Pregenerated sensors for SLC38A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047789Ensembl transcript IDs: ENSMUST00000052514.6, ENSMUST00000223581.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCCTCAGTGGGGCCTGGTGGAGCCCTCCCTGTGCTCCTGGCTCTaGGAGGTGAAGGAAAGAGATGCAAAGCTCAGGGCCATCGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GPQWGLVEPSLCSWL*EVKERDAKLRAIAD Trigger: GTCAGCGATGGCCCTGAGCTTTGCATCTCTTTCCTTCACCTCCCAGAGCCAGGAGCACAGGGAGGGCTCCACCAGGCCCCACTGAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | GCCAGCATGAAACCTGGACCTGTCCTTCTAACCAAAGGTCCTCAGTaGGGCCTGGTGGAGCCCTCCCTGTGCTCCTGGCTCTGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: ASMKPGPVLLTKGPQ*GLVEPSLCSWLWEV Trigger: CACCTCCCAGAGCCAGGAGCACAGGGAGGGCTCCACCAGGCCCCACTGAGGACCTTTGGTTAGAAGGACAGGTCCAGGTTTCATGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | GCAGGTAGAGGGTGTTGGCTCCTGGAGGCCACACCTGAACCAGGATaGCTCGGGCACACTGGGCAGATTCCTTTCCCTTTTGAAGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AGRGCWLLEATPEPG*LGHTGQIPFPFEEP Trigger: AGGCTCTTCAAAAGGGAAAGGAATCTGCCCAGTGTGCCCGAGTCATCCTGGTTCAGGTGTGGCCTCCAGGAGCCAACACCCTCTACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | AACTGGGGAAATGGCCCAGCAAGTAAGAAGGTGGAAGAGCCCACATaGAAGCACACACAGGGTCTGGCAACAGCCCTGACCCAAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: NWGNGPASKKVEEPT*KHTQGLATALTQDP Trigger: GGGGTCTTGGGTCAGGGCTGTTGCCAGACCCTGTGTGTGCTTCCATGTGGGCTCTTCCACCTTCTTACTTGCTGGGCCATTTCCCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | TCCGTGGCACATAAGGAAGGTGACTCAGTTGCTGGGTCACAAGGGTaGACAAAGGATGCTCCTCCACCGGGGCCACACCTTGCCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: SVAHKEGDSVAGSQG*TKDAPPPGPHLACS Trigger: TGAACAGGCAAGGTGTGGCCCCGGTGGAGGAGCATCCTTTGTCCACCCTTGTGACCCAGCAACTGAGTCACCTTCCTTATGTGCCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR GCA 90 bp | GGTTCCTACCCCCTCCATTCTCATACGAGCCAGGACACACACTCGTaGGCAGAGTTCTCTGACTCTGTGGCAAGGCCAAAGGAGGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GSYPLHSHTSQDTHS*AEFSDSVARPKEAH Trigger: ATGAGCCTCCTTTGGCCTTGCCACAGAGTCAGAGAACTCTGCGCACGAGTGTGTGTCCTGGCTCGTATGAGAATGGAGGGGGTAGGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | GTGAGGAACTCTGAGTGTGCGGCTGAACACACGCCACAGCTGGTTTaGGGAGGATCTGGAGCTCTCAGGAAACAGTGCTACTGGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: VRNSECAAEHTPQLV*GGSGALRKQCYWRK Trigger: CTTCCTCCAGTAGCACTGTTTCCTGAGAGCTCCAGATCCTCCCCAAACCAGCTGTGGCGTGTGTTCAGCCGCACACTCAGAGTTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | GAGTGGGGGTGGGGAGGTGTCAGAACAGCGCAGCTCATCCCTGCTTaGGAACCGCAAGGCAGAGTCTGTGATAAACACCGTGTCATCTTA | + |
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Preference number: 1 (lower is better) Translates to: EWGWGGVRTAQLIPA*EPQGRVCDKHRVIL Trigger: TAAGATGACACGGTGTTTATCACAGACTCTGCCTTGCGGTTCCCAAGCAGGGATGAGCTGCGCTGTTCTGACACCTCCCCACCCCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | CCATTCTCATACGAGCCAGGACACACACTCGTGCGCAGAGTTCTCTaGCTCTGTGGCAAGGCCAAAGGAGGCTCATGGGGAAAACAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PFSYEPGHTLVRRVL*LCGKAKGGSWGKQG Trigger: TCCTTGTTTTCCCCATGAGCCTCCTTTGGCCTTGCCACAGAGTCAGAGAACTCTGCGCACGAGTGTGTGTCCTGGCTCGTATGAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | CAAGCTGGACACTGTACTCTTGATCTCCTAGATGCAGATGCAACGTaGTTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: QAGHCTLDLLDADAT*LASPALEPVSKPSW Trigger: CCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCATCTGCATCTAGGAGATCAAGAGTACAGTGTCCAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | GCTCTGGGAGGTGAAGGAAAGAGATGCAAAGCTCAGGGCCATCGCTaGCTACATAATGGGTTCAAAGCCAGGAGAGCCTGCAAGAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: ALGGEGKRCKAQGHR*LHNGFKARRACKSL Trigger: AAGACTCTTGCAGGCTCTCCTGGCTTTGAACCCATTATGTAGTCAGCGATGGCCCTGAGCTTTGCATCTCTTTCCTTCACCTCCCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR GCA 90 bp | TCGGGCACACTGGGCAGATTCCTTTCCCTTTTGAAGAGCCTCACATaGCCATCTCCACTTGTGCTTCTTCCATTGGGCTTCATGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: SGTLGRFLSLLKSLT*PSPLVLLPLGFMTV Trigger: GACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATCTGCCCAGTGTGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | CGCTTAACACAAGGTCAGGCATCCGGTAGGTTCTTAGGTACTGAATaGTCAATCTGGAACCTAACTGACTCTTCCTCACCCCACCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RLTQGQASGRFLGTE*SIWNLTDSSSPHPH Trigger: GTGGGGGTGGGGTGAGGAAGAGTCAGTTAGGTTCCAGATTGATCATTCAGTACCTAAGAACCTACCGGATGCCTGACCTTGTGTTAAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | GCCATCCCAGCTCTCTGGAGACAGGCAGGACGAGCACCACAAATTTaGGGCCAGACAGGAGTACACAATCAAGGCTCTTTCTCAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: AIPALWRQAGRAPQI*GQTGVHNQGSFSKQ Trigger: TTGTTTTGAGAAAGAGCCTTGATTGTGTACTCCTGTCTGGCCTCAAATTTGTGGTGCTCGTCCTGCCTGTCTCCAGAGAGCTGGGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | GAGTTTATAGGCAGAGCCCAATGGACTATACACATAGCATTCCTCTaGAGCAGGGACGACATGGTCTGGAGCAATCAGTGCCTTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: EFIGRAQWTIHIAFL*SRDDMVWSNQCLVC Trigger: GCAGACAAGGCACTGATTGCTCCAGACCATGTCGTCCCTGCTCCAGAGGAATGCTATGTGTATAGTCCATTGGGCTCTGCCTATAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
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| 3UTR GCA 90 bp | CCTGCCTGCGCTCACGGAACGTGTTTCTCACATCTATCTGGGTCATaGTGTGGCCGTTTGTTTGTTCTTGAGCTGTCTTCTAATTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PACAHGTCFSHLSGS*CGRLFVLELSSNLQ Trigger: CTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGATGTGAGAAACACGTTCCGTGAGCGCAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | TACCTTTCCAGAAGATCAGGACATTCAAGAAGGCCCCTGACAGCCTaGCATGGGACACAGCCACAGTCACTTAAGAAATTCAGTCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: YLSRRSGHSRRPLTA*HGTQPQSLKKFSPA Trigger: TGCAGGACTGAATTTCTTAAGTGACTGTGGCTGTGTCCCATGTCAGGCTGTCAGGGGCCTTCTTGAATGTCCTGATCTTCTGGAAAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR GCA 90 bp | TCTACTCTTCAAGCTAACACAGCCGAATCCGGCTTCCCATCTGTATaGGCTTCTTCCTATCGGAGGCTCCAGAGTCTGTGTTTTTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: STLQANTAESGFPSV*ASSYRRLQSLCFSL Trigger: TAAGGAAAAACACAGACTCTGGAGCCTCCGATAGGAAGAAGCGCATACAGATGGGAAGCCGGATTCGGCTGTGTTAGCTTGAAGAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR GCA 90 bp | GGTCATGCTGTGGCCGTTTGTTTGTTCTTGAGCTGTCTTCTAATTTaGAGTTCTCTGTTTCAAAGCCCATGCCCACTTTTCCACTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GHAVAVCLFLSCLLI*SSLFQSPCPLFHCG Trigger: GCCACAGTGGAAAAGTGGGCATGGGCTTTGAAACAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CCA 90 bp | ACCATAGCCTTCAGTGTAACTCTTGAGTTTATAGGCAGAGCCCAATaGACTATACACATAGCATTCCTCTGGAGCAGGGACGACATGGTC | + |
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Preference number: 1 (lower is better) Translates to: TIAFSVTLEFIGRAQ*TIHIAFLWSRDDMV Trigger: GACCATGTCGTCCCTGCTCCAGAGGAATGCTATGTGTATAGTCCATTGGGCTCTGCCTATAAACTCAAGAGTTACACTGAAGGCTATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
