Pregenerated sensors for SLC39A10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025986Ensembl transcript IDs: ENSMUST00000027131.6
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAAATCTACAGAACCTGTAAATAGTGCAGGCCACTGGATTCTCTaGGCGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGA | + |
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Preference number: 1 (lower is better) Translates to: LKSTEPVNSAGHWIL*ATCIQYKEQRQAAR Trigger: TCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCGCTCAGAGAATCCAGTGGCCTGCACTATTTACAGGTTCTGTAGATTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 90 bp | AGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAATaGGGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: STPAPFSKVAQRAKQ*GEVMTVIGMPSAEN Trigger: GTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACCTCATTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 90 bp | AAAATAGAGCTAGCTGCACACGGTTCAGACATTTGCCTGTATAAATaGAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGAC | + |
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Preference number: 1 (lower is better) Translates to: KIELAAHGSDICLYK*RVGGMGCKQLYAHD Trigger: GTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACAGGCAAATGTCTGAACCGTGTGCAGCTAGCTCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 90 bp | CACACGGTTCAGACATTTGCCTGTATAAATGAAGAGTGGGTGGCATaGGATGTAAACAGCTGTATGCACATGACTAGTCTACAAGTTATG | + |
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Preference number: 1 (lower is better) Translates to: HTVQTFACINEEWVA*DVNSCMHMTSLQVM Trigger: CATAACTTGTAGACTAGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACAGGCAAATGTCTGAACCGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 90 bp | GAATGCAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTaGCAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGT | + |
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Preference number: 1 (lower is better) Translates to: ECNVVYTKIFMDVTW*QHHTSNIGDLQQAC Trigger: ACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 90 bp | AATCACAGCTGGTTGAATGCAATGTGGTATACACCAAAATCTTTATaGATGTCACATGGTGACAGCATCATACAAGTAATATTGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: NHSWLNAMWYTPKSL*MSHGDSIIQVILVT Trigger: GGTCACCAATATTACTTGTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTGCATTCAACCAGCTGTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 90 bp | CTGCATCTAGTTACTATAGTATTTCTAAGCATAATCACAGCTGGTTaGATGCAATGTGGTATACACCAAAATCTTTATGGATGTCACATG | + |
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Preference number: 1 (lower is better) Translates to: LHLVTIVFLSIITAG*MQCGIHQNLYGCHM Trigger: CATGTGACATCCATAAAGATTTTGGTGTATACCACATTGCATTCAACCAGCTGTGATTATGCTTAGAAATACTATAGTAACTAGATGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 90 bp | CACACTGCATCTAGTTACTATAGTATTTCTAAGCATAATCACAGCTaGTTGAATGCAATGTGGTATACACCAAAATCTTTATGGATGTCA | + |
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Preference number: 1 (lower is better) Translates to: HTASSYYSISKHNHS*LNAMWYTPKSLWMS Trigger: TGACATCCATAAAGATTTTGGTGTATACCACATTGCATTCAACCAGCTGTGATTATGCTTAGAAATACTATAGTAACTAGATGCAGTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGACATCACTGCCCCAGTaGTGTAAGAGCAGGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLTSLPQ*CKSRHP Trigger: TGGGTGCCTGCTCTTACACCACTGGGGCAGTGATGT...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCCCTGGTCGCATGTGTTaGCCTCAAATTTTTGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KLTALSTPAPFSKVAQRAPGRMC*PQIFVF Trigger: AAAAACAAAAATTTGAGGGCAACACATGCGACCAGG...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGAACACCAGTCTTTCGTaGTTAGGCTCAAATCTACAG | + |
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Preference number: 2 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLNTSLS*LGSNLQ Trigger: CTGTAGATTTGAGCCTAACCACGAAAGACTGGTGTT...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR TCA 90 bp | AAATGGAAAGGCCAGGGTTTGGCTCTTATGTGGTTTTTCCCAAGGGATATCCTGCTAGTCTACAAGTTATaGGTCACAATCAGACGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KWKGQGLALMWFFPRDILLVYKL*VTIRRN Trigger: GTTTCGTCTGATTGTGACTCATAACTTGTAGACTAG...CAGGATATCCCTTGGGAAAAACCACATAAGAGCCAAACCCTGGCCTTTCCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAAAGGGATATCCTGGCTaGCAAGCAGTTAAAATAGAG | + |
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Preference number: 2 (lower is better) Translates to: GEVMTVIGMPSAENLCAKKGYPG*QAVKIE Trigger: CTCTATTTTAACTGCTTGGCAGCCAGGATATCCCTT...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAGGTTTGGCTCTTATGTaGTTTTTCCCAAGGGATATC | + |
