Pregenerated sensors for SLC39A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002105Ensembl transcript IDs: ENSMUST00000073575.12, ENSMUST00000079976.10, ENSMUST00000111436.3, ENSMUST00000153367.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTaGGGCATGCATGCCTGCTGGACCCTGTGCTGGCAGGAGCATCCC | + |
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Preference number: 1 (lower is better) Translates to: RAPELERAARLTVSA*GMHACWTLCWQEHP Trigger: GGGATGCTCCTGCCAGCACAGGGTCCAGCAGGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 90 bp | GCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATaGCTGCTGGACCCTGTGCTGGCAGGAGCATCCCGGAGAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: AGEGSKAHCLCLGHA*LLDPVLAGASRRAV Trigger: CACAGCTCTCCGGGATGCTCCTGCCAGCACAGGGTCCAGCAGGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 90 bp | GCCTGCTGGACCCTGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTaGGAGACGGCTAGCCTGGACTACTTGCTGACTTGCAGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ACWTLCWQEHPGELC*ETASLDYLLTCRLL Trigger: CAGCAGCCTGCAAGTCAGCAAGTAGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACAGGGTCCAGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 90 bp | ACCCAGGGGTCACAGTGTCGGTCTCTCTCCCACTCTGGCTGCGTGTaGACACCACACACCCTCTGTGCAGTGAGAGGCTCCTCTCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: TQGSQCRSLSHSGCV*TPHTLCAVRGSSLA Trigger: TGCTAGAGAGGAGCCTCTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGAGAGAGACCGACACTGTGACCCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR CCA 90 bp | GCAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCAGCTGAGTACCTaGGTGTCAGCCAAGGGAAATAGTTGGGGATTATGGCTTCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: AAGLESGCRLGQLST*VSAKGNSWGLWLQH Trigger: ATGCTGAAGCCATAATCCCCAACTATTTCCCTTGGCTGACACCCAGGTACTCAGCTGGCCCAATCTACAGCCAGACTCCAGCCCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 90 bp | GGATCAGTCAGACTCTTCAGTGGCCACATCTCTAACATCCACAGTTaGGCAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCAGCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: GSVRLFSGHISNIHS*AAGLESGCRLGQLS Trigger: ACTCAGCTGGCCCAATCTACAGCCAGACTCCAGCCCTGCTGCTCAACTGTGGATGTTAGAGATGTGGCCACTGAAGAGTCTGACTGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 90 bp | CACACCCTCTGTGCAGTGAGAGGCTCCTCTCTAGCATTCACCCTCTaGCTCTCACACTTGGTCACAGAACAGACTGGAGTCTCATTGCTC | + |
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Preference number: 1 (lower is better) Translates to: HTLCAVRGSSLAFTL*LSHLVTEQTGVSLL Trigger: GAGCAATGAGACTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAGAGAGGAGCCTCTCACTGCACAGAGGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 90 bp | GGGGATTATGGCTTCAGCATTCTTCCAGTTCACATTCCTGAGCACTaGCAATGTGGAGCCCTCACCACCCCCATCTTACTCTTAACCCAA | + |
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Preference number: 1 (lower is better) Translates to: GDYGFSILPVHIPEH*QCGALTTPILLLTQ Trigger: TTGGGTTAAGAGTAAGATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTGGAAGAATGCTGAAGCCATAATCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 90 bp | AATAGTTGGGGATTATGGCTTCAGCATTCTTCCAGTTCACATTCCTaGGCACTGACAATGTGGAGCCCTCACCACCCCCATCTTACTCTT | + |
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Preference number: 1 (lower is better) Translates to: NSWGLWLQHSSSSHS*ALTMWSPHHPHLTL Trigger: AAGAGTAAGATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTGGAAGAATGCTGAAGCCATAATCCCCAACTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 90 bp | TCTACAGAACAAGTATTTACAGATAAAGATGAGCCACAGCATAACTaGTGTGGATCAGTCAGACTCTTCAGTGGCCACATCTCTAACATC | + |
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Preference number: 1 (lower is better) Translates to: STEQVFTDKDEPQHN*CGSVRLFSGHISNI Trigger: GATGTTAGAGATGTGGCCACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTGTTCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCGGGTGTCTGGGCAGGTaGTACGTTGGGCTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PELERAARLTVSAWGMHAGCLGR*YVGLWA Trigger: AGCCCAGAGCCCAACGTAGCACCTGCCCAGACACCC...GGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | AGGACAAGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCTGCTaGACCCTGTGCTGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RTRAPELERAARLTVSAWGMHAC*TLCWQE Trigger: CTCCTGCCAGCACAGGGTCCAGCAGGCATGCATGCC...CCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | AACGTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGCTCTGTCCCTCTCTTTaGGCTGTAGCCCTGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: NVLARLAAPRERSWSSCLLCPSL*AVALGS Trigger: GGAGCCCAGGGCTACAGCCCAAAGAGAGGGACAGAG...CAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCACGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | AGGACATCAGTGCTGAGTCGGGGCTGGGGCTACACAGCACCCACCTCCCATTTCTTGGGCTCTGGGCTCTaGACCCAGGGGTCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RTSVLSRGWGYTAPTSHFLGSGL*TQGSQC