Pregenerated sensors for SLC38A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034224Ensembl transcript IDs: ENSMUST00000036748.15, ENSMUST00000133821.2, ENSMUST00000138061.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTGGCAGGAACTTGTCACAGCCGTCCTTCCTCACCGGGGTCCCGTaGGCCATAGGAGAAGCAGTGCTCAATAGACAGGGCAGCACCTTT | + |
|
Preference number: 1 (lower is better) Translates to: RGRNLSQPSFLTGVP*AIGEAVLNRQGSTF Trigger: AAAGGTGCTGCCCTGTCTATTGAGCACTGCTTCTCCTATGGCTCACGGGACCCCGGTGAGGAAGGACGGCTGTGACAAGTTCCTGCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR GCA 90 bp | GCCCATGAGAATGTAATGGCTCAGCTACTGCTGCAGCATCATGCCTaGCTGCCTGCCTGCCACCATGCTCCCTGCCATGATGCTCATGAA | + |
|
Preference number: 1 (lower is better) Translates to: AHENVMAQLLLQHHA*LPACHHAPCHDAHE Trigger: TTCATGAGCATCATGGCAGGGAGCATGGTGGCAGGCAGGCAGGCAGGCATGATGCTGCAGCAGTAGCTGAGCCATTACATTCTCATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 90 bp | GGATTAGGAGGTGTGGTCTTGTTGAAGGAGGCTTGTCACTGGGAGTaGGTCCACATCGTTCCCAGTGTGTGCTCTCTGCCTTGTGCTCGC | + |
|
Preference number: 1 (lower is better) Translates to: GLGGVVLLKEACHWE*VHIVPSVCSLPCAR Trigger: GCGAGCACAAGGCAGAGAGCACACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACCTCCTAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR GCA 90 bp | CAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGAATGCAGTTTaGACTTTGCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: QTPTMETFEAGLNAV*TLHSMGAREWNPVV Trigger: AACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 90 bp | CATCTACAAGCCAGGGACACTAAGGAATTCCTGCAACCACCAGAGTaGACAGTGGGAAGAACGTTCCAGAACCTTCTGAAGCACCATGAC | + |
|
Preference number: 1 (lower is better) Translates to: HLQARDTKEFLQPPE*TVGRTFQNLLKHHD Trigger: GTCATGGTGCTTCAGAAGGTTCTGGAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAGGAATTCCTTAGTGTCCCTGGCTTGTAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 90 bp | GTCTTTACACATAGCGGGTGCAGACAAGTGCTCACTAACTTGAGATaGGCATTCCGCTTGGAAAAGGACACACAGGATAGGTGTCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: VFTHSGCRQVLTNLR*AFRLEKDTQDRCPP Trigger: GGGTGGACACCTATCCTGTGTGTCCTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAGCACTTGTCTGCACCCGCTATGTGTAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR TCA 90 bp | GTCACAGCCGTCCTTCCTCACCGGGGTCCCGTGAGCCATAGGAGAAGCAGTGCTGGCCAGATGCAGGAGTaGTTGTGTCAGCCCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTAVLPHRGPVSHRRSSAGQMQE*LCQPRG Trigger: GCCTCTGGGCTGACACAATCACTCCTGCATCTGGCC...AGCACTGCTTCTCCTATGGCTCACGGGACCCCGGTGAGGAAGGACGGCTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGTCACTGGGAGTGGGTCCACATCGTTCCCAGTGTGTGCTCTCTGCCTTGTCTCACCGGGGTCCCGTaGGCCATAGGAGAAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ACHWEWVHIVPSVCSLPCLTGVP*AIGEAV Trigger: CACTGCTTCTCCTATGGCTCACGGGACCCCGGTGAG...ACAAGGCAGAGAGCACACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGCACGTTCAGGTTTCATGCCTGCCTGCCTaGCTGCCACCATGCTCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGVGSCRDAHLTAWHVQVSCLPA*LPPCSL Trigger: CAGGGAGCATGGTGGCAGGCAGGCAGGCAGGCATGA...AACCTGAACGTGCCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGCACGTCCAGTGTGTGCTCTCTaGCTTGTGCTCGCCCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRVRSWQLQRCPPHSLARPVCAL*LVLAHE Trigger: CTCATGGGCGAGCACAAGGCAGAGAGCACACACTGG...ACGTGCCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAGTGTGTGCTCTCTGCCTTGTGCTCGCCCATGAGAATGTAATGGCTCAGTGCCACCATGCTCCCTaGCATGATGCTCATGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: FPVCALCLVLAHENVMAQCHHAP*HDAHER Trigger: GCGTTCATGAGCATCATGGCAGGGAGCATGGTGGCA...CTGAGCCATTACATTCTCATGGGCGAGCACAAGGCAGAGAGCACACACTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 90 bp | AGCGGGTGCAGACAAGTGCTCACTAACTTGAGATGGGCATTCCGCTaGGAAAAGGACACACAGGATAGGTGTCCACCCTGTGACTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGCRQVLTNLRWAFR*EKDTQDRCPPCDYS Trigger: ACTGTAGTCACAGGGTGGACACCTATCCTGTGTGTCCTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAGCACTTGTCTGCACCCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 