Pregenerated sensors for SLC38A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044712Ensembl transcript IDs: ENSMUST00000058139.14, ENSMUST00000101313.4, ENSMUST00000122920.8, ENSMUST00000126488.8, ENSMUST00000140523.8, ENSMUST00000153941.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGCACTTGGCAGGAGCAGCAGCAGGCAGTCTGTAGCGGTGATTaGTTAACCCGCTTTGGCTCCTGGCAAGTCCCACTCAAGCTGCGC | + |
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Preference number: 1 (lower is better) Translates to: PSTWQEQQQAVCSGD*LTRFGSWQVPLKLR Trigger: GCGCAGCTTGAGTGGGACTTGCCAGGAGCCAAAGCGGGTTAACCAATCACCGCTACAGACTGCCTGCTGCTGCTCCTGCCAAGTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTGCTGCCCAGTTACTTATTGGGCAGCAGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LPSAAQLLIGQQPH Trigger: GTGGGGCTGCTGCCCAATAAGTAACTGGGCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR CCA 90 bp | CCAGGCATGTGCCAGGATGGTGGCAGAGTTCCTAACCCCAGCACTTaGCAGGAGCAGCAGCAGGCAGTCTGTAGCGGTGATTGGTTAACC | + |
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Preference number: 1 (lower is better) Translates to: PGMCQDGGRVPNPST*QEQQQAVCSGDWLT Trigger: GGTTAACCAATCACCGCTACAGACTGCCTGCTGCTGCTCCTGCCAAGTGCTGGGGTTAGGAACTCTGCCACCATCCTGGCACATGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR GCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGCCCAGTTACTTATTGGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLPSAAQLLIGQQ Trigger: CTGCTGCCCAATAAGTAACTGGGCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR CCA 90 bp | TTACTCATGTTAGAGCCCATTCAGGCCTACCTGGCCCCATGGCTCTaGGAAATGATTTGGCAGATAAGGCCACTAAAGTGGTGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLMLEPIQAYLAPWL*EMIWQIRPLKWWLL Trigger: CAGCAGCCACCACTTTAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTGAATGGGCTCTAACATGAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR GCA 90 bp | CCTCTGGCTAATCACTCCATCACTTCTGTCCTGAAGCCTTCACCCTaGTCCAATATTCTGAATTATTATGGTGCCTGCCACCACCACCCG | + |
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Preference number: 1 (lower is better) Translates to: PLANHSITSVLKPSP*SNILNYYGACHHHP Trigger: CGGGTGGTGGTGGCAGGCACCATAATAATTCAGAATATTGGAGCAGGGTGAAGGCTTCAGGACAGAAGTGATGGAGTGATTAGCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
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| 3UTR GCA 90 bp | CAGCCCGAGAGAGTTGCAAGGCTAAGCACTGCAATGGAAAGGCTCTaGGGCATATATGAGCCTATTCTAGGGAGACATGTCATCTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: QPERVARLSTAMERL*GIYEPILGRHVIFH Trigger: ATGAAAGATGACATGTCTCCCTAGAATAGGCTCATATATGCCGCAGAGCCTTTCCATTGCAGTGCTTAGCCTTGCAACTCTCTCGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR CCA 90 bp | TTTATATTACTCATGTTAGAGCCCATTCAGGCCTACCTGGCCCCATaGCTCTGGGAAATGATTTGGCAGATAAGGCCACTAAAGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: FILLMLEPIQAYLAP*LWEMIWQIRPLKWW Trigger: CCACCACTTTAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTGAATGGGCTCTAACATGAGTAATATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR CCA 90 bp | GTAAATTATCAATTGAAGCCAGCTGAGGACAGGGACCCTCAGGCCTaGAAGCCAGGCTTTGGGAACCAAATTAAGACCTTTGTCTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: VNYQLKPAEDRDPQA*KPGFGNQIKTFVLE Trigger: TTCTAAGACAAAGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGGCCTGAGGGTCCCTGTCCTCAGCTGGCTTCAATTGATAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR CCA 90 bp | ACCGGAGAAAAAGCCTCACATGTGATTCAACATTGTCTTGAGGCATaGAGTGCTTGGGGGAAACCCAGACTCCTTAAGACTGATAATGGA | + |
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Preference number: 1 (lower is better) Translates to: TGEKASHVIQHCLEA*SAWGKPRLLKTDNG Trigger: TCCATTATCAGTCTTAAGGAGTCTGGGTTTCCCCCAAGCACTCCATGCCTCAAGACAATGTTGAATCACATGTGAGGCTTTTTCTCCGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR TCA 90 bp | AGAGCTAATCCTGTACATGGCTCCTTTACCTACACACTGGGGATTTaGCCTCTATCTCCACTCTCATTAATATGGGTGGCCTATTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RANPVHGSFTYTLGI*PLSPLSLIWVAYLL Trigger: GAGCAAATAGGCCACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGTAGGTAAAGGAGCCATGTACAGGATTAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR GCA 90 bp | AGGATTCGCAACCTTTCAGTTTGTGTGTCTTTAAGACAGCACAATTaGCAACTGCAGTTTTGTGGCAGAATGGGCCATTGTTGTGGATCC | + |
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Preference number: 1 (lower is better) Translates to: RIRNLSVCVSLRQHN*QLQFCGRMGHCCGS Trigger: GGATCCACAACAATGGCCCATTCTGCCACAAAACTGCAGTTGGCAATTGTGCTGTCTTAAAGACACACAAACTGAAAGGTTGCGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR CCA 90 bp | CCTCATGTGGGAATTAACCCACGCGGTATTCGACCTCTACAGGTCTaGCAAATGGATGTTACACATGTTTCTTCCTTTGGAAAACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: PHVGINPRGIRPLQV*QMDVTHVSSFGKLQ Trigger: TTGAAGTTTTCCAAAGGAAGAAACATGTGTAACATCCATTTGCCAGACCTGTAGAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR CCA 90 bp | TGGGAATTAACCCACGCGGTATTCGACCTCTACAGGTCTGGCAAATaGATGTTACACATGTTTCTTCCTTTGGAAAACTTCAATATCTCC | + |
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Preference number: 1 (lower is better) Translates to: WELTHAVFDLYRSGK*MLHMFLPLENFNIS Trigger: GGAGATATTGAAGTTTTCCAAAGGAAGAAACATGTGTAACATCCATTTGCCAGACCTGTAGAGGTCGAATACCGCGTGGGTTAATTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR CCA 90 bp | TTGTTGTGGATCCATCCAAACGTATCCCCAGCTAAAATAATAGATTaGTATCCTGATGCAATTGCACAGCTTGCCCTTAAAGGTCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LLWIHPNVSPAKIID*YPDAIAQLALKGLK Trigger: TTTTAGACCTTTAAGGGCAAGCTGTGCAATTGCATCAGGATACCAATCTATTATTTTAGCTGGGGATACGTTTGGATGGATCCACAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR TCA 90 bp | CCAGATACAACTAGATGTATTATGACAAATAACTCAGCAGGGATGTaGACAAAAGTTTCCGGGATTGTGTGTTATTTCCATTCAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: PDTTRCIMTNNSAGM*TKVSGIVCYFHSVC Trigger: ACATACTGAATGGAAATAACACACAATCCCGGAAACTTTTGTTCACATCCCTGCTGAGTTATTTGTCATAATACATCTAGTTGTATCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR TCA 90 bp | GTTAATCAACTCATAGATCTTGTCCAGATACAACTAGATGTATTATaGCAAATAACTCAGCAGGGATGTGAACAAAAGTTTCCGGGATTG | + |
