Pregenerated sensors for SLC38A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031170Ensembl transcript IDs: ENSMUST00000033512.11, ENSMUST00000115590.2, ENSMUST00000115591.8, ENSMUST00000127103.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCATCTAGGAAGTaGGAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: FPFSARVTLTASSRK*ELCGLRTLLRTWPP Trigger: GGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTCTCACTTCCTAGATGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| 3UTR CCA 72 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTaGATTCCCTCGTATACACGCGTGAGCATAGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PCPRQEGLRKVT*IPSYTRVSIGA Trigger: AGCCCCTATGCTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| 3UTR TCA 72 bp | AGCGCCAGGGTAACCCTAACAGCTTCATCTAGGAAGTaGGAACTATGTGGGCTAAGAACTCTTCTAAGGACC | + |
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Preference number: 3 (lower is better) Translates to: SARVTLTASSRK*ELCGLRTLLRT Trigger: GGTCCTTAGAAGAGTTCTTAGCCCACATAGTTCTCACTTCCTAGATGAAGCTGTTAGGGTTACCCTGGCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGACCAGACATACGGCTCTaGCCTGTGGCCCAGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LASHTSSHEVGSEATLRGPDIRL*PVAQLA Trigger: TGCCAACTGGGCCACAGGCCAGAGCCGTATGTCTGG...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | GCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAAGGGGGCCAAAAAGAAGATaGCTCCAGTGTGTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: ASHTSSHEVGSEATLRGRGPKRR*LQCVPW Trigger: CCATGGCACACACTGGAGTCATCTTCTTTTTGGCCC...CCTTCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAGGGCCAAAAAGAAGATaGCTCCAGTGTGTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LASHTSSHEVGSEATLRGGPKRR*LQCVPW Trigger: CCATGGCACACACTGGAGTCATCTTCTTTTTGGCCC...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGACAGTGCTGTAGAAGGTaGGGTATCCAAAGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASHTSSHEVGSEATLRGQCCRR*GIQRSL Trigger: CAGCGACCTTTGGATACCTCACCTTCTACAGCACTG...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAGCACAACAGGCACAGTaGGGGTTACTGCAAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LASHTSSHEVGSEATLRGAQQAQ*GLLQAV Trigger: TACTGCTTGCAGTAACCCTCACTGTGCCTGTTGTGC...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAGATGACTCCAGTGTGTaGCATGGCATAAGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASHTSSHEVGSEATLRGDDSSV*HGISQS Trigger: GGACTGGCTTATGCCATGGCACACACTGGAGTCATC...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAAGGCCCTCAGGGTCCATGTaGAGGAAGGTGCCAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASHTSSHEVGSEATLRGRPSGSM*RKVPIT Trigger: TGTTATTGGCACCTTCCTGCACATGGACCCTGAGGG...CCTTCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGGGATGCCTACAACACTaGCACAGGTCAGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRQEGLRKVTWIPSYTRVGCLQH*HRSAGG Trigger: ACCTCCTGCTGACCTGTGCCAGTGTTGTAGGCATCC...CACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGCTCCGATGGACATGTTaGCCACAGCTTGCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRQEGLRKVTWIPSYTRVLRWTC*PQLASC Trigger: GCAGGATGCAAGCTGTGGCCAACATGTCCATCGGAG...CACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGGCAGAATCAAGGCAATaGCCACATGGCGTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRQEGLRKVTWIPSYTRVAESRQ*PHGVAS Trigger: GCTGGCTACGCCATGTGGCCATTGCCTTGATTCTGC...CACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | GAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCTCTCCCAGACATACGGCTCTaGCCTGTGGCCCAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELCGLRTLLRTWPPIPPLPDIRL*PVAQLA Trigger: TGCCAACTGGGCCACAGGCCAGAGCCGTATGTCTGG...GAGAGGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| 