Pregenerated sensors for SLC38A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022464Ensembl transcript IDs: ENSMUST00000023101.10, ENSMUST00000166223.2, ENSMUST00000230086.2, ENSMUST00000230907.2, ENSMUST00000231039.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGTGGGCGGAGTCTGAACTCCATCCCGTGTAAGCGTCCATGGATGTaGGCAATGTGGTTTTGGGTCATGTTGGTGCATTTATTCCTAACC | + |
Preference number: 1 (lower is better) Translates to: SGRSLNSIPCKRPWM*AMWFWVMLVHLFLT Trigger: GGTTAGGAATAAATGCACCAACATGACCCAAAACCACATTGCTCACATCCATGGACGCTTACACGGGATGGAGTTCAGACTCCGCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR GCA 90 bp | CTTGCACAGCTGCTGCAAACACAACTCGGGCATCACACACTGCACTaGACGGCCTGGGTTAAAATGTGTGCCACAGAATTTTTAATGCAT | + |
Preference number: 1 (lower is better) Translates to: LAQLLQTQLGHHTLH*TAWVKMCATEFLMH Trigger: ATGCATTAAAAATTCTGTGGCACACATTTTAACCCAGGCCGTGCAGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CCA 90 bp | CTGCTGCAAACACAACTCGGGCATCACACACTGCACTGCACGGCCTaGGTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCA | + |
Preference number: 1 (lower is better) Translates to: LLQTQLGHHTLHCTA*VKMCATEFLMHPSP Trigger: TGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAACCCAGGCCGTGCAGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR TCA 90 bp | AGTGTGTCTCCACACGGACTGTGGTCTTCTGAAAATTACGAAGAGTaGGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAAGACAAAGTG | + |
Preference number: 1 (lower is better) Translates to: SVSPHGLWSSENYEE*ERKTRGEALFKDKV Trigger: CACTTTGTCTTTGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACAGTCCGTGTGGAGACACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CCA 90 bp | ACTGAACTATGCACAACTTTGACTTTAATTTTTAGATGTCTCCAATaGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATT | + |
Preference number: 1 (lower is better) Translates to: TELCTTLTLIFRCLQ*TDKYPWIFEPTSLI Trigger: AATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAGACATCTAAAAATTAAAGTCAAAGTTGTGCATAGTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CAA 90 bp | AGGCTATTGTCTGCTGACCAACACACGCAGCCAACAGGCTTCAGCTaGCACAGCTGCTGCAAACACAACTCGGGCATCACACACTGCACT | + |
Preference number: 2 (lower is better) Translates to: RLLSADQHTQPTGFS*HSCCKHNSGITHCT Trigger: AGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGCTGCGTGTGTTGGTCAGCAGACAATAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR GCA 90 bp | GATGTTCTGAGAGTAGAATTACCTGTTAATCTGGGGGTGGAGAGAAGTGGAGTGTTCAGCTTGCACAGCTaGTGCAAACACAACTCGGGC | + |
Preference number: 2 (lower is better) Translates to: DVLRVELPVNLGVERSGVFSLHS*CKHNSG Trigger: GCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAA...CACTCCACTTCTCTCCACCCCCAGATTAACAGGTAATTCTACTCTCAGAACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR GCA 90 bp | CTGTTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGTTCAGCTTGCACAGCTaGTGCAAACACAACTCGGGC | + |
Preference number: 2 (lower is better) Translates to: LLKNCFGVTVLSLPVGYLFSLHS*CKHNSG Trigger: GCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAA...CAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CCA 90 bp | CTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAATTACCTGTTAATCTaGGGGTGGAGAGAAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: LLKITKSENGRREGKPCSNYLLI*GWREVE Trigger: CTCCACTTCTCTCCACCCCCAGATTAACAGGTAATT...TGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CCA 90 bp | CTCCAATGGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATTCCCAATTACCTGTTAATCTaGGGGTGGAGAGAAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: LQWTDKYPWIFEPTSLIPNYLLI*GWREVE Trigger: CTCCACTTCTCTCCACCCCCAGATTAACAGGTAATT...GGGAATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CCA 90 bp | AGTACTCTATACTGGCAACCGTCATTCATGATCCTCACAGGGACAGCTCCCAAGCTAGAAAAACGTCTTTaGAATCTTGCTAATTCCTCA | + |
