLKNTHVYL Trigger: GAGATAGACATGAGTGTTCTTCAAAGGAAAAGCCCAGCACAGAGGAAGAGAAGGAAGTGGGCGGGTTGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025186.16 ENSMUST00000169397.9 |
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