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Preference number: 1 (lower is better) Translates to: VNQLIDLVQIQLDVL*QITQQGCEQKFPGL Trigger: CAATCCCGGAAACTTTTGTTCACATCCCTGCTGAGTTATTTGTCATAATACATCTAGTTGTATCTGGACAAGATCTATGAGTTGATTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCCTCCCGAGTGCTGCCCAGTTACTTATTGGGCAGCAGCCCCACCCACCTGGCACCTTCCACAATaGTCCCTTCTTGTTTATAGA | + |
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Preference number: 2 (lower is better) Translates to: PLPPECCPVTYWAAAPPTWHLPQ*SLLVYR Trigger: TCTATAAACAAGAAGGGATCATTGTGGAAGGTGCCA...GGTGGGTGGGGCTGCTGCCCAATAAGTAACTGGGCAGCACTCGGGAGGCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTGGCCTTAATTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACGACGCAGCCCGAGAGAGTTaGAAGGCTAAGCACTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: GFGLNSDSLGSVWTGPDDAARES*KAKHCN Trigger: ATTGCAGTGCTTAGCCTTGCAACTCTCTCGGGCTGC...GTCGTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAATTAAGGCCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGGTCGCTGGCCACTCAGCTCTTATATCCCATGAGGCTAGACTCATTGCACTGCAAGGCTAAGCACTaGAATGGAAAGGCTCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: NRSLATQLLYPMRLDSLHCKAKH*NGKALR Trigger: CCGCAGAGCCTTTCCATTGCAGTGCTTAGCCTTGCA...GTGCAATGAGTCTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCGACCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTTCTAGTCCTCTCCGAGGCTAGCATACATTTCCCTCTGGTATTCCTGGCTTTTCCCCCTCAATCATaGCGATTCTTCTCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALLVLSEASIHFPLVFLAFPPQS*RFFSPP Trigger: AGGGGGAGAGAAGAATCGCCATGATTGAGGGGGAAA...AGCCAGGAATACCAGAGGGAAATGTATGCTAGCCTCGGAGAGGACTAGAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAGTCACAGATGCCAGGCATGTGCCAGGATGGTGGCAGAGTTCCTAACCCCAGCATACATTTCCCTCTaGTATTCCTGGCTTAACACC | + |
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Preference number: 2 (lower is better) Translates to: LSHRCQACARMVAEFLTPAYISL*YSWLNT Trigger: GGTGTTAAGCCAGGAATACCAGAGGGAAATGTATGC...TGGGGTTAGGAACTCTGCCACCATCCTGGCACATGCCTGGCATCTGTGACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACGACTGACACCATTAACAGCCAAGGGTATCTTATaGCTACTTGTGCTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FRQPWLCLDRSRRLTPLTAKGIL*LLVLCF Trigger: AAAGCAGAGCACAAGTAGTCATAAGATACCCTTGGC...TGTTAATGGTGTCAGTCGTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTGGCCTTAATTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACGACACATGTCATCTTTCATaGAGGTTCAGTGTCCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: GFGLNSDSLGSVWTGPDDTCHLS*RFSVLV Trigger: AACTAGGACACTGAACCTTCATGAAAGATGACATGT...GTCGTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAATTAAGGCCAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACGACTGACACCATTAACACTTGCTTCTCTCTCTTaGTTCTTGCTCTCTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FRQPWLCLDRSRRLTPLTLASLS*FLLSCF Trigger: GAAGCAAGAGAGCAAGAAGCAAGAGAGAGAAGCAAG...TGTTAATGGTGTCAGTCGTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGGCCTGGAAGCCAGGCTTTGGGAACCAAATTAAGACCTTTGTCTTAGAATGGCTAAATTCCTATTaGTGCTCTGTCCGGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PQAWKPGFGNQIKTFVLEWLNSY*CSVRLP Trigger: GGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCA...TTCTAAGACAAAGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGGCCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTCTTGCCAGTTCCTCATGTGGGAATTAACCCACGCGGTATTCGACCTCGAAGACAACCCATTTTaGGTACCAGAAAGACTCACC | + |
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Preference number: 2 (lower is better) Translates to: VSSCQFLMWELTHAVFDLEDNPF*VPERLT Trigger: GGTGAGTCTTTCTGGTACCCAAAATGGGTTGTCTTC...GAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGGTCGCTGGCCACTCAGCTCTTATATCCCATGAGGCTAGACTCATTGCACGCCAAGGGTATCTTATaGCTACTTGTGCTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NRSLATQLLYPMRLDSLHAKGIL*LLVLCF Trigger: AAAGCAGAGCACAAGTAGTCATAAGATACCCTTGGC...GTGCAATGAGTCTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCGACCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATTCAATTGAAGCCAGCTaGGGACAGGGACCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYSIEAS*GQGPSG Trigger: GCCTGAGGGTCCCTGTCCTCAGCTGGCTTCAATTGA...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGGTCGCTGGCCACTCAGCTCTTATATCCCATGAGGCTAGACTCATTGCACTGCTTCTTGCTCTCTTaGTTCTTGCTCTCTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NRSLATQLLYPMRLDSLHCFLLS*FLLSCF Trigger: GAAGCAAGAGAGCAAGAAGCAAGAGAGCAAGAAGCA...GTGCAATGAGTCTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCGACCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTTATCTACTCACGTAGGGGTAAACCCTCGTGGCTCAGGCCATTACAGGTCTGCTTCTTGCTCTCTTaGTTCTTGCTCTCTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NFIYSRRGKPSWLRPLQVCFLLS*FLLSCF Trigger: GAAGCAAGAGAGCAAGAAGCAAGAGAGCAAGAAGCA...GACCTGTAATGGCCTGAGCCACGAGGGTTTACCCCTACGTGAGTAGATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR CAA 90 bp | GAGGATTCGCAACCTTTCAGTTTGTGTGTCTTTAAGACAGCACAATaGCCAACTGCAGTTTTGTGGCAGAATGGGCCATTGTTGTGGATC | + |
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Preference number: 2 (lower is better) Translates to: EDSQPFSLCVFKTAQ*PTAVLWQNGPLLWI Trigger: GATCCACAACAATGGCCCATTCTGCCACAAAACTGCAGTTGGCAATTGTGCTGTCTTAAAGACACACAAACTGAAAGGTTGCGAATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | CCATATAATGGGGCATCACTCAGGACTGGACATGACACTCAGTCCTACATGATCCCTTTCAACCTACATTaGTGGATAACTTTCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PYNGASLRTGHDTQSYMIPFNLH*WITFSC Trigger: GCAGGAGAAAGTTATCCAGCAATGTAGGTTGAAAGG...GATCATGTAGGACTGAGTGTCATGTCCAGTCCTGAGTGATGCCCCATTATATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTCTTGCCAGTTCCTCATGTGGGAATTAACCCACGCGGTATTCGACCTCTACAGGTCTGGCAAATaGATGTTACACATGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VSSCQFLMWELTHAVFDLYRSGK*MLHMFL Trigger: AAGAAACATGTGTAACATCCATTTGCCAGACCTGTA...GAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGTGATTAAGCCTTCCAGTAGAGTTGCCAATATTTTTCAGCAGATACAACGTAACCCACCTGACTaGACTTCCATACAACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGVIKPSSRVANIFQQIQRNPPD*TSIQPS Trigger: TGAGGGTTGTATGGAAGTCCAGTCAGGTGGGTTACG...TTGTATCTGCTGAAAAATATTGGCAACTCTACTGGAAGGCTTAATCACTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCGCTGACCAAAGGATTACCCAATTGGATCTCCTCAGCATTTTCTTTCTTTGCAATGGAAAGGCTCTaGGGCATATATGAGCCTATT | + |