3UTR CAA 72 bp | TCCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTaGGATTCCCTCGTATACACGCGTGAGCATAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSQAGRTQESD*DSLVYTREHRG Trigger: GCCCCTATGCTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAAGGGATATCGCGGATGGTTaGCACACAGATGACGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASHTSSHEVGSEATLRGRDIADG*HTDDED Trigger: ATCCTCGTCATCTGTGTGCCAACCATCCGCGATATC...CCTTCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAAGGTTCATCTTTGGTTCCTaGATTTCCATCCCCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASHTSSHEVGSEATLRGRFIFGS*ISIPTA Trigger: CGCTGTGGGGATGGAAATGCAGGAACCAAAGATGAA...CCTTCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033512.11 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGAGGATGACTCCAGTGTGTaGCATGGCATAAGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRTQESDLDSLVYTREDDSSV*HGISQS Trigger: GGACTGGCTTATGCCATGGCACACACTGGAGTCATC...CTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACTCCGATGGACATGTTaGCCACAGCTTGCATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCPRQEGLRKVTWIPSYTLRWTC*PQLASC Trigger: GCAGGATGCAAGCTGTGGCCAACATGTCCATCGGAG...TGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACAGTGCTGTAGAAGGTaGGGTATCCAAAGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCPRQEGLRKVTWIPSYTQCCRR*GIQRSL Trigger: CAGCGACCTTTGGATACCTCACCTTCTACAGCACTG...TGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | GAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCTCTCCAGTGCTGTAGAAGGTaGGGTATCCAAAGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELCGLRTLLRTWPPIPPLQCCRR*GIQRSL Trigger: CAGCGACCTTTGGATACCTCACCTTCTACAGCACTG...GAGAGGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGAGATAGCCCCAACGTTGTaGAGACAGATGATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGRTQESDLDSLVYTREIAPTL*RQMMMA Trigger: GGCCATCATCATCTGTCTGCACAACGTTGGGGCTAT...CTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCAAAGGCAATGGCCACATaGCGTAGCCAGCTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSTVPISHSNVIRDQTPPKAMAT*RSQLKA Trigger: GGCCTTCAGCTGGCTACGCCATGTGGCCATTGCCTT...TGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTCAAGGCAATGGCCACATaGCGTAGCCAGCTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLSPFPTAMLLETRHLHVKAMAT*RSQLKA Trigger: GGCCTTCAGCTGGCTACGCCATGTGGCCATTGCCTT...GACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCAAGACAGGAGAGCAATaGACAGCAGCAGGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VRTMWAKNSSKDLASHTSKTGEQ*TAAGPK Trigger: TTTTGGCCCTGCTGCTGTGCATTGCTCTCCTGTCTT...GGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCATAGCCCCAACGTTGTaGAGACAGATGATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: VRTMWAKNSSKDLASHTSIAPTL*RQMMMA Trigger: GGCCATCATCATCTGTCTGCACAACGTTGGGGCTAT...GGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCTCTCCTGCTGTTAAACGCCTaGAAAGGAGCTTGTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ELCGLRTLLRTWPPIPPLLLLNA*KGACSA Trigger: GGCTGAACAAGCTCCTTTGCAGGCGTTTAACAGCAG...GAGAGGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | GTGAGAACTATGTGGGCTAAGAACTCTTCTAAGGACCTGGCCTCCCATACCTCCCTGCTGTTAAACGCCTaGAAAGGAGCTTGTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VRTMWAKNSSKDLASHTSLLLNA*KGACSA Trigger: GGCTGAACAAGCTCCTTTGCAGGCGTTTAACAGCAG...GGAGGTATGGGAGGCCAGGTCCTTAGAAGAGTTCTTAGCCCACATAGTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCAGGATGCCTACAACACTaGCACAGGTCAGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVPISHSNVIRDQTPPGCLQH*HRSAGG Trigger: ACCTCCTGCTGACCTGTGCCAGTGTTGTAGGCATCC...TGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTCCTCCGATGGACATGTTaGCCACAGCTTGCATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QLSPFPTAMLLETRHLHVLRWTC*PQLASC