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Preference number: 2 (lower is better) Translates to: GEVMTVIGMPSAENLCAKGLALM*FFPRDI Trigger: GATATCCCTTGGGAAAAACCACATAAGAGCCAAACC...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGTACTGCAAGGAGGGCTaGGAAAGAGACAACTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSIIQVILVTSNKHVKIRYCKEG*ERDNCC Trigger: ACAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTA...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAATGTATAAATGAAGAGTaGGTGGCATGGGATGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: GEVMTVIGMPSAENLCAKCINEE*VAWDVN Trigger: GTTTACATCCCATGCCACCCACTCTTCATTTATACA...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACGGCATAACAGCTTTGTaGAGCATTTTAGAGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QCGIHQNLYGCHMVTASYGITAL*SILEWE Trigger: CTCCCACTCTAAAATGCTTCACAAAGCTGTTATGCC...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CAA 90 bp | GACCAAATAACCCTTGCTTATAACATATCAAAGAAATATTGGAGATaGACCTCTGACACCTGGTCGCATGTGTTGCCCTCAAATTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DQITLAYNISKKYWR*TSDTWSHVLPSNFC Trigger: ACAAAAATTTGAGGGCAACACATGCGACCAGGTGTCAGAGGTCAATCTCCAATATTTCTTTGATATGTTATAAGCAAGGGTTATTTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR GCA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACTTCAGTAGTTTAGGCTaGAAGTTTGAACACTATGCA | + |
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Preference number: 2 (lower is better) Translates to: QCGIHQNLYGCHMVTASYFSSLG*KFEHYA Trigger: TGCATAGTGTTCAAACTTGCAGCCTAAACTACTGAA...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR GCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGGCTCCGAGTTCCAAATaGCAAACTGGTAAAATAACA | + |
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Preference number: 2 (lower is better) Translates to: DSIIQVILVTSNKHVKIRAPSSK*QTGKIT Trigger: TGTTATTTTACCAGTTTGGCATTTGGAACTCGGAGC...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CAA 90 bp | AAATCTTTATGGATGTCACATGGTGACAGCATCATACAAGTAATATaGGTGACCTCCAACAAGCATGTTAAAATTAGGCTAGTCAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KSLWMSHGDSIIQVI*VTSNKHVKIRLVKL Trigger: TAGCTTGACTAGCCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTCACCATGTGACATCCATAAAGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR GCA 72 bp | AGCGACGTGCATACAGTACAAGGAACAGAGGCAAGCTaGACGAGCATTCTCGCAATCAACAGAGATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SDVHTVQGTEAS*TSILAINRDAG Trigger: CCCAGCATCTCTGTTGATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCCCCAGTGCTGAAAACTaGTGTGCAAAACCACTTACT | + |
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Preference number: 3 (lower is better) Translates to: KLTALSTPAPFSKVAQRAPSAEN*CAKPLT Trigger: AGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGG...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 72 bp | ACAGAACCTGTAAATAGTGCAGGCCACTGGATTCTCTaGGCGACGTGCATACAGTACAAGGAACAGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: TEPVNSAGHWIL*ATCIQYKEQRQ Trigger: TTGCCTCTGTTCCTTGTACTGTATGCACGTCGCTCAGAGAATCCAGTGGCCTGCACTATTTACAGGTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 72 bp | CTAGCTGCACACGGTTCAGACATTTGCCTGTATAAATaGAGAGTGGGTGGCATGGGATGTAAACAGCTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LAAHGSDICLYK*RVGGMGCKQLY Trigger: ATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACAGGCAAATGTCTGAACCGTGTGCAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 72 bp | CACACGGTTCAGACATTTGCCTGTATAAATGAAGAGTaGGTGGCATGGGATGTAAACAGCTGTATGCACATG | + |
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Preference number: 3 (lower is better) Translates to: HTVQTFACINEE*VAWDVNSCMHM Trigger: CATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACAGGCAAATGTCTGAACCGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 72 bp | TATTTAAAATGGAAAGGCCAGGGTTTGGCTCTTATGTaGTTTTTCCCAAGGGATATCCTGGCTGCCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: YLKWKGQGLALM*FFPRDILAAKQ Trigger: CTGCTTGGCAGCCAGGATATCCCTTGGGAAAAACCACATAAGAGCCAAACCCTGGCCTTTCCATTTTAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAACACCAGCAGTGTATCTaGGCACAAAATGATAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: GEVMTVIGMPSAENLCAKHQQCI*AQNDRS Trigger: ACTTCTATCATTTTGTGCCAAGATACACTGCTGGTG...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTCCCAGTCACTTGAAGTaGACAGCACTGAGCACACCA | + |
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Preference number: 3 (lower is better) Translates to: FWESSVSIRNIYKMTHHCPSHLK*TALSTP Trigger: TGGTGTGCTCAGTGCTGTCAACTTCAAGTGACTGGG...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 72 bp | CCCTTGCTTATAACATATCAAAGAAATATTGGAGATTaGCCTCTGACACCTGGTCGCATGTGTTGCCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: PLLITYQRNIGD*PLTPGRMCCPQ Trigger: TTGAGGGCAACACATGCGACCAGGTGTCAGAGGTCAATCTCCAATATTTCTTTGATATGTTATAAGCAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 72 bp | TTTAGAGTGGGAGTATATTCCCGCAGTTGTTTGAAATaGAGGAGATGTAATGCTGGAATGCACAACCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: FRVGVYSRSCLK*RRCNAGMHNPP Trigger: AGGAGGGTTGTGCATTCCAGCATTACATCTCCTTCATTTCAAACAACTGCGGGAATATACTCCCACTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTATAGGCATGGCAAACTaGGCTTTTACTACCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: FWESSVSIRNIYKMTHHCIGMAN*AFTTSH Trigger: GTGGCTGGTAGTAAAAGCCAAGTTTGCCATGCCTAT...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACACCTGGTCGCATGTGTaGCCCTCAAATTTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: QCGIHQNLYGCHMVTASYTWSHV*PSNFCF Trigger: AAAACAAAAATTTGAGGGCAACACATGCGACCAGGT...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGAAATATCCCAGTCACTaGAAGTTGACAGCACTGAGC | + |
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Preference number: 3 (lower is better) Translates to: DSIIQVILVTSNKHVKIRKYPSH*KLTALS Trigger: GCTCAGTGCTGTCAACTTCAAGTGACTGGGATATTT...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR TCA 72 bp | GTGGTATACACCAAAATCTTTATGGATGTCACATGGTaGCAGCATCATACAAGTAATATTGGTGACCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VVYTKIFMDVTW*QHHTSNIGDLQ Trigger: TTGGAGGTCACCAATATTACTTGTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 72 bp | CAAATAACCCTTGCTTATAACATATCAAAGAAATATTaGAGATTGACCTCTGACACCTGGTCGCATGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: QITLAYNISKKY*RLTSDTWSHVL Trigger: CAACACATGCGACCAGGTGTCAGAGGTCAATCTCCAATATTTCTTTGATATGTTATAAGCAAGGGTTATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR-3UTR CAA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGCAAAGTTGTGTCAAGTaGATCCCTATTAATCCCATA | + |
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Preference number: 3 (lower is better) Translates to: DSIIQVILVTSNKHVKIRQSCVK*IPINPI Trigger: TATGGGATTAATAGGGATCAACTTGACACAACTTTG...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| 3UTR CCA 72 bp | ATTTCTAAGCATAATCACAGCTGGTTGAATGCAATGTaGTATACACCAAAATCTTTATGGATGTCACATGGT | + |
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Preference number: 3 (lower is better) Translates to: ISKHNHSWLNAM*YTPKSLWMSHG Trigger: ACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTGCATTCAACCAGCTGTGATTATGCTTAGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR GCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCCCCCGCGCTGAAAGCTaGCCCAATGGCGAGGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRAPRAES*PNGEAV Trigger: GACGGCCTCGCCATTGGGGCAGCTTTCAGCGCGGGG...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR CCA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATGCAAGGGGCTTGAGTTaGAGCCAGTCAGCATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNARGLS*SQSASG Trigger: ACCGGATGCTGACTGGCTCCAACTCAAGCCCCTTGC...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGTGTCTGTGGTGCCACTaGTGGCTGTGCTTCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLCLWCH*WLCFLS Trigger: GCTGAGGAAGCACAGCCACCAGTGGCACCACAGACA...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGCCATGGCCAAGCTCATaGCCACTGTGCTCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLPWPSS*PLCSGR Trigger: TCTTCCTGAGCACAGTGGTCATGAGCTTGGCCATGG...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR GCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGTGGGCGTGTCTGTGGTaGCACTGGTGGCTGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLWACLW*HWWLCF Trigger: GAAGCACAGCCACCAGTGGCACCACAGACACGCCCA...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR GCA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATGGCATACTGACCGACTaGCGTGCCTATGAGCATTCC | + |
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Preference number: 4 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNGILTD*RAYEHS Trigger: GGAATGCTCATAGGCACGGCAGTCGGTCAGTATGCC...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGCCTCCTGACCTTCACTaGCTTCACTTCAGACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLPPDLH*LHFRLL Trigger: GAGCAGTCTGAAGTGAAGTCAGTGAAGGTCAGGAGG...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR TCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCCAGGGCAAAGGTACGTaGATAGATCCGGTGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRAQGKGT*IDPVRW Trigger: CCATCTCACCGGATCTATTCACGTACCTTTGCCCTG...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR CCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGCTGTGGTGCCACTGGTaGCTGTGCTTCCTCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLLWCHW*LCFLST Trigger: AGTGCTGAGGAAGCACAGCCACCAGTGGCACCACAG...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGTCTGCTGTCGATCTaGTACAGCAATGCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLSLLSI*YSNAGQ Trigger: TTGCCCTGCATTGCTGTATCAGATCGACAGCAGACT...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCACTGGACAGAAGCCATaGTCCTCATGGTCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRATGQKP*SSWSPS Trigger: AGATGGTGACCATGAGGAGCATGGCTTCTGTCCAGT...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCCGAAGATCCAGAGTGTaGTGTTGTTGGCATACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRARRSRV*CCWHTD Trigger: GTCAGTATGCCAACAACATCACACTCTGGATCTTCG...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATTCCATGCAGCATTTCTaGAAGCATATCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNSMQHF*KHIHQG Trigger: GCCTTGGTGGATATGCTTCCAGAAATGCTGCATGGA...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGCCTCGTGCTCATGAATaGTGTGCAGTCCATCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLPRAHE*CAVHHC Trigger: ACAGTGATGGACTGCACACCATTCATGAGCACGAGG...