Pregenerated sensors for SLC39A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072572Ensembl transcript IDs: ENSMUST00000047726.12
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGGTGTTCCCTGCCCGTGCCATCGGCACACACCAGGCTCTCCTaGGCACCTTGCTCTGTGCAACTCATGCTGAGCACACAGCAACCG | + |
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Preference number: 1 (lower is better) Translates to: HRCSLPVPSAHTRLS*APCSVQLMLSTQQP Trigger: CGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAGCAAGGTGCTCAGGAGAGCCTGGTGTGTGCCGATGGCACGGGCAGGGAACACCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR GCA 90 bp | AAACAGCAGCGCAGCACCTGTCACATCACAGGTGTTCCCTGCCCGTaGCATCGGCACACACCAGGCTCTCCTGAGCACCTTGCTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KQQRSTCHITGVPCP*HRHTPGSPEHLALC Trigger: GCACAGAGCAAGGTGCTCAGGAGAGCCTGGTGTGTGCCGATGGCACGGGCAGGGAACACCTGTGATGTGACAGGTGCTGCGCTGCTGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR TCA 90 bp | CACACACCAGGCTCTCCTGAGCACCTTGCTCTGTGCAACTCATGCTaGGCACACAGCAACCGGACTGTGTTTCACAGAAAATATCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: HTPGSPEHLALCNSC*AHSNRTVFHRKYPH Trigger: GTGGGGATATTTTCTGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAGCAAGGTGCTCAGGAGAGCCTGGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR CCA 90 bp | CGTCTGTCAGGAGTAACTGCCTTCTGCACTATCTTTAGTAGCAGTTaGTCAGGGAGACAGAAGGAAGTCACTAGGTGGTTACACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RLSGVTAFCTIFSSS*SGRQKEVTRWLHLR Trigger: TCTGAGGTGTAACCACCTAGTGACTTCCTTCTGTCTCCCTGACCAACTGCTACTAAAGATAGTGCAGAAGGCAGTTACTCCTGACAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR CAA 90 bp | CAAGAAAGGGCAAACTGGTGGGGGCAAACCAACTGCAGAGCCCGTTaGTCCTTCCCCAACTCTTCACTAAGTGTGAGATCCTCCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QERANWWGQTNCRAR*SFPNSSLSVRSSSQ Trigger: CTGGCTGGAGGATCTCACACTTAGTGAAGAGTTGGGGAAGGACAAACGGGCTCTGCAGTTGGTTTGCCCCCACCAGTTTGCCCTTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGTTCCCTGCCCGTGCCATCGGCACACACCAGGCTCTCCTGAGCACCTTGAGGGAACAGGTAAAATaGGACTTTTATTACACACAA | + |
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Preference number: 2 (lower is better) Translates to: QVFPARAIGTHQALLSTLREQVK*DFYYTQ Trigger: TTGTGTGTAATAAAAGTCCCATTTTACCTGTTCCCT...CAAGGTGCTCAGGAGAGCCTGGTGTGTGCCGATGGCACGGGCAGGGAACACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR-3UTR TCA 90 bp | CATGCTGAGCACACAGCAACCGGACTGTGTTTCACAGAAAATATCCCCACCCCCCAGAGGAAAGAAGATTaGGACATGAATGACTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HAEHTATGLCFTENIPTPQRKED*DMNDFR Trigger: CCTGAAGTCATTCATGTCTCAATCTTCTTTCCTCTG...GGGGGTGGGGATATTTTCTGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTGCAACTCATGCTGAGCACACAGCAACCGGACTGTGTTTCACAGAAAATCATTGCCCACCCATTTaGTTTTTCCTTGATCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LCATHAEHTATGLCFTENHCPPI*FFLDPW Trigger: CCAGGGATCAAGGAAAAAGCAAATGGGTGGGCAATG...ATTTTCTGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR GCA 72 bp | CAGCAGCGCAGCACCTGTCACATCACAGGTGTTCCCTaGCCGTGCCATCGGCACACACCAGGCTCTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QQRSTCHITGVP*PCHRHTPGSPE Trigger: CTCAGGAGAGCCTGGTGTGTGCCGATGGCACGGGCAGGGAACACCTGTGATGTGACAGGTGCTGCGCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR TCA 72 bp | TCCCTGCCCGTGCCATCGGCACACACCAGGCTCTCCTaGGCACCTTGCTCTGTGCAACTCATGCTGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SLPVPSAHTRLS*APCSVQLMLST Trigger: TGTGCTCAGCATGAGTTGCACAGAGCAAGGTGCTCAGGAGAGCCTGGTGTGTGCCGATGGCACGGGCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR TCA 72 bp | GGCTCTCCTGAGCACCTTGCTCTGTGCAACTCATGCTaGGCACACAGCAACCGGACTGTGTTTCACAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GSPEHLALCNSC*AHSNRTVFHRK Trigger: TTTTCTGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAGCAAGGTGCTCAGGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR CCA 72 bp | GGAGTAACTGCCTTCTGCACTATCTTTAGTAGCAGTTaGTCAGGGAGACAGAAGGAAGTCACTAGGTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GVTAFCTIFSSS*SGRQKEVTRWL Trigger: TAACCACCTAGTGACTTCCTTCTGTCTCCCTGACCAACTGCTACTAAAGATAGTGCAGAAGGCAGTTACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGAGAAGCTCAGAGGATAGCAGTAGTATCCTAGAGGGAGGCTACACAAGAAGAATTGCAATGAGGTaGAAGGGAACAGGTAAAATG | + |
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Preference number: 3 (lower is better) Translates to: SQRSSEDSSSILEGGYTRRIAMR*KGTGKM Trigger: CATTTTACCTGTTCCCTTCAACCTCATTGCAATTCT...TCTTGTGTAGCCTCCCTCTAGGATACTACTGCTATCCTCTGAGCTTCTCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR-3UTR CAA 90 bp | TGGAGACTGGATTTAGCTTTCTTACTTTTTCAGGAGGGGAACACAGAGGAAAGAATTTGGGCTATCACATaGAAAATCACAAGAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: WRLDLAFLLFQEGNTEERIWAIT*KITRKG Trigger: GCCCTTTCTTGTGATTTTCAATGTGATAGCCCAAAT...TCTTTCCTCTGTGTTCCCCTCCTGAAAAAGTAAGAAAGCTAAATCCAGTCTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | AGCAGCGCAGCACCTGTCACATCACAGGTGTTCCCTGCCCGTGCCATCGGCACACCTTCGAACACGGAATaGAAGGACAGGGAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSAAPVTSQVFPARAIGTPSNTE*KDRESR Trigger: TCTGCTCTCCCTGTCCTTTCATTCCGTGTTCGAAGG...TGTGCCGATGGCACGGGCAGGGAACACCTGTGATGTGACAGGTGCTGCGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | ACCTTGCTCTGTGCAACTCATGCTGAGCACACAGCAACCGGACTGTGTTTCACACCTCCAGCAGCCCCGTaGCAGCACTGCAATGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLCATHAEHTATGLCFTPPAAP*QHCNAS Trigger: GCTGGCATTGCAGTGCTGTCACGGGGCTGCTGGAGG...TGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAGCAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | CAAGAAAGGGCAAACTGGTGGGGGCAAACCAACTGCAGAGCCCGTTTGTCCTTCGGCCCACAGGAGACATaGGAGCTAGTGACAGTATGC | + |
