Pregenerated sensors for SLC39A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024270Ensembl transcript IDs: ENSMUST00000070726.10, ENSMUST00000154205.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTTaGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VLFSSYFLTMLSVNC*CLGFCAHSFSARAR Trigger: CCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CCA 90 bp | ATTTTCTCTAGAATAGACAAGACACGGCATGCCGAAACATACAGCTaGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: IFSRIDKTRHAETYS*VILVDHTQNLHFQN Trigger: GTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTGTATGTTTCGGCATGCCGTGTCTTGTCTATTCTAGAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CCA 90 bp | GGTCTTAACATCCTCTCATGGGCTAAAGTTTTAATACTTGCCACTTaGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGCATAAG | + |
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Preference number: 1 (lower is better) Translates to: GLNILSWAKVLILAT*KPRQLECSHNFRHK Trigger: CTTATGCCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAAAACTTTAGCCCATGAGAGGATGTTAAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR TCA 90 bp | GTCATACATCAAAGGACAGTTGTTCACAATGACATTTTAAAGCACTaGGAGAGAAAGAGAGCTAAGTGCTTTTTGAATCCAAGAAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: VIHQRTVVHNDILKH*ERKRAKCFLNPRSQ Trigger: TTGACTTCTTGGATTCAAAAAGCACTTAGCTCTCTTTCTCTCTCAGTGCTTTAAAATGTCATTGTGAACAACTGTCCTTTGATGTATGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CAA 90 bp | CTATTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTTGGGTTTaGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LFPDYAQCELLVSWV*CPFFLSTSKGPTPA Trigger: TGCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCTGGTGACACACTAGTTACTCATTTGGCCCATCTCCACACACAGATTAGACAAGACACGGCATaGCGAAACATACAGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: KSSGDTLVTHLAHLHTQIRQDTA*RNIQLG Trigger: ACCCAGCTGTATGTTTCGGCATGCCGTGTCTTGTCT...AATCTGTGTGTGGAGATGGGCCAAATGAGTAACTAGTGTGTCACCAGAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACATTTCTACCATCTACTaGAACTACAAACAACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: VGVLGFVPILSQHEQGPNISTIY*NYKQQY Trigger: GTACTGTTGTTTGTAGTTCCAGTAGATGGTAGAAAT...GTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR-3UTR GCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATCTCACTAGTTTTAAATaGTGTGTATCACAGCATATG | + |
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Preference number: 2 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHLTSFK*CVSQHM Trigger: CATATGCTGTGATACACAGCATTTAAAACTAGTGAG...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAACAGGTCTTAACATCCTCTCATGGGCTAAAGTTTTAATACTTGCCACTAGATGTACAAGCAGATaGAGTGTATCAGAGTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: FRTGLNILSWAKVLILATRCTSR*SVSECS Trigger: TGAACACTCTGATACACTTCATCTGCTTGTACATCT...AGTGGCAAGTATTAAAACTTTAGCCCATGAGAGGATGTTAAGACCTGTTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR TCA 72 bp | GGCATAAGAGACCATGGTGAAAACCAAGTCTTCTGGTaGCACACTAGTTACTCATTTGGCCCATCTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: GIRDHGENQVFW*HTSYSFGPSPH Trigger: GTGTGGAGATGGGCCAAATGAGTAACTAGTGTGTCACCAGAAGACTTGGTTTTCACCATGGTCTCTTATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CCA 72 bp | TTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTTaGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: FPDYAQCELLVS*VLCPFFLSTSK Trigger: CTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAACAGTTCACACTGAGCATAGTCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR-3UTR CAA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATACACTAGTTACTCATTaGGCCCATCTCCACACACAG | + |
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Preference number: 3 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHTLVTH*AHLHTQ Trigger: CTGTGTGTGGAGATGGGCCAAATGAGTAACTAGTGT...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR GCA 72 bp | TTACTCATTTGGCCCATCTCCACACACAGATTTAAATaGCTCATTTCTCAGCCAAGTGACACATTGCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LLIWPISTHRFK*LISQPSDTLLG Trigger: TCCAAGCAATGTGTCACTTGGCTGAGAAATGAGGCATTTAAATCTGTGTGTGGAGATGGGCCAAATGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CCA 72 bp | ATCCTCTCATGGGCTAAAGTTTTAATACTTGCCACTTaGAAGCCTAGACAACTAGAATGTTCACATAACTTC | + |
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Preference number: 3 (lower is better) Translates to: ILSWAKVLILAT*KPRQLECSHNF Trigger: GAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAAAACTTTAGCCCATGAGAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR TCA 72 bp | CAAAGGACAGTTGTTCACAATGACATTTTAAAGCACTaGGAGAGAAAGAGAGCTAAGTGCTTTTTGAATCCA | + |