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| 3UTR CAA 72 bp | GTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTaGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VMTVIGMPSAEN*CAKPLTARRAE Trigger: CTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAGGATGCCGTCACCCATaGTCACCATCCAGGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: GEVMTVIGMPSAENLCAKGCRHP*SPSRLY Trigger: ATATAGCCTGGATGGTGATCATGGGTGACGGCATCC...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATAGTCAGCATCCGGTGTaGTGTTTAACTTATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNSQHPV*CLTYDL Trigger: CAGATCATAAGTTAAACAGCACACCGGATGCTGACT...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATCTTGCTTTACGGTCATaGCTGCTTTTAGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNLALRS*LLLEEL Trigger: CAGTTCTTCTAAAAGCAGGCATGACCGTAAAGCAAG...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCTTGTACACAATTGCTTaGTTTACGGTCATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRALYTIA*FTVMPA Trigger: AGCAGGCATGACCGTAAAGCAAGCAATTGTGTACAA...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAACCATCCAGGCTATATTaGCTATTCCTGTTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TALSTPAPFSKVAQRAKQPSRLY*LFLFPS Trigger: TGAAGGAAACAGGAATAGCCAATATAGCCTGGATGG...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGCTATGTAAGCCATCATaGCAGAGAGCAGATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLLCKPS*QRADCT Trigger: TGTACAATCTGCTCTCTGCCATGATGGCTTACATAG...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGTGGCGAGGCCGTCACTaGAGTTGTGGATGCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSWRGRH*SCGCRH Trigger: GTGACGGCATCCACAACTTCAGTGACGGCCTCGCCA...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | TGTATAAATGAAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGACTCCGTCACTGAAGTTGTaGATGCCGTCACCCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: CINEEWVAWDVNSCMHMTPSLKL*MPSPMI Trigger: GATCATGGGTGACGGCATCCACAACTTCAGTGACGG...AGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCTTTTCTAACATGTGGTaGTTCTCGCTTTCTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KLTALSTPAPFSKVAQRAFSNMW*FSLSSM Trigger: CATACTAGAAAGCGAGAAGCACCACATGTTAGAAAA...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAGGAGGGGATTCTTGTTaGGCTTCTAAATCCGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEVMTVIGMPSAENLCAKGGDSC*ASKSVS Trigger: ACTGACGGATTTAGAAGCCCAACAAGAATCCCCTCC...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | TGTATAAATGAAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGACTAATGAACTGCCCAACTaGACAGAAGCCATGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CINEEWVAWDVNSCMHMTNELPN*TEAMLL Trigger: GAGGAGCATGGCTTCTGTCCAGTTGGGCAGTTCATT...AGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGTTTATTGGTCTCTGGTaGAGGGCTGTGACCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRFIGLW*RAVTGL Trigger: GAGCCCGGTCACAGCCCTTCACCAGAGACCAATAAA...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTTCAGGAAGATGCGCATaGGGATGGCCAGGGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FWESSVSIRNIYKMTHHCSGRCA*GWPGLC Trigger: ACATAGCCCTGGCCATCCTCATGCGCATCTTCCTGA...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | TGTATAAATGAAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGACTTCATGTGGCAGTTCATaGCAGAAGACGGCTATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CINEEWVAWDVNSCMHMTSCGSS*QKTAMD Trigger: ATCCATAGCCGTCTTCTGTCATGAACTGCCACATGA...AGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACTCAGGGCCATGGTCATaGTCTTCATGGCAGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCGIHQNLYGCHMVTASYSGPWS*SSWQWL Trigger: CAACCACTGCCATGAAGACCATGACCATGGCCCTGA...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGCGGTCGTCTTCACTCTaGTCTTTGTGGCTAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRRSSSL*SLWLGV Trigger: CACCCCTAGCCACAAAGACCAGAGTGAAGACGACCG...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGATGTCAGTAAACAGATaGGGCAAAACTTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLMSVNR*GKTLCV Trigger: TACACACAAAGTTTTGCCTCATCTGTTTACTGACAT...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAATCATATTGTTCACTGTaGTCATGGTTGGGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEVMTVIGMPSAENLCAKSYCSL*SWLGRK Trigger: TTTCCTCCCCAACCATGATCACAGTGAACAATATGA...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGCGACTGCCGTGCCTATaGGCATTCCTATGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSRLPCL*AFLCKP Trigger: TGGCTTACATAGGAATGCTCATAGGCACGGCAGTCG...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAAAATGCTTTCCCTCTTaGACTGCCAGAATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEVMTVIGMPSAENLCAKKCFPS*TARMSK Trigger: CTTAGACATTCTGGCAGTGCAAGAGGGAAAGCATTT...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS-3UTR CCA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGAATTTGAAGCATCCTTaGTTGATGATGGGAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLNLKHP*LMMGTK Trigger: TTTGGTTCCCATCATCAACCAAGGATGCTTCAAATT...