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| 3UTR GCA 90 bp | GCAGCACCCAGTGTATTACTAATTACCTCCCACATTAAGCAATTATaGTTTCTGTCCAAGAGCCACAGGAAATCAATACTGCAGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: AAPSVLLITSHIKQL*FLSKSHRKSILQGS Trigger: TGATCCCTGCAGTATTGATTTCCTGTGGCTCTTGGACAGAAAGCATAATTGCTTAATGTGGGAGGTAATTAGTAATACACTGGGTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | ATCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATaGGAGACCATCATTTCCCTCGCTTTCAATTATCTTAGAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: ILNTYALPARVQKYL*ETIISLAFNYLRRT Trigger: TGTTCTTCTAAGATAATTGAAAGCGAGGGAAATGATGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR TCA 90 bp | CCCTCGCTTTCAATTATCTTAGAAGAACACTTAGAATTACAGCAATaGCAGCATTTTCAAGTTCTTTTATGCAGAACCGTTGCCAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: PSLSIILEEHLELQQ*QHFQVLLCRTVAKV Trigger: AACCTTGGCAACGGTTCTGCATAAAAGAACTTGAAAATGCTGTCATTGCTGTAATTCTAAGTGTTCTTCTAAGATAATTGAAAGCGAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CAA 90 bp | GGCAGGAGCCTGGCATCTCCGTGGCACATAAGGAAGGTGACTCAGTaGCTGGGTCACAAGGGTGGACAAAGGATGCTCCTCCACCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GRSLASPWHIRKVTQ*LGHKGGQRMLLHRG Trigger: GCCCCGGTGGAGGAGCATCCTTTGTCCACCCTTGTGACCCAGCAACTGAGTCACCTTCCTTATGTGCCACGGAGATGCCAGGCTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | AGCACATTTCTGGAGTGTGCTGATGGCAATGACTTGGCACAACCATCCATGCCCGAGCACGGGCTCCCATaGAGCCCAGTGGCCACGGGC | + |
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Preference number: 2 (lower is better) Translates to: STFLECADGNDLAQPSMPEHGLP*SPVATG Trigger: GCCCGTGGCCACTGGGCTGCATGGGAGCCCGTGCTC...GGGCATGGATGGTTGTGCCAAGTCATTGCCATCAGCACACTCCAGAAATGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CAA 90 bp | GGTCACAAGGGTGGACAAAGGATGCTCCTCCACCGGGGCCACACCTaGCCTGTTCACCACAGTGCTAAGCGCTTAACACAAGGTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GHKGGQRMLLHRGHT*PVHHSAKRLTQGQA Trigger: TGCCTGACCTTGTGTTAAGCGCTTAGCACTGTGGTGAACAGGCAAGGTGTGGCCCCGGTGGAGGAGCATCCTTTGTCCACCCTTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGGTGATTGGCCAGCCCTaGTTTGGAGCCTGTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LRVGPAGSVHFASQTGRMVIGQP*FGACFQ Trigger: TTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCAC...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCCTCGAGCACGGGCTCCCATGCAGCCCAGTGGCCACGGGCGTTTCTGTAGAATCGAGGACAACTaGTTTTGTTCAGGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RVPRARAPMQPSGHGRFCRIEDN*FCSGVR Trigger: TCTCACACCTGAACAAAAGCAGTTGTCCTCGATTCT...ACAGAAACGCCCGTGGCCACTGGGCTGCATGGGAGCCCGTGCTCGAGGAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGGATTCCTTTCCCTTTTaGAGAGCCTCACATGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LRVGPAGSVHFASQTGRMDSFPF*RASHAH Trigger: ATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATC...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGGAGACAGTTGAGCTTTaGGCAAACTGGGGAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: MQRDWPALLWSLFPSLPGETVEL*ANWGNG Trigger: GCCATTTCCCCAGTTTGCCCAAAGCTCAACTGTCTC...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR CCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCTGGCCAGCCCTGCTTTaGAGCCTGTTTCCAAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GRMPLLHANLTWICLGAFWPALL*SLFPSL Trigger: AAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCA...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATGGGACTGAGTGGGGGTaGGGAGGTGTCAGAACAGCG | + |
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Preference number: 2 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDGTEWG*GGVRTA Trigger: CGCTGTTCTGACACCTCCCCACCCCCACTCAGTCCC...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | ATAGGCAGAGCCCAATGGACTATACACATAGCATTCCTCTGGAGCAGGGACGACAATCAGTGCCTTGTCTaGAGGAGTGGTGAGCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: IGRAQWTIHIAFLWSRDDNQCLV*RSGEPA Trigger: AGCCGGCTCACCACTCCTGCAGACAAGGCACTGATT...GTCGTCCCTGCTCCAGAGGAATGCTATGTGTATAGTCCATTGGGCTCTGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACATTTCTGGAGTGTGCTGATGGCAATGACTTGGCACAACCATCCATGCCCGTGGAAGAGCCCACATaGAAGCACACACAGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: STFLECADGNDLAQPSMPVEEPT*KHTQGL Trigger: CAGACCCTGTGTGTGCTTCCATGTGGGCTCTTCCAC...GGGCATGGATGGTTGTGCCAAGTCATTGCCATCAGCACACTCCAGAAATGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATCTGACCCAAGACCCCTaGGATTCCTTGCTGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDLTQDP*DSLLWV Trigger: CACCCACAGCAAGGAATCTCAGGGGTCTTGGGTCAG...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGCCACGGGCGTTTCTGTaGGCCAGAGCTTTGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: ATGNQYCRDHQEERRTARPRAFL*ARALET Trigger: AGTCTCCAAAGCTCTGGCTCACAGAAACGCCCGTGG...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGCTTCATGACAGTCCATaGAGTTCTCAAGGGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: MQRDWPALLWSLFPSLPGLHDSP*SSQGQE Trigger: TTCTTGCCCTTGAGAACTGCATGGACTGTCATGAAG...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGGGAGACAAAGTCATTTaGCTTGTCCAACAGGACATC | + |
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Preference number: 2 (lower is better) Translates to: MQRDWPALLWSLFPSLPGGDKVI*LVQQDI Trigger: GATGTCCTGTTGGACAAGCCAAATGACTTTGTCTCC...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR CAA 90 bp | TGCCATCCCAGCTCTCTGGAGACAGGCAGGACGAGCACCACAAATTaGAGGCCAGACAGGAGTACACAATCAAGGCTCTTTCTCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CHPSSLETGRTSTTN*RPDRSTQSRLFLKT Trigger: TGTTTTGAGAAAGAGCCTTGATTGTGTACTCCTGTCTGGCCTCAAATTTGTGGTGCTCGTCCTGCCTGTCTCCAGAGAGCTGGGATGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCTTCCATTGGGCTTCATaGCAGTCCATGCAGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRMPLLHANLTWICLGAFFHWAS*QSMQFS Trigger: TGAGAACTGCATGGACTGTCATGAAGCCCAATGGAA...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATATTCAAGAAGGCCCCTaGCAGCCTGACATGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDIQEGP*QPDMGH Trigger: GTGTCCCATGTCAGGCTGTCAGGGGCCTTCTTGAAT...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR TCA 90 bp | AGCACGATGACACACATCCCAGTGGTAAATCCAGCCTGTTTTATGCCCCAAGGATGTCTGCAGGAGTGGTaGGCCGGCTGTAGTAATGAA | + |
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Preference number: 2 (lower is better) Translates to: STMTHIPVVNPACFMPQGCLQEW*AGCSNE Trigger: TTCATTACTACAGCCGGCTCACCACTCCTGCAGACA...TCCTTGGGGCATAAAACAGGCTGGATTTACCACTGGGATGTGTGTCATCGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGCACATTAAGCAATTATaGTTTCTGTCCAAGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LRVGPAGSVHFASQTGRMHIKQL*FLSKSH Trigger: GTGGCTCTTGGACAGAAAGCATAATTGCTTAATGTG...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCTGGAGCAATCAGTGCCTTGTCTGCAGGAGTGGTGAGCCGGCTGTAGTAAAAGGCCAGTTTAGTTaGCTTGGGTACTCTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: MVWSNQCLVCRSGEPAVVKGQFS*LGYSEN Trigger: GTTCTCAGAGTACCCAAGCCAACTAAACTGGCCTTT...TACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCTCCAGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
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| 3UTR CAA 90 bp | ACAGACTGGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTaGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACACAA | + |
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Preference number: 2 (lower is better) Translates to: TDWSHALVTRQPDLD*FGGIQAGVKLSETQ Trigger: TTGTGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACCAGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCGCTTTAGAGGGGATCTaGAAAACCCACAGAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRMPLLHANLTWICLGAFALEGI*KTHRSK Trigger: TTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAAGC...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR GCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATCAGTATAACACTCCCTaGTGCTACCAACTGTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDQYNTP*CYQLWG Trigger: CCCCCACAGTTGGTAGCAGCAGGGAGTGTTATACTG...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGTTATATAGACCAGGCTaGTTTCAAACTGGCCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: MQRDWPALLWSLFPSLPGLYRPG*FQTGHN Trigger: GTTATGGCCAGTTTGAAACCAGCCTGGTCTATATAA...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 90 bp | CTTTTGAAGAGCCTCACATGCCCATCTCCACTTGTGCTTCTTCCATaGGGCTTCATGACAGTCCATGCAGTTCTCAAGGGCAAGAATCGA | + |
|
Preference number: 2 (lower is better) Translates to: LLKSLTCPSPLVLLP*GFMTVHAVLKGKNR Trigger: TCGATTCTTGCCCTTGAGAACTGCATGGACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGATGGGCATGTGAGGCTCTTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 90 bp | GGGTCATGCTGTGGCCGTTTGTTTGTTCTTGAGCTGTCTTCTAATTaGCAGTTCTCTGTTTCAAAGCCCATGCCCACTTTTCCACTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSCCGRLFVLELSSN*QFSVSKPMPTFPLW Trigger: CCACAGTGGAAAAGTGGGCATGGGCTTTGAAACAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACGCAGGTAGAGGGTGTTaGCTCCTGGAGGCCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYAGRGC*LLEATP Trigger: AGGTGTGGCCTCCAGGAGCCAACACCCTCTACCTGC...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCACATTTCTGGAGTGTGCTGATGGCAATGACTTGGCACAACCATCCATGCCCGTACAAAAATACTTATaGGAGACCATCATTTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: STFLECADGNDLAQPSMPVQKYL*ETIISL Trigger: GAGGGAAATGATGGTCTCTCATAAGTATTTTTGTAC...GGGCATGGATGGTTGTGCCAAGTCATTGCCATCAGCACACTCCAGAAATGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACCTCACTGGCCCTAGCTaGCACATAGCTTCTGACGGA | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYLTGPS*HIASDG Trigger: TCCGTCAGAAGCTATGTGTCAGCTAGGGCCAGTGAG...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACACATTGGGGCTGGATTTaGATTAAGAGTCAGATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PDLDLFGGIQAGVKLSETHWGWI*IKSQIA Trigger: TGCTATCTGACTCTTAATTCAAATCCAGCCCCAATG...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGAATCCGCTTGTTCATAGCAGCAGCATGGTCACTAACCCTCTGAATGACATCTTGGCTTGGGTACTCTaGGAACAGAATGGCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: MNPLVHSSSMVTNPLNDILAWVL*EQNGFE Trigger: TTCAAAGCCATTCTGTTCTCAGAGTACCCAAGCCAA...GATGTCATTCAGAGGGTTAGTGACCATGCTGCTGCTATGAACAAGCGGATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR CAA 90 bp | GTTTCTCACATCTATCTGGGTCATGCTGTGGCCGTTTGTTTGTTCTaGAGCTGTCTTCTAATTTGCAGTTCTCTGTTTCAAAGCCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: VSHIYLGHAVAVCLF*SCLLICSSLFQSPC Trigger: GCATGGGCTTTGAAACAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGATGTGAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 90 bp | CACGGAACGTGTTTCTCACATCTATCTGGGTCATGCTGTGGCCGTTaGTTTGTTCTTGAGCTGTCTTCTAATTTGCAGTTCTCTGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HGTCFSHLSGSCCGR*FVLELSSNLQFSVS Trigger: TGAAACAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGATGTGAGAAACACGTTCCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACAGTTCTCTGACTCTGTaGCAAGGCCAAAGGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYSSLTL*QGQRRL Trigger: GAGCCTCCTTTGGCCTTGCCACAGAGTCAGAGAACT...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACCAGCAAGTAAGAAGGTaGAAGAGCCCACATGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYQQVRR*KSPHGS Trigger: GCTTCCATGTGGGCTCTTCCACCTTCTTACTTGCTG...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATGAGAGACCATTTATGCAGAACCGTTaGCAAGGTTCAGAATACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLILTPSQHEYKNTYERPFMQNR*QGSEYH Trigger: GTGGTATTCTGAACCTTGGCAACGGTTCTGCATAAA...TGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | AATCCAGCCTGTTTTATGCCCCAAGGAATACTTAGTATAGATGTTCCCATCATGTGGTCACTAACCCTCTaGATGACATCATTCACATTG | + |
|
Preference number: 2 (lower is better) Translates to: NPACFMPQGILSIDVPIMWSLTL*MTSFTL Trigger: CAATGTGAATGATGTCATTCAGAGGGTTAGTGACCA...CATGATGGGAACATCTATACTAAGTATTCCTTGGGGCATAAAACAGGCTGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCAGCCTGTTTTATGCCCCAAGGAATACTTAGTATAGATGTTCCCATCATGATAGGCAGAGCCCAATaGACTATACACATAGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: NPACFMPQGILSIDVPIMIGRAQ*TIHIAF Trigger: GAATGCTATGTGTATAGTCCATTGGGCTCTGCCTAT...CATGATGGGAACATCTATACTAAGTATTCCTTGGGGCATAAAACAGGCTGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR CAA 90 bp | CCTCTTACACAAGAGATAGACAGATCTGGATTCTGGTTTAGCTTTTaGTTCAGAAGGAAGATGGCAAGAGTGTTAAGTCTAAGAATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PLTQEIDRSGFWFSF*FRRKMARVLSLRIC Trigger: GCAGATTCTTAGACTTAACACTCTTGCCATCTTCCTTCTGAACAAAAAGCTAAACCAGAATCCAGATCTGTCTATCTCTTGTGTAAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACGTGGAACTGCACTTCTaGGACACATTTAATGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYVELHF*DTFNVD Trigger: GTCTACATTAAATGTGTCTCAGAAGTGCAGTTCCAC...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 90 bp | CAGGGCGGGTGCACAGCAGTTTTCCATATTATTCTATTTGTGCATTaGCTTGACGGTTTTCATAATGAGACTTTAGAAAGTGTTAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QGGCTAVFHIILFVH*LDGFHNETLESVRN Trigger: GTTTCTAACACTTTCTAAAGTCTCATTATGAAAACCGTCAAGCAAATGCACAAATAGAATAATATGGAAAACTGCTGTGCACCCGCCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACATTTGGTTTTACTGTTaGAGACAGTTGAGCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYIWFYC*RQLSFG Trigger: CCCAAAGCTCAACTGTCTCCAACAGTAAAACCAAAT...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 90 bp | AATTACAGCAATGACAGCATTTTCAAGTTCTTTTATGCAGAACCGTaGCCAAGGTTCAGAATACCACGAGAAATCTTGAGAAGAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: NYSNDSIFKFFYAEP*PRFRIPREILRREF Trigger: AAACTCTCTTCTCAAGATTTCTCGTGGTATTCTGAACCTTGGCAACGGTTCTGCATAAAAGAACTTGAAAATGCTGTCATTGCTGTAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACAAACAAGGACAAAAGTaGAAGGAGACAAAGTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYKQGQK*KETKSF Trigger: AAATGACTTTGTCTCCTTCCACTTTTGTCCTTGTTT...