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Preference number: 2 (lower is better) Translates to: LSLTKGLPNWISSAFSFFAMERL*GIYEPI Trigger: AATAGGCTCATATATGCCGCAGAGCCTTTCCATTGC...AAAGAAAGAAAATGCTGAGGAGATCCAATTGGGTAATCCTTTGGTCAGCGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGAATGCACAATTACAACGTATTGAGGATTCGCAACCTTTCAGTTTGTGTGATTCAACATTGTCTTaGGGCATGGAGTGCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LQNAQLQRIEDSQPFSLCDSTLS*GMECLG Trigger: CCCCAAGCACTCCATGCCTCAAGACAATGTTGAATC...ACACAAACTGAAAGGTTGCGAATCCTCAATACGTTGTAATTGTGCATTCTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGGGTCTTATGACTACTTGTaGTCTGCTTTCCCCGTGACG | + |
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Preference number: 2 (lower is better) Translates to: STLINMGGLFALIKRKRGSYDYL*SAFPVT Trigger: CGTCACGGGGAAAGCAGAGCACAAGTAGTCATAAGA...CCCCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTTATCTACTCACGTAGGGGTAAACCCTCGTGGCTCAGGCCATTACAGGTCTCCAATCTTACAGTTTaGCCAAAATCAATCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: NFIYSRRGKPSWLRPLQVSNLTV*PKSICC Trigger: ACAACAGATTGATTTTGGGCAAACTGTAAGATTGGA...GACCTGTAATGGCCTGAGCCACGAGGGTTTACCCCTACGTGAGTAGATAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR CCA 90 bp | CCTATGTGGCTAATGGTAAAGTGGTATCCAAACAATATAATGAAAATTCACCTCCATTGTCTTGAGGCATaGAGTGCTTGGGGGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: PMWLMVKWYPNNIMKIHLHCLEA*SAWGKP Trigger: GGGTTTCCCCCAAGCACTCCATGCCTCAAGACAATG...GAGGTGAATTTTCATTATATTGTTTGGATACCACTTTACCATTAGCCACATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTAAAAGCAGCAATCACCCACTTTGGGCAAAGTCCATATCTTTTAATTGTATAAGGCCACTAAAGTaGTGGCTGCTGCCCTATCAT | + |
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Preference number: 2 (lower is better) Translates to: RSKSSNHPLWAKSISFNCIRPLK*WLLPYH Trigger: ATGATAGGGCAGCAGCCACCACTTTAGTGGCCTTAT...ACAATTAAAAGATATGGACTTTGCCCAAAGTGGGTGATTGCTGCTTTTAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTGCTTGGACCTGTCGCTaGCCAAAGGATTACCCAATT | + |
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Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTAAWTCR*PKDYPI Trigger: AATTGGGTAATCCTTTGGTCAGCGACAGGTCCAAGC...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | CCTATGTGGCTAATGGTAAAGTGGTATCCAAACAATATAATGAAAATTCACCTCGCAGTCGTTTCTCCTTaGCAAGAAAAGAAGCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: PMWLMVKWYPNNIMKIHLAVVSP*QEKKPV Trigger: CACGGGCTTCTTTTCTTGTCAAGGAGAAACGACTGC...GAGGTGAATTTTCATTATATTGTTTGGATACCACTTTACCATTAGCCACATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGTCTTATGACTACTTGTaGTCTGCTTTCCCCGTGACG | + |
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Preference number: 2 (lower is better) Translates to: SPLSLIWVAYLLLLKEKGSYDYL*SAFPVT Trigger: CGTCACGGGGAAAGCAGAGCACAAGTAGTCATAAGA...CCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGGCCAAGGGTATCTTATaGCTACTTGTGCTCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SPLSLIWVAYLLLLKEKGAKGIL*LLVLCF Trigger: AAAGCAGAGCACAAGTAGTCATAAGATACCCTTGGC...CCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTTCTTATGACTACTTGTaGTCTGCTTTCCCCGTGACG | + |
|
Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTASYDYL*SAFPVT Trigger: CGTCACGGGGAAAGCAGAGCACAAGTAGTCATAAGA...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATTTCCAAACAAAAGAGTaGCTCTGCACATTTAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYFQTKE*LCTFKN Trigger: GTTCTTAAATGTGCAGAGTCACTCTTTTGTTTGGAA...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTTGCTTCTTGCTCTCTTaGTTCTTGCTCTCTTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTACFLLS*FLLSCF Trigger: GAAGCAAGAGAGCAAGAAGCAAGAGAGCAAGAAGCA...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTCTTGCTTCTCTCTCTTaGTTCTTGCTCTCTTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTALASLS*FLLSCF Trigger: GAAGCAAGAGAGCAAGAAGCAAGAGAGAGAAGCAAG...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTCCACTCTCATTAATATaGGTGGCCTATTTGCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTAPLSLI*VAYLLL Trigger: TAAGAGCAAATAGGCCACCCATATTAATGAGAGTGG...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTACACATGTTTCTTCCTTTGGAAAACTTCAATATCTCCATGTGTCCATTCCACTCTCATTAATATaGGTGGCCTATTTGCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: DVTHVSSFGKLQYLHVSIPLSLI*VAYLLL Trigger: TAAGAGCAAATAGGCCACCCATATTAATGAGAGTGG...AATGGACACATGGAGATATTGAAGTTTTCCAAAGGAAGAAACATGTGTAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTTGTTACAGAATTGGATaGCTGAATTTGAACAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: FPGLCVISIQYVKFTRTACYRIG*LNLNRS Trigger: GGATCTGTTCAAATTCAGCCATCCAATTCTGTAACA...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | TGGCAGGAGCAGCAGCAGGCAGTCTGTAGCGGTGATTaGTTAACCCGCTTTGGCTCCTGGCAAGTCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: WQEQQQAVCSGD*LTRFGSWQVPL Trigger: GAGTGGGACTTGCCAGGAGCCAAAGCGGGTTAACCAATCACCGCTACAGACTGCCTGCTGCTGCTCCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR CCA 72 bp | CAGGCCTACCTGGCCCCATGGCTCTGGGAAATGATTTaGCAGATAAGGCCACTAAAGTGGTGGCTGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QAYLAPWLWEMI*QIRPLKWWLLP Trigger: GGGCAGCAGCCACCACTTTAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTGCTGCCCAGTTACTTATT | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAAQLLI Trigger: AATAAGTAACTGGGCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTAGTTCCCTTCCCCCAGGCAAAACGACACGGGAGCAGGTCAGGGTTGCTCGTATCTTATGACTACTaGTGCTCTGCTTTCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLVPFPQAKRHGSRSGLLVSYDY*CSAFPV Trigger: CACGGGGAAAGCAGAGCACAAGTAGTCATAAGATAC...GAGCAACCCTGACCTGCTCCCGTGTCGTTTTGCCTGGGGGAAGGGAACTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR TCA 72 bp | GTCAACTCGGCCGATGGGCTGCAGCCAATCAAGGAGTaGCACGTCCGAGGCGAAGGAGAATTCTCCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VNSADGLQPIKE*HVRGEGEFSLK Trigger: TTTTAAGGAGAATTCTCCTTCGCCTCGGACGTGTCACTCCTTGATTGGCTGCAGCCCATCGGCCGAGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR TCA 72 bp | TATCCCATGAGGCTAGACTCATTGCACGGGATAGAGTaGGTGTGCTTCAGCAGCCCGAGAGAGTTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YPMRLDSLHGIE*VCFSSPRELQG