Trigger: GCAGGATGCAAGCTGTGGCCAACATGTCCATCGGAG...GACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | CAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTCGATGACTCCAGTGTGTaGCATGGCATAAGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QLSPFPTAMLLETRHLHVDDSSV*HGISQS Trigger: GGACTGGCTTATGCCATGGCACACACTGGAGTCATC...GACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGAGACTACTGTGTCATTGTaGCTCACATCACAGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: QAGRTQESDLDSLVYTRETTVSL*LTSQPI Trigger: GATTGGCTGTGATGTGAGCCACAATGACACAGTAGT...CTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | TCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTGCAGAATCAAGGCAATaGCCACATGGCGTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: STVPISHSNVIRDQTPPCAESRQ*PHGVAS Trigger: GCTGGCTACGCCATGTGGCCATTGCCTTGATTCTGC...ACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | TCCTCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCACTGCTGTTAAACGCCTaGAAAGGAGCTTGTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSTVPISHSNVIRDQTPPLLLNA*KGACSA Trigger: GGCTGAACAAGCTCCTTTGCAGGCGTTTAACAGCAG...TGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCAGGATGCCTACAACACTaGCACAGGTCAGCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: HSASLFFPFSARVTLTASGCLQH*HRSAGG Trigger: ACCTCCTGCTGACCTGTGCCAGTGTTGTAGGCATCC...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCAGATATCGCGGATGGTTaGCACACAGATGACGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SSTVPISHSNVIRDQTPPDIADG*HTDDED Trigger: ATCCTCGTCATCTGTGTGCCAACCATCCGCGATATC...TGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR TCA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCAGCACAACAGGCACAGTaGGGGTTACTGCAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: HSASLFFPFSARVTLTASAQQAQ*GLLQAV Trigger: TACTGCTTGCAGTAACCCTCACTGTGCCTGTTGTGC...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | TCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTATAGCCCCAACGTTGTaGAGACAGATGATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STVPISHSNVIRDQTPPCIAPTL*RQMMMA Trigger: GGCCATCATCATCTGTCTGCACAACGTTGGGGCTAT...ACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCACCCTCAGGGTCCATGTaGAGGAAGGTGCCAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSASLFFPFSARVTLTASPSGSM*RKVPIT Trigger: TGTTATTGGCACCTTCCTGCACATGGACCCTGAGGG...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR GCA 90 bp | TTTCATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTCCCTCAGGGTCCATGTaGAGGAAGGTGCCAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: FHSASLFFPFSARVTLTAPSGSM*RKVPIT Trigger: TGTTATTGGCACCTTCCTGCACATGGACCCTGAGGG...AGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033512.11 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | TTTCATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTGATATCGCGGATGGTTaGCACACAGATGACGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHSASLFFPFSARVTLTADIADG*HTDDED Trigger: ATCCTCGTCATCTGTGTGCCAACCATCCGCGATATC...AGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033512.11 ENSMUST00000115591.8 |