Preference number: 2 (lower is better) Translates to: STLYWQPSFMILTGTAPKLEKRL*NLANSS Trigger: TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAG...CTTGGGAGCTGTCCCTGTGAGGATCATGAATGACGGTTGCCAGTATAGAGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CCA 90 bp | AGAGTGAGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAAGACAAAGTGGAACACTAGAAAAACGTCTTTaGAATCTTGCTAATTCCTCA | + |
Preference number: 2 (lower is better) Translates to: RVRTEDERGSLVQRQSGTLEKRL*NLANSS Trigger: TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAG...TGTTCCACTTTGTCTTTGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCCTAGAAAAACGTCTTTaGAATCTTGCTAATTCCTCA | + |
Preference number: 2 (lower is better) Translates to: VCHRIFNASFTIPNKTIPLEKRL*NLANSS Trigger: TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAG...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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3UTR-3UTR GCA 90 bp | TTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGCATCAACGTTCTGATAACTaGAGAATGAGATTATGTACA | + |
Preference number: 2 (lower is better) Translates to: LKNCFGVTVLSLPVGYLHQRSDN*RMRLCT Trigger: TGTACATAATCTCATTCTGCAGTTATCAGAACGTTG...ATGCAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR GCA 72 bp | CACACGCAGCCAACAGGCTTCAGCTTGCACAGCTGCTaGAAACACAACTCGGGCATCACACACTGCACTGCA | + |
Preference number: 3 (lower is better) Translates to: HTQPTGFSLHSC*KHNSGITHCTA Trigger: TGCAGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGCTGCGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR GCA 72 bp | CAACACACGCAGCCAACAGGCTTCAGCTTGCACAGCTaGTGCAAACACAACTCGGGCATCACACACTGCACT | + |
Preference number: 3 (lower is better) Translates to: QHTQPTGFSLHS*CKHNSGITHCT Trigger: AGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGCTGCGTGTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR GCA 72 bp | CTGCTGCAAACACAACTCGGGCATCACACACTGCACTaGACGGCCTGGGTTAAAATGTGTGCCACAGAATTT | + |
Preference number: 3 (lower is better) Translates to: LLQTQLGHHTLH*TAWVKMCATEF Trigger: AAATTCTGTGGCACACATTTTAACCCAGGCCGTGCAGTGCAGTGTGTGATGCCCGAGTTGTGTTTGCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CAA 90 bp | GCCAACAGGCTTCAGCTTGCACAGCTGCTGCAAACACAACTCGGGCATCACACAAACGTCTTTGGAATCTaGCTAATTCCTCAGACTAAC | + |
Preference number: 3 (lower is better) Translates to: ANRLQLAQLLQTQLGHHTNVFGI*LIPQTN Trigger: GTTAGTCTGAGGAATTAGCAAGATTCCAAAGACGTT...TGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CAA 90 bp | CATGATCCTCACAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACAACGTCTTTGGAATCTaGCTAATTCCTCAGACTAAC | + |
Preference number: 3 (lower is better) Translates to: HDPHRDSSQDIPLPQLVNNVFGI*LIPQTN Trigger: GTTAGTCTGAGGAATTAGCAAGATTCCAAAGACGTT...GTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTGTGAGGATCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CAA 90 bp | AGTACTCTATACTGGCAACCGTCATTCATGATCCTCACAGGGACAGCTCCCAAGCCAACCAGGAGGTCTTaGTCTGATGTTCTGAGAGTA | + |
Preference number: 3 (lower is better) Translates to: STLYWQPSFMILTGTAPKPTRRS*SDVLRV Trigger: TACTCTCAGAACATCAGACAAAGACCTCCTGGTTGG...CTTGGGAGCTGTCCCTGTGAGGATCATGAATGACGGTTGCCAGTATAGAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR TCA 72 bp | CCACACGGACTGTGGTCTTCTGAAAATTACGAAGAGTaGGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAA | + |
Preference number: 3 (lower is better) Translates to: PHGLWSSENYEE*ERKTRGEALFK Trigger: TTTGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACAGTCCGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR TCA 72 bp | AGTCTGAACTCCATCCCGTGTAAGCGTCCATGGATGTaGGCAATGTGGTTTTGGGTCATGTTGGTGCATTTA | + |
Preference number: 3 (lower is better) Translates to: SLNSIPCKRPWM*AMWFWVMLVHL Trigger: TAAATGCACCAACATGACCCAAAACCACATTGCTCACATCCATGGACGCTTACACGGGATGGAGTTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CCA 72 bp | ACACAACTCGGGCATCACACACTGCACTGCACGGCCTaGGTTAAAATGTGTGCCACAGAATTTTTAATGCAT | + |