Trigger: GCCTTGCAACTCTCTCGGGCTGCTGAAGCACACTCACTCTATCCCGTGCAATGAGTCTAGCCTCATGGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | CTCATGTTAGAGCCCATTCAGGCCTACCTGGCCCCATaGCTCTGGGAAATGATTTGGCAGATAAGGCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: LMLEPIQAYLAP*LWEMIWQIRPL Trigger: TAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTGAATGGGCTCTAACATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR TCA 72 bp | AGGGGTAAACCCTCGTGGCTCAGGCCATTACAGGTCTaGCAGATGGATGTCACGCATATTTCCTCCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGKPSWLRPLQV*QMDVTHISSFE Trigger: CTCAAAGGAGGAAATATGCGTGACATCCATCTGTCAGACCTGTAATGGCCTGAGCCACGAGGGTTTACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | TTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTaGCCGGTCGTGAGAACGCGTCTAATAACAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FAAEDSGLWCSS*PVVRTRLITAL Trigger: AAGAGCTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
||
| 3UTR CCA 72 bp | GTCAAAGCTGCTGTGAGTTCTTGCCAGTTCCTCATGTaGGAATTAACCCACGCGGTATTCGACCTCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VKAAVSSCQFLM*ELTHAVFDLYR Trigger: CCTGTAGAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCACAGCAGCTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGTTTGGCCTTAATTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACTTGCTCTCTTGCTTCTaGCTCTCTTGCTTCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: TGFGLNSDSLGSVWTGPDLLSCF*LSCFLH Trigger: GTGTAAGAAGCAAGAGAGCAAGAAGCAAGAGAGCAA...GTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAATTAAGGCCAAACCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGGTCGCTGGCCACTCAGCTCTTATATCCCATGAGGCTAGACTCATTGCACTTGCTTCTTGCTCTCTaGCTTCTTACACGCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NRSLATQLLYPMRLDSLHLLLAL*LLTRLL Trigger: GAGCAAGCGTGTAAGAAGCAAGAGAGCAAGAAGCAA...GTGCAATGAGTCTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCGACCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGGTCGCTGGCCACTCAGCTCTTATATCCCATGAGGCTAGACTCATTGCACGTATCTTATGACTACTaGTGCTCTGCTTTCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: NRSLATQLLYPMRLDSLHVSYDY*CSAFPV Trigger: CACGGGGAAAGCAGAGCACAAGTAGTCATAAGATAC...GTGCAATGAGTCTAGCCTCATGGGATATAAGAGCTGAGTGGCCAGCGACCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGTTTGGCCTTAATTCAGACAGCCTTGGCTCTGTCTGGACAGGTCCAGACATTGGATGGCTGAATTaGAACAGATCCTTCGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGFGLNSDSLGSVWTGPDIGWLN*NRSFGN Trigger: ATTCCCGAAGGATCTGTTCAAATTCAGCCATCCAAT...GTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAATTAAGGCCAAACCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| 3UTR TCA 72 bp | CCTGTACATGGCTCCTTTACCTACACACTGGGGATTTaGCCTCTATCTCCACTCTCATTAATATGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PVHGSFTYTLGI*PLSPLSLIWVA Trigger: GGCCACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGTAGGTAAAGGAGCCATGTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | AGAGTTGCAAGGCTAAGCACTGCAATGGAAAGGCTCTaGGGCATATATGAGCCTATTCTAGGGAGACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVARLSTAMERL*GIYEPILGRHV Trigger: GACATGTCTCCCTAGAATAGGCTCATATATGCCGCAGAGCCTTTCCATTGCAGTGCTTAGCCTTGCAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTGCTGGATAACTTTCTCCTGCAGCTCTTAAATCTGATCCCTTTCCCCCTCCCTGGAAGCCAGGCTTaGGGAACCAAATTAAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: TLLDNFLLQLLNLIPFPLPGSQA*GTKLRP Trigger: AGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGG...GAGGGGGAAAGGGATCAGATTTAAGAGCTGCAGGAGAAAGTTATCCAGCAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTATCTACTCACGTAGGGGTAAACCCTCGTGGCTCAGGCCATTACAGGTCTTGCTCTCTTGCTTCTaGCTCTCTTGCTTCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: NFIYSRRGKPSWLRPLQVLLSCF*LSCFLH Trigger: GTGTAAGAAGCAAGAGAGCAAGAAGCAAGAGAGCAA...GACCTGTAATGGCCTGAGCCACGAGGGTTTACCCCTACGTGAGTAGATAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | TCAACCTTGGACTTTAGCATCCCTGGGTGTAACACGTaGTACACTGACACAAGGCATTCATTCATAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: STLDFSIPGCNT*YTDTRHSFIAG Trigger: TCCTGCTATGAATGAATGCCTTGTGTCAGTGTAGCACGTGTTACACCCAGGGATGCTAAAGTCCAAGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR CCA 72 bp | AAAGCCTCACATGTGATTCAACATTGTCTTGAGGCATaGAGTGCTTGGGGGAAACCCAGACTCCTTAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: KASHVIQHCLEA*SAWGKPRLLKT Trigger: AGTCTTAAGGAGTCTGGGTTTCCCCCAAGCACTCCATGCCTCAAGACAATGTTGAATCACATGTGAGGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGACTACAGTCATAGATGAACAGGCCTCAGCTAATGTCAAGATACAGGGAGTATCTTATGACTACTaGTGCTCTGCTTTCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVIDEQASANVKIQGVSYDY*CSAFPV Trigger: CACGGGGAAAGCAGAGCACAAGTAGTCATAAGATAC...TCCCTGTATCTTGACATTAGCTGAGGCCTGTTCATCTATGACTGTAGTCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATCCCCCTCTCTGTCCCTaGCCCGTACAATCTAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYPPLCP*PVQSKS Trigger: ACTTTTAGATTGTACGGGCAAGGGACAGAGAGGGGG...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR TCA 72 bp | AAACAAATAATCTGCGCATGTGCCAAGGGTATCTTATaGCTACTTGTGCTCTGCTTTCCCCGTGACGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQIICACAKGIL*LLVLCFPRDVN Trigger: GTTGACGTCACGGGGAAAGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATGCGCAGATTATTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | AATCACTCCATCACTTCTGTCCTGAAGCCTTCACCCTaGTCCAATATTCTGAATTATTATGGTGCCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: NHSITSVLKPSP*SNILNYYGACH Trigger: GTGGCAGGCACCATAATAATTCAGAATATTGGAGCAGGGTGAAGGCTTCAGGACAGAAGTGATGGAGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
||