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| CDS-3UTR CCA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCAACTACTGTGTCATTGTaGCTCACATCACAGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: HSASLFFPFSARVTLTASTTVSL*LTSQPI Trigger: GATTGGCTGTGATGTGAGCCACAATGACACAGTAGT...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGATGGCCTGTGGCCCAGTaGGCAAACATGAAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LASHTSSHEVGSEATLRGWPVAQ*ANMKPR Trigger: CCTGGGCTTCATGTTTGCCAACTGGGCCACAGGCCA...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGAGCATGTTGGCCACAGCTaGCATCCTGCGCTGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: QAGRTQESDLDSLVYTREHVGHS*HPALGG Trigger: CCCACCCAGCGCAGGATGCAAGCTGTGGCCAACATG...CTCACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACGCGTGTGGCCTGTGGCCCAGTaGGCAAACATGAAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PRQEGLRKVTWIPSYTRVWPVAQ*ANMKPR Trigger: CCTGGGCTTCATGTTTGCCAACTGGGCCACAGGCCA...CACGCGTGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACACATGTTGGCCACAGCTaGCATCCTGCGCTGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: PCPRQEGLRKVTWIPSYTHVGHS*HPALGG Trigger: CCCACCCAGCGCAGGATGCAAGCTGTGGCCAACATG...TGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGACACAGGGCCTGGATCTaGGGCCAGGAAAACAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LASHTSSHEVGSEATLRGHRAWI*GQENKG Trigger: ACCTTTGTTTTCCTGGCCCAAGATCCAGGCCCTGTG...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS GCA 90 bp | GAGTCAACGGTGAAGAGCTCGGCCTCGCAGCTGCTGTTAAACGCCTaGAAAGGAGCTTGTTCAGCCTCCACTACTGTGTCATTGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ESTVKSSASQLLLNA*KGACSASTTVSLWL Trigger: GAGCCACAATGACACAGTAGTGGAGGCTGAACAAGCTCCTTTGCAGGCGTTTAACAGCAGCTGCGAGGCCGAGCTCTTCACCGTTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS GCA 90 bp | GGCTCGGCGGATAGGGAAAAGCACAACAGGCACAGTGAGGGTTACTaGAAGCAGTACGGCCAGACGCACACAAAGGATAAGCATGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GSADREKHNRHSEGY*KQYGQTHTKDKHVL Trigger: GAGGACATGCTTATCCTTTGTGTGCGTCTGGCCGTACTGCTTGCAGTAACCCTCACTGTGCCTGTTGTGCTTTTCCCTATCCGCCGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCTCCCATACCTCCTCTCATGAGGTTGGCAGTGAGGCAACTCTAAGGGGAGACATAGCCCCAACGTaGTGCAGACAGATGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LASHTSSHEVGSEATLRGDIAPT*CRQMMM Trigger: CATCATCATCTGTCTGCACAACGTTGGGGCTATGTC...TCCCCTTAGAGTTGCCTCACTGCCAACCTCATGAGAGGAGGTATGGGAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | TCCTCAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCACATGTTGGCCACAGCTaGCATCCTGCGCTGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SSTVPISHSNVIRDQTPPHVGHS*HPALGG Trigger: CCCACCCAGCGCAGGATGCAAGCTGTGGCCAACATG...TGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACAGACATAGCCCCAACGTaGTGCAGACAGATGATGATG | + |
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Preference number: 5 (lower is better) Translates to: PCPRQEGLRKVTWIPSYTDIAPT*CRQMMM Trigger: CATCATCATCTGTCTGCACAACGTTGGGGCTATGTC...TGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CCATGTCCCAGGCAGGAAGGACTCAGGAAAGTGACTTGGATTCCCTCGTATACAGGGTTCCATTCATCTTaGGTTCCTGCATTTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: PCPRQEGLRKVTWIPSYTGFHSS*VPAFPS Trigger: GGATGGAAATGCAGGAACCAAAGATGAATGGAACCC...TGTATACGAGGGAATCCAAGTCACTTTCCTGAGTCCTTCCTGCCTGGGACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033512.11 |
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| CDS-3UTR CAA 90 bp | CAACTGTCCCCATTTCCCACAGCAATGTTATTAGAGACCAGACACCTCCATGTCGACATAGCCCCAACGTaGTGCAGACAGATGATGATG | + |
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Preference number: 5 (lower is better) Translates to: QLSPFPTAMLLETRHLHVDIAPT*CRQMMM Trigger: CATCATCATCTGTCTGCACAACGTTGGGGCTATGTC...GACATGGAGGTGTCTGGTCTCTAATAACATTGCTGTGGGAAATGGGGACAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCACACAGGGCCTGGATCTaGGGCCAGGAAAACAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: HSASLFFPFSARVTLTASHRAWI*GQENKG Trigger: ACCTTTGTTTTCCTGGCCCAAGATCCAGGCCCTGTG...