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Preference number: 3 (lower is better) Translates to: QRTVVHNDILKH*ERKRAKCFLNP Trigger: TGGATTCAAAAAGCACTTAGCTCTCTTTCTCTCTCAGTGCTTTAAAATGTCATTGTGAACAACTGTCCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGGCAGCCCGTCGCCCATaGTCACCATCCAGGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVAARRP*SPSRPM Trigger: CATTGGCCTGGATGGTGATCATGGGCGACGGGCTGC...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCAGAGCACAGCCTGCTTaGCAGTCATGCCAGCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VLGFVPILSQHEQGPNSSRAQPA*QSCQPL Trigger: TAAAGGCTGGCATGACTGTCAAGCAGGCTGTGCTCT...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCCTCCTACCATTCATGTaGTCTGCTGGGCGAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: VLGFVPILSQHEQGPNSSLLPFM*SAGRDP Trigger: AGGATCTCGCCCAGCAGAGCACATGAATGGTAGGAG...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GTTGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACGAGCCTGGATGCTCATaGCATGGGATGTCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VGVLGFVPILSQHEQGPNEPGCS*HGMSAA Trigger: AGCTGCTGACATCCCATGGCATGAGCATCCAGGCTC...GTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCGACTTCTTGTGGGTGTaGATGGGCTATCATGACCTC | + |
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Preference number: 4 (lower is better) Translates to: VLGFVPILSQHEQGPNSSDFLWV*MGYHDL Trigger: GAGGTCATGATAGCCCATGCACACCCACAAGAAGTC...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACATCGTCGGCTGCTaGGAATCAAAGGGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVNIVGC*ESKGEG Trigger: GCCCTCCCCCTTTGATTCCCAGCAGCCGACGATGTT...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | GTTGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACAGCTTGCACTCTCCTTaGTGTTCCTCCTACCATTCA | + |
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Preference number: 4 (lower is better) Translates to: VGVLGFVPILSQHEQGPNSLHSP*CSSYHS Trigger: TGAATGGTAGGAGGAACATCAAGGAGAGTGCAAGCT...GTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CAA 72 bp | GACTATGCTCAGTGTGAACTGTTGGTGTCTTGGGTTTaGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DYAQCELLVSWV*CPFFLSTSKGP Trigger: TGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAACAGTTCACACTGAGCATAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGTACCCGGTTCATGAGTaGCACCAAGATGACTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVYPVHE*HQDDSQ Trigger: CTGGGAGTCATCTTGGTGCCACTCATGAACCGGGTA...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATTGCTCGTGGTCAGCATaGTGCTCGTGGTCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHCSWSA*CSWSWC Trigger: ACACCATGACCACGAGCATCATGCTGACCACGAGCA...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CCCAACTCCAGCAGGGAAGTAATGCTAAAGCTACACAGAAGAGCACTAAAGACACTCCGTGATGCTGGGTaGGGTAGAAGGGTTTACATC | + |
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Preference number: 4 (lower is better) Translates to: PNSSREVMLKLHRRALKTLRDAG*GRRVYI Trigger: GATGTAAACCCTTCTACCCCACCCAGCATCACGGAG...TGTCTTTAGTGCTCTTCTGTGTAGCTTTAGCATTACTTCCCTGCTGGAGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | TTCAGAACAGGTCTTAACATCCTCTCATGGGCTAAAGTTTTAATACTTGCCACTGAGCCGACAGGTGGCTaGACAGGGGGCCTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FRTGLNILSWAKVLILATEPTGG*TGGLFS Trigger: TGAAAAGAGGCCCCCTGTTCAGCCACCTGTCGGCTC...AGTGGCAAGTATTAAAACTTTAGCCCATGAGAGGATGTTAAGACCTGTTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | CCCAACTCCAGCAGGGAAGTAATGCTAAAGCTACACAGAAGAGCACTAAAGACAGTGCATGGGCTATCATaGCCTCTTCCTCTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: PNSSREVMLKLHRRALKTVHGLS*PLPLPT Trigger: TGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCAC...TGTCTTTAGTGCTCTTCTGTGTAGCTTTAGCATTACTTCCCTGCTGGAGTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGCTGCATAATGCCCGATaGATATCCCTGTTGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVLHNAR*ISLLPF Trigger: GAATGGCAACAGGGATATTCATCGGGCATTATGCAG...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGCAAGCCGGCAGTGAGTaGGAATATCCACATAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVQAGSE*EYPHRN Trigger: GTTTCTATGTGGATATTCGCACTCACTGCCGGCTTG...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGGATGAATATCCCTGTTaGCATTCCAAGGTAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVDEYPC*HSKVGQ Trigger: TTGGCCTACCTTGGAATGGCAACAGGGATATTCATC...