| 3UTR GCA 72 bp | ACATTGTTACTCAATGTCAAAGCTGCTGTGAGTTCTTaGCAGTTCCTCATGTGGGAATTAACCCACGCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TLLLNVKAAVSS*QFLMWELTHAV Trigger: TACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCACAGCAGCTTTGACATTGAGTAACAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | GTCTTTAAGACAGCACAATTGCCAACTGCAGTTTTGTaGCAGAATGGGCCATTGTTGTGGATCCATCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VFKTAQLPTAVL*QNGPLLWIHPN Trigger: GTTTGGATGGATCCACAACAATGGCCCATTCTGCCACAAAACTGCAGTTGGCAATTGTGCTGTCTTAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCGCTGACCAAAGGATTACCCAATTGGATCTCCTCAGCATTTTCTTTCTTTTTGCTTCTTGCTCTCTaGCTTCTTACACGCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLTKGLPNWISSAFSFFLLLAL*LLTRLL Trigger: GAGCAAGCGTGTAAGAAGCAAGAGAGCAAGAAGCAA...AAAGAAAGAAAATGCTGAGGAGATCCAATTGGGTAATCCTTTGGTCAGCGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCGCTGACCAAAGGATTACCCAATTGGATCTCCTCAGCATTTTCTTTCTTTTCTCTCTCTTGCTTCTaGCTCTCTTGCTTCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLTKGLPNWISSAFSFFSLSCF*LSCFLL Trigger: GAGCAAGAAGCAAGAGAGCAAGAAGCAAGAGAGAGA...AAAGAAAGAAAATGCTGAGGAGATCCAATTGGGTAATCCTTTGGTCAGCGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | AAAGAAGCCCGTGACATTGTTACTCAATGTCAAAGCTaGTGTGAGTTCTTGCCAGTTCCTCATGTGGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: KEARDIVTQCQS*CEFLPVPHVGI Trigger: AATTCCCACATGAGGAACTGGCAAGAACTCACAGCAGCTTTGACATTGAGTAACAATGTCACGGGCTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGGGTATCTTGCTCTCTTGCTTCTaGCTCTCTTGCTTCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: TSCVLSGKQIICACAKGILLSCF*LSCFLH Trigger: GTGTAAGAAGCAAGAGAGCAAGAAGCAAGAGAGCAA...GATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR TCA 72 bp | GGAGATACACTTTGCTGTGGATTAGTGTTGCTTCTTTaGTTGGTCTGTAAGCTTAAGGCCCAAACTAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GDTLCCGLVLLL*LVCKLKAQTRR Trigger: TCTCCTAGTTTGGGCCTTAAGCTTACAGACCAATCAAAGAAGCAACACTAATCCACAGCAAAGTGTATCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR GCA 72 bp | AACCTTTCAGTTTGTGTGTCTTTAAGACAGCACAATTaGCAACTGCAGTTTTGTGGCAGAATGGGCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLSVCVSLRQHN*QLQFCGRMGHC Trigger: ACAATGGCCCATTCTGCCACAAAACTGCAGTTGGCAATTGTGCTGTCTTAAAGACACACAAACTGAAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGGGTCTCTCTCTTGCTTCTaGCTCTCTTGCTTCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: STLINMGGLFALIKRKRGSLSCF*LSCFLL Trigger: GAGCAAGAAGCAAGAGAGCAAGAAGCAAGAGAGAGA...CCCCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATGTTTCTTCCTTTGGAAAACTTCAATATCTCCATGTGTCCATTGACACATTTAATTCAGACAGCCTaGGCTCTGTCTGGACAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HMFLPLENFNISMCPLTHLIQTA*ALSGQV Trigger: GACCTGTCCAGACAGAGCCAAGGCTGTCTGAATTAA...ATGTGTCAATGGACACATGGAGATATTGAAGTTTTCCAAAGGAAGAAACATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTTCTCTCTCTTGCTTCTaGCTCTCTTGCTTCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FPGLCVISIQYVKFTRTASLSCF*LSCFLL Trigger: GAGCAAGAAGCAAGAGAGCAAGAAGCAAGAGAGAGA...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | ATCCATCCAAACGTATCCCCAGCTAAAATAATAGATTaGTATCCTGATGCAATTGCACAGCTTGCCCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHPNVSPAKIID*YPDAIAQLALK Trigger: TTTAAGGGCAAGCTGTGCAATTGCATCAGGATACCAATCTATTATTTTAGCTGGGGATACGTTTGGATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATGTTTCTTCCTTTGGAAAACTTCAATATCTCCATGTGTCCATTGACACATATTGGATGGCTGAATTaGAACAGATCCTTCGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HMFLPLENFNISMCPLTHIGWLN*NRSFGN Trigger: ATTCCCGAAGGATCTGTTCAAATTCAGCCATCCAAT...ATGTGTCAATGGACACATGGAGATATTGAAGTTTTCCAAAGGAAGAAACATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CCA 72 bp | ACAAGGCATTCATTCATAGCAGGAAAGCTACAGAGTTaGAGTAAGAAGTCACATAGAATCTTTCAGTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: TRHSFIAGKLQS*SKKSHRIFQFI Trigger: AATGAACTGAAAGATTCTATGTGACTTCTTACTCCAACTCTGTAGCTTTCCTGCTATGAATGAATGCCTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGTCGTGAGAACAGCCACCGCCTCCTCTaGCTGCTGGGCAGAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCRRRFWSVVFFLAGRENSHRLL*LLGRDV Trigger: TACGTCTCTGCCCAGCAGCCAGAGGAGGCGGTGGCT...GTTCTCACGACCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCCTCCCGAGTGCTGCCCAGTTACTTATTGGGCAGCAGCCCCACCCACCGTATATGGGCAATACTaGGGTATGGCAGAGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPECCPVTYWAAAPPTVYGQY*GMAEKG Trigger: TCCTTTCTCTGCCATACCTCAGTATTGCCCATATAC...GGTGGGTGGGGCTGCTGCCCAATAAGTAACTGGGCAGCACTCGGGAGGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | GCACTTCTAGTCCTCTCCGAGGCTAGCATACATTTCCCTCTGGTATTCCTGGCTCGACCACAGCGCCTGTaGGGAGCAGGAACAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLVLSEASIHFPLVFLARPQRL*GAGTKP Trigger: GGGCTTTGTTCCTGCTCCTCACAGGCGCTGTGGTCG...AGCCAGGAATACCAGAGGGAAATGTATGCTAGCCTCGGAGAGGACTAGAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTCTAGTCCTCTCCGAGGCTAGCATACATTTCCCTCTGGTATTCCTGGCTGCCTCCTCTGGCTGCTaGGCAGAGACGTACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLVLSEASIHFPLVFLAASSGC*AETYQP Trigger: AGGCTGGTACGTCTCTGCCCAGCAGCCAGAGGAGGC...AGCCAGGAATACCAGAGGGAAATGTATGCTAGCCTCGGAGAGGACTAGAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCTTGCCAGTTCCTCATGTGGGAATTAACCCACGCGGTATTCGACCTCGCCTCCTCTGGCTGCTaGGCAGAGACGTACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSCQFLMWELTHAVFDLASSGC*AETYQP Trigger: AGGCTGGTACGTCTCTGCCCAGCAGCCAGAGGAGGC...GAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CAA 72 bp | TCAGGCCTACCTGGCCCCATGGCTCTGGGAAATGATTaGGCAGATAAGGCCACTAAAGTGGTGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLPGPMALGND*ADKATKVVAAA Trigger: GGCAGCAGCCACCACTTTAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| CDS-3UTR GCA 90 bp | ACATTGCTGGATAACTTTCTCCTGCAGCTCTTAAATCTGATCCCTTTCCCCCTCCGGACTCCACTCGTCTaGAGCCACCGCCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLDNFLLQLLNLIPFPLRTPLV*SHRLLW Trigger: CCAGAGGAGGCGGTGGCTGCAGACGAGTGGAGTCCG...GAGGGGGAAAGGGATCAGATTTAAGAGCTGCAGGAGAAAGTTATCCAGCAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAATGGGGCATCACTCAGGACTGGACATGACACTCAGTCCTACATGATCAGCCACCGCCTCCTCTaGCTGCTGGGCAGAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: PYNGASLRTGHDTQSYMISHRLL*LLGRDV Trigger: TACGTCTCTGCCCAGCAGCCAGAGGAGGCGGTGGCT...GATCATGTAGGACTGAGTGTCATGTCCAGTCCTGAGTGATGCCCCATTATATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTGACTACAGTCATAGATGAACAGGCCTCAGCTAATGTCAAGATACAGGGACGGACTCCACTCGTCTaGAGCCACCGCCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVIDEQASANVKIQGRTPLV*SHRLLW Trigger: CCAGAGGAGGCGGTGGCTGCAGACGAGTGGAGTCCG...TCCCTGTATCTTGACATTAGCTGAGGCCTGTTCATCTATGACTGTAGTCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTCCCATATACAATCTGCCATTCTTCCCAGGATTCTATTAGCCTCTGGCCGGACTCCACTCGTCTaGAGCCACCGCCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSHIQSAILPRILLASGRTPLV*SHRLLW Trigger: CCAGAGGAGGCGGTGGCTGCAGACGAGTGGAGTCCG...GCCAGAGGCTAATAGAATCCTGGGAAGAATGGCAGATTGTATATGGGAAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