Preference number: 3 (lower is better) Translates to: TQLGHHTLHCTA*VKMCATEFLMH Trigger: ATGCATTAAAAATTCTGTGGCACACATTTTAACCCAGGCCGTGCAGTGCAGTGTGTGATGCCCGAGTTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CAA 90 bp | TTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGCATGTGAGCAATGTGGTTTaGGGTCATGTTGGTGCATTT | + |
Preference number: 3 (lower is better) Translates to: LKNCFGVTVLSLPVGYLHVSNVV*GHVGAF Trigger: AAATGCACCAACATGACCCAAAACCACATTGCTCAC...ATGCAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR-3UTR CAA 90 bp | ATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCAACGTCTTTGGAATCTaGCTAATTCCTCAGACTAAC | + |
Preference number: 3 (lower is better) Translates to: MCATEFLMHPSPFPTKPFNVFGI*LIPQTN Trigger: GTTAGTCTGAGGAATTAGCAAGATTCCAAAGACGTT...GAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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3UTR TCA 72 bp | GTAATAAGCAGGTTGGGCAAACTATTCCTTGAGTATTaGAATGAAGTACTCTATACTGGCAACCGTCATTCA | + |
Preference number: 3 (lower is better) Translates to: VISRLGKLFLEY*NEVLYTGNRHS Trigger: TGAATGACGGTTGCCAGTATAGAGTACTTCATTTCAATACTCAAGGAATAGTTTGCCCAACCTGCTTATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CCA 72 bp | TGCACAACTTTGACTTTAATTTTTAGATGTCTCCAATaGACAGATAAGTACCCATGGATTTTTGAGCCCACC | + |
Preference number: 3 (lower is better) Translates to: CTTLTLIFRCLQ*TDKYPWIFEPT Trigger: GGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAGACATCTAAAAATTAAAGTCAAAGTTGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR TCA 72 bp | GAAAATTATTTACAAACCCTTCCTTCGCTACTTTGCTaGGATGATTATAGTCTTGTAAACAGTGAAGAGCAT | + |
Preference number: 3 (lower is better) Translates to: ENYLQTLPSLLC*DDYSLVNSEEH Trigger: ATGCTCTTCACTGTTTACAAGACTATAATCATCTCAGCAAAGTAGCGAAGGAAGGGTTTGTAAATAATTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GCCAACAGGCTTCAGCTTGCACAGCTGCTGCAAACACAACTCGGGCATCACACACACTGCCACCAGGACTaGCAGGCGCACCATGAGAAG | + |
Preference number: 4 (lower is better) Translates to: ANRLQLAQLLQTQLGHHTHCHQD*QAHHEK Trigger: CTTCTCATGGTGCGCCTGGCAGTCCTGGTGGCAGTG...TGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CATGATCCTCACAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACCACTGCCACCAGGACTaGCAGGCGCACCATGAGAAG | + |
Preference number: 4 (lower is better) Translates to: HDPHRDSSQDIPLPQLVNHCHQD*QAHHEK Trigger: CTTCTCATGGTGCGCCTGGCAGTCCTGGTGGCAGTG...GTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTGTGAGGATCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CATGATCCTCACAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACGAGAGAGCGGGAGGATaGTCCCCACGGACACAAATA | + |
Preference number: 4 (lower is better) Translates to: HDPHRDSSQDIPLPQLVNERAGG*SPRTQI Trigger: TATTTGTGTCCGTGGGGATCATCCTCCCGCTCTCTC...GTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTGTGAGGATCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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3UTR CAA 72 bp | TCTGCTGACCAACACACGCAGCCAACAGGCTTCAGCTaGCACAGCTGCTGCAAACACAACTCGGGCATCACA | + |
Preference number: 4 (lower is better) Translates to: SADQHTQPTGFS*HSCCKHNSGIT Trigger: TGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGCTGCGTGTGTTGGTCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGGGCGAGGTAGTTGCCGTTaGGGTACCATTCCCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: KMSFRQFQLFPVETRLPGRGSCR*GTIPQC Trigger: ACACTGGGGAATGGTACCTCAACGGCAACTACCTCG...CCCGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CCAGAGATTCTAGGCAGTGGGCGGAGTCTGAACTCCATCCCGTGTAAGCGTCCATGTAAATCACCACACTaGCGAAAAACACCATGCAGG | + |