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Preference number: 4 (lower is better) Translates to: QERANWWGQTNCRARLSFGPQET*ELVTVC Trigger: GCATACTGTCACTAGCTCTCATGTCTCCTGTGGGCC...GAAGGACAAACGGGCTCTGCAGTTGGTTTGCCCCCACCAGTTTGCCCTTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| 3UTR CAA 72 bp | GCAAACTGGTGGGGGCAAACCAACTGCAGAGCCCGTTaGTCCTTCCCCAACTCTTCACTAAGTGTGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: ANWWGQTNCRAR*SFPNSSLSVRS Trigger: GGATCTCACACTTAGTGAAGAGTTGGGGAAGGACAAACGGGCTCTGCAGTTGGTTTGCCCCCACCAGTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | AGCCAGAGAAGCTCAGAGGATAGCAGTAGTATCCTAGAGGGAGGCTACACAAGAACCACAAGCCCCTTATaGGCCAGCACAGCGACACAG | + |
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Preference number: 4 (lower is better) Translates to: SQRSSEDSSSILEGGYTRTTSPL*ASTATQ Trigger: CTGTGTCGCTGTGCTGGCTCATAAGGGGCTTGTGGT...TCTTGTGTAGCCTCCCTCTAGGATACTACTGCTATCCTCTGAGCTTCTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGAAGCTCAGAGGATAGCAGTAGTATCCTAGAGGGAGGCTACACAAGACACAGAGCTGTATGGTaGCCGCCACTGTGGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SQRSSEDSSSILEGGYTRHRAVW*PPLWPV Trigger: TACAGGCCACAGTGGCGGCCACCATACAGCTCTGTG...TCTTGTGTAGCCTCCCTCTAGGATACTACTGCTATCCTCTGAGCTTCTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGAAGCTCAGAGGATAGCAGTAGTATCCTAGAGGGAGGCTACACAAGACCACACAGCTATACTTaGCCAGAGGGGCCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SQRSSEDSSSILEGGYTRPHSYT*PEGPQD Trigger: GTCCTGAGGCCCCTCTGGCCAAGTATAGCTGTGTGG...TCTTGTGTAGCCTCCCTCTAGGATACTACTGCTATCCTCTGAGCTTCTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | CTCTGTGCAACTCATGCTGAGCACACAGCAACCGGACTGTGTTTCACAGAAAATGGCCACAGCCCAGTGTaGGAACCAGAAGAGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCATHAEHTATGLCFTENGHSPV*EPEEQA Trigger: TGCTTGCTCTTCTGGTTCTCACACTGGGCTGTGGCC...ATTTTCTGTGAAACACAGTCCGGTTGCTGTGTGCTCAGCATGAGTTGCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | CCACCCCACCCACTTTTCCTCTATCAGAGGCAGAATTGCAATGAGGTTGAAGGGAAAAGCCCAGGGAGATaGCGAGCTCTCCATAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PPHPLFLYQRQNCNEVEGKSPGR*RALHRD Trigger: ATCCCTATGGAGAGCTCGTCATCTCCCTGGGCTTTT...CCCTTCAACCTCATTGCAATTCTGCCTCTGATAGAGGAAAAGTGGGTGGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR CCA 90 bp | GGCAGAATTGCAATGAGGTTGAAGGGAACAGGTAAAATGGGACTTTTATTACACTGGTGGCCGCCACTGTaGCCTGTAGTCCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRIAMRLKGTGKMGLLLHWWPPL*PVVPQP Trigger: TGGCTGTGGGACTACAGGCCACAGTGGCGGCCACCA...GTGTAATAAAAGTCCCATTTTACCTGTTCCCTTCAACCTCATTGCAATTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR GCA 90 bp | TACACCTCAGATAATCACACTAGGTATTTATCTGGCGCCGGTCCCCTTCTGCAAGCTTCAGCAGTCATATaGATCAACCCTGCTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: YTSDNHTRYLSGAGPLLQASAVI*INPAPK Trigger: CTTGGGAGCAGGGTTGATGCATATGACTGCTGAAGC...TTGCAGAAGGGGACCGGCGCCAGATAAATACCTAGTGTGATTATCTGAGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | GGCAGAATTGCAATGAGGTTGAAGGGAACAGGTAAAATGGGACTTTTATTACACGCCTCAGGCCCACACTaGACACCACAAGCCCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: GRIAMRLKGTGKMGLLLHASGPH*TPQAPY Trigger: ATAAGGGGCTTGTGGTGTTCAGTGTGGGCCTGAGGC...GTGTAATAAAAGTCCCATTTTACCTGTTCCCTTCAACCTCATTGCAATTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR CCA 90 bp | TACACCTCAGATAATCACACTAGGTATTTATCTGGCGCCGGTCCCCTTCTGCAACCCTCTAATACAGCCTaGGCTAATCCCTGTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: YTSDNHTRYLSGAGPLLQPSNTA*ANPCVC Trigger: ACAAACACAGGGATTAGCCCAGGCTGTATTAGAGGG...TTGCAGAAGGGGACCGGCGCCAGATAAATACCTAGTGTGATTATCTGAGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | AGCCAGAGAAGCTCAGAGGATAGCAGTAGTATCCTAGAGGGAGGCTACACAAGAGAATTTCTGAATTTCTaGCTCAATTCCCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SQRSSEDSSSILEGGYTREFLNF*LNSLQS Trigger: GCTCTGGAGGGAATTGAGTCAGAAATTCAGAAATTC...TCTTGTGTAGCCTCCCTCTAGGATACTACTGCTATCCTCTGAGCTTCTCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR GCA 90 bp | CATGCAAACAAAACATTCTTTCTAAGTCCTGAGCAAGGACAGGATCTCACGTGTGTGACAGCACTGCAATaGCAGCGACTCCAAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HANKTFFLSPEQGQDLTCVTALQ*QRLQKE Trigger: TTCCTTTTGGAGTCGCTGGCATTGCAGTGCTGTCAC...ACACGTGAGATCCTGTCCTTGCTCAGGACTTAGAAAGAATGTTTTGTTTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS-3UTR TCA 90 bp | AACCAACTGCAGAGCCCGTTTGTCCTTCCCCAACTCTTCACTAAGTGTGAGATCAAATTTCTAGGAAGGTaGCATATAAAAACGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NQLQSPFVLPQLFTKCEIKFLGR*HIKTCQ Trigger: CTGGCACGTTTTTATATGTCACCTTCCTAGAAATTT...GATCTCACACTTAGTGAAGAGTTGGGGAAGGACAAACGGGCTCTGCAGTTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS CCA 90 bp | CCACAAGCCCCTTATGAGCCAGCACAGCGACACAGAGCTGTATGGTaGCCGCCACTGTGGCCTGTAGTCCCACAGCCAGGCCTTCGAACA | + |
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Preference number: 5 (lower is better) Translates to: PQAPYEPAQRHRAVW*PPLWPVVPQPGLRT Trigger: TGTTCGAAGGCCTGGCTGTGGGACTACAGGCCACAGTGGCGGCCACCATACAGCTCTGTGTCGCTGTGCTGGCTCATAAGGGGCTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS GCA 90 bp | AGCTTCAGCAGTCATATGCATCAACCCTGCTCCCAAGAAGACACCTaGAGAGGTGCAGCCCAGGAGGCTGAGGACCCTGTGGTGATGACC | + |
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Preference number: 5 (lower is better) Translates to: SFSSHMHQPCSQEDT*RGAAQEAEDPVVMT Trigger: GGTCATCACCACAGGGTCCTCAGCCTCCTGGGCTGCACCTCTGCAGGTGTCTTCTTGGGAGCAGGGTTGATGCATATGACTGCTGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 90 bp | CGTGAGGGTGAGGGTACCGCTGGATGCTTGTGGAATCCAAAGGCATaGGTCCCTCCCCATTCCTCTTCCTGTACTGTCGATCCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: REGEGTAGCLWNPKA*VPPHSSSCTVDPPA Trigger: TGCTGGAGGATCGACAGTACAGGAAGAGGAATGGGGAGGGACTCATGCCTTTGGATTCCACAAGCATCCAGCGGTACCCTCACCCTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 90 bp | TCCCTTACTTCCTGTACTATTCTGTTCCACGAATTTCTGAATTTCTaGCTCAATTCCCTCCAGAGCTTCAGCAGTCATATGCATCAACCC | + |
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Preference number: 5 (lower is better) Translates to: SLTSCTILFHEFLNF*LNSLQSFSSHMHQP Trigger: GGGTTGATGCATATGACTGCTGAAGCTCTGGAGGGAATTGAGTCAGAAATTCAGAAATTCGTGGAACAGAATAGTACAGGAAGTAAGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 90 bp | GAAGAATTTCCCTTACTTCCTGTACTATTCTGTTCCACGAATTTCTaGATTTCTGACTCAATTCCCTCCAGAGCTTCAGCAGTCATATGC | + |