Trigger: ACACTGTGACCCCTGGGTGCAGAGCCCAGAGCCCAA...GAAATGGGAGGTGGGTGCTGTGTAGCCCCAGCCCCGACTCAGCACTGATGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCCTAGCATTCACCCTCTaGCTCTCACACTTGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PELERAARLTVSAWGMHALAFTL*LSHLVT Trigger: TGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAG...GGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGCTCAGGGAAAAGCTGTGTTaGCTCTGCCTCTACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VLARLAAPRERSWSSCLLREKLC*LCLYSA Trigger: AGCACTGTAGAGGCAGAGGCAACACAGCTTTTCCCT...GAGCAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTGGTCACAGAACAGACTaGAGTCTCATTGCTCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CAGRSIPESCAERRLAWTGHRTD*SLIARC Trigger: ACAGCGAGCAATGAGACTCCAGTCTGTTCTGTGACC...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCTGCTGGACCCTGTGCTGGTCACAGAACAGACTaGAGTCTCATTGCTCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QQGSLSLPGACMPAGPCAGHRTD*SLIARC Trigger: ACAGCGAGCAATGAGACTCCAGTCTGTTCTGTGACC...AGCACAGGGTCCAGCAGGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTTCTGCCTCTCACACTTaGTCACAGAACAGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: CAGRSIPESCAERRLAWTSASHT*SQNRLE Trigger: CTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGA...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAACATCCACAGTTGAGCAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCCTCTGTCCCTCTCTTTaGGCTGTAGCCCTGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SLTSTVEQQGWSLAVDWALCPSL*AVALGS Trigger: GGAGCCCAGGGCTACAGCCCAAAGAGAGGGACAGAG...GGCCCAATCTACAGCCAGACTCCAGCCCTGCTGCTCAACTGTGGATGTTAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR CAA 90 bp | TCCCTCTCTTTGGGCTGTAGCCCTGGGCTCCTTGGGCTGGTTTCTTaGTCAATGAGAAGTGAGGCCTGTGCTGGCACCGGTGCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: SLSLGCSPGLLGLVS*SMRSEACAGTGAVI Trigger: AATGACAGCACCGGTGCCAGCACAGGCCTCACTTCTCATTGACAAAGAAACCAGCCCAAGGAGCCCAGGGCTACAGCCCAAAGAGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGCCAGGGAATATTTGTTGGGGAAACGTGCTAGCCAGGCTGGCTGCCCCTCTAGCATTCACCCTCTaGCTCTCACACTTGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: VWPGNICWGNVLARLAAPLAFTL*LSHLVT Trigger: TGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAG...AGGGGCAGCCAGCCTGGCTAGCACGTTTCCCCAACAAATATTCCCTGGCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTTGCTACGTTGGGCTCTaGGCTCTGCACCCAGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSCYVGL*ALHPGV Trigger: GACCCCTGGGTGCAGAGCCCAGAGCCCAACGTAGCA...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTCAAGGGCCCCTGAGCTaGAGAGGGCAGCAAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSQGPLS*RGQQGS Trigger: TGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTG...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGATTGGGCTCTGGGCTCTaGACCCAGGGGTCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QVFTDKDEPQHNCCGSVRLGSGL*TQGSQC Trigger: ACACTGTGACCCCTGGGTGCAGAGCCCAGAGCCCAA...TCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACCTAGAGAGAGGTCTTaGAGCAGCTGCCTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QVFTDKDEPQHNCCGSVRPRERS*SSCLLS Trigger: GCTGAGCAGGCAGCTGCTCCAAGACCTCTCTCTAGG...TCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR TCA 90 bp | TATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTGCCTGGACTACTTGCTaGCTTGCAGGCTGCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: YLQIKMSHSITAVDQSDSAWTTC*LAGCCL Trigger: CAAACAGCAGCCTGCAAGTCAGCAAGTAGTCCAGGC...AGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGATCTGCCTCTCACACTTaGTCACAGAACAGACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QVFTDKDEPQHNCCGSVRSASHT*SQNRLE Trigger: CTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGA...TCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGAAATAGTTGGGGATTATaGCTTCAGCATTCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QVFTDKDEPQHNCCGSVRNSWGL*LQHSSS Trigger: ACTGGAAGAATGCTGAAGCCATAATCCCCAACTATT...TCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR CCA 72 bp | GAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTaGGGCATGCATGCCTGCTGGACCCTGTGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ELERAARLTVSA*GMHACWTLCWQ Trigger: CTGCCAGCACAGGGTCCAGCAGGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | GTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGCTCGCTCTGTCCCTCTCTTaGGGCTGTAGCCCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VLARLAAPRERSWSSCLLALSLS*GCSPGL Trigger: GAGCCCAGGGCTACAGCCCAAAGAGAGGGACAGAGC...GAGCAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR CCA 72 bp | ACAGTGGGGTGTCTGGGCAGGTGCTACGTTGGGCTCTaGGCTCTGCACCCAGGGGTCACAGTGTCGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TVGCLGRCYVGL*ALHPGVTVSVS Trigger: AGAGACCGACACTGTGACCCCTGGGTGCAGAGCCCAGAGCCCAACGTAGCACCTGCCCAGACACCCCACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | CCAAGGAGGAACAACTTTGGGCTCTGTCCCTCTCTTTGGGCTGTAGCCCTGGGCTGGGCAGGTGCTACGTaGGGCTCTGGGCTCTGCACC | + |