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| 3UTR CAA 72 bp | ACCCTTGCTTATAACATATCAAAGAAATATTGGAGATaGACCTCTGACACCTGGTCGCATGTGTTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLAYNISKKYWR*TSDTWSHVLPS Trigger: TGAGGGCAACACATGCGACCAGGTGTCAGAGGTCAATCTCCAATATTTCTTTGATATGTTATAAGCAAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACTGGCCAAGGTCCTCGTaGTTAATCTCAACGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCGIHQNLYGCHMVTASYWPRSS*LISTTL Trigger: CAAAGTCGTTGAGATTAATCACGAGGACCTTGGCCA...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTGATGGGCAGTTCAGCTaGCTCTTTCTCTGGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: FWESSVSIRNIYKMTHHCDGQFS*LFLWIT Trigger: TGTGATCCAGAGAAAGAGGCAGCTGAACTGCCCATC...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| 3UTR CAA 72 bp | TGTATCTTGGTTTTGAAAGCAAAATATCCCAGTCACTaGAAGTTGACAGCACTGAGCACACCAGCACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CILVLKAKYPSH*KLTALSTPAPF Trigger: AAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTTCAAGTGACTGGGATATTTTGCTTTCAAAACCAAGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGGTATGCGAATGGAAATaGTTTCCCTCTTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRVCEWK*FPSCTA Trigger: GGCAGTGCAAGAGGGAAAGCATTTCCATTCGCATAC...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGTGGTGGGTATGCGAATaGAAATGCTTTCCCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRWWVCE*KCFPSC Trigger: GCAAGAGGGAAAGCATTTCCATTCGCATACCCACCA...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGCACTGTGATCATGGTTaGGGAGGAAACCTGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSHCDHG*GGNLVY Trigger: ATACACCAGGTTTCCTCCCCAACCATGATCACAGTG...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGACACGGTCAAGTTTGTaGACCCGGTTATGCTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRTRSSL*TRLCSY Trigger: ATATGAGCATAACCGGGTTCACAAACTTGACCGTGT...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTTGTGAGAATGGTCCATaGTTTTCTCTTCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FWESSVSIRNIYKMTHHCCENGP*FSLPPH Trigger: GTGTGGAGGAAGAGAAAATCATGGACCATTCTCACA...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTGCTCTTGTGTTTTATTaGTCTCTGGTGAAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FWESSVSIRNIYKMTHHCALVFY*SLVKGC Trigger: ACAGCCCTTCACCAGAGACCAATAAAACACAAGAGC...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | TGTATAAATGAAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGACTACTTTTTCTAACATGTaGTGCTTCTCGCTTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CINEEWVAWDVNSCMHMTTFSNM*CFSLSS Trigger: ACTAGAAAGCGAGAAGCACCACATGTTAGAAAAAGT...AGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGCCTGCACTGAAAATTTaGTTGACTCTGACTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSPALKI*LTLTLS Trigger: TGACAGAGTCAGAGTCAAGCAAATTTTCAGTGCAGG...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGAGCTGCCTCTTTCTCTaGATCACATTTGTGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRSCLFL*ITFVVS Trigger: AGAAACCACAAATGTGATCCAGAGAAAGAGGCAGCT...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| 3UTR CAA 72 bp | TGGATGTCACATGGTGACAGCATCATACAAGTAATATaGGTGACCTCCAACAAGCATGTTAAAATTAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WMSHGDSIIQVI*VTSNKHVKIRL Trigger: TAGCCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTCACCATGTGACATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGTGGCAGTGGTTGCAATaGTGGAAAATAAATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRWQWLQ*WKINVS Trigger: ACTGACATTTATTTTCCATCATTGCAACCACTGCCA...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGGACTTCACTTCAGACTaGTCTTGTGTTTTATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSDFTSD*SCVLLV Trigger: GACCAATAAAACACAAGAGCAGTCTGAAGTGAAGTC...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR TCA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGTTTGTGGTTTCTTTTTaGTGTCACACTGGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSIIQVILVTSNKHVKIRFVVSF*CHTGCS Trigger: ACTACAACCAGTGTGACATCAAAAAGAAACCACAAA...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR GCA 90 bp | TTTTGGGAGAGTTCCGTAAGCATTAGGAACATATATAAAATGACACACCACTGTAGGGGTGGAATAAATTaGACTTTTTCTAACATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FWESSVSIRNIYKMTHHCRGGIN*TFSNMW Trigger: CCACATGTTAGAAAAAGTGCAATTTATTCCACCCCT...ACAGTGGTGTGTCATTTTATATATGTTCCTAATGCTTACGGAACTCTCCCAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| 3UTR CAA 72 bp | CAACAAAAATGTTTAGATATTTTAGCAAGTATCACCTaGCAGGACCATAATCACATTGAAGCCACTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QQKCLDILASIT*QDHNHIEATDL Trigger: TAAGTCAGTGGCTTCAATGTGATTATGGTCCTGCAAGGTGATACTTGCTAAAATATCTAAACATTTTTGTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | GATCACCATCCAGGCTATATTGGCTATTCCTGTTTCCTTCAGGTCTaGGCCGGAGTGGCAGGGCCCGTGAGAATGATGGGCGTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DHHPGYIGYSCFLQV*AGVAGPVRMMGVSV Trigger: CACAGACACGCCCATCATTCTCACGGGCCCTGCCACTCCGGCTCAGACCTGAAGGAAACAGGAATAGCCAATATAGCCTGGATGGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAAAGCAAGGGGCTTGAGTaGGAGCCAGTCAGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TALSTPAPFSKVAQRAKQSKGLE*EPVSIR Trigger: CCGGATGCTGACTGGCTCCAACTCAAGCCCCTTGCT...