||
| 3UTR CAA 72 bp | ATCCCAATAGCAGACTGCTGTGAGTTCAAGGCCAGCTaGGTCTACACAGCTAGGTCCTGCTTCAGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPIADCCEFKAS*VYTARSCFRHR Trigger: TCTGTGTCTGAAGCAGGACCTAGCTGTGTAGACCAAGCTGGCCTTGAACTCACAGCAGTCTGCTATTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGAGTTCAAGGCCAGCTTGGTCTACACAGCTAGGTCCTGCTTCAGACACAGAGGTAGCCAAAGAGTaGAGACACAAAGTAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSSRPAWSTQLGPASDTEVAKE*RHKVNQ Trigger: CTGGTTTACTTTGTGTCTGCACTCTTTGGCTACCTC...TGTGTCTGAAGCAGGACCTAGCTGTGTAGACCAAGCTGGCCTTGAACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR CAA 72 bp | CCCAACCCCCAGGGCTGCTTTCCCTTTCAACCTACATaGCTGGATAACTTTCTCCTGCAGCTCTTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNPQGCFPFQPT*LDNFLLQLLNL Trigger: CAGATTTAAGAGCTGCAGGAGAAAGTTATCCAGCAATGTAGGTTGAAAGGGAAAGCAGCCCTGGGGGTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | CCATATAATGGGGCATCACTCAGGACTGGACATGACACTCAGTCCTACATGATCTATCTTGGGAAGCAGTaGGAGAGGAAACACGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYNGASLRTGHDTQSYMIYLGKQ*ERKHDA Trigger: GGCATCGTGTTTCCTCTCTCACTGCTTCCCAAGATA...GATCATGTAGGACTGAGTGTCATGTCCAGTCCTGAGTGATGCCCCATTATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | GCACTTCTAGTCCTCTCCGAGGCTAGCATACATTTCCCTCTGGTATTCCTGGCTCTGCATCCTTTTCTTTaGAGGGCTTTGAAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALLVLSEASIHFPLVFLALHPFL*RALKLT Trigger: TGTGAGCTTCAAAGCCCTTCAAAGAAAAGGATGCAG...AGCCAGGAATACCAGAGGGAAATGTATGCTAGCCTCGGAGAGGACTAGAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGAGTTCAAGGCCAGCTTGGTCTACACAGCTAGGTCCTGCTTCAGACACATATTCTGAATTATTATaGTGCCTGCCACCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSSRPAWSTQLGPASDTYSELL*CLPPPP Trigger: AGGTGGTGGTGGCAGGCACCATAATAATTCAGAATA...TGTGTCTGAAGCAGGACCTAGCTGTGTAGACCAAGCTGGCCTTGAACTCACAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGGCCTCCTCTGGCTGCTaGGCAGAGACGTACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLIWVAYLLLLKEKGASSGC*AETYQP Trigger: AGGCTGGTACGTCTCTGCCCAGCAGCCAGAGGAGGC...CCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAATGGGGCATCACTCAGGACTGGACATGACACTCAGTCCTACATGATCGGAAAAAGCCATGGTTaGTATGGCGTAAACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYNGASLRTGHDTQSYMIGKSHG*YGVNAL Trigger: GAGAGCGTTTACGCCATACCAACCATGGCTTTTTCC...GATCATGTAGGACTGAGTGTCATGTCCAGTCCTGAGTGATGCCCCATTATATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGTCACAGATGCCAGGCATGTGCCAGGATGGTGGCAGAGTTCCTAACCCCAGTTGCGTTTGAAATCTaGAAGACTTCATTGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHRCQACARMVAEFLTPVAFEI*KTSLMQ Trigger: TTGCATCAATGAAGTCTTTCAGATTTCAAACGCAAC...TGGGGTTAGGAACTCTGCCACCATCCTGGCACATGCCTGGCATCTGTGACTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGCCTGGAAGCCAGGCTTTGGGAACCAAATTAAGACCTTTGTCTTAGAATCTGAATTATTATGGTaGCTGCCACCACCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQAWKPGFGNQIKTFVLESELLW*LPPPPF Trigger: GAAAGGTGGTGGTGGCAGGCACCATAATAATTCAGA...TTCTAAGACAAAGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGGCCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGCCTGGAAGCCAGGCTTTGGGAACCAAATTAAGACCTTTGTCTTAGAAGAAAGGAAAAAGCCATaGTTGGTATGGCGTAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PQAWKPGFGNQIKTFVLEERKKP*LVWRKR Trigger: GCGTTTACGCCATACCAACCATGGCTTTTTCCTTTC...TTCTAAGACAAAGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGGCCTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | CCATATAATGGGGCATCACTCAGGACTGGACATGACACTCAGTCCTACATGATCGGCAATACTGAGGTATaGCAGAGAAAGGAAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYNGASLRTGHDTQSYMIGNTEV*QRKEKA Trigger: GGCTTTTTCCTTTCTCTGCCATACCTCAGTATTGCC...GATCATGTAGGACTGAGTGTCATGTCCAGTCCTGAGTGATGCCCCATTATATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR CAA 72 bp | TCCTGTACATGGCTCCTTTACCTACACACTGGGGATTaGACCTCTATCTCCACTCTCATTAATATGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCTWLLYLHTGD*TSISTLINMGG Trigger: GCCACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGTAGGTAAAGGAGCCATGTACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR CAA 72 bp | TCTGGACAGGTCCAGACGACTGACACCATTAACACTTaGTCAGCCTCAGTGACTACAGTCATAGATGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGQVQTTDTINT*SASVTTVIDEQ Trigger: CTGTTCATCTATGACTGTAGTCACTGAGGCTGACAAAGTGTTAATGGTGTCAGTCGTCTGGACCTGTCCAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000153941.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGCCTGGAAGCCAGGCTTTGGGAACCAAATTAAGACCTTTGTCTTAGAACTTTGTCATAAAAAGTaGGGTAGCCAAAGAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAWKPGFGNQIKTFVLELCHKK*GSQRVQ Trigger: CTGCACTCTTTGGCTACCTCACTTTTTATGACAAAG...TTCTAAGACAAAGGTCTTAATTTGGTTCCCAAAGCCTGGCTTCCAGGCCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACTCTCATTAATATGGGTGGCCTATTTGCTCTTATTAAAAGAAAAAGGGCCCAAGCAAGCGGTGTaGATGCACATGGCAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLIWVAYLLLLKEKGPKQAV*MHMASR Trigger: CCTGCTTGCCATGTGCATCCACACCGCTTGCTTGGG...CCCTTTTTCTTTTAATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
||
| 3UTR CAA 72 bp | AATCAGTGGTGGCCAAGAGAAACTTTAATGTCAACCTaGGACTTTAGCATCCCTGGGTGTAACACGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NQWWPRETLMST*DFSIPGCNTCY Trigger: GTAGCACGTGTTACACCCAGGGATGCTAAAGTCCAAGGTTGACATTAAAGTTTCTCTTGGCCACCACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTTCAAGCATGTCGATGTaGTGGCGCCAACCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKMAKFLLLLCPASLLTVSSMSM*WRQPHQ Trigger: TTGGTGTGGTTGGCGCCAGCACATCGACATGCTTGA...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCGGGATTGTGTGTTATTTCCATTCAGTATGTTAAATTTACTAGGACAGCTGGGCAGCAGTGTGAGTaGAGAGCCGTGGAGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPGLCVISIQYVKFTRTAGQQCE*RAVERL Trigger: TAACCTCTCCACGGCTCTCCACTCACACTGCTGCCC...AGCTGTCCTAGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058139.14 |
||