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | CCCCCTCTGCCACGCCGCCCACCCCCAAGGATTCGATaGTGCTCTCAAGGTGCTCCTCGAGGACATGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PPLPRRPPPRIR*CSQGAPRGHAC Trigger: GCACGCATGTCCTCGAGGAGCACCTTGAGAGCAGCATCGAATCCTTGGGGGTGGGCGGCGTGGCAGAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | CCTCTGCCACGCCGCCCACCCCCAAGGATTCGATGCTaGTCTCAAGGTGCTCCTCGAGGACATGCGTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLPRRPPPRIRC*SQGAPRGHACC Trigger: GCAGCACGCATGTCCTCGAGGAGCACCTTGAGAGCAGCATCGAATCCTTGGGGGTGGGCGGCGTGGCAGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | TGCCCCATGCCCACCCTAGAAACAACTGCTTTCCACTaGCCGGTTTTACACACGTGCCGCTCCCGACAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPMPTLETTAFH*PVLHTCRSRQV Trigger: GACCTGTCGGGAGCGGCACGTGTGTAAAACCGGGCAGTGGAAAGCAGTTGTTTCTAGGGTGGGCATGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | CCGCTCCCGACAGGTCACCTGAAGAGAAGCACGGGATaGTGTGTGTTTTGTACACCTGCCTGCGCTCACGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLPTGHLKRSTG*CVFCTPACAHG Trigger: TCCGTGAGCGCAGGCAGGTGTACAAAACACACACCATCCCGTGCTTCTCTTCAGGTGACCTGTCGGGAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | GGGTGTTGGCTCCTGGAGGCCACACCTGAACCAGGATaGCTCGGGCACACTGGGCAGATTCCTTTCCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GCWLLEATPEPG*LGHTGQIPFPF Trigger: AAAAGGGAAAGGAATCTGCCCAGTGTGCCCGAGTCATCCTGGTTCAGGTGTGGCCTCCAGGAGCCAACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | GGCTCCCATGCAGCCCAGTGGCCACGGGCGTTTCTGTaGGCCAGAGCTTTGGAGACTAGCTCCATGGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSHAAQWPRAFL*ARALETSSMVN Trigger: ATTTACCATGGAGCTAGTCTCCAAAGCTCTGGCTCACAGAAACGCCCGTGGCCACTGGGCTGCATGGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | TACGAGCCAGGACACACACTCGTGCGCAGAGTTCTCTaGCTCTGTGGCAAGGCCAAAGGAGGCTCATGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YEPGHTLVRRVL*LCGKAKGGSWG Trigger: TCCCCATGAGCCTCCTTTGGCCTTGCCACAGAGTCAGAGAACTCTGCGCACGAGTGTGTGTCCTGGCTCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | ACAGAGCACCAAGTGGGCAGGAGCCTGGCATCTCCGTaGCACATAAGGAAGGTGACTCAGTTGCTGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TEHQVGRSLASP*HIRKVTQLLGH Trigger: GTGACCCAGCAACTGAGTCACCTTCCTTATGTGCCACGGAGATGCCAGGCTCCTGCCCACTTGGTGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCATGGAAACGAGTCCCTaGCCTCTGAGCAGCCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRMPLLHANLTWICLGAFMETSP*PLSSPS Trigger: GGAGGGGCTGCTCAGAGGCAAGGGACTCGTTTCCAT...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | AACACTCCCTGCTGCTACCAACTGTGGGGGTTTCAGTaGGGAACTCTGAGTGTGCGGCTGAACACACGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: NTPCCYQLWGFQ*GTLSVRLNTRH Trigger: GTGGCGTGTGTTCAGCCGCACACTCAGAGTTCCTCACTGAAACCCCCACAGTTGGTAGCAGCAGGGAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | CCCCTCCATTCTCATACGAGCCAGGACACACACTCGTaGGCAGAGTTCTCTGACTCTGTGGCAAGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLHSHTSQDTHS*AEFSDSVARPK Trigger: CTTTGGCCTTGCCACAGAGTCAGAGAACTCTGCGCACGAGTGTGTGTCCTGGCTCGTATGAGAATGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | TCTGAGTGTGCGGCTGAACACACGCCACAGCTGGTTTaGGGAGGATCTGGAGCTCTCAGGAAACAGTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SECAAEHTPQLV*GGSGALRKQCY Trigger: GTAGCACTGTTTCCTGAGAGCTCCAGATCCTCCCCAAACCAGCTGTGGCGTGTGTTCAGCCGCACACTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | TGGGGAGGTGTCAGAACAGCGCAGCTCATCCCTGCTTaGGAACCGCAAGGCAGAGTCTGTGATAAACACCGT | + |
|
Preference number: 3 (lower is better) Translates to: WGGVRTAQLIPA*EPQGRVCDKHR Trigger: ACGGTGTTTATCACAGACTCTGCCTTGCGGTTCCCAAGCAGGGATGAGCTGCGCTGTTCTGACACCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | CTGAATATTACTGGACTGATGGGGACTGAGTGGGGGTaGGGAGGTGTCAGAACAGCGCAGCTCATCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNITGLMGTEWG*GGVRTAQLIPA Trigger: AGCAGGGATGAGCTGCGCTGTTCTGACACCTCCCCACCCCCACTCAGTCCCCATCAGTCCAGTAATATTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | CATAAGGAAGGTGACTCAGTTGCTGGGTCACAAGGGTaGACAAAGGATGCTCCTCCACCGGGGCCACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: HKEGDSVAGSQG*TKDAPPPGPHL Trigger: AAGGTGTGGCCCCGGTGGAGGAGCATCCTTTGTCCACCCTTGTGACCCAGCAACTGAGTCACCTTCCTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGTACTGTTGGAGACAGTaGAGCTTTGGGCAAACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRVGPAGSVHFASQTGRMYCWRQ*SFGQTG Trigger: CCCAGTTTGCCCAAAGCTCAACTGTCTCCAACAGTA...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | AGGGACGACATGGTCTGGAGCAATCAGTGCCTTGTCTaGAGGAGTGGTGAGCCGGCTGTAGTAATGAATCCG | + |
|
Preference number: 3 (lower is better) Translates to: RDDMVWSNQCLV*RSGEPAVVMNP Trigger: CGGATTCATTACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCTCCAGACCATGTCGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR CCA 72 bp | AGGACACACACTCGTGCGCAGAGTTCTCTGACTCTGTaGCAAGGCCAAAGGAGGCTCATGGGGAAAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTHTRAQSSLTL*QGQRRLMGKTR Trigger: CCTTGTTTTCCCCATGAGCCTCCTTTGGCCTTGCCACAGAGTCAGAGAACTCTGCGCACGAGTGTGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | GCTCCCGGACACACCAGCCACCTCACTGGCCCTAGCTaGCACATAGCTTCTGACGGACTGACACTATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: APGHTSHLTGPS*HIASDGLTLFK Trigger: TTTAAATAGTGTCAGTCCGTCAGAAGCTATGTGTCAGCTAGGGCCAGTGAGGTGGCTGGTGTGTCCGGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | TCTCCTAGATGCAGATGCAACGTGATTGGCCAGCCCTaGTTTGGAGCCTGTTTCCAAGCCTTCCTGGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SPRCRCNVIGQP*FGACFQAFLGI Trigger: AATGCCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCATCTGCATCTAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | GGCAGAGCCCAATGGACTATACACATAGCATTCCTCTaGAGCAGGGACGACATGGTCTGGAGCAATCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRAQWTIHIAFL*SRDDMVWSNQC Trigger: GCACTGATTGCTCCAGACCATGTCGTCCCTGCTCCAGAGGAATGCTATGTGTATAGTCCATTGGGCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR TCA 72 bp | GGTGAAGGAAAGAGATGCAAAGCTCAGGGCCATCGCTaGCTACATAATGGGTTCAAAGCCAGGAGAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GEGKRCKAQGHR*LHNGFKARRAC Trigger: GCAGGCTCTCCTGGCTTTGAACCCATTATGTAGTCAGCGATGGCCCTGAGCTTTGCATCTCTTTCCTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | GCTCTCTGGAGACAGGCAGGACGAGCACCACAAATTTaGGGCCAGACAGGAGTACACAATCAAGGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALWRQAGRAPQI*GQTGVHNQGSF Trigger: GAAAGAGCCTTGATTGTGTACTCCTGTCTGGCCTCAAATTTGTGGTGCTCGTCCTGCCTGTCTCCAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAATCAGTGCCTTGTCTGCAGGAGTGGTGAGCCGGCTGTAGTAATGAATCCGGCCAGTTTAGTTGGCTaGGGTACTCTGAGAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SNQCLVCRSGEPAVVMNPASLVG*GTLRTE Trigger: TTCTGTTCTCAGAGTACCCAAGCCAACTAAACTGGC...CGGATTCATTACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR TCA 72 bp | CACTGTACTCTTGATCTCCTAGATGCAGATGCAACGTaGTTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HCTLDLLDADAT*LASPALEPVSK Trigger: CTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCATCTGCATCTAGGAGATCAAGAGTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | TTCACCGGGAGAGGCACAGTCAGTCTCAGGCGAAGCTaGGTTCTAGTAGTACTGGGAAAAACGATGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FTGRGTVSLRRS*VLVVLGKTMLF Trigger: GAAGAGCATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCTCTCCCGGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | CTGGGCAGATTCCTTTCCCTTTTGAAGAGCCTCACATaGCCATCTCCACTTGTGCTTCTTCCATTGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGRFLSLLKSLT*PSPLVLLPLGF Trigger: GAAGCCCAATGGAAGAAGCACAAGTGGAGATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATCTGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | CAGAGAAACTCAGGTCACAGAGAAACTCAGGCCTGGTaGCCACTACTCTTCCTCCGGTTTCTTACACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QRNSGHRETQAW*PLLFLRFLTLP Trigger: AGGAAGTGTAAGAAACCGGAGGAAGAGTAGTGGGCACCAGGCCTGAGTTTCTCTGTGACCTGAGTTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | GCTGATGGGGATGGGCTCCTTAGGTCCCCGTTAACGTaGCATATACCTTTCCAGAAGATCAGGACATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ADGDGLLRSPLT*HIPFQKIRTFK Trigger: CTTGAATGTCCTGATCTTCTGGAAAGGTATATGTCACGTTAACGGGGACCTAAGGAGCCCATCCCCATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACTTGTGCTTCTTCCATTGGGCTTCATGACAGTCCATGCAGTTCTCAAGCGAGGACAACTGCTTTaGTTCAGGTGTGAGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPLVLLPLGFMTVHAVLKRGQLL*FRCEIW Trigger: CCAGATCTCACACCTGAACAAAAGCAGTTGTCCTCG...CTTGAGAACTGCATGGACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | AGAAGATCAGGACATTCAAGAAGGCCCCTGACAGCCTaGCATGGGACACAGCCACAGTCACTTAAGAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RRSGHSRRPLTA*HGTQPQSLKKF Trigger: GAATTTCTTAAGTGACTGTGGCTGTGTCCCATGTCAGGCTGTCAGGGGCCTTCTTGAATGTCCTGATCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | GAAGCATTTCCCTTTAAAACAGCCTCTTCCAGGGGCTaGAATGACGTAGTCCTCCTTCCAAGCACATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EAFPFKTASSRG*NDVVLLPSTFL Trigger: CAGAAATGTGCTTGGAAGGAGGACTACGTCATTGCAGCCCCTGGAAGAGGCTGTTTTAAAGGGAAATGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATCTCAGAGAATTCTGTTaGCACGCTGAGGTTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDLREFC*HAEVPI Trigger: AATGGGAACCTCAGCGTGCAAACAGAATTCTCTGAG...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACACCAGAGGCATGTGCATaGCTGACTATTCAGTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: PDLDLFGGIQAGVKLSETPEACA*LTIQLL Trigger: CAATAACTGAATAGTCAGCAATGCACATGCCTCTGG...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATAATGCCACAGTTAACTaGGAACATGGAGGCGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDNATVN*EHGGVL Trigger: TAAAACGCCTCCATGTTCCAAGTTAACTGTGGCATT...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTTATGCCCCAAGGAATACTTAGTATAGATGTTCCCATCATGGTATTCCAAGGAGCAATCAGTGCCTaGTCTGCAGGAGTGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CFMPQGILSIDVPIMVFQGAISA*SAGVVS Trigger: GCTCACCACTCCTGCAGACAAGGCACTGATTGCTCC...TTGGAATACCATGATGGGAACATCTATACTAAGTATTCCTTGGGGCATAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR TCA 72 bp | GTGTTCTTTATTAGCGCTGAAGGCTCTGGAAAGTTATaGCTTTTCCAGGGCTTTTGGCCAGAAACTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VFFISAEGSGKL*LFQGFWPETGQ Trigger: TTGCCCAGTTTCTGGCCAAAAGCCCTGGAAAAGTCATAACTTTCCAGAGCCTTCAGCGCTAATAAAGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | AGGTATTTGGTTTTACTGTTGGAGACAGTTGAGCTTTaGGCAAACTGGGGAAATGGCCCAGCAAGTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RYLVLLLETVEL*ANWGNGPASKK Trigger: CTTCTTACTTGCTGGGCCATTTCCCCAGTTTGCCCAAAGCTCAACTGTCTCCAACAGTAAAACCAAATACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CCA 72 bp | TTCAGTGTAACTCTTGAGTTTATAGGCAGAGCCCAATaGACTATACACATAGCATTCCTCTGGAGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSVTLEFIGRAQ*TIHIAFLWSRD Trigger: GTCCCTGCTCCAGAGGAATGCTATGTGTATAGTCCATTGGGCTCTGCCTATAAACTCAAGAGTTACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR CCA 72 bp | GACAACAAAAGCATGAATCCGTATTACTTTTTCGGCTaGAGGGTAGCATCCTTTGCCGGTTGGTTACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DNKSMNPYYFFG*RVASFAGWLPF Trigger: AAAAGGTAACCAACCGGCAAAGGATGCTACCCTCCAGCCGAAAAAGTAATACGGATTCATGCTTTTGTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | ACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATaGGAGACCATCATTTCCCTCGCTTTCAATTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TYALPARVQKYL*ETIISLAFNYL Trigger: AAGATAATTGAAAGCGAGGGAAATGATGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR TCA 72 bp | AGCTGGTGTTTTTACCATAGCCTTCAGTGTAACTCTTaGGTTTATAGGCAGAGCCCAATGGACTATACACAT | + |
|
Preference number: 3 (lower is better) Translates to: SWCFYHSLQCNS*VYRQSPMDYTH Trigger: ATGTGTATAGTCCATTGGGCTCTGCCTATAAACTCAAGAGTTACACTGAAGGCTATGGTAAAAACACCAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| 3UTR CCA 72 bp | AAAACAAGGACAAAAGTGGAAGGAGACAAAGTCATTTaGCTTGTCCAACAGGACATCAGGAAGAGGTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTRTKVEGDKVI*LVQQDIRKRSK Trigger: TTTAGACCTCTTCCTGATGTCCTGTTGGACAAGCCAAATGACTTTGTCTCCTTCCACTTTTGTCCTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | GTGTTCATATTTGTTAAGCTCCAAGCTCCCTTCCCATaGATATGTCTAAACAAAGGTTTCAAACTTCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: VFIFVKLQAPFP*ICLNKGFKLHA Trigger: TGCGTGAAGTTTGAAACCTTTGTTTAGACATATGCATGGGAAGGGAGCTTGGAGCTTAACAAATATGAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACAGCATCCTTTGCCGGTaGGTTACCTTTTATCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYSILCR*VTFYLL Trigger: TAAAAGATAAAAGGTAACCAACCGGCAAAGGATGCT...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACAGGAAGAGGTCTAAATaGTTCAGTGTCCTTAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYRKRSK*FSVLKT Trigger: TGTCTTAAGGACACTGAACAATTTAGACCTCTTCCT...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | AGTGTATTACTAATTACCTCCCACATTAAGCAATTATaGTTTCTGTCCAAGAGCCACAGGAAATCAATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SVLLITSHIKQL*FLSKSHRKSIL Trigger: CAGTATTGATTTCCTGTGGCTCTTGGACAGAAAGCATAATTGCTTAATGTGGGAGGTAATTAGTAATACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR GCA 72 bp | TATAAAAAGACAAATAACATCTCAGAGAATTCTGTTTaGACGCTGAGGTTCCCATTAGAGCTGTTTATACAA | + |
|
Preference number: 3 (lower is better) Translates to: YKKTNNISENSV*TLRFPLELFIQ Trigger: TTGTATAAACAGCTCTAATGGGAACCTCAGCGTGCAAACAGAATTCTCTGAGATGTTATTTGTCTTTTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCCTCGAGCACGGGCTCCCATGCAGCCCAGTGGCCACGGGCGTTTCTGTCACATAGCATTCCTCTaGAGCAGGGACGACATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVPRARAPMQPSGHGRFCHIAFL*SRDDMV Trigger: GACCATGTCGTCCCTGCTCCAGAGGAATGCTATGTG...ACAGAAACGCCCGTGGCCACTGGGCTGCATGGGAGCCCGTGCTCGAGGAACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCGTCTGGAGCAATCAGTaGCTTGTCTGCAGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRMPLLHANLTWICLGAFVWSNQ*LVCRSG Trigger: ACCACTCCTGCAGACAAGGCACTGATTGCTCCAGAC...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGACAGGATGTCACTGCTaGGGAAGTTGTCTAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVGPAGSVHFASQTGRMTGCHC*GSCLRS Trigger: ACTTCTTAGACAACTTCCCCAGCAGTGACATCCTGT...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | GATGACTCGGGCACACTGGGCAGATTCCTTTCCCTTTaGAAGAGCCTCACATGCCCATCTCCACTTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DDSGTLGRFLSL*KSLTCPSPLVL Trigger: AAGCACAAGTGGAGATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATCTGCCCAGTGTGCCCGAGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGCCAATAAACTATCATTaGTCCAATGAGCGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVGPAGSVHFASQTGRMPINYH*SNERHQ Trigger: TTGGTGTCGCTCATTGGAGCAATGATAGTTTATTGG...