90 bp | AACTGTTTGGGAAGGATTAGGAGGTGTGGTCTTGTTGAAGGAGGCTaGTCACTGGGAGTGGGTCCACATCGTTCCCAGTGTGTGCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NCLGRIRRCGLVEGG*SLGVGPHRSQCVLS Trigger: AGAGAGCACACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACCTCCTAATCCTTCCCAAACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 90 bp | GAATGGTTGGTCTCAACTGTTTGGGAAGGATTAGGAGGTGTGGTCTaGTTGAAGGAGGCTTGTCACTGGGAGTGGGTCCACATCGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: EWLVSTVWEGLGGVV*LKEACHWEWVHIVP Trigger: GGGAACGATGTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACCTCCTAATCCTTCCCAAACAGTTGAGACCAACCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCAGGGACACTAAGGAATTCCTGCAACCACCAGAGTGGACAGTGGGAAGAAGGTCTTCAGGCCAGATaGAGGAGTGATTGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KPGTLRNSCNHQSGQWEEGLQAR*RSDCVS Trigger: GCTGACACAATCACTCCTGCATCTGGCCTGAAGACC...TTCTTCCCACTGTCCACTCTGGTGGTTGCAGGAATTCCTTAGTGTCCCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | CCTCACGTAACCTTAAGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGATCGTTCCCAGTGTGTaGTCTCTGCCTTGTGCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: PHVTLSQTPTMETFEAGLIVPSV*SLPCAR Trigger: GCGAGCACAAGGCAGAGAGCACACACTGGGAACGAT...CAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACTTAAGGTTACGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 90 bp | TTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTTaGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LHFALHGSQGVESGG*NENGSHRFTCMNGW Trigger: CCAACCATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGCTGCAACCACCAGAGTaGACAGTGGGAAGAACGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GVESGGLNENGSHRFTCMLQPPE*TVGRTF Trigger: GAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAG...CATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCACAGCCTGGCACGTTCAGGTTTATATGAAGCATGACAATATTATTTGTAGCATCATGCCTGCCTaGCTGCCTGCCACCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLTAWHVQVYMKHDNIICSIMPA*LPATML Trigger: GAGCATGGTGGCAGGCAGGCAGGCAGGCATGATGCT...ACAAATAATATTGTCATGCTTCATATAAACCTGAACGTGCCAGGCTGTGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR TCA 90 bp | ATTATTGTAGCTCCTTCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCATCCGGTGGTTTGAATaGAAATGGCTCCCACAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IIVAPSIAELGVGSCRDAIRWFE*KWLPQV Trigger: AACCTGTGGGAGCCATTTTCATTCAAACCACCGGAT...GGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGAAGGAGCTACAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 90 bp | TTTTATTATTGTAGCTCCTTCGATAGCAGAGTTAGGAGTTGGCAGTaGCAGAGATGCCCACCTCACAGCCTGGCACGTTCAGGTTTATAT | + |
|
Preference number: 2 (lower is better) Translates to: FYYCSSFDSRVRSWQ*QRCPPHSLARSGLY Trigger: ATATAAACCTGAACGTGCCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGAAGGAGCTACAATAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATCTCACTAACTTGAGATaGGCATTCCGCTTGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VESGGLNENGSHRFTCMNLTNLR*AFRLEK Trigger: CTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAG...ATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCACAGCCTGGCACGTTCAGGTTTATATGAAGCATGACAATATTATTTGTGATGGGCATTCCGCTTaGAAAAGGACACACAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: HLTAWHVQVYMKHDNIICDGHSA*KRTHRI Trigger: TATCCTGTGTGTCCTTTTCCAAGCGGAATGCCCATC...ACAAATAATATTGTCATGCTTCATATAAACCTGAACGTGCCAGGCTGTGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR TCA 72 bp | AACTTGTCACAGCCGTCCTTCCTCACCGGGGTCCCGTaGGCCATAGGAGAAGCAGTGCTCAATAGACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLSQPSFLTGVP*AIGEAVLNRQG Trigger: GCCCTGTCTATTGAGCACTGCTTCTCCTATGGCTCACGGGACCCCGGTGAGGAAGGACGGCTGTGACAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR GCA 72 bp | GGGAGTGGGTCCACATCGTTCCCAGTGTGTGCTCTCTaGCTTGTGCTCGCCCATGAGAATGTAATGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSGSTSFPVCAL*LVLAHENVMAQ Trigger: CTGAGCCATTACATTCTCATGGGCGAGCACAAGGCAGAGAGCACACACTGGGAACGATGTGGACCCACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 72 bp | GGTGTGGTCTTGTTGAAGGAGGCTTGTCACTGGGAGTaGGTCCACATCGTTCCCAGTGTGTGCTCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GVVLLKEACHWE*VHIVPSVCSLP Trigger: AGGCAGAGAGCACACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR TCA 72 bp | CAGAGTGGACAGTGGGAAGAACGTTCCAGAACCTTCTaGAGCACCATGACCCACCACTCGCTAGCCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: QSGQWEERSRTF*STMTHHSLAHT Trigger: AGTGTGGGCTAGCGAGTGGTGGGTCATGGTGCTTCAGAAGGTTCTGGAACGTTCTTCCCACTGTCCACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 72 bp | CATAGCGGGTGCAGACAAGTGCTCACTAACTTGAGATaGGCATTCCGCTTGGAAAAGGACACACAGGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSGCRQVLTNLR*AFRLEKDTQDR Trigger: CCTATCCTGTGTGTCCTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAGCACTTGTCTGCACCCGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR TCA 72 bp | GTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTaGATGCAGTTTGCACTTTGCACTCCATGGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VRPQQWRLLKLD*MQFALCTPWEP Trigger: TGGCTCCCATGGAGTGCAAAGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATTGTGTGCTCTCTGCCTaGTGCTCGCCCATGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VESGGLNENGSHRFTCMNCVLSA*CSPMRM Trigger: CATTCTCATGGGCGAGCACAAGGCAGAGAGCACACA...ATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACGTAACCTTAAGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGTTAGGAGGTGTGGTCTaGTTGAAGGAGGCTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PHVTLSQTPTMETFEAGLLGGVV*LKEACH Trigger: GTGACAAGCCTCCTTCAACAAGACCACACCTCCTAA...CAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACTTAAGGTTACGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR TCA 72 bp | CCCTCCCACACTTGTGGGCATTCCAAATTTACTTCCTaGGAAACAGCAACGTTAGCTGCTCTGACACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSHTCGHSKFTS*ETATLAALTLS Trigger: GCTAAGTGTCAGAGCAGCTAACGTTGCTGTTTCTCAGGAAGTAAATTTGGAATGCCCACAAGTGTGGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR GCA 72 bp | ACAATGGAGACTTTTGAAGCTGGACTGAATGCAGTTTaGACTTTGCACTCCATGGGAGCCAGGGAGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TMETFEAGLNAV*TLHSMGAREWN Trigger: ATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGAATGCAGTTTGCACTGTGGAATCCGGTGGTTaGAATGAAAATGGCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQTPTMETFEAGLNAVCTVESGG*NENGSH Trigger: GTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC...AGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR TCA 72 bp | CGTAACCTTAAGTCAGACCCCAACAATGGAGACTTTTaGAGCTGGACTGAATGCAGTTTGCACTTTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RNLKSDPNNGDF*SWTECSLHFAL Trigger: GAGTGCAAAGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACTTAAGGTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CCA 72 bp | CAGGTTCACATGTATGAATGGTTGGTCTCAACTGTTTaGGAAGGATTAGGAGGTGTGGTCTTGTTGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QVHMYEWLVSTV*EGLGGVVLLKE Trigger: CTCCTTCAACAAGACCACACCTCCTAATCCTTCCCAAACAGTTGAGACCAACCATTCATACATGTGAACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR GCA 72 bp | ACAGTAACTAAGTCACATGTCTTTACACATAGCGGGTaGAGACAAGTGCTCACTAACTTGAGATGGGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: TVTKSHVFTHSG*RQVLTNLRWAF Trigger: GAATGCCCATCTCAAGTTAGTGAGCACTTGTCTGCACCCGCTATGTGTAAAGACATGTGACTTAGTTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | GTCACAGCCGTCCTTCCTCACCGGGGTCCCGTGAGCCATAGGAGAAGCAGTGCTACAGAGTGGGATGGGTaGCAGCAGGGAGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTAVLPHRGPVSHRRSSATEWDG*QQGGAS Trigger: AGAAGCCCCTCCCTGCTGCCACCCATCCCACTCTGT...AGCACTGCTTCTCCTATGGCTCACGGGACCCCGGTGAGGAAGGACGGCTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | ACTAAGGAATTCCTGCAACCACCAGAGTGGACAGTGGGAAGAACGTTCCAGAACAGGCCCAGGGGAAGTTaGGCAGGCCGGCGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKEFLQPPEWTVGRTFQNRPRGS*AGRRPE