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Preference number: 3 (lower is better) Translates to: PRRNNFGLCPSLWAVALGWAGAT*GSGLCT Trigger: GGTGCAGAGCCCAGAGCCCAACGTAGCACCTGCCCA...GCCCAGGGCTACAGCCCAAAGAGAGGGACAGAGCCCAAAGTTGTTCCTCCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | AGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGGGACTACTTGCTGACTaGCAGGCTGCTGTTTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RAPELERAARLTVSAWGMGLLAD*QAAVWQ Trigger: CTGCCAAACAGCAGCCTGCAAGTCAGCAAGTAGTCC...CATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR CCA 72 bp | CACCCAGGGGTCACAGTGTCGGTCTCTCTCCCACTCTaGCTGCGTGTGCACACCACACACCCTCTGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: HPGVTVSVSLPL*LRVHTTHPLCS Trigger: ACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGAGAGAGACCGACACTGTGACCCCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 72 bp | ACCCTGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTaGGAGACGGCTAGCCTGGACTACTTGCTGACTTGC | + |
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Preference number: 3 (lower is better) Translates to: TLCWQEHPGELC*ETASLDYLLTC Trigger: GCAAGTCAGCAAGTAGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 72 bp | CAGGGGTCACAGTGTCGGTCTCTCTCCCACTCTGGCTaGGTGTGCACACCACACACCCTCTGTGCAGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QGSQCRSLSHSG*VCTPHTLCAVR Trigger: TCTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGAGAGAGACCGACACTGTGACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | AGGACAAGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGCTCTGCCTCTCACACTaGGTCACAGAACAGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: RTRAPELERAARLTVSAWLCLSH*VTEQTG Trigger: TCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAG...CCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | AACGTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGGTAGCCCTGGGCTCCTaGGGCTGGTTTCTTTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: NVLARLAAPRERSWSSCLVALGS*GWFLCQ Trigger: TTGACAAAGAAACCAGCCCAAGGAGCCCAGGGCTAC...CAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCACGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR GCA 72 bp | CCACTCTGGCTGCGTGTGCACACCACACACCCTCTGTaGAGTGAGAGGCTCCTCTCTAGCATTCACCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PLWLRVHTTHPL*SERLLSSIHPL Trigger: CAGAGGGTGAATGCTAGAGAGGAGCCTCTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | AGGACAAGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGCTTGGGCTGGTTTCTTaGTCAATGAGAAGTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RTRAPELERAARLTVSAWLGLVS*SMRSEA Trigger: GGCCTCACTTCTCATTGACAAAGAAACCAGCCCAAG...CCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | AACGTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGCTTGGGCTGGTTTCTTaGTCAATGAGAAGTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NVLARLAAPRERSWSSCLLGLVS*SMRSEA Trigger: GGCCTCACTTCTCATTGACAAAGAAACCAGCCCAAG...CAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCACGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR TCA 72 bp | CAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCAGCTaGGTACCTGGGTGTCAGCCAAGGGAAATAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QQGWSLAVDWAS*VPGCQPREIVG Trigger: CCCAACTATTTCCCTTGGCTGACACCCAGGTACTCAGCTGGCCCAATCTACAGCCAGACTCCAGCCCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCTCTTTGGGCTGTAGCCCTGGGCTCCTTGGGCTGGTTTCTTTGTCAATGCAGACTGGAGTCTCATaGCTCGCTGTGCAGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSLGCSPGLLGLVSLSMQTGVS*LAVQSG Trigger: CCCACTCTGCACAGCGAGCAATGAGACTCCAGTCTG...CATTGACAAAGAAACCAGCCCAAGGAGCCCAGGGCTACAGCCCAAAGAGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAACATCCACAGTTGAGCAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCCAGACTGGAGTCTCATaGCTCGCTGTGCAGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSTVEQQGWSLAVDWAQTGVS*LAVQSG Trigger: CCCACTCTGCACAGCGAGCAATGAGACTCCAGTCTG...GGCCCAATCTACAGCCAGACTCCAGCCCTGCTGCTCAACTGTGGATGTTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR CCA 72 bp | CACCCTCTGCCTCTCACACTTGGTCACAGAACAGACTaGAGTCTCATTGCTCGCTGTGCAGAGTGGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPLPLTLGHRTD*SLIARCAEWAV Trigger: CACAGCCCACTCTGCACAGCGAGCAATGAGACTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR CCA 72 bp | CCAAGGAGGAACAACTTTGGGCTCTGTCCCTCTCTTTaGGCTGTAGCCCTGGGCTCCTTGGGCTGGTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRRNNFGLCPSL*AVALGSLGWFL Trigger: AAGAAACCAGCCCAAGGAGCCCAGGGCTACAGCCCAAAGAGAGGGACAGAGCCCAAAGTTGTTCCTCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR TCA 72 bp | TGGGCTCCTTGGGCTGGTTTCTTTGTCAATGAGAAGTaGGGCCTGTGCTGGCACCGGTGCTGTCATTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: WAPWAGFFVNEK*GLCWHRCCHSL Trigger: CAAGGAATGACAGCACCGGTGCCAGCACAGGCCTCACTTCTCATTGACAAAGAAACCAGCCCAAGGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAACATCCACAGTTGAGCAGCAGGGCTGGAGTCTGGCTGTAGATTGGGCCCTCTGCCTCTCACACTaGGTCACAGAACAGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLTSTVEQQGWSLAVDWALCLSH*VTEQTG Trigger: TCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAG...GGCCCAATCTACAGCCAGACTCCAGCCCTGCTGCTCAACTGTGGATGTTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCACATTCCTGAGCACTGACAATGTGGAGCCCTCACCACCCCCATCTTACGTAGCCCTGGGCTCCTaGGGCTGGTTTCTTTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QFTFLSTDNVEPSPPPSYVALGS*GWFLCQ Trigger: TTGACAAAGAAACCAGCCCAAGGAGCCCAGGGCTAC...GTAAGATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR GCA 72 bp | TGTGCAGTGAGAGGCTCCTCTCTAGCATTCACCCTCTaGCTCTCACACTTGGTCACAGAACAGACTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CAVRGSSLAFTL*LSHLVTEQTGV Trigger: GACTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAGAGAGGAGCCTCTCACTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR CCA 72 bp | CTGGAGTCTGGCTGTAGATTGGGCCAGCTGAGTACCTaGGTGTCAGCCAAGGGAAATAGTTGGGGATTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LESGCRLGQLST*VSAKGNSWGLW Trigger: CCATAATCCCCAACTATTTCCCTTGGCTGACACCCAGGTACTCAGCTGGCCCAATCTACAGCCAGACTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR TCA 72 bp | GGATTATGGCTTCAGCATTCTTCCAGTTCACATTCCTaGGCACTGACAATGTGGAGCCCTCACCACCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLWLQHSSSSHS*ALTMWSPHHPH Trigger: ATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTGGAAGAATGCTGAAGCCATAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTGGACTACTTGCTGACTaGCAGGCTGCTGTTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSGLLAD*QAAVWQ Trigger: CTGCCAAACAGCAGCCTGCAAGTCAGCAAGTAGTCC...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR CCA 72 bp | CAGCTGAGTACCTGGGTGTCAGCCAAGGGAAATAGTTaGGGATTATGGCTTCAGCATTCTTCCAGTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QLSTWVSAKGNS*GLWLQHSSSSH Trigger: ATGTGAACTGGAAGAATGCTGAAGCCATAATCCCCAACTATTTCCCTTGGCTGACACCCAGGTACTCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACCACCTCCCATTTCTTaGGCTGTAGAGGGGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QVFTDKDEPQHNCCGSVRPPPIS*AVEGVS Trigger: ACTTACCCCCTCTACAGCCAAAGAAATGGGAGGTGG...TCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR GCA 72 bp | CAAGTATTTACAGATAAAGATGAGCCACAGCATAACTaGTGTGGATCAGTCAGACTCTTCAGTGGCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: QVFTDKDEPQHN*CGSVRLFSGHI Trigger: GATGTGGCCACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCCAGGCTCCGGAGGGCTaGCTGGGAACCTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PELERAARLTVSAWGMHAQAPEG*LGTSSP Trigger: AGGGCTGGAGGTTCCCAGCCAGCCCTCCGGAGCCTG...GGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGCATGCCCTCCGGAGGGCTGGCTaGGAACCTCCAGCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PELERAARLTVSAWGMHALRRAG*EPPALS Trigger: GGAAAGGGCTGGAGGTTCCCAGCCAGCCCTCCGGAG...GGCATGCATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR TCA 90 bp | AGGACAAGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGCTTCACCACCGGGGGTaGTGTTACAGGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRAPELERAARLTVSAWLHHRG*CYRCRP Trigger: GGGCCTACACCTGTAACATCACCCCCGGTGGTGAAG...CCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTAGCAGCAGCACCTGTTaGAGGGAGTGCCACGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CAGRSIPESCAERRLAWTSSSTC*RECHGS Trigger: CGACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCT...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | AGGACATCAGTGCTGAGTCGGGGCTGGGGCTACACAGCACCCACCTCCCATTTCGGCTGGGCCAGACAGTaGCCTCCATTGAGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSVLSRGWGYTAPTSHFGWARQ*PPLSAA Trigger: TGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCC...GAAATGGGAGGTGGGTGCTGTGTAGCCCCAGCCCCGACTCAGCACTGATGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCAGRSIPESCAERRLAWSWGIS*RRMAMV Trigger: CACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...CCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTGCAGGAGGATGGCCATaGTGGTCAGAAGCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGRSIPESCAERRLAWTAGGWP*WSEARS Trigger: AGATCGGGCTTCTGACCACCATGGCCATCCTCCTGC...