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTTCTGGTGACACACTAGTTACTCATTTGGCCCATCTCCACACACAGATTTCGTGGAAGTGTGAATaGCACTTGTTCTTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KSSGDTLVTHLAHLHTQISWKCE*HLFLQP Trigger: GGGCTGCAAGAACAAGTGCCATTCACACTTCCACGA...AATCTGTGTGTGGAGATGGGCCAAATGAGTAACTAGTGTGTCACCAGAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | TTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGATGAGGTCGTCGGACTaGCCCAGCGTATCGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LILATWKPRQLECSHNFRMRSSD*PSVSWK Trigger: CTTCCACGATACGCTGGGCCAGTCCGACGACCTCAT...CCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTTCTGGTGACACACTAGTTACTCATTTGGCCCATCTCCACACACAGATTTCGTATTTGGACAGCTaGTTCTTGCTCTCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: KSSGDTLVTHLAHLHTQISYLDS*FLLSTS Trigger: GGATGTGGAGAGCAAGAAGCAGCTGTCCAAATACGA...AATCTGTGTGTGGAGATGGGCCAAATGAGTAACTAGTGTGTCACCAGAAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATGCGTCTCCCAGGTTTTaGAGTCTCTATTGTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHASPRF*SLYCLY Trigger: GTAGAGACAATAGAGACTCCAAAACCTGGGAGACGC...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CCCAACTCCAGCAGGGAAGTAATGCTAAAGCTACACAGAAGAGCACTAAAGACATGTTCTTGCAGCCCCTaGGCACATATTCATTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PNSSREVMLKLHRRALKTCSCSP*AHIHCR Trigger: TCTACAATGAATATGTGCCCAGGGGCTGCAAGAACA...TGTCTTTAGTGCTCTTCTGTGTAGCTTTAGCATTACTTCCCTGCTGGAGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| 3UTR CAA 72 bp | TTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTaGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLLFPDYAQCEL*VSWVLCPFFLS Trigger: GCTGAGAAAGAATGGGCACAAAACCCAAGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGATTTTCTCAGTAGTCTaGGAGAAAGCAGCTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVIFSVV*EKAAVD Trigger: ATCAACAGCTGCTTTCTCTCAGACTACTGAGAAAAT...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | CCTCAATCCTCCCGAGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGGCAGCTTGGTTGTATTaGAACACTCCTGAATATTGT | + |
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Preference number: 4 (lower is better) Translates to: PQSSRVLFSSYFLTMLSVAAWLY*NTPEYC Trigger: ACAATATTCAGGAGTGTTTCAATACAACCAAGCTGC...CACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACTCGGGAGGATTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | AGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTCGTATCGTGGAAGTGTaGATGGCACTTGTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SSLFLLFPDYAQCELLVSRIVEV*MALVLA Trigger: TGCAAGAACAAGTGCCATTCACACTTCCACGATACG...AGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATTCGCTGCATGGTAACTaGCAAGTCAACATTAACACC | + |
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Preference number: 4 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHSLHGN*QVNINT Trigger: GGTGTTAATGTTGACTTGGCAGTTACCATGCAGCGA...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | AGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTTGGACAGCTGCTTCTTaGTCTCCACATCCTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: SSLFLLFPDYAQCELLVSWTAAS*SPHPHH Trigger: ATGATGAGGATGTGGAGAGCAAGAAGCAGCTGTCCA...AGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATTCACTAGCATCATTGTaGAACATCTCAGGCACCATG | + |
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Preference number: 4 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHSLASL*NISGTM Trigger: CATGGTGCCTGAGATGTTGCACAATGATGCTAGTGA...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | AGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTGCTGAGAGTCGTATTTaGACAGCTGCTTCTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLFLLFPDYAQCELLVSAESRI*TAASCS Trigger: AGAGCAAGAAGCAGCTGTCCAAATACGACTCTCAGC...AGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | TTTCTACCATCTACTGGAACTACAAACAACAGTACTTCTTTAAGCTGCTCTAGGTGGCCCAGCGTATCGTaGAAGTGTGAATGGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: FLPSTGTTNNSTSLSCSRWPSVS*KCEWHL Trigger: CAAGTGCCATTCACACTTCCACGATACGCTGGGCCA...CCTAGAGCAGCTTAAAGAAGTACTGTTGTTTGTAGTTCCAGTAGATGGTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | GTTTTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCCAACGGCTGCATCCGTaGTCACTAGCATCATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VLILATWKPRQLECSHNFQRLHP*SLASLC Trigger: GCACAATGATGCTAGTGATCACGGATGCAGCCGTTG...GAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATAGTATCCCAGCATTCTaGAGGAAGAAATATCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHSIPAF*RKKYPQ Trigger: TTGGGGATATTTCTTCCTGCAGAATGCTGGGATACT...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATTTCAGGTCGTTCCCCTaGGTCCACCTTCTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNFRSFP*VHLLFI Trigger: AATGAAGAGAAGGTGGACCCAGGGGAACGACCTGAA...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATTCTTGTGGGTGTGCATaGGCTATCATGACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNSCGCA*AIMTSS Trigger: GGAAGAGGTCATGATAGCCCATGCACACCCACAAGA...