Trigger: CTCTGGGCGCCGGCCTGCTCAACTTCCCCTGGGCCT...GTTCTGGAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAGGAATTCCTTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGTGTGTGCTCTCTGCCTTGTGCTCGCCCATGAGAATGTAATGGCTCAGGGGCCACCAGGAAGGTaGGCAGCATGCCTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPVCALCLVLAHENVMAQGPPGR*AACLLP Trigger: AGGCAGGAGGCATGCTGCCCACCTTCCTGGTGGCCC...CTGAGCCATTACATTCTCATGGGCGAGCACAAGGCAGAGAGCACACACTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | GCTTGTCACTGGGAGTGGGTCCACATCGTTCCCAGTGTGTGCTCTCTGCCTTGTAGATCAGGGGCAGGGTaGAGTTCTGGGCTGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: ACHWEWVHIVPSVCSLPCRSGAG*SSGLHT Trigger: GGTATGCAGCCCAGAACTTCACCCTGCCCCTGATCT...ACAAGGCAGAGAGCACACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | CCTCACGTAACCTTAAGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGGGGGTCAGCCAGCACTaGAGGCCCCCGTGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHVTLSQTPTMETFEAGLGVSQH*RPPCGP Trigger: TGGGCCACACGGGGGCCTCCAGTGCTGGCTGACCCC...CAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACTTAAGGTTACGTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | TCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGGGTGAAGTTCTGGGCTaGATACCAAGGCTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIAELGVGSCRDAHLTAWGEVLG*IPRLWG Trigger: GCCCCACAGCCTTGGTATGCAGCCCAGAACTTCACC...CCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGAATTCCTGCAACCACCAGAGTGGACAGTGGGAAGAACGTTCCAGAACCCAGCACAGAGAGGATaGCCCAGGCCTCCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKEFLQPPEWTVGRTFQNPAQRG*PRPPGS Trigger: GCTGCCTGGAGGCCTGGGGCATCCTCTCTGTGCTGG...GTTCTGGAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAGGAATTCCTTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | AGCTGGACTGAATGCAGTTTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAATGCATACCAAGGCTGTaGGGCGTCAGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWTECSLHFALHGSQGVECIPRL*GVRQEG Trigger: TCCCTCCTGCCTGACGCCCCACAGCCTTGGTATGCA...TTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAAACTGCATTCAGTCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | TTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTTTGAATGAAAGGTGGTCTGGCCACTaGCAGATGCTGCGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHFALHGSQGVESGGLNERWSGH*QMLRSP Trigger: TGGGCTACGCAGCATCTGTCAGTGGCCAGACCACCT...TTCATTCAAACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | CCTGCAACCACCAGAGTGGACAGTGGGAAGAACGTTCCAGAACCTTCTGAAGCAGCCACTGACAGATGCTaGGTAGCCCAGGATGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PATTRVDSGKNVPEPSEAATDRC*VAQDDQ Trigger: CTGGTCATCCTGGGCTACGCAGCATCTGTCAGTGGC...TGCTTCAGAAGGTTCTGGAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | TCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGTCTGGTTCCACATGCTaGAGTAGATGGAGACGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SIAELGVGSCRDAHLTAWSGSTC*SRWRRR Trigger: CCGCCGTCTCCATCTACTGCAGCATGTGGAACCAGA...CCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | TCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGGGCTCTGGTTCCACATaGTGCAGTAGATGGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SIAELGVGSCRDAHLTAWGSGST*CSRWRR Trigger: CCGTCTCCATCTACTGCAGCATGTGGAACCAGAGCC...CCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGTGTGTGCTCTCTGCCTTGTGCTCGCCCATGAGAATGTAATGGCTCAGGAAACCAGGGTCCAGTaGGAGAGGCTCTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPVCALCLVLAHENVMAQETRVQ*ERLWFH Trigger: GTGGAACCAGAGCCTCTCCCACTGGACCCTGGTTTC...CTGAGCCATTACATTCTCATGGGCGAGCACAAGGCAGAGAGCACACACTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | TCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCACCTCACAGCCTGGGCAGCACTTGACTCTTaGTCCCATGGGTTCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIAELGVGSCRDAHLTAWAALDS*SHGFRV Trigger: GACACGGAACCCATGGGACCAAGAGTCAAGTGCTGC...CCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCACAGCAACAGAACAGTAACTAAGTCACATGTCTTTACACATAGCGGGGACCGGGCTGGCGTATaGGGCCCTGGGGCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHSNRTVTKSHVFTHSGDRAGV*GPGATG