Preference number: 4 (lower is better) Translates to: PEILGSGRSLNSIPCKRPCKSPH*RKTPCR Trigger: CCTGCATGGTGTTTTTCGTCAGTGTGGTGATTTACA...TGGACGCTTACACGGGATGGAGTTCAGACTCCGCCCACTGCCTAGAATCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CCAGAGATTCTAGGCAGTGGGCGGAGTCTGAACTCCATCCCGTGTAAGCGTCCAGTAGAGCGAGAGTATTaGCACAGTAAGCAGCATGAT | + |
Preference number: 4 (lower is better) Translates to: PEILGSGRSLNSIPCKRPVEREY*HSKQHD Trigger: ATCATGCTGCTTACTGTGGCAATACTCTCGCTCTAC...TGGACGCTTACACGGGATGGAGTTCAGACTCCGCCCACTGCCTAGAATCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GCCAACAGGCTTCAGCTTGCACAGCTGCTGCAAACACAACTCGGGCATCACACACCCAGGCCATCCAAATaGTTTCTCGCCCAATTTTTC | + |
Preference number: 4 (lower is better) Translates to: ANRLQLAQLLQTQLGHHTPRPSK*FLAQFF Trigger: GAAAAATTGGGCGAGAAAGCATTTGGATGGCCTGGG...TGTGTGATGCCCGAGTTGTGTTTGCAGCAGCTGTGCAAGCTGAAGCCTGTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAGAGGGCCTGCGACCTaGTTCTCATCCAGCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LLKITKSENGRREGKPCSRGPAT*FSSSPA Trigger: AGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCT...TGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGGGTCCCGGTGTTGGCCATaGCATAGGACAAGCCTAAGA | + |
Preference number: 4 (lower is better) Translates to: KMSFRQFQLFPVETRLPGSRCWP*HRTSLR Trigger: TCTTAGGCTTGTCCTATGCCATGGCCAACACCGGGA...CCCGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACCGACCCTTAGTAGAGGTAGCTTGACATaGCTCCAATGTTCTGCATTG | + |
Preference number: 4 (lower is better) Translates to: QGQLPRYPPASASQPTLSRGSLT*LQCSAL Trigger: CAATGCAGAACATTGGAGCCATGTCAAGCTACCTCT...ACTAAGGGTCGGTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGCTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATC | + |
Preference number: 4 (lower is better) Translates to: LKCPSDNFSCFQWRRVSPLIQPS*VVVSVI Trigger: GATTACGCTCACCACAACCCAGCTGGGCTGGATGAG...CGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGGGAGCAAAAGCCAGGATTaGGATTGCATAGGCCGTCCG | + |
Preference number: 4 (lower is better) Translates to: KMSFRQFQLFPVETRLPGSKSQD*DCIGRP Trigger: CGGACGGCCTATGCAATCCCAATCCTGGCTTTTGCT...CCCGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AGTACTCTATACTGGCAACCGTCATTCATGATCCTCACAGGGACAGCTCCCAAGAGATTTCCGTTGTTGTaGTCCAGAGCAGGCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: STLYWQPSFMILTGTAPKRFPLL*SRAGRG Trigger: CCCTCTGCCTGCTCTGGATCACAACAACGGAAATCT...CTTGGGAGCTGTCCCTGTGAGGATCATGAATGACGGTTGCCAGTATAGAGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ACAACTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCAGAGGGCCTGCGACCTaGTTCTCATCCAGCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: TTKMSFRQFQLFPVETRLRGPAT*FSSSPA Trigger: AGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCT...GAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGAGCCAGGATTGGGATTaGATAGGCCGTCCGGGAATT | + |
Preference number: 4 (lower is better) Translates to: LKCPSDNFSCFQWRRVSPSQDWD*IGRPGI Trigger: AATTCCCGGACGGCCTATGCAATCCCAATCCTGGCT...CGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ACGGACTGTGGTCTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGAGCAAAAGCCAGGATTaGGATTGCATAGGCCGTCCG | + |
Preference number: 4 (lower is better) Translates to: TDCGLLKITKSENGRREGSKSQD*DCIGRP Trigger: CGGACGGCCTATGCAATCCCAATCCTGGCTTTTGCT...CCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACAGTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTCCAATGGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATTCCCTCGGGAACAGCACGATaGGCACGGTCAGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: LQWTDKYPWIFEPTSLIPSGTAR*ARSVSL Trigger: CAGTGACACTGACCGTGCCCATCGTGCTGTTCCCGA...GGGAATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CATGATCCTCACAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACAAAGCCCCAATCTTCTaGGGTGATCTTAGAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: HDPHRDSSQDIPLPQLVNKAPIF*GDLRGS Trigger: AGAACCTCTAAGATCACCCCAGAAGATTGGGGCTTT...GTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTGTGAGGATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CCAGAGATTCTAGGCAGTGGGCGGAGTCTGAACTCCATCCCGTGTAAGCGTCCATTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTA | + |
Preference number: 4 (lower is better) Translates to: PEILGSGRSLNSIPCKRPFVRNF*LSASSL Trigger: TAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAA...TGGACGCTTACACGGGATGGAGTTCAGACTCCGCCCACTGCCTAGAATCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GATGTTCTGAGAGTAGAATTACCTGTTAATCTGGGGGTGGAGAGAAGTGGAGTGGAGAGAGCGGGAGGATaGTCCCCACGGACACAAATA | + |
Preference number: 4 (lower is better) Translates to: DVLRVELPVNLGVERSGVERAGG*SPRTQI Trigger: TATTTGTGTCCGTGGGGATCATCCTCCCGCTCTCTC...CACTCCACTTCTCTCCACCCCCAGATTAACAGGTAATTCTACTCTCAGAACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ATAGAGATGTATCAAACAATACTGGGTAGTGTGTCTCCACACGGACTGTGGTCTGCTGTGAAGAGGGCCTaGGACCTGCTTCTCATCCAG | + |
Preference number: 4 (lower is better) Translates to: IEMYQTILGSVSPHGLWSAVKRA*DLLLIQ Trigger: CTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGC...AGACCACAGTCCGTGTGGAGACACACTACCCAGTATTGTTTGATACATCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCCACTGCCACCAGGACTaGCAGGCGCACCATGAGAAG | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPHCHQD*QAHHEK Trigger: CTTCTCATGGTGCGCCTGGCAGTCCTGGTGGCAGTG...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTCCAATGGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATTCCCCATTTCTCAGCACCCTaGGCTTCGTACTCCACGCCA | + |
Preference number: 4 (lower is better) Translates to: LQWTDKYPWIFEPTSLIPHFSAP*ASYSTP Trigger: TGGCGTGGAGTACGAAGCCCAGGGTGCTGAGAAATG...GGGAATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CATGATCCTCACAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACTTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTA | + |
Preference number: 4 (lower is better) Translates to: HDPHRDSSQDIPLPQLVNFVRNF*LSASSL Trigger: TAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAA...GTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTGTGAGGATCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CAGGGACAGCTCCCAAGATATCCCCCTGCCTCAGCTAGTCAACCGACCCTTAGTATGGCTCCAATGTTCTaGATTGTAATAGAGATGAAG | + |
Preference number: 4 (lower is better) Translates to: QGQLPRYPPASASQPTLSMAPMF*IVIEMK Trigger: CTTCATCTCTATTACAATGCAGAACATTGGAGCCAT...ACTAAGGGTCGGTTGACTAGCTGAGGCAGGGGGATATCTTGGGAGCTGTCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ATAGAGATGTATCAAACAATACTGGGTAGTGTGTCTCCACACGGACTGTGGTCTCTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATC | + |
Preference number: 4 (lower is better) Translates to: IEMYQTILGSVSPHGLWSLIQPS*VVVSVI Trigger: GATTACGCTCACCACAACCCAGCTGGGCTGGATGAG...AGACCACAGTCCGTGTGGAGACACACTACCCAGTATTGTTTGATACATCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TCGGGCATCACACACTGCACTGCACGGCCTGGGTTAAAATGTGTGCCACAGAATACAAAGTATTTTGGTTaGCATTTCTCAGCACCCTGG | + |
Preference number: 4 (lower is better) Translates to: SGITHCTARPGLKCVPQNTKYFG*HFSAPW Trigger: CCAGGGTGCTGAGAAATGCCAACCAAAATACTTTGT...ATTCTGTGGCACACATTTTAACCCAGGCCGTGCAGTGCAGTGTGTGATGCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGGGCTGAGATGGAAATGTTaGACACCGTCTGCATCTTTC | + |
Preference number: 4 (lower is better) Translates to: KMSFRQFQLFPVETRLPGLRWKC*TPSASF Trigger: GAAAGATGCAGACGGTGTCCAACATTTCCATCTCAG...CCCGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ACGGACTGTGGTCTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCAC | + |
Preference number: 4 (lower is better) Translates to: TDCGLLKITKSENGRREGAEGFP*KQQCDH Trigger: GTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGC...CCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACAGTCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | TGTGGTCTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGAAGCCTGATGAAGAGGTAGCTTaGCATGGCTCCAATGTTCTG | + |