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR TCA 90 bp | CCCAACTCCAGCAGGGAAGTAATGCTAAAGCTACACAGAAGAGCACTAAAGACACAAAGGTCAAGATCATaGTTACAGATAAATCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSSREVMLKLHRRALKTQRSRS*LQINLW Trigger: CCACAGATTTATCTGTAATCATGATCTTGACCTTTG...TGTCTTTAGTGCTCTTCTGTGTAGCTTTAGCATTACTTCCCTGCTGGAGTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | AAACGTACCTTTATGTTACCCAATGGAACTGACTTTATAAGCATAACAAATGGCGCCCGAGCATCAATTTaGTTGATGATGGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTFMLPNGTDFISITNGARASI*LMMAGQ Trigger: CTGCCCAGCCATCATCAATCAAATTGATGCTCGGGC...GCCATTTGTTATGCTTATAAAGTCAGTTCCATTGGGTAACATAAAGGTACGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | TTTCTACCATCTACTGGAACTACAAACAACAGTACTTCTTTAAGCTGCTCTAGGTTCTCACTTGCTGTATaGATCAGACAAGCCCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSTGTTNNSTSLSCSRFSLAV*IRQARA Trigger: TGCTCGGGCTTGTCTGATTCATACAGCAAGTGAGAA...CCTAGAGCAGCTTAAAGAAGTACTGTTGTTTGTAGTTCCAGTAGATGGTAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | TTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGACTGTGCTGATGACTTaGATGAGAGTGTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LILATWKPRQLECSHNFRTVLMT*MRVWEK Trigger: CTTCTCCCACACTCTCATGCAAGTCATCAGCACAGT...CCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | TTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGAATGGCACTTGTTCTTaGAGCCCCTGGGCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: LILATWKPRQLECSHNFRNGTCS*SPWAHI Trigger: AATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATT...CCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | TTCAGAACAGGTCTTAACATCCTCTCATGGGCTAAAGTTTTAATACTTGCCACTCACCTTCTCTTCATTTaGGGAAAGCTGAGAGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRTGLNILSWAKVLILATHLLFI*GKLRVV Trigger: TACGACTCTCAGCTTTCCTCAAATGAAGAGAAGGTG...AGTGGCAAGTATTAAAACTTTAGCCCATGAGAGGATGTTAAGACCTGTTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR GCA 90 bp | AAACGTACCTTTATGTTACCCAATGGAACTGACTTTATAAGCATAACAAATGGCTCAACAGAGCCTGGATaGTCATGCCATGGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRTFMLPNGTDFISITNGSTEPG*SCHGMS Trigger: TGACATCCCATGGCATGAGCATCCAGGCTCTGTTGA...GCCATTTGTTATGCTTATAAAGTCAGTTCCATTGGGTAACATAAAGGTACGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTACCATCTACTGGAACTACAAACAACAGTACTTCTTTAAGCTGCTCTAGGCAAGGTAGGCCAACATaGCTGACAGAGCATTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSTGTTNNSTSLSCSRQGRPT*LTEHYR Trigger: TCTATAATGCTCTGTCAGCCATGTTGGCCTACCTTG...CCTAGAGCAGCTTAAAGAAGTACTGTTGTTTGTAGTTCCAGTAGATGGTAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR TCA 90 bp | TTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGTCTAGGATTTTTACCTaGATTATCAGAGTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LILATWKPRQLECSHNFRSRIFT*IIRVKV Trigger: GACCTTGACTCTGATAATTCAGGTAAAAATCCTAGA...CCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATTTGATTGATGATGGCTaGGCAGAGATAGTTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNLIDDG*AEIVKF Trigger: GAATTTAACTATCTCTGCCCAGCCATCATCAATCAA...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | GTTTTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCTCAGACCTTTCCACGTaGAATCAAAATAGGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLILATWKPRQLECSHNFSDLST*NQNRSF Trigger: AAAGCTCCTATTTTGATTCCACGTGGAAAGGTCTGA...GAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CCA 90 bp | AAACGTACCTTTATGTTACCCAATGGAACTGACTTTATAAGCATAACAAATGGCATTGTAGACTTCTTGTaGGTGTGCATGGGCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTFMLPNGTDFISITNGIVDFL*VCMGYH Trigger: ATGATAGCCCATGCACACCCACAAGAAGTCTACAAT...GCCATTTGTTATGCTTATAAAGTCAGTTCCATTGGGTAACATAAAGGTACGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS GCA 90 bp | TGTGCATGGGCTATCATGACCTCTTCCTCTTCCAACATCGTCGGCTaGTGGGAATCAAAGGGGGAGGGCTCTTGGGAGTCGGCTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAWAIMTSSSSNIVG*WESKGEGSWESARR Trigger: TCTGCGAGCCGACTCCCAAGAGCCCTCCCCCTTTGATTCCCAGCAGCCGACGATGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCAGGCCGTCACTGAAATaGTGCAGCCCGTCGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VLGFVPILSQHEQGPNSSRPSLK*CSPSPM Trigger: CATGGGCGACGGGCTGCACAATTTCAGTGACGGCCT...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS TCA 90 bp | GTGGTGGATGAGGTCGTCGGACTGGCCCAGCGTATCGTGGAAGTGTaGATGGCACTTGTTCTTGCAGCCCCTGGGCACATATTCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VVDEVVGLAQRIVEV*MALVLAAPGHIFIV Trigger: TACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGGGCCAGTCCGACGACCTCATCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 90 bp | CGGACTGGCCCAGCGTATCGTGGAAGTGTGAATGGCACTTGTTCTTaGAGCCCCTGGGCACATATTCATTGTAGACTTCTTGTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTGPAYRGSVNGTCS*SPWAHIHCRLLVGV Trigger: CACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGGGCCAGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 90 bp | AGCCGACAGGTGGCTGAACAGGGGGCCTCTTTTCATTTCCATCGCTaGCTCTTCATGGCTATGACTGTGCTGATGACTTGCATGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRQVAEQGASFHFHR*LFMAMTVLMTCMRV Trigger: CACTCTCATGCAAGTCATCAGCACAGTCATAGCCATGAAGAGCCAGCGATGGAAATGAAAAGAGGCCCCCTGTTCAGCCACCTGTCGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCGAGCTTGCACTCTCCTaGATGTTCCTCCTACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGFVPILSQHEQGPNSSELALS*MFLLPF Trigger: GAATGGTAGGAGGAACATCAAGGAGAGTGCAAGCTC...