Pregenerated sensors for SLC39A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039878Ensembl transcript IDs: ENSMUST00000042666.13, ENSMUST00000167859.2, ENSMUST00000218858.2, ENSMUST00000219131.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGAAGGAAGGGCAACCTaGATCCTCTGCCACTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: IKILLLLLALCPASIPVVEGRAT*ILCHWP Trigger: GGGCCAGTGGCAGAGGATCCAGGTTGCCCTTCCTTC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGCACAGGGCCCAAGCTaGGCCCCACCCCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVAQGPS*APPPGL Trigger: CAGCCCTGGGGGTGGGGCTCAGCTTGGGCCCTGTGC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGGCACAGGGCCCAAGCTaGGCCCCACCCCCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLAQGPS*APPPGL Trigger: CAGCCCTGGGGGTGGGGCTCAGCTTGGGCCCTGTGC...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCAAACACCCAGGGGGTaGGGGGCACAGGGCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVQTPRG*GAQGPS Trigger: GCTTGGGCCCTGTGCCCCTCACCCCCTGGGTGTTTG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCCGCGCCAGGCCCCCTaGAGTCAGTGTCCCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVPRQAP*SQCPVL Trigger: GAGAACGGGACACTGACTGCAGGGGGCCTGGCGCGG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCAAACACCCAGGGGGTaGGGGGCACAGGGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVQTPRG*GAQGPS Trigger: GCTTGGGCCCTGTGCCCCTCACCCCCTGGGTGTTTG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCCGCGCCAGGCCCCCTaGAGTCAGTGTCCCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVPRQAP*SQCPVL Trigger: GAGAACGGGACACTGACTGCAGGGGGCCTGGCGCGG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGAGCTGGGCCCAGGTTTaGGACGGAGCCTCCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVSWAQV*DGASYP Trigger: TGGGTAGGAGGCTCCGTCCCAAACCTGGGCCCAGCT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGGAAAACCCCAGCCGTaGTCCCAAACACCCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVGKPQP*SQTPRG Trigger: CCCCCTGGGTGTTTGGGACCACGGCTGGGGTTTTCC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCACAGCAGAGCGAACTaGCGAGGGGTCAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVHSRAN*RGVRGA Trigger: TGCTCCTCTGACCCCTCGTCAGTTCGCTCTGCTGTG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCCGTCGGTGAGGTTGTaGAGGCAATCTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVPSVRL*RQSPRR Trigger: CCTCCTGGGAGATTGCCTGCACAACCTCACCGACGG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCCTAGTCCTAGGCTGTaGAGAAGCCGCGCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLPSPRL*RSRARP Trigger: GGGCCTGGCGCGGCTTCTCCACAGCCTAGGACTAGG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCCTAGTCCTAGGCTGTaGAGAAGCCGCGCCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVPSPRL*RSRARP Trigger: GGGCCTGGCGCGGCTTCTCCACAGCCTAGGACTAGG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGACTGCCAGGCCACTGTaGAGCAGGGCAGACAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVTARPL*SRADST Trigger: TGTACTGTCTGCCCTGCTTCACAGTGGCCTGGCAGT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGCCCAGAGGCATTCCTaGCCAGATGTCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVAQRHS*PDVHTQ Trigger: CTGAGTGTGGACATCTGGGCAGGAATGCCTCTGGGC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGCTGAGGAACAGGACTaGCAGGCCACTGTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVAEEQD*QATVKQ Trigger: CTGCTTCACAGTGGCCTGGCAGTCCTGTTCCTCAGC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGAGCTGGGCCCAGGTTTaGGACGGAGCCTCCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVSWAQV*DGASYP Trigger: TGGGTAGGAGGCTCCGTCCCAAACCTGGGCCCAGCT...