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCCAGAGAGAAGATGCCTaGAATCACCATCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRMPLLHANLTWICLGAFQREDA*NHHPHL Trigger: CAAGTGTGGATGGTGATTCCAGGCATCTTCTCTCTG...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTGGAGCAATCAGTGCCTTGTCTGCAGGAGTGGTGAGCCGGCTGTAGTATCTGATGAATCAAACTaGATGTTCATAGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVWSNQCLVCRSGEPAVVSDESN*MFIGPG Trigger: CCCTGGGCCTATGAACATCCAGTTTGATTCATCAGA...TACTACAGCCGGCTCACCACTCCTGCAGACAAGGCACTGATTGCTCCAGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| CDS-3UTR CCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCACCACTGCCAGCATTTaGACATATCACAGGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRMPLLHANLTWICLGAFTTASI*TYHRVA Trigger: AGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGT...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | AGCTCTCTGGAGACAGGCAGGACGAGCACCACAAATTaGAGGCCAGACAGGAGTACACAATCAAGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLETGRTSTTN*RPDRSTQSRLF Trigger: AAAGAGCCTTGATTGTGTACTCCTGTCTGGCCTCAAATTTGTGGTGCTCGTCCTGCCTGTCTCCAGAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGTGTCTGCAGGAGTGGTaGGCCGGCTGTAGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARCLQEW*AGCSNE Trigger: TTCATTACTACAGCCGGCTCACCACTCCTGCAGACA...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACATGGAGGCGAAGGGAATaGGGCAAAAACCAGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: PDLDLFGGIQAGVKLSETWRRRE*GKNQDT Trigger: GGTATCCTGGTTTTTGCCTCATTCCCTTCGCCTCCA...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGAGGGACGACATGGTCTaGAGCAATCAGTGCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARRDDMV*SNQCLV Trigger: GACAAGGCACTGATTGCTCCAGACCATGTCGTCCCT...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATGGTAGAAACAGGCCATaGTCACTCCAGCTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDGRNRP*SLQLPQ Trigger: TTGTGGGAGCTGGAGTGACCATGGCCTGTTTCTACC...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | TCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTaGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHALVTRQPDLD*FGGIQAGVKLS Trigger: ACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | TCAGTTCACTTTGCATCACAGACTGGTCGCATGCCCTaGTTACACGCCAACCTGACTTGGATTTGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVHFASQTGRMP*LHANLTWICLG Trigger: CCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACCAGTCTGTGATGCAAAGTGAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | AGCACGATGACACACATCCCAGTGGTAAATCCAGCCTGTTTTATGCCCCAAGGACAGAGAGAAGATGCCTaGAATCACCATCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: STMTHIPVVNPACFMPQGQREDA*NHHPHL Trigger: CAAGTGTGGATGGTGATTCCAGGCATCTTCTCTCTG...TCCTTGGGGCATAAAACAGGCTGGATTTACCACTGGGATGTGTGTCATCGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| CDS-3UTR CCA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCATAGGCAGAGCCCAATaGACTATACACATAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GRMPLLHANLTWICLGAFIGRAQ*TIHIAF Trigger: GAATGCTATGTGTATAGTCCATTGGGCTCTGCCTAT...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | CACACTGGGCAGATTCCTTTCCCTTTTGAAGAGCCTCACATGCCCATCTCCACTCAGGGTTGCTATTATTaGTGCTCAGTACAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGQIPFPFEEPHMPISTQGCYY*CSVQCL Trigger: CAGACACTGTACTGAGCACCAATAATAGCAACCCTG...AGTGGAGATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATCTGCCCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGATGTCACCGAAGATATaGCCCAAGAGCTGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARMSPKI*PKSWTR Trigger: TCGTGTCCAGCTCTTGGGCCATATCTTCGGTGACAT...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGGGAATATCCTTGCAATaGAGGACAGGATGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARGISLQ*RTGCHC Trigger: GCAGTGACATCCTGTCCTTCATTGCAAGGATATTCC...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATCTCCCGAATACCTTATaGTCCCTCCTATGTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDLPNTL*SLLCLG Trigger: ACCCAAACATAGGAGGGATCATAAGGTATTCGGGAG...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | TCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATGAGAGACCAAATCAGTGCCTTGTCTaGAGGAGTGGTGAGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLILTPSQHEYKNTYERPNQCLV*RSGEPA Trigger: AGCCGGCTCACCACTCCTGCAGACAAGGCACTGATT...TGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACAAGGACAGGATGTCACTaGTGGGGAAGTTGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDLDLFGGIQAGVKLSETRTGCH*WGSCLR Trigger: TCTTAGACAACTTCCCCAGCAGTGACATCCTGTCCT...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | AGCACATTTCTGGAGTGTGCTGATGGCAATGACTTGGCACAACCATCCATGCCCGTTCAATACAATCTTTaGGTAATGGAGGCGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STFLECADGNDLAQPSMPVQYNL*VMEAKG Trigger: TCCCTTCGCCTCCATTACCCAAAGATTGTATTGAAC...GGGCATGGATGGTTGTGCCAAGTCATTGCCATCAGCACACTCCAGAAATGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACAGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDLDLFGGIQAGVKLSETDPSYV*VETGHG Trigger: ACCATGGCCTGTTTCTACCCAAACATAGGAGGGATC...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATCTATCATTGCTCCAATaGGCGACACCAAGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDLSLLQ*ATPRRK Trigger: TTTTCTCCTTGGTGTCGCTCATTGGAGCAATGATAG...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | CACACTGGGCAGATTCCTTTCCCTTTTGAAGAGCCTCACATGCCCATCTCCACTGACATATCACAGGGTTaGTATTATTGGTGCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTGQIPFPFEEPHMPISTDISQG*YYWCSV Trigger: TACTGAGCACCAATAATAGCAACCCTGTGATATGTC...AGTGGAGATGGGCATGTGAGGCTCTTCAAAAGGGAAAGGAATCTGCCCAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGGTGAGCCGGCTGTAGTAATGAATCCGCTTGTTCATAGCAGCAGCATGCATCGAGATGTTGAGTaGCTTTTAGATCTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSGEPAVVMNPLVHSSSMHRDVE*LLDLRS Trigger: AGATCTGAGATCTAAAAGGCACTCAACATCTCGATG...CATGCTGCTGCTATGAACAAGCGGATTCATTACTACAGCCGGCTCACCACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| CDS-3UTR CCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGTCTGATGAATCAAACTaGATGTTCATAGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARSDESN*MFIGPG Trigger: CCCTGGGCCTATGAACATCCAGTTTGATTCATCAGA...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATGAGAGACCAAGAAGGGCACTGTCCTaGACTTGTCCCACCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLILTPSQHEYKNTYERPRRALS*TCPTTS Trigger: AGAAGTGGTGGGACAAGTCCAGGACAGTGCCCTTCT...TGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCACTTGTGCTTCTTCCATTGGGCTTCATGACAGTCCATGCAGTTCTCAAGTGGTCACTAACCCTCTaGATGACATCATTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLVLLPLGFMTVHAVLKWSLTL*MTSFTL Trigger: CAATGTGAATGATGTCATTCAGAGGGTTAGTGACCA...CTTGAGAACTGCATGGACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACAGTGATGATGCAGTTGTaGATAAAGAAGGCCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDLDLFGGIQAGVKLSETVMMQL*IKKARV Trigger: TACTCTGGCCTTCTTTATTCACAACTGCATCATCAC...