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGAAGTCACCCACCTCATaGGGGATCTCATGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRAPELERAARLTVSAWKSPTS*GISCRR Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGGGTGACTT...CCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCTTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCCAGGGAATATTTGTTGGGGAAACGTGCTAGCCAGGCTGGCTGCCCCTTCTTTGCTGGGGGCCTaGCTGGGGTCCTCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWPGNICWGNVLARLAAPSLLGA*LGSSLL Trigger: CAGCAAGGAGGACCCCAGCCAGGCCCCCAGCAAAGA...AGGGGCAGCCAGCCTGGCTAGCACGTTTCCCCAACAAATATTCCCTGGCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR TCA 90 bp | GTGTGGCCAGGGAATATTTGTTGGGGAAACGTGCTAGCCAGGCTGGCTGCCCCTCACCTAAGGCAAAGCTaGGCAGCTGCCTCAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VWPGNICWGNVLARLAAPHLRQS*AAASVA Trigger: GGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTG...AGGGGCAGCCAGCCTGGCTAGCACGTTTCCCCAACAAATATTCCCTGGCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCTCCCACTCTGGCTGCGTGTGCACACCACACACCCTCTGTGCAGTGAGGCAGGAGGATGGCCATaGTGGTCAGAAGCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLPLWLRVHTTHPLCSEAGGWP*WSEARS Trigger: AGATCGGGCTTCTGACCACCATGGCCATCCTCCTGC...CTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGAGAGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR TCA 90 bp | AGGACATCAGTGCTGAGTCGGGGCTGGGGCTACACAGCACCCACCTCCCATTTCGCCACAGCCAGCCCATaGGTGAAGTTGTCTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSVLSRGWGYTAPTSHFATASP*VKLSMV Trigger: CACCATAGACAACTTCACTCATGGGCTGGCTGTGGC...GAAATGGGAGGTGGGTGCTGTGTAGCCCCAGCCCCGACTCAGCACTGATGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR TCA 90 bp | TCCCACTCTGGCTGCGTGTGCACACCACACACCCTCTGTGCAGTGAGAGGCTCCGGTCCTCCTTGCTGTTaGGGAACATCTTCTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SHSGCVCTPHTLCAVRGSGPPCC*GTSSPT Trigger: CGTTGGAGAAGATGTTCCTCAACAGCAAGGAGGACC...GGAGCCTCTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR TCA 90 bp | CAGTTCACATTCCTGAGCACTGACAATGTGGAGCCCTCACCACCCCCATCTTACGACAGTGGCCTCCATTaGGCGCGGCAGCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFTFLSTDNVEPSPPPSYDSGLH*ARQQWG Trigger: ACCCCACTGCTGCCGCGCTCAATGGAGGCCACTGTC...GTAAGATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR CCA 90 bp | AACGTGCTAGCCAGGCTGGCTGCCCCTAGAGAGAGGTCTTGGAGCAGCTGCCTGGGAGGATGGCCATGGTaGTCAGAAGCCCGATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVLARLAAPRERSWSSCLGGWPW*SEARSF Trigger: AAAAGATCGGGCTTCTGACCACCATGGCCATCCTCC...CAGGCAGCTGCTCCAAGACCTCTCTCTAGGGGCAGCCAGCCTGGCTAGCACGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCTCCCACTCTGGCTGCGTGTGCACACCACACACCCTCTGTGCAGTGAGAGGAAGAGGAGCCTTTaGCCTGCCATACCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLPLWLRVHTTHPLCSERKRSL*PAIPQP Trigger: TGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCT...CTCACTGCACAGAGGGTGTGTGGTGTGCACACGCAGCCAGAGTGGGAGAGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTGAAGCCCGATCTTTTTaGTCACAAGGAAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CAGRSIPESCAERRLAWTEARSF*SQGSWQ Trigger: CTGCCAGCTTCCTTGTGAGCAAAAAGATCGGGCTTC...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGGAGGAACAACTTTGGGCTCTGTCCCTCTCTTTGGGCTGTAGCCCTGGGCAAGTCACCCACCTCATaGGGGATCTCATGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRNNFGLCPSLWAVALGKSPTS*GISCRR Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGGGTGACTT...GCCCAGGGCTACAGCCCAAAGAGAGGGACAGAGCCCAAAGTTGTTCCTCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| 3UTR CAA 72 bp | TTGGGCTGTAGCCCTGGGCTCCTTGGGCTGGTTTCTTaGTCAATGAGAAGTGAGGCCTGTGCTGGCACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGCSPGLLGLVS*SMRSEACAGTG Trigger: ACCGGTGCCAGCACAGGCCTCACTTCTCATTGACAAAGAAACCAGCCCAAGGAGCCCAGGGCTACAGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR GCA 90 bp | GTAGGAAGGGTAAGGAAAATGGACAGCAGGGAAAAGCTGTGTTGCCTCTGCCTCGCAAAGCTGAGCAGCTaGCTCAGTCGCCAGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGRVRKMDSREKLCCLCLAKLSS*LSRQAP Trigger: CGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGC...GAGGCAGAGGCAACACAGCTTTTCCCTGCTGTCCATTTTCCTTACCCTTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR TCA 90 bp | CTAGCATTCACCCTCTGCCTCTCACACTTGGTCACAGAACAGACTGGAGTCTCACCAGGGCAAGGACAGTaGGGAAGAGGAGCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFTLCLSHLVTEQTGVSPGQGQ*GRGAFG Trigger: GCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGG...TGAGACTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR GCA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTCAGGCGACAGGCAGCTaGAGCCCCCAGGCTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSQATGS*SPQAPE Trigger: CTCCGGAGCCTGGGGGCTGCAGCTGCCTGTCGCCTG...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
||
| CDS-3UTR CCA 90 bp | AATGGACAGCAGGGAAAAGCTGTGTTGCCTCTGCCTCTACAGTGCTTGGGGCCTGGGACTGTGTACAGATaGCAAAGCAGGCCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGQQGKAVLPLPLQCLGPGTVYR*QSRPPE Trigger: TTCTGGGGGCCTGCTTTGCCATCTGTACACAGTCCC...AGGCCCCAAGCACTGTAGAGGCAGAGGCAACACAGCTTTTCCCTGCTGTCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTCACATTCCTGAGCACTGACAATGTGGAGCCCTCACCACCCCCATCTTACGCCACAGCCAGCCCATaGGTGAAGTTGTCTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFTFLSTDNVEPSPPPSYATASP*VKLSMV Trigger: CACCATAGACAACTTCACTCATGGGCTGGCTGTGGC...GTAAGATGGGGGTGGTGAGGGCTCCACATTGTCAGTGCTCAGGAATGTGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | CTAGCATTCACCCTCTGCCTCTCACACTTGGTCACAGAACAGACTGGAGTCTCATCTCATGCAGGAGGATaGCCATGGTGGTCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAFTLCLSHLVTEQTGVSSHAGG*PWWSEA