Trigger: ACCTGTGGCCCCAGGGCCTCATACGCCAGCCCGGTC...CCCGCTATGTGTAAAGACATGTGACTTAGTTACTGTTCTGTTGCTGTGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | CACAGGATAGGTGTCCACCCTGTGACTACAGTGATACATCTACAAGCCAGGGACGCCACCGCTGTGCTCTaGCCAAAGATGAAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRIGVHPVTTVIHLQARDATAVL*PKMKVP Trigger: GGGCACTTTCATCTTTGGGCAGAGCACAGCGGTGGC...GTCCCTGGCTTGTAGATGTATCACTGTAGTCACAGGGTGGACACCTATCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGTGTGTGCTCTCTGCCTTGTGCTCGCCCATGAGAATGTAATGGCTCAGCACAACTTCTCCAGCTaGTCCCCGATCACTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPVCALCLVLAHENVMAQHNFSS*SPITLR Trigger: CCTCAGAGTGATCGGGGACCAGCTGGAGAAGTTGTG...CTGAGCCATTACATTCTCATGGGCGAGCACAAGGCAGAGAGCACACACTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | GGAAGGATTAGGAGGTGTGGTCTTGTTGAAGGAGGCTaGTCACTGGGAGTGGGTCCACATCGTTCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRIRRCGLVEGG*SLGVGPHRSQC Trigger: ACACTGGGAACGATGTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACCTCCTAATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | TGTAGCTCCTTCGATAGCAGAGTTAGGAGTTGGCAGTaGCAGAGATGCCCACCTCACAGCCTGGCACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSFDSRVRSWQ*QRCPPHSLARS Trigger: TGAACGTGCCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGAAGGAGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | AGCTGGACTGAATGCAGTTTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAAAAGCCACAGAGATCATaGGCAGGTTGGTCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWTECSLHFALHGSQGVEKPQRS*AGWSGS Trigger: GCTTCCTGACCAACCTGCTCATGATCTCTGTGGCTT...TTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAAACTGCATTCAGTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | TTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTTTGAATGAAGGTCCCCGATCACTCTaGGGAAAGCCACAGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LHFALHGSQGVESGGLNEGPRSL*GKPQRS Trigger: TGATCTCTGTGGCTTTCCTCAGAGTGATCGGGGACC...TTCATTCAAACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCACAGCAACAGAACAGTAACTAAGTCACATGTCTTTACACATAGCGGGCCGAACCCAAGGCCCTaGGGGGTCAGCCAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHSNRTVTKSHVFTHSGPNPRP*GVSQHW Trigger: CCAGTGCTGGCTGACCCCTCAGGGCCTTGGGTTCGG...CCCGCTATGTGTAAAGACATGTGACTTAGTTACTGTTCTGTTGCTGTGAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | CCTGCAACCACCAGAGTGGACAGTGGGAAGAACGTTCCAGAACCTTCTGAAGCACCAGAGTACCTAGGATaGTGGTGTACTTCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PATTRVDSGKNVPEPSEAPEYLG*WCTSGG Trigger: CCCTCCAGAAGTACACCAGCATCCTAGGTACTCTGG...TGCTTCAGAAGGTTCTGGAACGTTCTTCCCACTGTCCACTCTGGTGGTTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | AGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGAATGCAGTTTGCACTCACACAGCTTCCCCATaGCGGGGCCACATAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTMETFEAGLNAVCTHTASP*RGHIAP Trigger: GGGAGCTATGTGGCCCCGCCATGGGGAAGCTGTGTG...AGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGCTGGAGGCCCCCGTGTaGCCCAGTAGCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVESGGLNENGSHRFTCMLEAPV*PSSSFS Trigger: GGAAAAAGAGCTACTGGGCCACACGGGGGCCTCCAG...CATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | GTCTCAACTGTTTGGGAAGGATTAGGAGGTGTGGTCTaGTTGAAGGAGGCTTGTCACTGGGAGTGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVWEGLGGVV*LKEACHWEWVH Trigger: GTGGACCCACTCCCAGTGACAAGCCTCCTTCAACAAGACCACACCTCCTAATCCTTCCCAAACAGTTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | GCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTTaGAATGAAAATGGCTCCCACAGGTTCACATGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ALHGSQGVESGG*NENGSHRFTCM Trigger: CATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | GTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATTCTCCAGAGGGCCTCTaGTCCCTCTGGGCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VESGGLNENGSHRFTCMNSPEGL*SLWAAL