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | TCTCCACTTGTGCTTCTTCCATTGGGCTTCATGACAGTCCATGCAGTTCTCAAGGGTTGCTATTATTGGTaGTCAGTACAGTGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLVLLPLGFMTVHAVLKGCYYW*SVQCLC Trigger: ACACAGACACTGTACTGAGCACCAATAATAGCAACC...CTTGAGAACTGCATGGACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | CCTGACTTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTTGAGTGAGACATGTTGTAGAAAATCATaGAACTGTTGTCAGGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDLDLFGGIQAGVKLSETCCRKS*NCCQDG Trigger: GCCGTCCTGACAACAGTTCCATGATTTTCTACAACA...TGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAAGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATATGATGATGATAACGTaGAACACCAACTTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDMMMIT*NTNLGH Trigger: ATGGCCTAAGTTGGTGTTTCACGTTATCATCATCAT...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | TTGGATTTGTTTGGGGGCATTCAAGCTGGTGTGAAGTaGAGTGAGACACAAAATCCAAATCGCCACCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLFGGIQAGVK*SETQNPNRHQL Trigger: AAGTTGGTGGCGATTTGGATTTTGTGTCTCACTCAACTTCACACCAGCTTGAATGCCCCCAAACAAATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | TCTCACATCTATCTGGGTCATGCTGTGGCCGTTTGTTaGTTCTTGAGCTGTCTTCTAATTTGCAGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHIYLGHAVAVC*FLSCLLICSSL Trigger: CAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGATGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGAGCCAAAATAATGTTTaGAGACATCTGGATATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARSQNNV*RHLDIP Trigger: GGGAATATCCAGATGTCTGCAAACATTATTTTGGCT...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | GCCACAGGAAATCAATACTGCAGGGATCATCAAGAAGAAAGAAGAACAGCCCGGCCAGCATATAAGCAATaGATAGGTCTCTCACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: ATGNQYCRDHQEERRTARPAYKQ*IGLSHY Trigger: ATAATGTGAGAGACCTATGCATTGCTTATATGCTGG...CCGGGCTGTTCTTCTTTCTTCTTGATGATCCCTGCAGTATTGATTTCCTGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | AGGCACAGTCAGTCTCAGGCGAAGCTGAGTTCTAGTAGTACTGGGAAAAACGATTATACAGTCATCATCTaGAACAGCAGGAATATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHSQSQAKLSSSSTGKNDYTVII*NSRNIL Trigger: AAGGATATTCCTGCTGTTCCAGATGATGACTGTATA...ATCGTTTTTCCCAGTACTACTAGAACTCAGCTTCGCCTGAGACTGACTGTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | TGTTTCTCACATCTATCTGGGTCATGCTGTGGCCGTTaGTTTGTTCTTGAGCTGTCTTCTAATTTGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFSHLSGSCCGR*FVLELSSNLQF Trigger: GAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGATGTGAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR GCA 90 bp | TCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATGAGAGACCACACTTCTCAAACAGCTaGACTTCTGTGTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLILTPSQHEYKNTYERPHFSNS*TSVLLL Trigger: CAACAACAACACAGAAGTGCAGCTGTTTGAGAAGTG...TGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTAATACTTACGCCCTCCCAGCACGAGTACAAAAATACTTATGAGAGACCAATGTTTGCAGACATCTaGATATTCCCAGGTACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLILTPSQHEYKNTYERPMFADI*IFPGTR Trigger: ACGAGTACCTGGGAATATCCAGATGTCTGCAAACAT...TGGTCTCTCATAAGTATTTTTGTACTCGTGCTGGGAGGGCGTAAGTATTAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | ATCTATCTGGGTCATGCTGTGGCCGTTTGTTTGTTCTaGAGCTGTCTTCTAATTTGCAGTTCTCTGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYLGHAVAVCLF*SCLLICSSLFQ Trigger: TTGAAACAGAGAACTGCAAATTAGAAGACAGCTCAAGAACAAACAAACGGCCACAGCATGACCCAGATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | ATAGAAGGTACAGCTAGAGGTAATGAGTGTTCATATTaGTTAAGCTCCAAGCTCCCTTCCCATGCATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEGTARGNECSY*LSSKLPSHAYV Trigger: GACATATGCATGGGAAGGGAGCTTGGAGCTTAACAAATATGAACACTCATTACCTCTAGCTGTACCTTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACCTTCAGTGTAACTCTTaGGTTTATAGGCAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYLQCNS*VYRQSP Trigger: TGGGCTCTGCCTATAAACTCAAGAGTTACACTGAAG...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | AGTGTTAAGTCTAAGAATCTGCATTTCTCAGTCATCTaGTCAGAAGCTTTTCTTGTGAGACCTAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKSKNLHFSVI*SEAFLVRPNSS Trigger: AGAAGAGTTAGGTCTCACAAGAAAAGCTTCTGACAAGATGACTGAGAAATGCAGATTCTTAGACTTAACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| 3UTR CAA 72 bp | ATACCCTATTCGGATCCCAAATTAACCATTACTAGATaGGCACGTAATCTAGCCTTTCCAGAAATAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPYSDPKLTITR*ARNLAFPEIKA Trigger: AGCTTTTATTTCTGGAAAGGCTAGATTACGTGCCAATCTAGTAATGGTTAATTTGGGATCCGAATAGGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCCTCGAGCACGGGCTCCCATGCAGCCCAGTGGCCACGGGCGTTTCTGTGAAGGAGACTTGAAGTaGAGCAGCGGCAAGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPRARAPMQPSGHGRFCEGDLK*SSGKRS Trigger: GCTCCTCTTGCCGCTGCTCAACTTCAAGTCTCCTTC...ACAGAAACGCCCGTGGCCACTGGGCTGCATGGGAGCCCGTGCTCGAGGAACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGAAAATCATGGAACTGTaGTCAGGACGGCCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVGPAGSVHFASQTGRMKIMEL*SGRPPL Trigger: CAGTGGTGGCCGTCCTGACAACAGTTCCATGATTTT...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGAGGAGAAAAGGAGACTaGACCATTGCCCAAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MQRDWPALLWSLFPSLPGRRKGD*TIAQRS Trigger: GCTCCTTTGGGCAATGGTCAAGTCTCCTTTTCTCCT...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | CTTCGAGTGGGGCCAGCCGGGTCAGTTCACTTTGCATCACAGACTGGTCGCATGACAGGGTTGCTATTATaGGTGCTCAGTACAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVGPAGSVHFASQTGRMTGLLL*VLSTVS Trigger: AGACACTGTACTGAGCACCAATAATAGCAACCCTGT...CATGCGACCAGTCTGTGATGCAAAGTGAACTGACCCGGCTGGCCCCACTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | AGCACATTTCTGGAGTGTGCTGATGGCAATGACTTGGCACAACCATCCATGCCCGGCACTGTCCTGGACTaGTCCCACCACTTCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: STFLECADGNDLAQPSMPGTVLD*SHHFSN Trigger: GTTTGAGAAGTGGTGGGACAAGTCCAGGACAGTGCC...GGGCATGGATGGTTGTGCCAAGTCATTGCCATCAGCACACTCCAGAAATGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | ATGCAACGTGATTGGCCAGCCCTGCTTTGGAGCCTGTTTCCAAGCCTTCCTGGGTGTTCAATACAATCTTaGGGTAATGGAGGCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MQRDWPALLWSLFPSLPGCSIQS*GNGGEG Trigger: CCCTTCGCCTCCATTACCCAAAGATTGTATTGAACA...CCCAGGAAGGCTTGGAAACAGGCTCCAAAGCAGGGCTGGCCAATCACGTTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCAAGAATGAAGGAGACTaGAAGTTGAGCAGCGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRMPLLHANLTWICLGAFKNEGD*KLSSGK Trigger: CTTGCCGCTGCTCAACTTCAAGTCTCCTTCATTCTT...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CAA 90 bp | GGTCGCATGCCCTTGTTACACGCCAACCTGACTTGGATTTGTTTGGGGGCATTCTGTCAGACGCTCCTCTaGGTGAAGGGAGATTATATA | + |
|