Trigger: GGCTTCTGACCACCATGGCCATCCTCCTGCATGAGA...TGAGACTCCAGTCTGTTCTGTGACCAAGTGTGAGAGGCAGAGGGTGAATGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR GCA 90 bp | CACCCACCTCCCATTTCTTTGGCTGTAGAGGGGGTAAGTAGGAAGGGTAAGGAAGAAGCCCGATCTTTTTaGTCACAAGGAAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPPPISLAVEGVSRKGKEEARSF*SQGSWQ Trigger: CTGCCAGCTTCCTTGTGAGCAAAAAGATCGGGCTTC...TTCCTTACCCTTCCTACTTACCCCCTCTACAGCCAAAGAAATGGGAGGTGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR GCA 90 bp | CATAACTGCTGTGGATCAGTCAGACTCTTCAGTGGCCACATCTCTAACATCCACTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNCCGSVRLFSGHISNIHSWGIS*RRMAMV Trigger: CACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...GTGGATGTTAGAGATGTGGCCACTGAAGAGTCTGACTGATCCACAGCAGTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTGGGACTGTGTACAGATaGCAAAGCAGGCCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSGTVYR*QSRPPE Trigger: TTCTGGGGGCCTGCTTTGCCATCTGTACACAGTCCC...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTGGAGGATGGCCATGGTaGTCAGAAGCCCGATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSGGWPW*SEARSF Trigger: AAAAGATCGGGCTTCTGACCACCATGGCCATCCTCC...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
||
| CDS GCA 90 bp | GCCACTGACTTTGAGGTTCCGGACCACGGCTCTCAGGCCGGGCTCTaGAGCCGGCTGGGCCAGACAGTGGCCTCCATTGAGCGCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATDFEVPDHGSQAGL*SRLGQTVASIERGS Trigger: GCTGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGAGCCGTGGTCCGGAACCTCAAAGTCAGTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 |
||
| CDS CCA 90 bp | TTGAGGTTCCGGACCACGGCTCTCAGGCCGGGCTCTGCAGCCGGCTaGGCCAGACAGTGGCCTCCATTGAGCGCGGCAGCAGTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRFRTTALRPGSAAG*ARQWPPLSAAAVGS Trigger: AGACCCCACTGCTGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGAGCCGTGGTCCGGAACCTCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 |
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| CDS-3UTR CAA 90 bp | AGGGCCCCTGAGCTGGAGAGGGCAGCAAGGCTCACTGTCTCTGCCTGGGGCATGGAGCAGCAGCACCTGTaGCAGGGAGTGCCACGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RAPELERAARLTVSAWGMEQQHL*QGVPRV Trigger: GACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCTC...CATGCCCCAGGCAGAGACAGTGAGCCTTGCTGCCCTCTCCAGCTCAGGGGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| CDS GCA 90 bp | CAGGAGCTCCAGGGCAAGGACAGTGAGGAAGAGGAGCCTTTGGCCTaGCATACCACAGCCAGGGCAGGGACATCCAGGCATGCCGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: QELQGKDSEEEEPLA*HTTARAGTSRHAGR Trigger: GCGCCCGGCATGCCTGGATGTCCCTGCCCTGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGGAGCTCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153367.2 |
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| CDS TCA 90 bp | GCTGGGAACCTCCAGCCCTTTCCAGGAGCTCCAGGGCAAGGACAGTaGGGAAGAGGAGCCTTTGGCCTGCCATACCACAGCCAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGNLQPFPGAPGQGQ*GRGAFGLPYHSQGR Trigger: CCTGCCCTGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGGAGCTCCTGGAAAGGGCTGGAGGTTCCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS GCA 90 bp | CAGACTCTGCCCTTCACCACCTGCAGGGGGAGCACTAACAGGCCATaGCAAGCCAGTGGCGGGGGTGATGTTACAGGTGTAGGCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: QTLPFTTCRGSTNRP*QASGGGDVTGVGPR Trigger: GCGTGGGCCTACACCTGTAACATCACCCCCGCCACTGGCTTGGCATGGCCTGTTAGTGCTCCCCCTGCAGGTGGTGAAGGGCAGAGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111436.3 |
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| CDS TCA 90 bp | CCAGTTGTTGCTGTCGCTGCAGACTCTGCCCTTCACCACCGGGGGTaGTGTTACAGGTGTAGGCCCACGCCTCCGGCAGCAGGTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PVVAVAADSALHHRG*CYRCRPTPPAAGAE Trigger: TTCTGCACCTGCTGCCGGAGGCGTGGGCCTACACCTGTAACATCACCCCCGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
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| CDS GCA 90 bp | GCCAGGAAGGTCAGGAAGCCAGCGATGACCCATAGCCCCAGTTGTTaGTGTCGCTGCAGACTCTGCCCTTCACCACCTGCAGGGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ARKVRKPAMTHSPSC*CRCRLCPSPPAGGA Trigger: TGCTCCCCCTGCAGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCTGACCTTCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111436.3 |
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| CDS CCA 90 bp | CTTTCCAGGAGCTCCAGGGCAAGGACAGTGAGGAAGAGGAGCCTTTaGCCTGCCATACCACAGCCAGGGCAGGGACATCCAGGCATGCCG | + |
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Preference number: 5 (lower is better) Translates to: LSRSSRARTVRKRSL*PAIPQPGQGHPGMP Trigger: CGGCATGCCTGGATGTCCCTGCCCTGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGGAGCTCCTGGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153367.2 |