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS TCA 90 bp | CCCGATGAATATCCCTGTTGCCATTCCAAGGTAGGCCAACATGGCTaGCAGAGCATTATAGAGCACAGCCTGCTTGACAGTCATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDEYPCCHSKVGQHG*QSIIEHSLLDSHAS Trigger: GCTGGCATGACTGTCAAGCAGGCTGTGCTCTATAATGCTCTGTCAGCCATGTTGGCCTACCTTGGAATGGCAACAGGGATATTCATCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 90 bp | CTTGCAGCCCCTGGGCACATATTCATTGTAGACTTCTTGTGGGTGTaGATGGGCTATCATGACCTCTTCCTCTTCCAACATCGTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAAPGHIFIVDFLWV*MGYHDLFLFQHRRL Trigger: CAGCCGACGATGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS-3UTR CAA 90 bp | GTTGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACGACTGTGCTGATGACTaGCATGAGAGTGTGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VGVLGFVPILSQHEQGPNDCADD*HESVGE Trigger: TTCTCCCACACTCTCATGCAAGTCATCAGCACAGTC...GTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS TCA 90 bp | TCAGGTCGTTCCCCTGGGTCCACCTTCTCTTCATTTGAGGAAAGCTaGGAGTCGTATTTGGACAGCTGCTTCTTGCTCTCCACATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGRSPGSTFSSFEES*ESYLDSCFLLSTSS Trigger: TGAGGATGTGGAGAGCAAGAAGCAGCTGTCCAAATACGACTCTCAGCTTTCCTCAAATGAAGAGAAGGTGGACCCAGGGGAACGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 90 bp | TTCAGAGACAGCGTTGTATACCGCCGAGGTCACTTCACTAGAGCTTaGACTCTCCTTGATGTTCCTCCTACCATTCATGTGCTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRDSVVYRRGHFTRA*TLLDVPPTIHVLCW Trigger: CCAGCAGAGCACATGAATGGTAGGAGGAACATCAAGGAGAGTGCAAGCTCTAGTGAAGTGACCTCGGCGGTATACAACGCTGTCTCTGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 90 bp | CCAGCGTATCGTGGAAGTGTGAATGGCACTTGTTCTTGCAGCCCCTaGGCACATATTCATTGTAGACTTCTTGTGGGTGTGCATGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PAYRGSVNGTCSCSP*AHIHCRLLVGVHGL Trigger: TAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS-3UTR CAA 90 bp | GTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCAGGGAAGTCACTCACAGACTCATaGCTTTTCTTCCTAGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLCPFFLSTSKGPTPAGKSLTDS*LFFLAS Trigger: GCTAGCTAGGAAGAAAAGCAATGAGTCTGTGAGTGA...CTTCCCTGCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CAA 90 bp | GTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACTCCAGCCTGCCTTCTTCTCACTaGCTGTATGAATCAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGFVPILSQHEQGPNSSLPSSH*LYESDK Trigger: CTTGTCTGATTCATACAGCAAGTGAGAAGAAGGCAG...GCTGGAGTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CAA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATAAAGGGGGAGGGCTCTaGGGAGTCGGCTCGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHKGGGL*GVGSQI Trigger: TATCTGCGAGCCGACTCCCAAGAGCCCTCCCCCTTT...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 90 bp | GGGTGGGGTAGAAGGGTTTACATCTTTGGTGCGTCTCCCAGGTTTTaGAGTCTCTATTGTCTCTACAAAGCGAGTTCCTTCAGAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWGRRVYIFGASPRF*SLYCLYKASSFRDS Trigger: GCTGTCTCTGAAGGAACTCGCTTTGTAGAGACAATAGAGACTCCAAAACCTGGGAGACGCACCAAAGATGTAAACCCTTCTACCCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 90 bp | CACGAGGAAGCTCAGCAGGAACTTGAAAAATACCCGGTTCATGAGTaGCACCAAGATGACTCCCAGCAGAGACAGGAAACTGATGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: HEEAQQELEKYPVHE*HQDDSQQRQETDDG Trigger: TCCATCATCAGTTTCCTGTCTCTGCTGGGAGTCATCTTGGTGCCACTCATGAACCGGGTATTTTTCAAGTTCCTGCTGAGCTTCCTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS TCA 90 bp | GCACATATTCATTGTAGACTTCTTGTGGGTGTGCATGGGCTATCATaGCCTCTTCCTCTTCCAACATCGTCGGCTGCTGGGAATCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHIHCRLLVGVHGLS*PLPLPTSSAAGNQR Trigger: CCTTTGATTCCCAGCAGCCGACGATGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 90 bp | CTTGTTCTTGCAGCCCCTGGGCACATATTCATTGTAGACTTCTTGTaGGTGTGCATGGGCTATCATGACCTCTTCCTCTTCCAACATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLAAPGHIFIVDFL*VCMGYHDLFLFQHR Trigger: ACGATGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATCCTTCAGAGACAGCGTaGTATACCGCCGAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHPSETA*YTAEVT Trigger: AGTGACCTCGGCGGTATACAACGCTGTCTCTGAAGG...