Preference number: 5 (lower is better) Translates to: GRMPLLHANLTWICLGAFCQTLL*VKGDYI Trigger: TATATAATCTCCCTTCACCAAGAGGAGCGTCTGACA...GAATGCCCCCAAACAAATCCAAGTCAGGTTGGCGTGTAACAAGGGCATGCGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS-3UTR CAA 90 bp | TTTAGAGGGGATCTGCAAAACCCACAGAAGCAAATACATGTAACATATCTCTACGGAGCAATCAGTGCCTaGTCTGCAGGAGTGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRGDLQNPQKQIHVTYLYGAISA*SAGVVS Trigger: GCTCACCACTCCTGCAGACAAGGCACTGATTGCTCC...GTAGAGATATGTTACATGTATTTGCTTCTGTGGGTTTTGCAGATCCCCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS-3UTR CAA 90 bp | TCTCCACTTGTGCTTCTTCCATTGGGCTTCATGACAGTCCATGCAGTTCTCAAGGGACATATCACAGGGTaGCTATTATTGGTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPLVLLPLGFMTVHAVLKGHITG*LLLVLS Trigger: ACTGAGCACCAATAATAGCAACCCTGTGATATGTCC...CTTGAGAACTGCATGGACTGTCATGAAGCCCAATGGAAGAAGCACAAGTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS TCA 90 bp | ATAGAGGACAGACACCGTTCCCAGGATATTAAATTTGGAGAAGAATaGAGGAGACTTGAAGTTGAGCAGCGGCAAGAGGAGCCCTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: IEDRHRSQDIKFGEE*RRLEVEQRQEEPYK Trigger: CTTATAGGGCTCCTCTTGCCGCTGCTCAACTTCAAGTCTCCTTCATTCTTCTCCAAATTTAATATCCTGGGAACGGTGTCTGTCCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS TCA 90 bp | GCGGATATACAGTCATCATCTGGAACAGCAGGAATATCCTTGCAATaGAGGACAGGATGTCACTGCTGGGGAAGTTGTCTAAGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ADIQSSSGTAGISLQ*RTGCHCWGSCLRSS Trigger: AGAACTTCTTAGACAACTTCCCCAGCAGTGACATCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTCCAGATGATGACTGTATATCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS GCA 90 bp | TGTTGTTGTAGAAAATCATGGAACTGTTGTCAGGACGGCCACCACTaGCAGCATTTGGACATATCACAGGGTTGCTATTATTGGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCCRKSWNCCQDGHH*QHLDISQGCYYWCS Trigger: TGAGCACCAATAATAGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGTGGCCGTCCTGACAACAGTTCCATGATTTTCTACAACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS CCA 90 bp | ACTTCTCAAACAGCTGCACTTCTGTGTTGTTGTTGTAGAAAATCATaGAACTGTTGTCAGGACGGCCACCACTGCCAGCATTTGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: TSQTAALLCCCCRKS*NCCQDGHHCQHLDI Trigger: TATGTCCAAATGCTGGCAGTGGTGGCCGTCCTGACAACAGTTCCATGATTTTCTACAACAACAACACAGAAGTGCAGCTGTTTGAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS CCA 90 bp | CGAGATGTTGAGTGCCTTTTAGATCTCAGATCTGATGAATCAAACTaGATGTTCATAGGCCCAGGGCTTACTTCATGTTCCACCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDVECLLDLRSDESN*MFIGPGLTSCSTSE Trigger: CTCTGAGGTGGAACATGAAGTAAGCCCTGGGCCTATGAACATCCAGTTTGATTCATCAGATCTGAGATCTAAAAGGCACTCAACATCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223581.2 |
||
| CDS TCA 90 bp | AACTATCATTGCTCCAATGAGCGACACCAAGGAGAAAAGGAGACTTaGCCATTGCCCAAAGGAGCCAAAATAATGTTTGCAGACATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NYHCSNERHQGEKET*PLPKGAKIMFADIW Trigger: CCAGATGTCTGCAAACATTATTTTGGCTCCTTTGGGCAATGGTCAAGTCTCCTTTTCTCCTTGGTGTCGCTCATTGGAGCAATGATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS GCA 90 bp | AGAAAAGGAGACTTGACCATTGCCCAAAGGAGCCAAAATAATGTTTaGAGACATCTGGATATTCCCAGGTACTCGTGTCCGATGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: RKGDLTIAQRSQNNV*RHLDIPRYSCPMYL Trigger: TAAGTACATCGGACACGAGTACCTGGGAATATCCAGATGTCTGCAAACATTATTTTGGCTCCTTTGGGCAATGGTCAAGTCTCCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS TCA 72 bp | CGAAAGCCAGGCCGCATGCTGCTCCCGAATACCTTATaGTCCCTCCTATGTTTGGGTAGAAACAGGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RKPGRMLLPNTL*SLLCLGRNRPW Trigger: CCATGGCCTGTTTCTACCCAAACATAGGAGGGATCATAAGGTATTCGGGAGCAGCATGCGGCCTGGCTTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS CCA 72 bp | TGCTGCTCCCGAATACCTTATGATCCCTCCTATGTTTaGGTAGAAACAGGCCATGGTCACTCCAGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CCSRIPYDPSYV*VETGHGHSSSH Trigger: GTGGGAGCTGGAGTGACCATGGCCTGTTTCTACCCAAACATAGGAGGGATCATAAGGTATTCGGGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS GCA 72 bp | GAGAGACGGGTATATGAACACGAAAGCCAGGCCGCATaGTGCTCCCGAATACCTTATGATCCCTCCTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: ERRVYEHESQAA*CSRIPYDPSYV Trigger: AACATAGGAGGGATCATAAGGTATTCGGGAGCAGCATGCGGCCTGGCTTTCGTGTTCATATACCCGTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS CAA 72 bp | CGGCCACCACTGCCAGCATTTGGACATATCACAGGGTaGCTATTATTGGTGCTCAGTACAGTGTCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPPLPAFGHITG*LLLVLSTVSVS Trigger: TGACACAGACACTGTACTGAGCACCAATAATAGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGTGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS CAA 72 bp | TGGAACTGTTGTCAGGACGGCCACCACTGCCAGCATTaGGACATATCACAGGGTTGCTATTATTGGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WNCCQDGHHCQH*DISQGCYYWCS Trigger: TGAGCACCAATAATAGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGTGGCCGTCCTGACAACAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS TCA 72 bp | ATCAGGTTCGCCAGGCCCAAAATGATGATGATAACGTaGAACACCAACTTAGGCCATGTCAGACGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IRFARPKMMMIT*NTNLGHVRRSS Trigger: AGAGGAGCGTCTGACATGGCCTAAGTTGGTGTTTCACGTTATCATCATCATTTTGGGCCTGGCGAACCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS GCA 72 bp | GGCCACCACTGCCAGCATTTGGACATATCACAGGGTTaGTATTATTGGTGCTCAGTACAGTGTCTGTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHHCQHLDISQG*YYWCSVQCLCH Trigger: ATGACACAGACACTGTACTGAGCACCAATAATAGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
||
| CDS TCA 72 bp | CAGTCATCATCTGGAACAGCAGGAATATCCTTGCAATaGAGGACAGGATGTCACTGCTGGGGAAGTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: QSSSGTAGISLQ*RTGCHCWGSCL Trigger: TAGACAACTTCCCCAGCAGTGACATCCTGTCCTTCATTGCAAGGATATTCCTGCTGTTCCAGATGATGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS GCA 72 bp | GACTTGACCATTGCCCAAAGGAGCCAAAATAATGTTTaGAGACATCTGGATATTCCCAGGTACTCGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: DLTIAQRSQNNV*RHLDIPRYSCP Trigger: CGGACACGAGTACCTGGGAATATCCAGATGTCTGCAAACATTATTTTGGCTCCTTTGGGCAATGGTCAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS TCA 72 bp | AGACACCGTTCCCAGGATATTAAATTTGGAGAAGAATaGAGGAGACTTGAAGTTGAGCAGCGGCAAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RHRSQDIKFGEE*RRLEVEQRQEE Trigger: CTCCTCTTGCCGCTGCTCAACTTCAAGTCTCCTTCATTCTTCTCCAAATTTAATATCCTGGGAACGGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS GCA 72 bp | AGAAAATCATGGAACTGTTGTCAGGACGGCCACCACTaGCAGCATTTGGACATATCACAGGGTTGCTATTAT | + |
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Preference number: 6 (lower is better) Translates to: RKSWNCCQDGHH*QHLDISQGCYY Trigger: ATAATAGCAACCCTGTGATATGTCCAAATGCTGGCAGTGGTGGCCGTCCTGACAACAGTTCCATGATTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS CAA 90 bp | GATGATAACGTGAAACACCAACTTAGGCCATGTCAGACGCTCCTCTaGGTGAAGGGAGATTATATAGATGAGAGACGGGTATATGAACAC | + |
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Preference number: 6 (lower is better) Translates to: DDNVKHQLRPCQTLL*VKGDYIDERRVYEH Trigger: GTGTTCATATACCCGTCTCTCATCTATATAATCTCCCTTCACCAAGAGGAGCGTCTGACATGGCCTAAGTTGGTGTTTCACGTTATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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| CDS TCA 72 bp | TTCTTGTTGTTTTTCAAGAGTGTGATGATGCAGTTGTaGATAAAGAAGGCCAGAGTAAGCACCCCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLLFFKSVMMQL*IKKARVSTPIS Trigger: GCTGATGGGGGTGCTTACTCTGGCCTTCTTTATTCACAACTGCATCATCACACTCTTGAAAAACAACAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052514.6 |
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