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | GCCGGTCTTCAGAGACTACCGAGTCATCCGTTCCAGCAAGGGGCTTaGGTTGGAGCCAGTCAGCATCCGGTGTGCTGTTTAACTTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLQRLPSHPFQQGA*VGASQHPVCCLTYD Trigger: ATCATAAGTTAAACAGCACACCGGATGCTGACTGGCTCCAACTCAAGCCCCTTGCTGGAACGGATGACTCGGTAGTCTCTGAAGACCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 90 bp | GATTGCGAAGATCCAGAGTGTGATGTTGTTGGCATACTGACCGACTaGCGTGCCTATGAGCATTCCTATGTAAGCCATCATGGCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DCEDPECDVVGILTD*RAYEHSYVSHHGRE Trigger: CTCTCTGCCATGATGGCTTACATAGGAATGCTCATAGGCACGGCAGTCGGTCAGTATGCCAACAACATCACACTCTGGATCTTCGCAATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAATGCTCTTGTGTTTTATaGGTCTCTGGTGAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TALSTPAPFSKVAQRAKQCSCVL*VSGEGL Trigger: CAGCCCTTCACCAGAGACCAATAAAACACAAGAGCA...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGAGAAAGAGACAACTGCTGGGGCGTCTCCACTCATaGTTCCTACTGCTAGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TCVQNHLLQGGLRKRQLLGRLHS*FLLLVQ Trigger: TTGCACTAGCAGTAGGAACAATGAGTGGAGACGCCC...CAGCAGTTGTCTCTTTCTCAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | GATGGAAGCGGTGATTGCGGTCATGCAGGTGTTTATCATCAGCTTTaGTGGGCAGTTCAGCTGCCTCTTTCTCTGGATCACATTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DGSGDCGHAGVYHQL*WAVQLPLSLDHICG Trigger: ACCACAAATGTGATCCAGAGAAAGAGGCAGCTGAACTGCCCATCAAAGCTGATGATAAACACCTGCATGACCGCAATCACCGCTTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | AAAGTCTGCTGTCGATCTGATACAGCAATGCAGGGCAAAGGTACGTaGATAGATCCGGTGAGATGGGAGAGTTCGGACCAAGACCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVCCRSDTAMQGKGT*IDPVRWESSDQDQS Trigger: ACTTTGGTCTTGGTCCGAACTCTCCCATCTCACCGGATCTATTCACGTACCTTTGCCCTGCATTGCTGTATCAGATCGACAGCAGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATTTAATCTCAACGACTTaGATCTCTCCAAGGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNLISTT*ISPRPK Trigger: CTTGGGCCTTGGAGAGATCAAAGTCGTTGAGATTAA...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAACACTTCAGACTGCTCTaGTGTTTTATTGGTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TALSTPAPFSKVAQRAKQHFRLL*CFIGLW Trigger: CCAGAGACCAATAAAACACAAGAGCAGTCTGAAGTG...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAACCGATGCCCCTATATTaGTCTTATCTTCAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TALSTPAPFSKVAQRAKQPMPLY*SYLQEP Trigger: TGGTTCCTGAAGATAAGACAAATATAGGGGCATCGG...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCAAGCAAACCATCCAGGCTATATaGGCTATTCCTGTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TALSTPAPFSKVAQRAKQTIQAI*AIPVSF Trigger: GAAGGAAACAGGAATAGCCAATATAGCCTGGATGGT...TTGCTTGGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | GCAATAACCAGCATGATGGCGAATCCAAACAGCAGTCCTAAATTCTaGAGAATGAACTGCCCAACTGGACAGAAGCCATGCTCCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: AITSMMANPNSSPKF*RMNCPTGQKPCSSW Trigger: CCATGAGGAGCATGGCTTCTGTCCAGTTGGGCAGTTCATTCTTCAGAATTTAGGACTGCTGTTTGGATTCGCCATCATGCTGGTTATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | GCATGCCCAGTGCTGAAAACTTGTGTGCAAAACCACTTACTGCAAGGAGGGCTGCCGGTTATGCTCATATaGTTCACTGTGATCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ACPVLKTCVQNHLLQGGLPVMLI*FTVIMV Trigger: AACCATGATCACAGTGAACAATATGAGCATAACCGG...CAGCCCTCCTTGCAGTAAGTGGTTTTGCACACAAGTTTTCAGCACTGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | AAGTTGACAGCACTGAGCACACCAGCACCTTTTAGCAAGGTTGCTCAAAGGGCCATGGCAGAGAGCAGATaGTACACAATTGCTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLTALSTPAPFSKVAQRAMAESR*YTIACF Trigger: AAAGCAAGCAATTGTGTACAATCTGCTCTCTGCCAT...GGCCCTTTGAGCAACCTTGCTAAAAGGTGCTGGTGTGCTCAGTGCTGTCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | AGATGGGAGAGTTCGGACCAAGACCAAAGTGTTTTAACAACTGAGTaGCGTTCAAACATTCATGCTGGCGGTCGTCTTCACTCTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWESSDQDQSVLTTE*RSNIHAGGRLHSGL Trigger: AAGACCAGAGTGAAGACGACCGCCAGCATGAATGTTTGAACGTCACTCAGTTGTTAAAACACTTTGGTCTTGGTCCGAACTCTCCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 90 bp | GCGGTCGTCTTCACTCTGGTCTTTGTGGCTAGGGGTGGAATAAATTaGACTTTTTCTAACATGTGGTGCTTCTCGCTTTCTAGTATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AVVFTLVFVARGGIN*TFSNMWCFSLSSMS Trigger: CGACATACTAGAAAGCGAGAAGCACCACATGTTAGAAAAAGTGCAATTTATTCCACCCCTAGCCACAAAGACCAGAGTGAAGACGACCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 90 bp | CACAGCATCATATTCTTCCAAAAACTCCTTAGATTCATGCCCATGTaGATGACCATGTCCGTGCGTATGCTGATGACTGTGGTCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSIIFFQKLLRFMPM*MTMSVRMLMTVVMS Trigger: GGACATGACCACAGTCATCAGCATACGCACGGACATGGTCATTCACATGGGCATGAATCTAAGGAGTTTTTGGAAGAATATGATGCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CCA 90 bp | ACTGCTAGTGCAACAAGGAACGTGAGAAGGAATTTGAAGCATCCTTaGTTGATGATGGGAACCAAAATCACACCCAGCAAGGAAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TASATRNVRRNLKHP*LMMGTKITPSKESR