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCAGGAAGCCCAGCACTaGCCGCAACAGACGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLQEAQH*PQQTRS Trigger: GGACCTCGTCTGTTGCGGCCAGTGCTGGGCTTCCTG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGGAAAACCCCAGCCGTaGTCCCAAACACCCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVGKPQP*SQTPRG Trigger: CCCCCTGGGTGTTTGGGACCACGGCTGGGGTTTTCC...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGGCTCAGTCCAAAATTaGCCAGCAGCTGGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVGSVQN*PAAGSH Trigger: ATGGCTCCCAGCTGCTGGTCAATTTTGGACTGAGCC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGACCCAGGTCCTCCTCTaGTTGCTCACTAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVTQVLL*LLTRSC Trigger: ACAGGACCTAGTGAGCAATCAGAGGAGGACCTGGGT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGTTCTCCCTCTGGCCCTaGACCTCTGGTTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVFSLWP*TSGSEA Trigger: AGCTTCAGAACCAGAGGTTCAGGGCCAGAGGGAGAA...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGATACTGCCACCCCGGTaGTCATGGCTGTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLILPPR*SWLWPW Trigger: CCAAGGCCACAGCCATGAGCACCGGGGTGGCAGTAT...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCCGTCGGTGAGGTTGTaGAGGCAATCTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVPSVRL*RQSPRR Trigger: CCTCCTGGGAGATTGCCTGCACAACCTCACCGACGG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGCCTTTGATTCCTCCTaGTCACCCCAACCTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVAFDSS*SPQPEG Trigger: CCCTTCAGGTTGGGGTGACCAGGAGGAATCAAAGGC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCGGAGGTGCTGGAGCTaGGGTTTTGATGCAAACACG | + |
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Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVRRCWS*GFDANT Trigger: CGTGTTTGCATCAAAACCCCAGCTCCAGCACCTCCG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGTCATGGCTGTGGCCTTaGTGCCCAGGAGGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVSWLWP*CPGGAR Trigger: TCTAGCCCCTCCTGGGCACCAAGGCCACAGCCATGA...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTCATGGCTGTGGCCTTaGTGCCCAGGAGGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLSWLWP*CPGGAR Trigger: TCTAGCCCCTCCTGGGCACCAAGGCCACAGCCATGA...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCCCTGCAGAAGCACGTaGAACACAGGCAGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVPCRST*NTGRGS Trigger: TGAGCCCCTGCCTGTGTTCCACGTGCTTCTGCAGGG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGACTGCCAGGCCACTGTaGAGCAGGGCAGACAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVTARPL*SRADST Trigger: TGTACTGTCTGCCCTGCTTCACAGTGGCCTGGCAGT...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGGTGTGTTCTCTAGCATaGAGAGCAGGAAGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVVCSLA*RAGRGH Trigger: GTGGCCTCTTCCTGCTCTTCATGCTAGAGAACACAC...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGGCTGAGGAACAGGACTaGCAGGCCACTGTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLAEEQD*QATVKQ Trigger: CTGCTTCACAGTGGCCTGGCAGTCCTGTTCCTCAGC...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGAAGGACCATCCCACTaGCATCCTCTGGGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVEGPSH*HPLGQG Trigger: ACCCTGACCCAGAGGATGGCAGTGGGATGGTCCTTC...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR GCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGGAAGGACCATCCCACTaGCATCCTCTGGGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLEGPSH*HPLGQG Trigger: ACCCTGACCCAGAGGATGGCAGTGGGATGGTCCTTC...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGTGGTCAGCCAACGAATaGTCCAACAGCAGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVWSANE*SNSRSL Trigger: GAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCA...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGTCGTGGGGCAGCTCGTaGCAGAAGACTGCTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVSWGSS*QKTARV Trigger: TACCCTAGCAGTCTTCTGCCACGAGCTGCCCCACGA...