Trigger: AAGGGCAGCCCAGAGGGAGCAGAGGCCCTCTGGAGA...ATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | ATTATTGTAGCTCCTTCGATAGCAGAGTTAGGAGTTGGCAGTTGCAGAGATGCCCCAGTGAGGACAGAGTaGGATGGGTGGCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIVAPSIAELGVGSCRDAPVRTE*DGWQQG Trigger: TCCCTGCTGCCACCCATCCCACTCTGTCCTCACTGG...GGCATCTCTGCAACTGCCAACTCCTAACTCTGCTATCGAAGGAGCTACAATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | AGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGAATGCAGTTTGCACTGGCAGGGTGAAGTTCTaGGCTGCATACCAAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQTPTMETFEAGLNAVCTGRVKF*AAYQGC Trigger: ACAGCCTTGGTATGCAGCCCAGAACTTCACCCTGCC...AGTGCAAACTGCATTCAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | AGACAAGTGCTCACTAACTTGAGATGGGCATTCCGCTaGGAAAAGGACACACAGGATAGGTGTCCACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQVLTNLRWAFR*EKDTQDRCPPC Trigger: ACAGGGTGGACACCTATCCTGTGTGTCCTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAGCACTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | GTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATACATGCTGCAGTAGATaGAGACGGCGGCCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VESGGLNENGSHRFTCMNTCCSR*RRRPHD Trigger: GTCATGAGGCCGCCGTCTCCATCTACTGCAGCATGT...ATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| 3UTR CAA 72 bp | TTTACACATAGCGGGTGCAGACAAGTGCTCACTAACTaGAGATGGGCATTCCGCTTGGAAAAGGACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FTHSGCRQVLTN*RWAFRLEKDTQ Trigger: CTGTGTGTCCTTTTCCAAGCGGAATGCCCATCTCAAGTTAGTGAGCACTTGTCTGCACCCGCTATGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCACAGCAACAGAACAGTAACTAAGTCACATGTCTTTACACATAGCGGGTGCTCTGCCCAAAGATaGAAGTGCCCACCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHSNRTVTKSHVFTHSGCSAQR*KCPPAQ Trigger: CTGTGCTGGTGGGCACTTTCATCTTTGGGCAGAGCA...CCCGCTATGTGTAAAGACATGTGACTTAGTTACTGTTCTGTTGCTGTGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR GCA 90 bp | CACCTCACAGCCTGGCACGTTCAGGTTTATATGAAGCATGACAATATTATTTGTGGAAGGTGGGCAGCATaGCTCCTGCCTTGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTAWHVQVYMKHDNIICGRWAA*LLPCRR Trigger: CCTTCTACAAGGCAGGAGGCATGCTGCCCACCTTCC...ACAAATAATATTGTCATGCTTCATATAAACCTGAACGTGCCAGGCTGTGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | CCTCACGTAACCTTAAGTCAGACCCCAACAATGGAGACTTTTGAAGCTGGACTGCCAGGAATAGCACAATaGGGTAGACAGTCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PHVTLSQTPTMETFEAGLPGIAQ*GRQSQW Trigger: CCATTGTGACTGTCTACCCCATTGTGCTATTCCTGG...CAGTCCAGCTTCAAAAGTCTCCATTGTTGGGGTCTGACTTAAGGTTACGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTGCACTCCATGGGAGCCAGGGAGTGGAATCCGGTGGTTTGAATGAAGATGAGACACAAACCTaGGAAGATGAAGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHFALHGSQGVESGGLNEDETQT*EDEDEE Trigger: TTCTTCATCTTCATCTTCCCAGGTTTGTGTCTCATC...TTCATTCAAACCACCGGATTCCACTCCCTGGCTCCCATGGAGTGCAAAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS TCA 90 bp | CACCACCACCCACAGGAAGGTCAGAGGCAGCCGAACCCAAGGCCCTaGGGGGTCAGCCAGCACTGGAGGCCCCCGTGTGGCCCAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHHPQEGQRQPNPRP*GVSQHWRPPCGPVA Trigger: AGCTACTGGGCCACACGGGGGCCTCCAGTGCTGGCTGACCCCTCAGGGCCTTGGGTTCGGCTGCCTCTGACCTTCCTGTGGGTGGTGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS GCA 90 bp | CTCCCGGACCACACCCTGGTAGGTGGTCTGGCCACTGACAGATGCTaGGTAGCCCAGGATGACCAGGCCGCTGATCAGGAAGACCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPDHTLVGGLATDRC*VAQDDQAADQEDQR Trigger: TCTTTGGTCTTCCTGATCAGCGGCCTGGTCATCCTGGGCTACGCAGCATCTGTCAGTGGCCAGACCACCTACCAGGGTGTGGTCCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS CCA 90 bp | GGCTGTGGGGCGTCAGGCAGGAGGGAGTCACACAACTTCTCCAGCTaGTCCCCGATCACTCTGAGGAAAGCCACAGAGATCATGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGASGRRESHNFSS*SPITLRKATEIMSR Trigger: CCTGCTCATGATCTCTGTGGCTTTCCTCAGAGTGATCGGGGACCAGCTGGAGAAGTTGTGTGACTCCCTCCTGCCTGACGCCCCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS GCA 90 bp | AAAGATGACCAGCATGGAGATCAGGGGCAGGGTGAAGTTCTGGGCTaGATACCAAGGCTGTGGGGCGTCAGGCAGGAGGGAGTCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: KDDQHGDQGQGEVLG*IPRLWGVRQEGVTQ Trigger: TTGTGTGACTCCCTCCTGCCTGACGCCCCACAGCCTTGGTATGCAGCCCAGAACTTCACCCTGCCCCTGATCTCCATGCTGGTCATCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS GCA 90 bp | ACAGCACAGAAACCAGGGTCCAGTGGGAGAGGCTCTGGTTCCACATaGTGCAGTAGATGGAGACGGCGGCCTCATGACACTGGAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAQKPGSSGRGSGST*CSRWRRRPHDTGIQ Trigger: TTGGATTCCAGTGTCATGAGGCCGCCGTCTCCATCTACTGCAGCATGTGGAACCAGAGCCTCTCCCACTGGACCCTGGTTTCTGTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS TCA 90 bp | GGTAGACAGTCACAATGGAGACCGCAAAGAGAACGCGTGCTACGATaGTGGCTGTGTCATTGCCTGGGTAGGACATTAAGATATCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRQSQWRPQRERVLR*WLCHCLGRTLRYQQ Trigger: CTGCTGATATCTTAATGTCCTACCCAGGCAATGACACAGCCATCATCGTAGCACGCGTTCTCTTTGCGGTCTCCATTGTGACTGTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CAA 90 bp | GTGGAATCCGGTGGTTTGAATGAAAATGGCTCCCACAGGTTCACATGTATGAATGGGCCACAGGTAGTATaGCACCGTGATGACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VESGGLNENGSHRFTCMNGPQVV*HRDDQS Trigger: GCTCTGGTCATCACGGTGCAATACTACCTGTGGCCC...ATTCATACATGTGAACCTGTGGGAGCCATTTTCATTCAAACCACCGGATTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS-3UTR CAA 90 bp | CACCTCACAGCCTGGCACGTTCAGGTTTATATGAAGCATGACAATATTATTTGTGAGATCATGAGCAGGTaGGTCAGGAAGCAGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLTAWHVQVYMKHDNIICEIMSR*VRKQIS Trigger: TGAGATCTGCTTCCTGACCAACCTGCTCATGATCTC...ACAAATAATATTGTCATGCTTCATATAAACCTGAACGTGCCAGGCTGTGAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS TCA 72 bp | CCACAGGAAGGTCAGAGGCAGCCGAACCCAAGGCCCTaGGGGGTCAGCCAGCACTGGAGGCCCCCGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQEGQRQPNPRP*GVSQHWRPPCG Trigger: GCCACACGGGGGCCTCCAGTGCTGGCTGACCCCTCAGGGCCTTGGGTTCGGCTGCCTCTGACCTTCCTGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS TCA 72 bp | GCATGCCTCCTGCCTTGTAGAAGGCCCAGGGGAAGTTaGGCAGGCCGGCGCCCAGAGCGGACTTCAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACLLPCRRPRGS*AGRRPERTSRG Trigger: TCCTCTTGAAGTCCGCTCTGGGCGCCGGCCTGCTCAACTTCCCCTGGGCCTTCTACAAGGCAGGAGGCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS GCA 72 bp | GACCACACCCTGGTAGGTGGTCTGGCCACTGACAGATaGTGCGTAGCCCAGGATGACCAGGCCGCTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: DHTLVGGLATDR*CVAQDDQAADQ Trigger: CTGATCAGCGGCCTGGTCATCCTGGGCTACGCAGCATCTGTCAGTGGCCAGACCACCTACCAGGGTGTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS GCA 72 bp | CAGCATGGAGATCAGGGGCAGGGTGAAGTTCTGGGCTaGATACCAAGGCTGTGGGGCGTCAGGCAGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QHGDQGQGEVLG*IPRLWGVRQEG Trigger: TCCCTCCTGCCTGACGCCCCACAGCCTTGGTATGCAGCCCAGAACTTCACCCTGCCCCTGATCTCCATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS CCA 72 bp | GGTTGGTCAGGAAGCAGATCTCACACAGCTTCCCCATaGCGGGGCCACATAGCTCCCGGACCACACCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWSGSRSHTASP*RGHIAPGPHPG Trigger: ACCAGGGTGTGGTCCGGGAGCTATGTGGCCCCGCCATGGGGAAGCTGTGTGAGATCTGCTTCCTGACCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS CAA 72 bp | GGGCTGGCGTATGAGGCCCTGGGGCCACAGGTAGTATaGCACCGTGATGACCAGAGCAAGGTAGCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLAYEALGPQVV*HRDDQSKVAGS Trigger: GCTGCCTGCTACCTTGCTCTGGTCATCACGGTGCAATACTACCTGTGGCCCCAGGGCCTCATACGCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036748.15 ENSMUST00000138061.8 |
||
| CDS CAA 90 bp | CAAAGGACCGGGCTGGCGTATGAGGCCCTGGGGCCACAGGTAGTATaGCACCGTGATGACCAGAGCAAGGTAGCAGGCAGCCAGAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: QRTGLAYEALGPQVV*HRDDQSKVAGSQST Trigger: GGTACTCTGGCTGCCTGCTACCTTGCTCTGGTCATCACGGTGCAATACTACCTGTGGCCCCAGGGCCTCATACGCCAGCCCGGTCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036748.15 ENSMUST00000138061.8 |
||