| 3UTR CAA 72 bp | CAACCTTTCAGTTTGTGTGTCTTTAAGACAGCACAATaGCCAACTGCAGTTTTGTGGCAGAATGGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPFSLCVFKTAQ*PTAVLWQNGPL Trigger: CAATGGCCCATTCTGCCACAAAACTGCAGTTGGCAATTGTGCTGTCTTAAAGACACACAAACTGAAAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CAA 72 bp | GTCCTTGATAATAAATGGTATGGCCCGGATCCTATTTaGATAAGATCCAGGGGAGCTATCTGTGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLDNKWYGPDPI*IRSRGAICVFP Trigger: TGGGAAAACACAGATAGCTCCCCTGGATCTTATCAAAATAGGATCCGGGCCATACCATTTATTATCAAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| 3UTR CAA 72 bp | CTTCCTTTGGAAAACTTCAATATCTCCATGTGTCCATaGACACATGTTCTGGCATCATGTTTGCCTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLENFNISMCP*THVLASCLPLR Trigger: ACGGAGAGGCAAACATGATGCCAGAACATGTGTCAATGGACACATGGAGATATTGAAGTTTTCCAAAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153941.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATTTCTTTGAAGGGCTTTaGAGCTCACAGTATATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYFFEGL*SSQYMG Trigger: GCCCATATACTGTGAGCTTCAAAGCCCTTCAAAGAA...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTAATTATTATGGTGCCTaGCACCACCACCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKMAKFLLLLCPASLLTVNYYGA*HHHLSR Trigger: CCTGGAAAGGTGGTGGTGGCAGGCACCATAATAATT...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATGAAGCTCACAGTATATaGGCAATACTGAGGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYEAHSI*AILRYG Trigger: GCCATACCTCAGTATTGCCCATATACTGTGAGCTTC...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTACGCAATCGCTGTGTTaGTCACATTCTGCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKMAKFLLLLCPASLLTVTQSLC*SHSASF Trigger: AAAGGATGCAGAATGTGACCAACACAGCGATTGCGT...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATAGGAGAACGGGTAATTaGAGAACAGGATCATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYRRTGN*RTGSSL Trigger: TAATGATGATCCTGTTCTCCAATTACCCGTTCTCCT...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKMAKFLLLLCPASLLTVIAPIF*IIMVPA Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATGTCATCTGTTGCGTTTaGAATCTGAAAGACTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYVICCV*NLKDFI Trigger: AATGAAGTCTTTCAGATTTCAAACGCAACAGATGAC...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATAGAAAAATGATAGACTaGTTGTGTAGCCAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYRKMID*LCSQES Trigger: GCTTTCTTGGCTACACAAGCAGTCTATCATTTTTCT...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTCGTAAACGCTCTCTTTaGAGAAATGAAAGAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKMAKFLLLLCPASLLTVRKRSL*RNERAL Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGCGTTTACG...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
||
| 3UTR CAA 72 bp | AAAATGGGTGGGATTAATATTATTTGGAGATACACTTaGCTGTGGATTAGTGTTGCTTCTTTGATTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMGGINIIWRYT*LWISVASLIGL Trigger: CAGACCAATCAAAGAAGCAACACTAATCCACAGCAAAGTGTATCTCCAAATAATATTAATCCCACCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| 3UTR CAA 72 bp | ATAACTCAGCAGGGATGTGAACAAAAGTTTCCGGGATaGTGTGTTATTTCCATTCAGTATGTTAAATTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ITQQGCEQKFPG*CVISIQYVKFT Trigger: AGTAAATTTAACATACTGAATGGAAATAACACACAATCCCGGAAACTTTTGTTCACATCCCTGCTGAGTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058139.14 ENSMUST00000101313.4 ENSMUST00000153941.8 |
||
| CDS GCA 90 bp | AGAGACCAAAGGAAGCACCGGAGGATCCCTGCCTGTGAGGTTCGTTaGTTAGCAACGGACTCCACTCGTCTGCAGCCACCGCCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDQRKHRRIPACEVR*LATDSTRLQPPPPL Trigger: CAGAGGAGGCGGTGGCTGCAGACGAGTGGAGTCCGTTGCTAAGCAACGAACCTCACAGGCAGGGATCCTCCGGTGCTTCCTTTGGTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058139.14 ENSMUST00000122920.8 ENSMUST00000126488.8 ENSMUST00000140523.8 ENSMUST00000153941.8 |
||
| CDS TCA 90 bp | TTAAAGACGGAGAGACCAAAGGAAGCACCGGAGGATCCCTGCCTGTaGGGTTCGTTGCTTAGCAACGGACTCCACTCGTCTGCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LKTERPKEAPEDPCL*GSLLSNGLHSSAAT Trigger: GGTGGCTGCAGACGAGTGGAGTCCGTTGCTAAGCAACGAACCTCACAGGCAGGGATCCTCCGGTGCTTCCTTTGGTCTCTCCGTCTTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058139.14 ENSMUST00000122920.8 ENSMUST00000126488.8 ENSMUST00000140523.8 ENSMUST00000153941.8 |
||
| CDS GCA 90 bp | AGAGCCGTGGAGAGGTTAGTTCAGGACCCAAGCAAGCGGTGTGGATaGACATGGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RAVERLVQDPSKRCG*TWQAGDGLSKKPGE Trigger: CTCTCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCTTGCTTGGGTCCTGAACTAACCTCTCCACGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000126488.8 |
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| CDS GCA 90 bp | AAGCGAAGAGTCCCAGATCTTCGTAAGACGTCACGGCGGTGTGGATaGACATGGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KRRVPDLRKTSRRCG*TWQAGDGLSKKPGE Trigger: CTCTCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCCGTGACGTCTTACGAAGATCTGGGACTCTTCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101313.4 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCTCCCGAGTGCTGCCCAGTTACTTATTGGGCAGCAGCCCCACCCACCAAAATGATAGACTGCTaGTGTAGCCAAGAAAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: PLPPECCPVTYWAAAPPTKMIDC*CSQESL Trigger: TAGGCTTTCTTGGCTACACAAGCAGTCTATCATTTT...GGTGGGTGGGGCTGCTGCCCAATAAGTAACTGGGCAGCACTCGGGAGGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS CCA 90 bp | GTGGAGAGGTTAGTTCAGGACCCAAGCAAGCGGTGTGGATGCACATaGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGAGAGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: VERLVQDPSKRCGCT*QAGDGLSKKPGEQQ Trigger: TTGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCTTGCTTGGGTCCTGAACTAACCTCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000126488.8 |