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTCGTGGGGCAGCTCGTaGCAGAAGACTGCTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLSWGSS*QKTARV Trigger: TACCCTAGCAGTCTTCTGCCACGAGCTGCCCCACGA...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGACCCAGGTCCTCCTCTaGTTGCTCACTAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLTQVLL*LLTRSC Trigger: ACAGGACCTAGTGAGCAATCAGAGGAGGACCTGGGT...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCGGAGGTGCTGGAGCTaGGGTTTTGATGCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVRRCWS*GFDANT Trigger: CGTGTTTGCATCAAAACCCCAGCTCCAGCACCTCCG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGGTGTGTTCTCTAGCATaGAGAGCAGGAAGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLVCSLA*RAGRGH Trigger: GTGGCCTCTTCCTGCTCTTCATGCTAGAGAACACAC...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGAACAGCAGAAGCCTCTaGAAGAGGTCTAGGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKILLLLLALCPASIPVNSRSL*KRSRLE Trigger: CTCGAGCCTAGACCTCTTCCAGAGGCTTCTGCTGTT...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTCAGCCAACGAATaGTCCAACAGCAGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLWSANE*SNSRSL Trigger: GAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCA...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCAATCCTCATTCAGATaGTCAGCCAACGAATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVQSSFR*SANEWS Trigger: GGACCATTCGTTGGCTGACCATCTGAATGAGGATTG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS-3UTR CCA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGAAATTGACCAGCAGCTaGGAGCCATTCAGACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IKILLLLLALCPASIPVVKLTSS*EPFRQS Trigger: GGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCTTGCAGCCTGTGTGTaGAATTGTCTCCACTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLLAACV*NCLHLW Trigger: CCACAAGTGGAGACAATTTCACACACAGGCTGCAAG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCTTCCTGAAGCAGCATaGCAAAGTCACCCAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLLPEAA*QSHPVR Trigger: ACGAACTGGGTGACTTTGCCATGCTGCTTCAGGAAG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCAATCCTCATTCAGATaGTCAGCCAACGAATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLQSSFR*SANEWS Trigger: GGACCATTCGTTGGCTGACCATCTGAATGAGGATTG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 90 bp | GCAGCCCGCCCAGTTGGAGGCTCATGGTGTCCCAGACGGAGCCCCTaGACTCGGCCTAGTCCTAGGCTGTGGAGAAGCCGCGCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AARPVGGSWCPRRSP*TRPSPRLWRSRARP Trigger: GGGCCTGGCGCGGCTTCTCCACAGCCTAGGACTAGGCCGAGTCCAGGGGCTCCGTCTGGGACACCATGAGCCTCCAACTGGGCGGGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS CCA 90 bp | TGGTGTCCCAGACGGAGCCCCTGGACTCGGCCTAGTCCTAGGCTGTaGAGAAGCCGCGCCAGGCCCCCTGCAGTCAGTGTCCCGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WCPRRSPWTRPSPRL*RSRARPPAVSVPFS Trigger: AGAGAACGGGACACTGACTGCAGGGGGCCTGGCGCGGCTTCTCCACAGCCTAGGACTAGGCCGAGTCCAGGGGCTCCGTCTGGGACACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS GCA 90 bp | CCCGTCGGTGAGGTTGTGCAGGCAATCTCCCAGGAGGACCATCCATaGGATACTGCCACCCCGGTGCTCATGGCTGTGGCCTTGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGEVVQAISQEDHP*DTATPVLMAVALVP Trigger: GGGCACCAAGGCCACAGCCATGAGCACCGGGGTGGCAGTATCGCATGGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 90 bp | CTCGAGGGCCCTGACCCGTGCAGGTCAGGAGCCTTTGATTCCTCCTaGTCACCCCAACCTGAAGGGCCCAGAGGCATTCCTGCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LEGPDPCRSGAFDSS*SPQPEGPRGIPAQM Trigger: CATCTGGGCAGGAATGCCTCTGGGCCCTTCAGGTTGGGGTGACCAGGAGGAATCAAAGGCTCCTGACCTGCACGGGTCAGGGCCCTCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS CCA 90 bp | AAATTGTCTCCACTTGTGGGTGCAGCCCGCCCAGTTGGAGGCTCATaGTGTCCCAGACGGAGCCCCTGGACTCGGCCTAGTCCTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSPLVGAARPVGGS*CPRRSPWTRPSPRL Trigger: CAGCCTAGGACTAGGCCGAGTCCAGGGGCTCCGTCTGGGACACCATGAGCCTCCAACTGGGCGGGCTGCACCCACAAGTGGAGACAATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS TCA 90 bp | CTGCCCAGATGTCCACACTCAGCTCCGGCTCTTGCAGCCTGTGTGTaGAATTGTCTCCACTTGTGGGTGCAGCCCGCCCAGTTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRCPHSAPALAACV*NCLHLWVQPAQLEA Trigger: AGCCTCCAACTGGGCGGGCTGCACCCACAAGTGGAGACAATTTCACACACAGGCTGCAAGAGCCGGAGCTGAGTGTGGACATCTGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS GCA 90 bp | AGGTCCTCCTCTGATTGCTCACTAGGTCCTGTGTGCCGCCCTCCTTaGGCATGTGGGAGCAGGTGTAGCAGGGCATCCCCACAGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSDCSLGPVCRPP*ACGSRCSRASPQRV Trigger: TACTCTCTGTGGGGATGCCCTGCTACACCTGCTCCCACATGCGCAAGGAGGGCGGCACACAGGACCTAGTGAGCAATCAGAGGAGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS GCA 90 bp | CCGTCTGAGAAAGCAGCACCTAATGCCAGCCCGTCGGTGAGGTTGTaGAGGCAATCTCCCAGGAGGACCATCCATGCGATACTGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PSEKAAPNASPSVRL*RQSPRRTIHAILPP Trigger: GGGTGGCAGTATCGCATGGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGGCTGGCATTAGGTGCTGCTTTCTCAGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCAGCTGGGCCCAGGTTaGGGACGGAGCCTCCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: IKILLLLLALCPASIPVVQLGPG*GRSLLP Trigger: GGGTAGGAGGCTCCGTCCCAAACCTGGGCCCAGCTG...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS TCA 90 bp | TGGAGAAGCCGTCTGAGAAAGCAGCACCTAATGCCAGCCCGTCGGTaGGGTTGTGCAGGCAATCTCCCAGGAGGACCATCCATGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: WRSRLRKQHLMPARR*GCAGNLPGGPSMRY Trigger: GTATCGCATGGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGGCTGGCATTAGGTGCTGCTTTCTCAGACGGCTTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 90 bp | TCATTCAGATGGTCAGCCAACGAATGGTCCAACAGCAGAAGCCTCTaGAAGAGGTCTAGGCTCGAGGGCCCTGACCCGTGCAGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFRWSANEWSNSRSL*KRSRLEGPDPCRSG Trigger: TCCTGACCTGCACGGGTCAGGGCCCTCGAGCCTAGACCTCTTCCAGAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCATCTGAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGTGTGTGCCGCCCTCCTaGCGCATGTGGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKILLLLLALCPASIPVVCVPPS*RMWEQV Trigger: CACCTGCTCCCACATGCGCAAGGAGGGCGGCACACA...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS GCA 90 bp | CCTCTGGTTCTGAAGCTGCCTGTAGGGGTCGAAGGACCATCCCACTaGCATCCTCTGGGTCAGGGTTTGGTTCTCCAAGATCCCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLVLKLPVGVEGPSH*HPLGQGLVLQDPFC Trigger: ACAAAAGGGATCTTGGAGAACCAAACCCTGACCCAGAGGATGGCAGTGGGATGGTCCTTCGACCCCTACAGGCAGCTTCAGAACCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 90 bp | ACTGTGAAGCAGGGCAGACAGTACATCCCCCGGAGGTGCTGGAGCTaGGGTTTTGATGCAAACACGGCTGTCAATCTGATAAAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVKQGRQYIPRRCWS*GFDANTAVNLIKQG Trigger: GCCCTGCTTTATCAGATTGACAGCCGTGTTTGCATCAAAACCCCAGCTCCAGCACCTCCGGGGGATGTACTGTCTGCCCTGCTTCACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGGTGCAGCCCGCCCAGTaGGAGGCTCATGGTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLVQPAQ*EAHGVP Trigger: TGGGACACCATGAGCCTCCAACTGGGCGGGCTGCAC...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGCAGCCCGCCCAGTaGGAGGCTCATGGTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIKILLLLLALCPASIPVVQPAQ*EAHGVP Trigger: TGGGACACCATGAGCCTCCAACTGGGCGGGCTGCAC...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGTGTGCCGCCCTCCTaGCGCATGTGGGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLCVPPS*RMWEQV Trigger: CACCTGCTCCCACATGCGCAAGGAGGGCGGCACACA...