| CDS CAA 90 bp | GTGCCCACCAGCACAGAGAGGATGCCCCAGGCCTCCAGGCAGCACTaGACTCTTGGTCCCATGGGTTCCGTGTCCACAGCACAGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VPTSTERMPQASRQH*TLGPMGSVSTAQMR Trigger: TCTCATCTGTGCTGTGGACACGGAACCCATGGGACCAAGAGTCAAGTGCTGCCTGGAGGCCTGGGGCATCCTCTCTGTGCTGGTGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS GCA 72 bp | CACACCCTGGTAGGTGGTCTGGCCACTGACAGATGCTaGGTAGCCCAGGATGACCAGGCCGCTGATCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HTLVGGLATDRC*VAQDDQAADQE Trigger: TTCCTGATCAGCGGCCTGGTCATCCTGGGCTACGCAGCATCTGTCAGTGGCCAGACCACCTACCAGGGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS CCA 72 bp | GGGCAGGGTGAAGTTCTGGGCTGCATACCAAGGCTGTaGGGCGTCAGGCAGGAGGGAGTCACACAACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQGEVLGCIPRL*GVRQEGVTQLL Trigger: GAGAAGTTGTGTGACTCCCTCCTGCCTGACGCCCCACAGCCTTGGTATGCAGCCCAGAACTTCACCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS GCA 72 bp | AAACCAGGGTCCAGTGGGAGAGGCTCTGGTTCCACATaGTGCAGTAGATGGAGACGGCGGCCTCATGACACT | + |
|
Preference number: 6 (lower is better) Translates to: KPGSSGRGSGST*CSRWRRRPHDT Trigger: AGTGTCATGAGGCCGCCGTCTCCATCTACTGCAGCATGTGGAACCAGAGCCTCTCCCACTGGACCCTGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS CCA 72 bp | GCGTCAGGCAGGAGGGAGTCACACAACTTCTCCAGCTaGTCCCCGATCACTCTGAGGAAAGCCACAGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: ASGRRESHNFSS*SPITLRKATEI Trigger: GATCTCTGTGGCTTTCCTCAGAGTGATCGGGGACCAGCTGGAGAAGTTGTGTGACTCCCTCCTGCCTGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS CCA 72 bp | AGTGGGAGAGGCTCTGGTTCCACATGCTGCAGTAGATaGAGACGGCGGCCTCATGACACTGGAATCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRGSGSTCCSR*RRRPHDTGIQS Trigger: GCTTTGGATTCCAGTGTCATGAGGCCGCCGTCTCCATCTACTGCAGCATGTGGAACCAGAGCCTCTCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS TCA 72 bp | GCTGGTGTACTTCTGGAGGGCAATTTCCCGAAGTGCTaGCAGGGGAAAGATGACCAGCATGGAGATCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGVLLEGNFPKC*QGKDDQHGDQG Trigger: CCCCTGATCTCCATGCTGGTCATCTTTCCCCTGTCAGCACTTCGGGAAATTGCCCTCCAGAAGTACACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036748.15 ENSMUST00000138061.8 |
||
| CDS GCA 72 bp | CCAGAGCAAGGTAGCAGGCAGCCAGAGTACCTAGGATaGTGGTGTACTTCTGGAGGGCAATTTCCCGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PEQGSRQPEYLG*WCTSGGQFPEV Trigger: CACTTCGGGAAATTGCCCTCCAGAAGTACACCAGCATCCTAGGTACTCTGGCTGCCTGCTACCTTGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036748.15 ENSMUST00000138061.8 |
||
| CDS CCA 72 bp | CAGGCAGCCAGAGTACCTAGGATGCTGGTGTACTTCTaGAGGGCAATTTCCCGAAGTGCTGACAGGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QAARVPRMLVYF*RAISRSADRGK Trigger: CTTTCCCCTGTCAGCACTTCGGGAAATTGCCCTCCAGAAGTACACCAGCATCCTAGGTACTCTGGCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036748.15 ENSMUST00000138061.8 |
||
| CDS GCA 72 bp | GTAGACAGTCACAATGGAGACCGCAAAGAGAACGCGTaGTACGATGATGGCTGTGTCATTGCCTGGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VDSHNGDRKENA*YDDGCVIAWVG Trigger: TCCTACCCAGGCAATGACACAGCCATCATCGTAGCACGCGTTCTCTTTGCGGTCTCCATTGTGACTGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS CCA 72 bp | AGTCCTGCATCACAGACCTCCCCAGGAATAGCACAATaGGGTAGACAGTCACAATGGAGACCGCAAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPASQTSPGIAQ*GRQSQWRPQRE Trigger: TTCTCTTTGCGGTCTCCATTGTGACTGTCTACCCCATTGTGCTATTCCTGGGGAGGTCTGTGATGCAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||
| CDS CAA 72 bp | ATCACTCTGAGGAAAGCCACAGAGATCATGAGCAGGTaGGTCAGGAAGCAGATCTCACACAGCTTCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ITLRKATEIMSR*VRKQISHSFPM Trigger: CATGGGGAAGCTGTGTGAGATCTGCTTCCTGACCAACCTGCTCATGATCTCTGTGGCTTTCCTCAGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036748.15 ENSMUST00000133821.2 ENSMUST00000138061.8 |
||
| CDS TCA 72 bp | TCACAATGGAGACCGCAAAGAGAACGCGTGCTACGATaGTGGCTGTGTCATTGCCTGGGTAGGACATTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQWRPQRERVLR*WLCHCLGRTLR Trigger: TCTTAATGTCCTACCCAGGCAATGACACAGCCATCATCGTAGCACGCGTTCTCTTTGCGGTCTCCATTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036748.15 |
||