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| CDS GCA 90 bp | GTCAGGAAGCCAGCGATGACCCATAGCCCCAGTTGTTGCTGTCGCTaGAGACTCTGCCCTTCACCACCTGCAGGGGGAGCACTAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: VRKPAMTHSPSCCCR*RLCPSPPAGGALTG Trigger: GCCTGTTAGTGCTCCCCCTGCAGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111436.3 |
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| CDS GCA 90 bp | AGAAACACGTTGCCCAGGAGTCCACCTAAGGCAAAGCTGAGCAGCTaGCTCAGTCGCCAGGCTCCGGCTTCTGACTGTAACAGGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RNTLPRSPPKAKLSS*LSRQAPASDCNRVP Trigger: GGGGACCCTGTTACAGTCAGAAGCCGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTGGACTCCTGGGCAACGTGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS GCA 90 bp | GCCAGGAAGGTCAGGAAGCCAGCGATGACCCATAGCCCCAGTTGTTaGTGTCGCTGCAGACTCTGCCCTTCACCACCGGGGGTGATGTTA | + |
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Preference number: 5 (lower is better) Translates to: ARKVRKPAMTHSPSC*CRCRLCPSPPGVML Trigger: TAACATCACCCCCGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCTGACCTTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
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| CDS TCA 90 bp | GCAGGTGCAGAAACACGTTGCCCAGGAGTCCACCTAAGGCAAAGCTaGGCAGCTGCCTCAGTCGCCAGGCTCCGGCTTCTGACTGTAACA | + |
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Preference number: 5 (lower is better) Translates to: AGAETRCPGVHLRQS*AAASVARLRLLTVT Trigger: TGTTACAGTCAGAAGCCGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTGGACTCCTGGGCAACGTGTTTCTGCACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS-3UTR CAA 90 bp | TGTGCTGGCAGGAGCATCCCGGAGAGCTGTGCTGAGAGACGGCTAGCCTGGACTAGAAGCCCGATCTTTTaGCTCACAAGGAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: CAGRSIPESCAERRLAWTRSPIF*LTRKLA Trigger: TGCCAGCTTCCTTGTGAGCAAAAAGATCGGGCTTCT...AGTCCAGGCTAGCCGTCTCTCAGCACAGCTCTCCGGGATGCTCCTGCCAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| CDS TCA 90 bp | CAGGTAACACATTCACCAGGGCGATATAGAGAAAGCCTCCCGAGGTaGAGGGCAGGATCCAGACCACCGTCTCCTCTACTCCTTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: QVTHSPGRYRESLPR*RAGSRPPSPLLLWG Trigger: CCCCCAAAGGAGTAGAGGAGACGGTGGTCTGGATCCTGCCCTTCACCTCGGGAGGCTTTCTCTATATCGCCCTGGTGAATGTGTTACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS GCA 90 bp | ATCACCAGAACACCGGAGCAGAGCAGCAGCACCTGTTGCAGGGAGTaGCACGGGTCGTCTTCTTCCAAGAGGTCAGGTAACACATTCACC | + |
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Preference number: 5 (lower is better) Translates to: ITRTPEQSSSTCCRE*HGSSSSKRSGNTFT Trigger: GGTGAATGTGTTACCTGACCTCTTGGAAGAAGACGACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCTCTGCTCCGGTGTTCTGGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS-3UTR CAA 90 bp | AATGGACAGCAGGGAAAAGCTGTGTTGCCTCTGCCTCTACAGTGCTTGGGGCCTGTCTCCTCTACTCCTTaGGGGGACTGTGTACAGATG | + |
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Preference number: 5 (lower is better) Translates to: NGQQGKAVLPLPLQCLGPVSSTP*GDCVQM Trigger: CATCTGTACACAGTCCCCCAAAGGAGTAGAGGAGAC...AGGCCCCAAGCACTGTAGAGGCAGAGGCAACACAGCTTTTCCCTGCTGTCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| CDS-3UTR CAA 90 bp | GTTTCTTTGTCAATGAGAAGTGAGGCCTGTGCTGGCACCGGTGCTGTCATTCCTGTCTCCTCTACTCCTTaGGGGGACTGTGTACAGATG | + |
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Preference number: 5 (lower is better) Translates to: VSLSMRSEACAGTGAVIPVSSTP*GDCVQM Trigger: CATCTGTACACAGTCCCCCAAAGGAGTAGAGGAGAC...AGGAATGACAGCACCGGTGCCAGCACAGGCCTCACTTCTCATTGACAAAGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| CDS-3UTR CAA 90 bp | CACCCACCTCCCATTTCTTTGGCTGTAGAGGGGGTAAGTAGGAAGGGTAAGGAAAGAAGCCCGATCTTTTaGCTCACAAGGAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: HPPPISLAVEGVSRKGKERSPIF*LTRKLA Trigger: TGCCAGCTTCCTTGTGAGCAAAAAGATCGGGCTTCT...TTCCTTACCCTTCCTACTTACCCCCTCTACAGCCAAAGAAATGGGAGGTGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 |
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| CDS-3UTR CAA 90 bp | CATAACTGCTGTGGATCAGTCAGACTCTTCAGTGGCCACATCTCTAACATCCACTGGCTGGGGTCCTCCTaGCTGTTGAGGAACATCTTC | + |
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Preference number: 5 (lower is better) Translates to: HNCCGSVRLFSGHISNIHWLGSS*LLRNIF Trigger: GAAGATGTTCCTCAACAGCAAGGAGGACCCCAGCCA...GTGGATGTTAGAGATGTGGCCACTGAAGAGTCTGACTGATCCACAGCAGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
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| CDS-3UTR CAA 90 bp | TATTTACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTGAGGAAGAGGAGCCTTaGGCCTGCCATACCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: YLQIKMSHSITAVDQSDSEEEEP*ACHTTA Trigger: GGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTC...AGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGTAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
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| CDS-3UTR CAA 90 bp | ACAGATAAAGATGAGCCACAGCATAACTGCTGTGGATCAGTCAGACTCTTCAGTAGGTGCAGAAACACGTaGCCCAGGAGTCCACCTAAG | + |