Trigger: TCTGCTTTCCTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGCACTAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CGACGTGCATACAGTACAAGGAACAGAGGCAAGCTGCACGAGCATTCTCGCAATTTCTCTGGATCACATTaGTGGTTTCTTTTTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRAYSTRNRGKLHEHSRNFSGSH*WFLFDV Trigger: GACATCAAAAAGAAACCACAAATGTGATCCAGAGAA...ATTGCGAGAATGCTCGTGCAGCTTGCCTCTGTTCCTTGTACTGTATGCACGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | GGTGAAGTAATGACTGTCATAGGCATGCCCAGTGCTGAAAACTTGTGTGCAAAAAACGTGAGAAGGAATTaGAAGCATCCTTGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GEVMTVIGMPSAENLCAKNVRRN*KHPWLM Trigger: CATCAACCAAGGATGCTTCAAATTCCTTCTCACGTT...TTTTGCACACAAGTTTTCAGCACTGGGCATGCCTATGACAGTCATTACTTCACC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 90 bp | TCATGGCAGAGAGCAGATTGTACACAATTGCTTGCTTTACGGTCATaGCTGCTTTTAGAAGAACTGCAAAATCACCTAATTCATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SWQRADCTQLLALRS*LLLEELQNHLIHVA Trigger: TGCCACATGAATTAGGTGATTTTGCAGTTCTTCTAAAAGCAGGCATGACCGTAAAGCAAGCAATTGTGTACAATCTGCTCTCTGCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | GACAGCATCATACAAGTAATATTGGTGACCTCCAACAAGCATGTTAAAATTAGGATCAGGATCAAGTTCTaGGTGTCCATGGCCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSIIQVILVTSNKHVKIRIRIKF*VSMAKL Trigger: GAGCTTGGCCATGGACACCAAGAACTTGATCCTGAT...CCTAATTTTAACATGCTTGTTGGAGGTCACCAATATTACTTGTATGATGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | TGTATAAATGAAGAGTGGGTGGCATGGGATGTAAACAGCTGTATGCACATGACTGAATTTGAAGCATCCTaGGTTGATGATGGGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: CINEEWVAWDVNSCMHMTEFEAS*VDDGNQ Trigger: TTGGTTCCCATCATCAACCAAGGATGCTTCAAATTC...AGTCATGTGCATACAGCTGTTTACATCCCATGCCACCCACTCTTCATTTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 90 bp | TTTGTGGCTAGGGGTGGAATAAATTGCACTTTTTCTAACATGTGGTaGTTCTCGCTTTCTAGTATGTCGAAGTTCACCTTCATTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FVARGGINCTFSNMW*FSLSSMSKFTFIIR Trigger: CCTGATAATGAAGGTGAACTTCGACATACTAGAAAGCGAGAAGCACCACATGTTAGAAAAAGTGCAATTTATTCCACCCCTAGCCACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACATTGTACACAATTGCTaGCTTTACGGTCATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QCGIHQNLYGCHMVTASYIVHNC*LYGHAC Trigger: GCAGGCATGACCGTAAAGCAAGCAATTGTGTACAAT...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGGCAGATTGTACACAATaGCTTGCTTTACGGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSADCTQ*LALRSC Trigger: GCATGACCGTAAAGCAAGCAATTGTGTACAATCTGC...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAACTTCTATCAATATTGGTACACGGAGTTCCATGTTCTGACTTTATCGTTGAAGCATCCTTGGTaGATGATGGGAACCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LLNFYQYWYTEFHVLTLSLKHPW*MMGTKI Trigger: GATTTTGGTTCCCATCATCAACCAAGGATGCTTCAA...CGATAAAGTCAGAACATGGAACTCCGTGTACCAATATTGATAGAAGTTTAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGTATACACCAAAATCTTTATGGATGTCACATGGTGACAGCATCATACCTGTTTTCCTCTTTGTaGCTTGTAGTGCTTAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QCGIHQNLYGCHMVTASYLFSSL*LVVLKH Trigger: ATGTTTAAGCACTACAAGCAACAAAGAGGAAAACAG...GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | CCAGGCTATATTGGCTATTCCTGTTTCCTTCAGGTCTaGGCCGGAGTGGCAGGGCCCGTGAGAATGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGYIGYSCFLQV*AGVAGPVRMMG Trigger: GCCCATCATTCTCACGGGCCCTGCCACTCCGGCTCAGACCTGAAGGAAACAGGAATAGCCAATATAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | CACTTCAGACTGCTCTTGTGTTTTATTGGTCTCTGGTaGAGGGCTGTGACCGGGCTCCCCATGCTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HFRLLLCFIGLW*RAVTGLPMLTV Trigger: CACAGTGAGCATGGGGAGCCCGGTCACAGCCCTTCACCAGAGACCAATAAAACACAAGAGCAGTCTGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 72 bp | GGACAGAAGCCATGCTCCTCATGGTCACCATCTCCATaGAGCATTTCTGGAAGCATATCCACCAAGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GQKPCSSWSPSP*SISGSISTKAT Trigger: TGTGGCCTTGGTGGATATGCTTCCAGAAATGCTGCATGGAGATGGTGACCATGAGGAGCATGGCTTCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CCA 72 bp | ACTACCGAGTCATCCGTTCCAGCAAGGGGCTTGAGTTaGAGCCAGTCAGCATCCGGTGTGCTGTTTAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: TTESSVPARGLS*SQSASGVLFNL Trigger: TAAGTTAAACAGCACACCGGATGCTGACTGGCTCCAACTCAAGCCCCTTGCTGGAACGGATGACTCGGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | CCTCAGCACTGCTTTATCCTCATCATGGTGGTTATGTaGGGTCACGTGGACCTCGTGCTCATGAATGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PQHCFILIMVVM*GHVDLVLMNGV Trigger: CACACCATTCATGAGCACGAGGTCCACGTGACCTCACATAACCACCATGATGAGGATAAAGCAGTGCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | GGTGATTGCGGTCATGCAGGTGTTTATCATCAGCTTTaGTGGGCAGTTCAGCTGCCTCTTTCTCTGGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GDCGHAGVYHQL*WAVQLPLSLDH Trigger: GTGATCCAGAGAAAGAGGCAGCTGAACTGCCCATCAAAGCTGATGATAAACACCTGCATGACCGCAATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | TGTCGATCTGATACAGCAATGCAGGGCAAAGGTACGTaGATAGATCCGGTGAGATGGGAGAGTTCGGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: CRSDTAMQGKGT*IDPVRWESSDQ Trigger: TTGGTCCGAACTCTCCCATCTCACCGGATCTATTCACGTACCTTTGCCCTGCATTGCTGTATCAGATCGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS GCA 72 bp | GATCCAGAGTGTGATGTTGTTGGCATACTGACCGACTaGCGTGCCTATGAGCATTCCTATGTAAGCCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: DPECDVVGILTD*RAYEHSYVSHH Trigger: ATGATGGCTTACATAGGAATGCTCATAGGCACGGCAGTCGGTCAGTATGCCAACAACATCACACTCTGGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 72 bp | TACACGGTCAAGTTTGTGAACCCGGTTATGCTCATATaGTTCACTGTGATCATGGTTGGGGAGGAAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YTVKFVNPVMLI*FTVIMVGEETW Trigger: CCAGGTTTCCTCCCCAACCATGATCACAGTGAACAATATGAGCATAACCGGGTTCACAAACTTGACCGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 72 bp | ATGTCGAAGTTCACCTTCATTATCAGGATCAAGTTCTaGGTGTCCATGGCCAAGCTCATGACCACTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: MSKFTFIIRIKF*VSMAKLMTTVL Trigger: GAGCACAGTGGTCATGAGCTTGGCCATGGACACCAAGAACTTGATCCTGATAATGAAGGTGAACTTCGACAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 90 bp | AGGGCTATGTACACGGTCAAGTTTGTGAACCCGGTTATGCTCATATaGTTCACTGTGATCATGGTTGGGGAGGAAACCTGGTGTATTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RAMYTVKFVNPVMLI*FTVIMVGEETWCIN Trigger: GTTAATACACCAGGTTTCCTCCCCAACCATGATCACAGTGAACAATATGAGCATAACCGGGTTCACAAACTTGACCGTGTACATAGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 90 bp | CTTTCTAGTATGTCGAAGTTCACCTTCATTATCAGGATCAAGTTCTaGGTGTCCATGGCCAAGCTCATGACCACTGTGCTCAGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LSSMSKFTFIIRIKF*VSMAKLMTTVLRKM Trigger: CATCTTCCTGAGCACAGTGGTCATGAGCTTGGCCATGGACACCAAGAACTTGATCCTGATAATGAAGGTGAACTTCGACATACTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 90 bp | GCTAGTGCAACAAGGAACGTGAGAAGGAATTTGAAGCATCCTTGGTaGATGATGGGAACCAAAATCACACCCAGCAAGGAAAGCAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: ASATRNVRRNLKHPW*MMGTKITPSKESRL Trigger: TAGTCTGCTTTCCTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGCACTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 90 bp | CTCATTGTTCCTACTGCTAGTGCAACAAGGAACGTGAGAAGGAATTaGAAGCATCCTTGGTTGATGATGGGAACCAAAATCACACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LIVPTASATRNVRRN*KHPWLMMGTKITPS Trigger: GCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGCACTAGCAGTAGGAACAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CCA 72 bp | GCAACAAGGAACGTGAGAAGGAATTTGAAGCATCCTTaGTTGATGATGGGAACCAAAATCACACCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATRNVRRNLKHP*LMMGTKITPSK Trigger: CTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 72 bp | ACAAGGAACGTGAGAAGGAATTTGAAGCATCCTTGGTaGATGATGGGAACCAAAATCACACCCAGCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRNVRRNLKHPW*MMGTKITPSKE Trigger: TTCCTTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 72 bp | TGCAACAAGGAACGTGAGAAGGAATTTGAAGCATCCTaGGTTGATGATGGGAACCAAAATCACACCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: CNKEREKEFEAS*VDDGNQNHTQQ Trigger: TTGCTGGGTGTGATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS CAA 72 bp | CCTACTGCTAGTGCAACAAGGAACGTGAGAAGGAATTaGAAGCATCCTTGGTTGATGATGGGAACCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PTASATRNVRRN*KHPWLMMGTKI Trigger: GATTTTGGTTCCCATCATCAACCAAGGATGCTTCAAATTCCTTCTCACGTTCCTTGTTGCACTAGCAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
||
| CDS TCA 72 bp | ATATTCTTCCAAAAACTCCTTAGATTCATGCCCATGTaGATGACCATGTCCGTGCGTATGCTGATGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: IFFQKLLRFMPM*MTMSVRMLMTV Trigger: CACAGTCATCAGCATACGCACGGACATGGTCATTCACATGGGCATGAATCTAAGGAGTTTTTGGAAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS GCA 72 bp | TTCACTCTGGTCTTTGTGGCTAGGGGTGGAATAAATTaGACTTTTTCTAACATGTGGTGCTTCTCGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FTLVFVARGGIN*TFSNMWCFSLS Trigger: AGAAAGCGAGAAGCACCACATGTTAGAAAAAGTGCAATTTATTCCACCCCTAGCCACAAAGACCAGAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS GCA 72 bp | AGGGGTGGAATAAATTGCACTTTTTCTAACATGTGGTaGTTCTCGCTTTCTAGTATGTCGAAGTTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: RGGINCTFSNMW*FSLSSMSKFTF Trigger: GAAGGTGAACTTCGACATACTAGAAAGCGAGAAGCACCACATGTTAGAAAAAGTGCAATTTATTCCACCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS TCA 72 bp | TTGTCAAAATGTTCAATACAAAGTCTGCTGTCGATCTaGTACAGCAATGCAGGGCAAAGGTACGTGAATAGA | + |
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Preference number: 6 (lower is better) Translates to: LSKCSIQSLLSI*YSNAGQRYVNR Trigger: TCTATTCACGTACCTTTGCCCTGCATTGCTGTATCAGATCGACAGCAGACTTTGTATTGAACATTTTGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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| CDS GCA 72 bp | AGAGCAGATTGTACACAATTGCTTGCTTTACGGTCATaGCTGCTTTTAGAAGAACTGCAAAATCACCTAATT | + |
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Preference number: 6 (lower is better) Translates to: RADCTQLLALRS*LLLEELQNHLI Trigger: AATTAGGTGATTTTGCAGTTCTTCTAAAAGCAGGCATGACCGTAAAGCAAGCAATTGTGTACAATCTGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027131.6 |
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