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| CDS CCA 90 bp | AGAGTCCCAGATCTTCGTAAGACGTCACGGCGGTGTGGATGCACATaGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGAGAGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: RVPDLRKTSRRCGCT*QAGDGLSKKPGEQQ Trigger: TTGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCCGTGACGTCTTACGAAGATCTGGGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101313.4 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS CCA 90 bp | GCGCTGCTGTGGTCAGGGAATGTCGGATCCAGGAGAACGGGTAATTaGAGAACAGGATCATCATTAAAGCTTTCCTGGCAGGGAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: ALLWSGNVGSRRTGN*RTGSSLKLSWQGSG Trigger: TCCACTTCCCTGCCAGGAAAGCTTTAATGATGATCCTGTTCTCCAATTACCCGTTCTCCTGGATCCGACATTCCCTGACCACAGCAGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTTCAAGGCCAGCTTGGTCTACACAGCTAGGTCCTGCTTCAGACACATCTGCATCCTTTTCTTaGAAGGGCTTTGAAGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: AVSSRPAWSTQLGPASDTSASFS*KGFEAH Trigger: GTGAGCTTCAAAGCCCTTCAAAGAAAAGGATGCAGA...TGTGTCTGAAGCAGGACCTAGCTGTGTAGACCAAGCTGGCCTTGAACTCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTTCAAGGCCAGCTTGGTCTACACAGCTAGGTCCTGCTTCAGACACAAGTCATCTGTTGCGTTaGAAATCTGAAAGACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: AVSSRPAWSTQLGPASDTSHLLR*KSERLH Trigger: ATGAAGTCTTTCAGATTTCAAACGCAACAGATGACT...TGTGTCTGAAGCAGGACCTAGCTGTGTAGACCAAGCTGGCCTTGAACTCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS-3UTR CAA 90 bp | GCACTTCTAGTCCTCTCCGAGGCTAGCATACATTTCCCTCTGGTATTCCTGGCTGTTTACAGTCATCTGTaGCGTTTGAAATCTGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: ALLVLSEASIHFPLVFLAVYSHL*RLKSER Trigger: TCTTTCAGATTTCAAACGCAACAGATGACTGTAAAC...AGCCAGGAATACCAGAGGGAAATGTATGCTAGCCTCGGAGAGGACTAGAAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS-3UTR CAA 90 bp | AGTAGAAAGGTCTTCCATGAGGTGAGTGGATCAACAAACATGATACAGCCATATAGGAAAAAGCCATGGTaGGTATGGCGTAAACGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRKVFHEVSGSTNMIQPYRKKPW*VWRKRS Trigger: AGAGCGTTTACGCCATACCAACCATGGCTTTTTCCT...ATATGGCTGTATCATGTTTGTTGATCCACTCACCTCATGGAAGACCTTTCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS-3UTR CAA 90 bp | ATTAAAATGGCTAAATTCCTATTGCTGCTCTGTCCGGCTTCCCTATTAACAGTTAACGCAATCGCTGTGTaGGTCACATTCTGCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: IKMAKFLLLLCPASLLTVNAIAV*VTFCIL Trigger: AAGGATGCAGAATGTGACCAACACAGCGATTGCGTT...AACTGTTAATAGGGAAGCCGGACAGAGCAGCAATAGGAATTTAGCCATTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS GCA 72 bp | GGACTCCACTCGTCTGCAGCCACCGCCTCCTCTGGCTaGTGGGCAGAGACGTACCAGCCTGGCTCCGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLHSSAATASSG*WAETYQPGSAW Trigger: CCAAGCGGAGCCAGGCTGGTACGTCTCTGCCCAGCAGCCAGAGGAGGCGGTGGCTGCAGACGAGTGGAGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058139.14 ENSMUST00000122920.8 ENSMUST00000126488.8 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS CCA 72 bp | CGCCTCCTCTGGCTGCTGGGCAGAGACGTACCAGCCTaGCTCCGCTTGGATGCTGTGCCGGGACGCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RLLWLLGRDVPA*LRLDAVPGRLH Trigger: ATGCAGGCGTCCCGGCACAGCATCCAAGCGGAGCCAGGCTGGTACGTCTCTGCCCAGCAGCCAGAGGAGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058139.14 ENSMUST00000122920.8 ENSMUST00000126488.8 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS GCA 72 bp | GTCCCAGATCTTCGTAAGACGTCACGGCGGTGTGGATaGACATGGCAAGCAGGAGATGGACTGAGTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VPDLRKTSRRCG*TWQAGDGLSKK Trigger: CTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCCGTGACGTCTTACGAAGATCTGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101313.4 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS CCA 72 bp | GATCTTCGTAAGACGTCACGGCGGTGTGGATGCACATaGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: DLRKTSRRCGCT*QAGDGLSKKPG Trigger: TCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCCGTGACGTCTTACGAAGATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101313.4 ENSMUST00000140523.8 ENSMUST00000153941.8 |
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| CDS GCA 72 bp | GAGAGGTTAGTTCAGGACCCAAGCAAGCGGTGTGGATaGACATGGCAAGCAGGAGATGGACTGAGTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ERLVQDPSKRCG*TWQAGDGLSKK Trigger: CTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCTTGCTTGGGTCCTGAACTAACCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000126488.8 |
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| CDS CCA 72 bp | TTAGTTCAGGACCCAAGCAAGCGGTGTGGATGCACATaGCAAGCAGGAGATGGACTGAGTAAGAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LVQDPSKRCGCT*QAGDGLSKKPG Trigger: TCCTGGCTTCTTACTCAGTCCATCTCCTGCTTGCCATGTGCATCCACACCGCTTGCTTGGGTCCTGAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058139.14 ENSMUST00000126488.8 |
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| CDS CCA 72 bp | TGGTCAGGGAATGTCGGATCCAGGAGAACGGGTAATTaGAGAACAGGATCATCATTAAAGCTTTCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WSGNVGSRRTGN*RTGSSLKLSWQ Trigger: CTGCCAGGAAAGCTTTAATGATGATCCTGTTCTCCAATTACCCGTTCTCCTGGATCCGACATTCCCTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS TCA 72 bp | GCTTGTGTAGCCAAGAAAGCCTATCTTGGGAAGCAGTaGGAGAGGAAACACGATGCCTACACAGATGATGAT | + |
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Preference number: 6 (lower is better) Translates to: ACVAKKAYLGKQ*ERKHDAYTDDD Trigger: ATCATCATCTGTGTAGGCATCGTGTTTCCTCTCTCACTGCTTCCCAAGATAGGCTTTCTTGGCTACACAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS CCA 72 bp | ATGATAGACTGCTTGTGTAGCCAAGAAAGCCTATCTTaGGAAGCAGTGAGAGAGGAAACACGATGCCTACAC | + |
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Preference number: 6 (lower is better) Translates to: MIDCLCSQESLS*EAVREETRCLH Trigger: GTGTAGGCATCGTGTTTCCTCTCTCACTGCTTCCCAAGATAGGCTTTCTTGGCTACACAAGCAGTCTATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS TCA 72 bp | AGTCATCTGTTGCGTTTGAAATCTGAAAGACTTCATTaGTGCAATCTAAGGTCACAGGACAAGGAACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SHLLRLKSERLH*CNLRSQDKERP Trigger: GGGCCGTTCCTTGTCCTGTGACCTTAGATTGCATCAATGAAGTCTTTCAGATTTCAAACGCAACAGATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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| CDS CAA 90 bp | TGGTTGGTATGGCGTAAACGCTCTCTTTGGAGAAATGAAAGAGCTTaGGTTTACAGTCATCTGTTGCGTTTGAAATCTGAAAGACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: WLVWRKRSLWRNERA*VYSHLLRLKSERLH Trigger: ATGAAGTCTTTCAGATTTCAAACGCAACAGATGACTGTAAACCAAAGCTCTTTCATTTCTCCAAAGAGAGCGTTTACGCCATACCAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140523.8 |
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