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Preference number: 5 (lower is better) Translates to: TDKDEPQHNCCGSVRLFSRCRNT*PRSPPK Trigger: CTTAGGTGGACTCCTGGGCAACGTGTTTCTGCACCT...ACTGAAGAGTCTGACTGATCCACAGCAGTTATGCTGTGGCTCATCTTTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073575.12 |
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| CDS CCA 72 bp | GCGACAGGCAGCTGCAGCCCCCAGGCTCCGGAGGGCTaGCTGGGAACCTCCAGCCCTTTCCAGGAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ATGSCSPQAPEG*LGTSSPFQELQ Trigger: CTGGAGCTCCTGGAAAGGGCTGGAGGTTCCCAGCCAGCCCTCCGGAGCCTGGGGGCTGCAGCTGCCTGTCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS GCA 72 bp | TTTGAGGTTCCGGACCACGGCTCTCAGGCCGGGCTCTaGAGCCGGCTGGGCCAGACAGTGGCCTCCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: FEVPDHGSQAGL*SRLGQTVASIE Trigger: CTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGAGCCGTGGTCCGGAACCTCAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 |
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| CDS CAA 90 bp | CCTTTCCAGGAGCTCCAGGGCAAGGACAGTGAGGAAGAGGAGCCTTaGGCCTGCCATACCACAGCCAGGGCAGGGACATCCAGGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: PFQELQGKDSEEEEP*ACHTTARAGTSRHA Trigger: GGCATGCCTGGATGTCCCTGCCCTGGCTGTGGTATGGCAGGCCAAAGGCTCCTCTTCCTCACTGTCCTTGCCCTGGAGCTCCTGGAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153367.2 |
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| CDS GCA 72 bp | CCAGCGATGACCCATAGCCCCAGTTGTTGCTGTCGCTaGAGACTCTGCCCTTCACCACCTGCAGGGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PAMTHSPSCCCR*RLCPSPPAGGA Trigger: TGCTCCCCCTGCAGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111436.3 |
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| CDS TCA 72 bp | GAAACACGTTGCCCAGGAGTCCACCTAAGGCAAAGCTaGGCAGCTGCCTCAGTCGCCAGGCTCCGGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ETRCPGVHLRQS*AAASVARLRLL Trigger: CAGAAGCCGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTGGACTCCTGGGCAACGTGTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS GCA 72 bp | ATCACCAGAACACCGGAGCAGAGCAGCAGCACCTGTTaGAGGGAGTGCCACGGGTCGTCTTCTTCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ITRTPEQSSSTC*RECHGSSSSKR Trigger: CCTCTTGGAAGAAGACGACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCTCTGCTCCGGTGTTCTGGTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS GCA 72 bp | TTGCCCAGGAGTCCACCTAAGGCAAAGCTGAGCAGCTaGCTCAGTCGCCAGGCTCCGGCTTCTGACTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LPRSPPKAKLSS*LSRQAPASDCN Trigger: GTTACAGTCAGAAGCCGGAGCCTGGCGACTGAGGCAGCTGCTCAGCTTTGCCTTAGGTGGACTCCTGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 ENSMUST00000153367.2 |
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| CDS GCA 72 bp | GTCAGGAAGCCAGCGATGACCCATAGCCCCAGTTGTTaGTGTCGCTGCAGACTCTGCCCTTCACCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VRKPAMTHSPSC*CRCRLCPSPPA Trigger: TGCAGGTGGTGAAGGGCAGAGTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111436.3 |
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| CDS CCA 72 bp | AGGGCAGGATCCAGACCACCGTCTCCTCTACTCCTTTaGGGGACTGTGTACAGATGGCAAAGCAGGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RAGSRPPSPLLL*GTVYRWQSRPP Trigger: TGGGGGCCTGCTTTGCCATCTGTACACAGTCCCCCAAAGGAGTAGAGGAGACGGTGGTCTGGATCCTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS CAA 72 bp | CATCACCAGAACACCGGAGCAGAGCAGCAGCACCTGTaGCAGGGAGTGCCACGGGTCGTCTTCTTCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HHQNTGAEQQHL*QGVPRVVFFQE Trigger: CTCTTGGAAGAAGACGACCCGTGGCACTCCCTGCAACAGGTGCTGCTGCTCTGCTCCGGTGTTCTGGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS TCA 72 bp | TCTTCTCCAACGCCAGGAAGGTCAGGAAGCCAGCGATaGCCCATAGCCCCAGTTGTTGCTGTCGCTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SSPTPGRSGSQR*PIAPVVAVAAD Trigger: GTCTGCAGCGACAGCAACAACTGGGGCTATGGGTCATCGCTGGCTTCCTGACCTTCCTGGCGTTGGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073575.12 ENSMUST00000111436.3 |
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| CDS TCA 72 bp | CATTCACCAGGGCGATATAGAGAAAGCCTCCCGAGGTaGAGGGCAGGATCCAGACCACCGTCTCCTCTACTC | + |
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Preference number: 6 (lower is better) Translates to: HSPGRYRESLPR*RAGSRPPSPLL Trigger: GAGTAGAGGAGACGGTGGTCTGGATCCTGCCCTTCACCTCGGGAGGCTTTCTCTATATCGCCCTGGTGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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| CDS CCA 72 bp | CCTCATGGGGGATCTCATGCAGGAGGATGGCCATGGTaGTCAGAAGCCCGATCTTTTTGCTCACAAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PHGGSHAGGWPW*SEARSFCSQGS Trigger: GCTTCCTTGTGAGCAAAAAGATCGGGCTTCTGACCACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000073575.12 ENSMUST00000079976.10 ENSMUST00000111436.3 |
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