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CAA 90 bp | GTTGGTGTCTTGGGTTTTGTGCCCATTCTTTCTCAGCACGAGCAAGGGCCCAACGTAAAGAATAGGTCTTaGGAGGGATTTCTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGVLGFVPILSQHEQGPNVKNRS*EGFLPS Trigger: AGAAGGCAGAAATCCCTCCAAAGACCTATTCTTTAC...GTTGGGCCCTTGCTCGTGCTGAGAAAGAATGGGCACAAAACCCAAGACACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CAA 90 bp | GAAAGAAACATCCAGACAGTGCTACAGACAGCCCCAATGTATCTACAGTGTCATGAATGGCACTTGTTCTaGCAGCCCCTGGGCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: ERNIQTVLQTAPMYLQCHEWHLF*QPLGTY Trigger: ATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTC...ATGACACTGTAGATACATTGGGGCTGTCTGTAGCACTGTCTGGATGTTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS GCA 90 bp | GAACAAGCCGGCAGTGAGTGCGAATATCCACATAGAAACATTTTCTaGATAATGCCCGATGAATATCCCTGTTGCCATTCCAAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EQAGSECEYPHRNIF*IMPDEYPCCHSKVG Trigger: GCCTACCTTGGAATGGCAACAGGGATATTCATCGGGCATTATGCAGAAAATGTTTCTATGTGGATATTCGCACTCACTGCCGGCTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 90 bp | ATCAATTTGATTGATGATGGCTGGGCAGAGATAGTTAAATTCCGTTaGATTCAACAGAGCCTGGATGCTCATGCCATGGGATGTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: INLIDDGWAEIVKFR*IQQSLDAHAMGCQQ Trigger: CTGCTGACATCCCATGGCATGAGCATCCAGGCTCTGTTGAATGCAACGGAATTTAACTATCTCTGCCCAGCCATCATCAATCAAATTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATAAGTGTGAATGGCACTaGTTCTTGCAGCCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNKCEWH*FLQPLG Trigger: GCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTT...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CAA 90 bp | AGTTCTCTTTTCCTCCTATTTCCTGACTATGCTCAGTGTGAACTGTTGGTGTCTCCACCTTCTCTTCATTaGAGGAAAGCTGAGAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLFLLFPDYAQCELLVSPPSLH*RKAESR Trigger: ACGACTCTCAGCTTTCCTCAAATGAAGAGAAGGTGG...AGACACCAACAGTTCACACTGAGCATAGTCAGGAAATAGGAGGAAAAGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTCTGGTGACACACTAGTTACTCATTTGGCCCATCTCCACACACAGATTTTCATTGTAGACTTCTaGTGGGTGTGCATGGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KSSGDTLVTHLAHLHTQIFIVDF*WVCMGY Trigger: ATAGCCCATGCACACCCACAAGAAGTCTACAATGAA...AATCTGTGTGTGGAGATGGGCCAAATGAGTAACTAGTGTGTCACCAGAAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS CCA 90 bp | TGTATGAATCAGACAAGCCCGAGCATCAATTTGATTGATGATGGCTaGGCAGAGATAGTTAAATTCCGTTGCATTCAACAGAGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CMNQTSPSINLIDDG*AEIVKFRCIQQSLD Trigger: ATCCAGGCTCTGTTGAATGCAACGGAATTTAACTATCTCTGCCCAGCCATCATCAATCAAATTGATGCTCGGGCTTGTCTGATTCATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATAGCCCGAGCATCAATTaGATTGATGATGGCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNSPSIN*IDDGWA Trigger: TGCCCAGCCATCATCAATCAAATTGATGCTCGGGCT...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CAA 90 bp | TTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCAGGTGGGATGTCAGCAGCTaGGTTGTATTGAAACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LILATWKPRQLECSHNFRWDVSS*VVLKHS Trigger: GGAGTGTTTCAATACAACCAAGCTGCTGACATCCCA...CCTGAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTAATACTTGCCACTTGGAAGCCTAGACAACTAGAATGTTCACATAACTTCTTGGACAGCTGCTTCTaGCTCTCCACATCCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: VLILATWKPRQLECSHNFLDSCF*LSTSSS Trigger: TGATGAGGATGTGGAGAGCAAGAAGCAGCTGTCCAA...GAAGTTATGTGAACATTCTAGTTGTCTAGGCTTCCAAGTGGCAAGTATTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS-3UTR CAA 90 bp | CAGCTGGGTAATACTGGTGGATCACACACAGAATTTACATTTCCAAAACAGAATGTTTTGGAGTCTCTATaGTCTCTACAAAGCGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: QLGNTGGSHTEFTFPKQNVLESL*SLQSEF Trigger: GAACTCGCTTTGTAGAGACAATAGAGACTCCAAAAC...ATTCTGTTTTGGAAATGTAAATTCTGTGTGTGATCCACCAGTATTACCCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CAA 90 bp | CTCTTCCAACATCGTCGGCTGCTGGGAATCAAAGGGGGAGGGCTCTaGGGAGTCGGCTCGCAGATAGCTTTCAGGTCGTTCCCCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LFQHRRLLGIKGGGL*GVGSQIAFRSFPWV Trigger: GACCCAGGGGAACGACCTGAAAGCTATCTGCGAGCCGACTCCCAAGAGCCCTCCCCCTTTGATTCCCAGCAGCCGACGATGTTGGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | CAGCCGGCCCACTCGGCTTTTCTCCGTGATGCTGGGTaGGGTAGAAGGGTTTACATCTTTGGTGCGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: QPAHSAFLRDAG*GRRVYIFGASP Trigger: GGGAGACGCACCAAAGATGTAAACCCTTCTACCCCACCCAGCATCACGGAGAAAAGCCGAGTGGGCCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CAA 72 bp | CATCGTCGGCTGCTGGGAATCAAAGGGGGAGGGCTCTaGGGAGTCGGCTCGCAGATAGCTTTCAGGTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: HRRLLGIKGGGL*GVGSQIAFRSF Trigger: GAACGACCTGAAAGCTATCTGCGAGCCGACTCCCAAGAGCCCTCCCCCTTTGATTCCCAGCAGCCGACGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 90 bp | CTCAGCGTTCCGACGGCCAGCGCCACGAGGAAGCTCAGCAGGAACTaGAAAAATACCCGGTTCATGAGTGGCACCAAGATGACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSVPTASATRKLSRN*KNTRFMSGTKMTPS Trigger: GCTGGGAGTCATCTTGGTGCCACTCATGAACCGGGTATTTTTCAAGTTCCTGCTGAGCTTCCTCGTGGCGCTGGCCGTCGGAACGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS TCA 72 bp | GAGGTCGTCGGACTGGCCCAGCGTATCGTGGAAGTGTaGATGGCACTTGTTCTTGCAGCCCCTGGGCACATA | + |