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS-3UTR CAA 90 bp | CATTCAGCATCTTTATTCTTCCCTTTTAGCGCCAGGGTAACCCTAACAGCTTCATCCACTACTGTGTCATaGTGGCTCACATCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: HSASLFFPFSARVTLTASSTTVS*WLTSQP Trigger: TGGCTGTGATGTGAGCCACAATGACACAGTAGTGGA...TGAAGCTGTTAGGGTTACCCTGGCGCTAAAAGGGAAGAATAAAGATGCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS TCA 72 bp | GCAGAATCAAGGCAATGGCCACATGGCGTAGCCAGCTaGAGGCCTTGCTTGGAAAGAGCAGCTGCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: AESRQWPHGVAS*RPCLERAAAGG Trigger: CCCTCCAGCAGCTGCTCTTTCCAAGCAAGGCCTTCAGCTGGCTACGCCATGTGGCCATTGCCTTGATTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CAA 72 bp | AGTCCATACATGATGAACATAGCTCCGATGGACATGTaGGCCACAGCTTGCATCCTGCGCTGGGTGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SPYMMNIAPMDM*ATACILRWVGR Trigger: CCGCCCCACCCAGCGCAGGATGCAAGCTGTGGCCAACATGTCCATCGGAGCTATGTTCATCATGTATGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CAA 90 bp | GTCGCTGTGAGTCCATACATGATGAACATAGCTCCGATGGACATGTaGGCCACAGCTTGCATCCTGCGCTGGGTGGGGCGGCAAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VAVSPYMMNIAPMDM*ATACILRWVGRQSS Trigger: AGAACTTTGCCGCCCCACCCAGCGCAGGATGCAAGCTGTGGCCAACATGTCCATCGGAGCTATGTTCATCATGTATGGACTCACAGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CAA 72 bp | GGCCTCGCAGCTGCTGTTAAACGCCTGCAAAGGAGCTaGTTCAGCCTCCACTACTGTGTCATTGTGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GLAAAVKRLQRS*FSLHYCVIVAH Trigger: GTGAGCCACAATGACACAGTAGTGGAGGCTGAACAAGCTCCTTTGCAGGCGTTTAACAGCAGCTGCGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CAA 90 bp | GCCATGAAGAGGACTCCCAGGACACCAAAGCACAGGGCCTGGATCTaGGGCCAGGAAAACAAAGGTTCCACCTCAGTAGGTACAATACGG | + |
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Preference number: 6 (lower is better) Translates to: AMKRTPRTPKHRAWI*GQENKGSTSVGTIR Trigger: CCGTATTGTACCTACTGAGGTGGAACCTTTGTTTTCCTGGCCCAAGATCCAGGCCCTGTGCTTTGGTGTCCTGGGAGTCCTCTTCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CCA 72 bp | ACGGCCAGACGCACACAAAGGATAAGCATGTCCTCCTaGGTGTACATTTCCAGCATCTCTGCCTTCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: TARRTQRISMSS*VYISSISAFTV Trigger: CACTGTGAAGGCAGAGATGCTGGAAATGTACACCCAGGAGGACATGCTTATCCTTTGTGTGCGTCTGGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS GCA 72 bp | GATAGGGAAAAGCACAACAGGCACAGTGAGGGTTACTaGAAGCAGTACGGCCAGACGCACACAAAGGATAAG | + |
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Preference number: 6 (lower is better) Translates to: DREKHNRHSEGY*KQYGQTHTKDK Trigger: CTTATCCTTTGTGTGCGTCTGGCCGTACTGCTTGCAGTAACCCTCACTGTGCCTGTTGTGCTTTTCCCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CCA 72 bp | ATTCCGAATGATGTCTTCCCCTCGAAATCCAAGAACTaGACAGGTTTCCTCCCAGTAGCAGGGTTACGGGTG | + |
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Preference number: 6 (lower is better) Translates to: IPNDVFPSKSKN*TGFLPVAGLRV Trigger: CACCCGTAACCCTGCTACTGGGAGGAAACCTGTCCAGTTCTTGGATTTCGAGGGGAAGACATCATTCGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 ENSMUST00000127103.8 |
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| CDS CAA 72 bp | TGCAAAGGAGCTTGTTCAGCCTCCACTACTGTGTCATaGTGGCTCACATCACAGCCAATCTGGAACTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: CKGACSASTTVS*WLTSQPIWNFL Trigger: TAAGAAGTTCCAGATTGGCTGTGATGTGAGCCACAATGACACAGTAGTGGAGGCTGAACAAGCTCCTTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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| CDS CAA 72 bp | ATATCGCGGATGGTTGGCACACAGATGACGAGGATATaGACCAGAATAAGCAGAATCAAGGCAATGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISRMVGTQMTRI*TRISRIKAMAT Trigger: TGTGGCCATTGCCTTGATTCTGCTTATTCTGGTCAATATCCTCGTCATCTGTGTGCCAACCATCCGCGATAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033512.11 ENSMUST00000115590.2 ENSMUST00000115591.8 |
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