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Preference number: 5 (lower is better) Translates to: EEFPLLPVLFCSTNF*ISDSIPSRASAVIC Trigger: GCATATGACTGCTGAAGCTCTGGAGGGAATTGAGTCAGAAATTCAGAAATTCGTGGAACAGAATAGTACAGGAAGTAAGGGAAATTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 72 bp | GCCTGTAGTCCCACAGCCAGGCCTTCGAACACGGAATaGAAGGACAGGGAGAGCAGAAGGACCAGGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: ACSPTARPSNTE*KDRESRRTRAR Trigger: GCGCGCCCTGGTCCTTCTGCTCTCCCTGTCCTTTCATTCCGTGTTCGAAGGCCTGGCTGTGGGACTACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS CCA 72 bp | CCTTATGAGCCAGCACAGCGACACAGAGCTGTATGGTaGCCGCCACTGTGGCCTGTAGTCCCACAGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PYEPAQRHRAVW*PPLWPVVPQPG Trigger: GCCTGGCTGTGGGACTACAGGCCACAGTGGCGGCCACCATACAGCTCTGTGTCGCTGTGCTGGCTCATAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 72 bp | TCCTCTTCCTGTACTGTCGATCCTCCAGCAGCCCCGTaGCAGCACTGCAATGCCAGCGACTCCAAAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSCTVDPPAAP*QHCNASDSKRK Trigger: CTTCCTTTTGGAGTCGCTGGCATTGCAGTGCTGTCACGGGGCTGCTGGAGGATCGACAGTACAGGAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 72 bp | GAGGGTACCGCTGGATGCTTGTGGAATCCAAAGGCATaGGTCCCTCCCCATTCCTCTTCCTGTACTGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: EGTAGCLWNPKA*VPPHSSSCTVD Trigger: ATCGACAGTACAGGAAGAGGAATGGGGAGGGACTCATGCCTTTGGATTCCACAAGCATCCAGCGGTACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS GCA 72 bp | CAGGAGGCTGAGGACCCTGTGGTGATGACCTGTAGCTaGATCCATCTGGAACCATTTCACGTAGATGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: QEAEDPVVMTCS*IHLEPFHVDGS Trigger: ACTCCCATCTACGTGAAATGGTTCCAGATGGATGCAGCTACAGGTCATCACCACAGGGTCCTCAGCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS CCA 72 bp | AAAAACGTGCCAGCGGCTATGCCCTCTAATACAGCCTaGGCTAATCCCTGTGTTTGTCCTGAGGCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: KNVPAAMPSNTA*ANPCVCPEAPP Trigger: TGGAGGAGCCTCAGGACAAACACAGGGATTAGCCCAGGCTGTATTAGAGGGCATAGCCGCTGGCACGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 72 bp | CCCTTACTTCCTGTACTATTCTGTTCCACGAATTTCTaGATTTCTGACTCAATTCCCTCCAGAGCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PLLPVLFCSTNF*ISDSIPSRASA Trigger: TGCTGAAGCTCTGGAGGGAATTGAGTCAGAAATTCAGAAATTCGTGGAACAGAATAGTACAGGAAGTAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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| CDS TCA 72 bp | TCCTGTACTATTCTGTTCCACGAATTTCTGAATTTCTaGCTCAATTCCCTCCAGAGCTTCAGCAGTCATATG | + |
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Preference number: 6 (lower is better) Translates to: SCTILFHEFLNF*LNSLQSFSSHM Trigger: CATATGACTGCTGAAGCTCTGGAGGGAATTGAGTCAGAAATTCAGAAATTCGTGGAACAGAATAGTACAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047726.12 |
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