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 90 bp | TGGGAGCCATTCAGACAATCCTCATTCAGATGGTCAGCCAACGAATaGTCCAACAGCAGAAGCCTCTGGAAGAGGTCTAGGCTCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WEPFRQSSFRWSANE*SNSRSLWKRSRLEG Trigger: GCCCTCGAGCCTAGACCTCTTCCAGAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCATCTGAATGAGGATTGTCTGAATGGCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS TCA 90 bp | CGAACTGACGAGGGGTCAGAGGAGCAACAGGGCTCAGTCCAAAATTaGCCAGCAGCTGGGAGCCATTCAGACAATCCTCATTCAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTDEGSEEQQGSVQN*PAAGSHSDNPHSDG Trigger: ACCATCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGACTGAGCCCTGTTGCTCCTCTGACCCCTCGTCAGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS GCA 90 bp | CCAAGATCCCTTTTGTTCCTGCAGCATCTTGGCCTGAGCCCTCTGTaGCGCACAAGTCCTAGTGTGTTCTCTAGCATGAAGAGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSLLFLQHLGLSPL*RTSPSVFSSMKSRK Trigger: CTTCCTGCTCTTCATGCTAGAGAACACACTAGGACTTGTGCGGCACAGAGGGCTCAGGCCAAGATGCTGCAGGAACAAAAGGGATCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGACTCAGCTCCGGCTCTaGCAGCCTGTGTGTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: IKILLLLLALCPASIPVVTQLRL*QPVCEI Trigger: AATTTCACACACAGGCTGCAAGAGCCGGAGCTGAGT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGAGCCTGTGTGTGAAATaGTCTCCACTTGTGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKILLLLLALCPASIPVVSLCVK*SPLVGA Trigger: TGCACCCACAAGTGGAGACAATTTCACACACAGGCT...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGGTGTCTCCAAGATCCCTTTaGTTCCTGCAGCATCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IKILLLLLALCPASIPVVSPRSL*FLQHLG Trigger: GCCAAGATGCTGCAGGAACAAAAGGGATCTTGGAGA...CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGCCTCTGGGTCAGGGTTaGGTTCTCCAAGATCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIKILLLLLALCPASIPVPLGQG*VLQDPF Trigger: AAAGGGATCTTGGAGAACCAAACCCTGACCCAGAGG...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGCCTCTGGGTCAGGGTTaGGTTCTCCAAGATCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLKSYCSYWPCVPPPFLPLGQG*VLQDPF Trigger: AAAGGGATCTTGGAGAACCAAACCCTGACCCAGAGG...CAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAAATCCTATTGCTCCTACTGGCCCTGTGTCCCGCCTCCATTCCTGTGTCTCCAAGATCCCTTTaGTTCCTGCAGCATCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIKILLLLLALCPASIPVSPRSL*FLQHLG Trigger: GCCAAGATGCTGCAGGAACAAAAGGGATCTTGGAGA...CACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTTTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 72 bp | AGACGGAGCCCCTGGACTCGGCCTAGTCCTAGGCTGTaGAGAAGCCGCGCCAGGCCCCCTGCAGTCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRSPWTRPSPRL*RSRARPPAVSV Trigger: GACACTGACTGCAGGGGGCCTGGCGCGGCTTCTCCACAGCCTAGGACTAGGCCGAGTCCAGGGGCTCCGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS CCA 72 bp | CCACTTGTGGGTGCAGCCCGCCCAGTTGGAGGCTCATaGTGTCCCAGACGGAGCCCCTGGACTCGGCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLVGAARPVGGS*CPRRSPWTRPS Trigger: ACTAGGCCGAGTCCAGGGGCTCCGTCTGGGACACCATGAGCCTCCAACTGGGCGGGCTGCACCCACAAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS CAA 72 bp | GGCTCGAGGGCCCTGACCCGTGCAGGTCAGGAGCCTTaGATTCCTCCTGGTCACCCCAACCTGAAGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSRALTRAGQEP*IPPGHPNLKGP Trigger: TGGGCCCTTCAGGTTGGGGTGACCAGGAGGAATCAAAGGCTCCTGACCTGCACGGGTCAGGGCCCTCGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS GCA 72 bp | AGCACCGACAGTCCCGGACCCAGGTCCTCCTCTGATTaGTCACTAGGTCCTGTGTGCCGCCCTCCTTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: STDSPGPRSSSD*SLGPVCRPPCA Trigger: TGCGCAAGGAGGGCGGCACACAGGACCTAGTGAGCAATCAGAGGAGGACCTGGGTCCGGGACTGTCGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 72 bp | GTAGTGGTTCTGTTCCTGTTCAGCTGGGCCCAGGTTTaGGACGGAGCCTCCTACCCAGCCCAAGGCCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVVLFLFSWAQV*DGASYPAQGHP Trigger: GGGGTGGCCTTGGGCTGGGTAGGAGGCTCCGTCCCAAACCTGGGCCCAGCTGAACAGGAACAGAACCACTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS CAA 90 bp | AGAGGTCTAGGCTCGAGGGCCCTGACCCGTGCAGGTCAGGAGCCTTaGATTCCTCCTGGTCACCCCAACCTGAAGGGCCCAGAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLGSRALTRAGQEP*IPPGHPNLKGPEAF Trigger: GAATGCCTCTGGGCCCTTCAGGTTGGGGTGACCAGGAGGAATCAAAGGCTCCTGACCTGCACGGGTCAGGGCCCTCGAGCCTAGACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS TCA 72 bp | ACCAAGCACCGACAGTCCCGGACCCAGGTCCTCCTCTaGTTGCTCACTAGGTCCTGTGTGCCGCCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TKHRQSRTQVLL*LLTRSCVPPSL Trigger: CAAGGAGGGCGGCACACAGGACCTAGTGAGCAATCAGAGGAGGACCTGGGTCCGGGACTGTCGGTGCTTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 72 bp | CAACTGGGCCAGGTAGTGGTTCTGTTCCTGTTCAGCTaGGCCCAGGTTTGGGACGGAGCCTCCTACCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLGQVVVLFLFS*AQVWDGASYPA Trigger: GGCTGGGTAGGAGGCTCCGTCCCAAACCTGGGCCCAGCTGAACAGGAACAGAACCACTACCTGGCCCAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS CCA 72 bp | AGGACCATCCATGCGATACTGCCACCCCGGTGCTCATaGCTGTGGCCTTGGTGCCCAGGAGGGGCTAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RTIHAILPPRCS*LWPWCPGGARD Trigger: ATCTCTAGCCCCTCCTGGGCACCAAGGCCACAGCCATGAGCACCGGGGTGGCAGTATCGCATGGATGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 72 bp | CCTGACCCGTGCAGGTCAGGAGCCTTTGATTCCTCCTaGTCACCCCAACCTGAAGGGCCCAGAGGCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDPCRSGAFDSS*SPQPEGPRGIP Trigger: AGGAATGCCTCTGGGCCCTTCAGGTTGGGGTGACCAGGAGGAATCAAAGGCTCCTGACCTGCACGGGTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS CCA 72 bp | TGGTCAGCCAACGAATGGTCCAACAGCAGAAGCCTCTaGAAGAGGTCTAGGCTCGAGGGCCCTGACCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSANEWSNSRSL*KRSRLEGPDPC Trigger: GCACGGGTCAGGGCCCTCGAGCCTAGACCTCTTCCAGAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
||
| CDS TCA 72 bp | TGTCCACACTCAGCTCCGGCTCTTGCAGCCTGTGTGTaGAATTGTCTCCACTTGTGGGTGCAGCCCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPHSAPALAACV*NCLHLWVQPAQ Trigger: CTGGGCGGGCTGCACCCACAAGTGGAGACAATTTCACACACAGGCTGCAAGAGCCGGAGCTGAGTGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
||
| CDS TCA 72 bp | CGTCTGAGAAAGCAGCACCTAATGCCAGCCCGTCGGTaGGGTTGTGCAGGCAATCTCCCAGGAGGACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLRKQHLMPARR*GCAGNLPGGPS Trigger: GGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGGCTGGCATTAGGTGCTGCTTTCTCAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
||
| CDS CCA 72 bp | AGCATGGCAAAGTCACCCAGTTCGTGGGGCAGCTCGTaGCAGAAGACTGCTAGGGTAGTGCTGAGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SMAKSPSSWGSS*QKTARVVLRPL Trigger: CAGTGGCCTCAGCACTACCCTAGCAGTCTTCTGCCACGAGCTGCCCCACGAACTGGGTGACTTTGCCATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS CAA 90 bp | AAGCCGTCTGAGAAAGCAGCACCTAATGCCAGCCCGTCGGTGAGGTaGTGCAGGCAATCTCCCAGGAGGACCATCCATGCGATACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KPSEKAAPNASPSVR*CRQSPRRTIHAILP Trigger: TGGCAGTATCGCATGGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGGCTGGCATTAGGTGCTGCTTTCTCAGACGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS GCA 72 bp | TTGCAGCCTGTGTGTGAAATTGTCTCCACTTGTGGGTaGAGCCCGCCCAGTTGGAGGCTCATGGTGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQPVCEIVSTCG*SPPSWRLMVSQ Trigger: CTGGGACACCATGAGCCTCCAACTGGGCGGGCTGCACCCACAAGTGGAGACAATTTCACACACAGGCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
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| CDS CAA 72 bp | ACACTCAGCTCCGGCTCTTGCAGCCTGTGTGTGAAATaGTCTCCACTTGTGGGTGCAGCCCGCCCAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TLSSGSCSLCVK*SPLVGAARPVG Trigger: TCCAACTGGGCGGGCTGCACCCACAAGTGGAGACAATTTCACACACAGGCTGCAAGAGCCGGAGCTGAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