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Preference number: 6 (lower is better) Translates to: EVVGLAQRIVEV*MALVLAAPGHI Trigger: TATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGGGCCAGTCCGACGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | TGGTGGATGAGGTCGTCGGACTGGCCCAGCGTATCGTaGAAGTGTGAATGGCACTTGTTCTTGCAGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: WWMRSSDWPSVS*KCEWHLFLQPL Trigger: CAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGGGCCAGTCCGACGACCTCATCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 72 bp | GCTATCATGACCTCTTCCTCTTCCAACATCGTCGGCTaGTGGGAATCAAAGGGGGAGGGCTCTTGGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: AIMTSSSSNIVG*WESKGEGSWES Trigger: CGACTCCCAAGAGCCCTCCCCCTTTGATTCCCAGCAGCCGACGATGTTGGAAGAGGAAGAGGTCATGATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | ATCATGACCTCTTCCTCTTCCAACATCGTCGGCTGCTaGGAATCAAAGGGGGAGGGCTCTTGGGAGTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: IMTSSSSNIVGC*ESKGEGSWESA Trigger: AGCCGACTCCCAAGAGCCCTCCCCCTTTGATTCCCAGCAGCCGACGATGTTGGAAGAGGAAGAGGTCATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | TCGTCGGACTGGCCCAGCGTATCGTGGAAGTGTGAATaGCACTTGTTCTTGCAGCCCCTGGGCACATATTCA | + |
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Preference number: 6 (lower is better) Translates to: SSDWPSVSWKCE*HLFLQPLGTYS Trigger: TGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGGGCCAGTCCGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 90 bp | GCGTTGTATACCGCCGAGGTCACTTCACTAGAGCTTGCACTCTCCTaGATGTTCCTCCTACCATTCATGTGCTCTGCTGGGCGAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: ALYTAEVTSLELALS*MFLLPFMCSAGRDP Trigger: AGGATCTCGCCCAGCAGAGCACATGAATGGTAGGAGGAACATCAAGGAGAGTGCAAGCTCTAGTGAAGTGACCTCGGCGGTATACAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 72 bp | GTGGCTGAACAGGGGGCCTCTTTTCATTTCCATCGCTaGCTCTTCATGGCTATGACTGTGCTGATGACTTGC | + |
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Preference number: 6 (lower is better) Translates to: VAEQGASFHFHR*LFMAMTVLMTC Trigger: GCAAGTCATCAGCACAGTCATAGCCATGAAGAGCCAGCGATGGAAATGAAAAGAGGCCCCCTGTTCAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS TCA 72 bp | TCCCCTGGGTCCACCTTCTCTTCATTTGAGGAAAGCTaGGAGTCGTATTTGGACAGCTGCTTCTTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPGSTFSSFEES*ESYLDSCFLLS Trigger: GGAGAGCAAGAAGCAGCTGTCCAAATACGACTCTCAGCTTTCCTCAAATGAAGAGAAGGTGGACCCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | GCAGCCCCTGGGCACATATTCATTGTAGACTTCTTGTaGGTGTGCATGGGCTATCATGACCTCTTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AAPGHIFIVDFL*VCMGYHDLFLF Trigger: GAAGAGGAAGAGGTCATGATAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 90 bp | GGAGTCTCTATTGTCTCTACAAAGCGAGTTCCTTCAGAGACAGCGTaGTATACCGCCGAGGTCACTTCACTAGAGCTTGCACTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GVSIVSTKRVPSETA*YTAEVTSLELALSL Trigger: CAAGGAGAGTGCAAGCTCTAGTGAAGTGACCTCGGCGGTATACAACGCTGTCTCTGAAGGAACTCGCTTTGTAGAGACAATAGAGACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS TCA 72 bp | TATCCCTGTTGCCATTCCAAGGTAGGCCAACATGGCTaGCAGAGCATTATAGAGCACAGCCTGCTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: YPCCHSKVGQHG*QSIIEHSLLDS Trigger: ACTGTCAAGCAGGCTGTGCTCTATAATGCTCTGTCAGCCATGTTGGCCTACCTTGGAATGGCAACAGGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS TCA 72 bp | TTCTGCAGGAAGAAATATCCCCAACGGCTGCATCCGTaGTCACTAGCATCATTGTGCAACATCTCAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: FCRKKYPQRLHP*SLASLCNISGT Trigger: GGTGCCTGAGATGTTGCACAATGATGCTAGTGATCACGGATGCAGCCGTTGGGGATATTTCTTCCTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS GCA 72 bp | AGCGTTGTATACCGCCGAGGTCACTTCACTAGAGCTTaGACTCTCCTTGATGTTCCTCCTACCATTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: SVVYRRGHFTRA*TLLDVPPTIHV Trigger: CACATGAATGGTAGGAGGAACATCAAGGAGAGTGCAAGCTCTAGTGAAGTGACCTCGGCGGTATACAACGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 72 bp | TCCGTTGCATTCAACAGAGCCTGGATGCTCATGCCATaGGATGTCAGCAGCTTGGTTGTATTGAAACACTCC | + |