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| CDS CAA 90 bp | CCACTGCCATCCTCTGGGTCAGGGTTTGGTTCTCCAAGATCCCTTTaGTTCCTGCAGCATCTTGGCCTGAGCCCTCTGTGCCGCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: PLPSSGSGFGSPRSL*FLQHLGLSPLCRTS Trigger: ACTTGTGCGGCACAGAGGGCTCAGGCCAAGATGCTGCAGGAACAAAAGGGATCTTGGAGAACCAAACCCTGACCCAGAGGATGGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS GCA 72 bp | CTGAAGCTGCCTGTAGGGGTCGAAGGACCATCCCACTaGCATCCTCTGGGTCAGGGTTTGGTTCTCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LKLPVGVEGPSH*HPLGQGLVLQD Trigger: ATCTTGGAGAACCAAACCCTGACCCAGAGGATGGCAGTGGGATGGTCCTTCGACCCCTACAGGCAGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS GCA 72 bp | AAAGCAGCACCTAATGCCAGCCCGTCGGTGAGGTTGTaGAGGCAATCTCCCAGGAGGACCATCCATGCGATA | + |
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Preference number: 6 (lower is better) Translates to: KAAPNASPSVRL*RQSPRRTIHAI Trigger: TATCGCATGGATGGTCCTCCTGGGAGATTGCCTGCACAACCTCACCGACGGGCTGGCATTAGGTGCTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS TCA 72 bp | CTCTGTGCCGCACAAGTCCTAGTGTGTTCTCTAGCATaGAGAGCAGGAAGAGGCCACCAAGCACCGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LCAAQVLVCSLA*RAGRGHQAPTV Trigger: GACTGTCGGTGCTTGGTGGCCTCTTCCTGCTCTTCATGCTAGAGAACACACTAGGACTTGTGCGGCACAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS CAA 72 bp | TCCTCTGGGTCAGGGTTTGGTTCTCCAAGATCCCTTTaGTTCCTGCAGCATCTTGGCCTGAGCCCTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSGSGFGSPRSL*FLQHLGLSPLC Trigger: GCACAGAGGGCTCAGGCCAAGATGCTGCAGGAACAAAAGGGATCTTGGAGAACCAAACCCTGACCCAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 |
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| CDS TCA 72 bp | GAGGGGTCAGAGGAGCAACAGGGCTCAGTCCAAAATTaGCCAGCAGCTGGGAGCCATTCAGACAATCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: EGSEEQQGSVQN*PAAGSHSDNPH Trigger: ATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGACTGAGCCCTGTTGCTCCTCTGACCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
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| CDS GCA 72 bp | ATTCCTGCCCAGATGTCCACACTCAGCTCCGGCTCTTaGAGCCTGTGTGTGAAATTGTCTCCACTTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: IPAQMSTLSSGS*SLCVKLSPLVG Trigger: ACCCACAAGTGGAGACAATTTCACACACAGGCTGCAAGAGCCGGAGCTGAGTGTGGACATCTGGGCAGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000218858.2 ENSMUST00000219131.2 |
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| CDS CCA 72 bp | AGCAGCTGGGAGCCATTCAGACAATCCTCATTCAGATaGTCAGCCAACGAATGGTCCAACAGCAGAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSWEPFRQSSFR*SANEWSNSRSL Trigger: GAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCATCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
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| CDS CCA 72 bp | GGAGCAACAGGGCTCAGTCCAAAATTGACCAGCAGCTaGGAGCCATTCAGACAATCCTCATTCAGATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GATGLSPKLTSS*EPFRQSSFRWS Trigger: TGACCATCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGACTGAGCCCTGTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
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| CDS CCA 72 bp | TTCAGACAATCCTCATTCAGATGGTCAGCCAACGAATaGTCCAACAGCAGAAGCCTCTGGAAGAGGTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: FRQSSFRWSANE*SNSRSLWKRSR Trigger: CCTAGACCTCTTCCAGAGGCTTCTGCTGTTGGACCATTCGTTGGCTGACCATCTGAATGAGGATTGTCTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042666.13 ENSMUST00000167859.2 ENSMUST00000219131.2 |
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