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Preference number: 6 (lower is better) Translates to: SVAFNRAWMLMP*DVSSLVVLKHS Trigger: GGAGTGTTTCAATACAACCAAGCTGCTGACATCCCATGGCATGAGCATCCAGGCTCTGTTGAATGCAACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CCA 72 bp | GCTCAGCAGGAACTTGAAAAATACCCGGTTCATGAGTaGCACCAAGATGACTCCCAGCAGAGACAGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: AQQELEKYPVHE*HQDDSQQRQET Trigger: AGTTTCCTGTCTCTGCTGGGAGTCATCTTGGTGCCACTCATGAACCGGGTATTTTTCAAGTTCCTGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | CGTGGAAGTGTGAATGGCACTTGTTCTTGCAGCCCCTaGGCACATATTCATTGTAGACTTCTTGTGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RGSVNGTCSCSP*AHIHCRLLVGV Trigger: CACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 72 bp | TTTCAGGTCGTTCCCCTGGGTCCACCTTCTCTTCATTaGAGGAAAGCTGAGAGTCGTATTTGGACAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FQVVPLGPPSLH*RKAESRIWTAA Trigger: AGCAGCTGTCCAAATACGACTCTCAGCTTTCCTCAAATGAAGAGAAGGTGGACCCAGGGGAACGACCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 90 bp | GCACTTGTTCTTGCAGCCCCTGGGCACATATTCATTGTAGACTTCTaGTGGGTGTGCATGGGCTATCATGACCTCTTCCTCTTCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: ALVLAAPGHIFIVDF*WVCMGYHDLFLFQH Trigger: ATGTTGGAAGAGGAAGAGGTCATGATAGCCCATGCACACCCACAAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 72 bp | CCAGCGTATCGTGGAAGTGTGAATGGCACTTGTTCTTaGAGCCCCTGGGCACATATTCATTGTAGACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PAYRGSVNGTCS*SPWAHIHCRLL Trigger: AAGAAGTCTACAATGAATATGTGCCCAGGGGCTGCAAGAACAAGTGCCATTCACACTTCCACGATACGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 72 bp | ATTGTCTCTACAAAGCGAGTTCCTTCAGAGACAGCGTaGTATACCGCCGAGGTCACTTCACTAGAGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: IVSTKRVPSETA*YTAEVTSLELA Trigger: TGCAAGCTCTAGTGAAGTGACCTCGGCGGTATACAACGCTGTCTCTGAAGGAACTCGCTTTGTAGAGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS CAA 90 bp | AAGGGTTTACATCTTTGGTGCGTCTCCCAGGTTTTGGAGTCTCTATaGTCTCTACAAAGCGAGTTCCTTCAGAGACAGCGTTGTATACCG | + |
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Preference number: 6 (lower is better) Translates to: KGLHLWCVSQVLESL*SLQSEFLQRQRCIP Trigger: CGGTATACAACGCTGTCTCTGAAGGAACTCGCTTTGTAGAGACAATAGAGACTCCAAAACCTGGGAGACGCACCAAAGATGTAAACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS GCA 72 bp | ATTGATGATGGCTGGGCAGAGATAGTTAAATTCCGTTaGATTCAACAGAGCCTGGATGCTCATGCCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: IDDGWAEIVKFR*IQQSLDAHAMG Trigger: TCCCATGGCATGAGCATCCAGGCTCTGTTGAATGCAACGGAATTTAACTATCTCTGCCCAGCCATCATCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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| CDS GCA 72 bp | ATAGGTCTTTGGAGGGATTTCTGCCTTCTTCTCACTTaGTGTATGAATCAGACAAGCCCGAGCATCAATTTG | + |
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Preference number: 6 (lower is better) Translates to: IGLWRDFCLLLT*CMNQTSPSINL Trigger: CAAATTGATGCTCGGGCTTGTCTGATTCATACAGCAAGTGAGAAGAAGGCAGAAATCCCTCCAAAGACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | CAGACAAGCCCGAGCATCAATTTGATTGATGATGGCTaGGCAGAGATAGTTAAATTCCGTTGCATTCAACAG | + |
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Preference number: 6 (lower is better) Translates to: QTSPSINLIDDG*AEIVKFRCIQQ Trigger: CTGTTGAATGCAACGGAATTTAACTATCTCTGCCCAGCCATCATCAATCAAATTGATGCTCGGGCTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS GCA 72 bp | AGGAAAGCTGAGAGTCGTATTTGGACAGCTGCTTCTTaGTCTCCACATCCTCATCATTTTCAGGTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RKAESRIWTAAS*SPHPHHFQVSF Trigger: AAAAGAAACCTGAAAATGATGAGGATGTGGAGAGCAAGAAGCAGCTGTCCAAATACGACTCTCAGCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CCA 72 bp | AATATAAGCCCCCTAGAGCCGTCAGACCTTTCCACGTaGAATCAAAATAGGAGCTTTCTTCTATATTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: NISPLEPSDLST*NQNRSFLLYSE Trigger: CTCAGAATATAGAAGAAAGCTCCTATTTTGATTCCACGTGGAAAGGTCTGACGGCTCTAGGGGGCTTATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 90 bp | CTTCTTCTCACTTGCTGTATGAATCAGACAAGCCCGAGCATCAATTaGATTGATGATGGCTGGGCAGAGATAGTTAAATTCCGTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: LLLTCCMNQTSPSIN*IDDGWAEIVKFRCI Trigger: AATGCAACGGAATTTAACTATCTCTGCCCAGCCATCATCAATCAAATTGATGCTCGGGCTTGTCTGATTCATACAGCAAGTGAGAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS CAA 72 bp | ACTTGCTGTATGAATCAGACAAGCCCGAGCATCAATTaGATTGATGATGGCTGGGCAGAGATAGTTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: TCCMNQTSPSIN*IDDGWAEIVKF Trigger: GAATTTAACTATCTCTGCCCAGCCATCATCAATCAAATTGATGCTCGGGCTTGTCTGATTCATACAGCAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070726.10 ENSMUST00000154205.2 |
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| CDS TCA 72 bp | AACTGCCAAGTCAACATTAACACCAGGTTCCCAATTTaGATTTATTTTCTCAGTAGTCTGAGAGAAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NCQVNINTRFPI*IYFLSSLRESS Trigger: GCTGCTTTCTCTCAGACTACTGAGAAAATAAATTCAAATTGGGAACCTGGTGTTAATGTTGACTTGGCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070726.10 |
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