Preference number: 4 (lower is better) Translates to: CGLLKITKSENGRREGKPDEEVA*HGSNVL Trigger: CAGAACATTGGAGCCATGTCAAGCTACCTCTTCATC...AGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCCGAGGTAGTTGCCGTTaGGGTACCATTCCCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPRGSCR*GTIPQC Trigger: ACACTGGGGAATGGTACCTCAACGGCAACTACCTCG...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AGTACTCTATACTGGCAACCGTCATTCATGATCCTCACAGGGACAGCTCCCAAGTGTAAATCACCACACTaGCGAAAAACACCATGCAGG | + |
Preference number: 4 (lower is better) Translates to: STLYWQPSFMILTGTAPKCKSPH*RKTPCR Trigger: CCTGCATGGTGTTTTTCGTCAGTGTGGTGATTTACA...CTTGGGAGCTGTCCCTGTGAGGATCATGAATGACGGTTGCCAGTATAGAGTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ACCATTCCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGAGAGGGCCTGCGACCTaGTTCTCATCCAGCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: TIPNKTHNFLFHKYPMIERGPAT*FSSSPA Trigger: AGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCT...CTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGGAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCATCGGGAACAGCACGATaGGCACGGTCAGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: CATEFLMHPSPFPTKPFPSGTAR*ARSVSL Trigger: CAGTGACACTGACCGTGCCCATCGTGCTGTTCCCGA...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GATGTTCTGAGAGTAGAATTACCTGTTAATCTGGGGGTGGAGAGAAGTGGAGTGAATGCTTCAGCCAGCTaGAGGGTTTCCTTGGAAACA | + |
Preference number: 4 (lower is better) Translates to: DVLRVELPVNLGVERSGVNASAS*RVSLET Trigger: TGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATT...CACTCCACTTCTCTCCACCCCCAGATTAACAGGTAATTCTACTCTCAGAACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAGCTGTGAAGAGGGCCTaGGACCTGCTTCTCATCCAG | + |
Preference number: 4 (lower is better) Translates to: PNKTHNFLFHKYPMIELEAVKRA*DLLLIQ Trigger: CTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGC...TTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTGTTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGCATTTCTCAGCACCCTaGGCTTCGTACTCCACGCCA | + |
Preference number: 4 (lower is better) Translates to: LLKNCFGVTVLSLPVGYLHFSAP*ASYSTP Trigger: TGGCGTGGAGTACGAAGCCCAGGGTGCTGAGAAATG...CAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAACGAGGTAGTTGCCGTTaGGGTACCATTCCCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: PNKTHNFLFHKYPMIELERGSCR*GTIPQC Trigger: ACACTGGGGAATGGTACCTCAACGGCAACTACCTCG...TTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGAGAGGGCCTGCGACCTaGTTCTCATCCAGCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMRGPAT*FSSSPA Trigger: AGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCT...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | TTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTGTGAAGAGGGCCTaGGACCTGCTTCTCATCCAG | + |
Preference number: 4 (lower is better) Translates to: FLFHKYPMIELEKRLWNLAVKRA*DLLLIQ Trigger: CTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGC...AAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAACAAGCCAGGATTGGGATTaGATAGGCCGTCCGGGAATT | + |
Preference number: 4 (lower is better) Translates to: ATEFLMHPSPFPTKPFPTSQDWD*IGRPGI Trigger: AATTCCCGGACGGCCTATGCAATCCCAATCCTGGCT...TGTTGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGCACTGCCACCAGGACTaGCAGGCGCACCATGAGAAG | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMHCHQD*QAHHEK Trigger: CTTCTCATGGTGCGCCTGGCAGTCCTGGTGGCAGTG...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGAAGCCTTGTTCACAGGATGTTGTTGAGTaGGATGATGATTGCAGCGAT | + |
Preference number: 4 (lower is better) Translates to: LLKITKSENGRREGKPCSQDVVE*DDDCSD Trigger: ATCGCTGCAATCATCATCGCACTCAACAACATCCTG...TGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | TTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGAGAGAGCGGGAGGATaGTCCCCACGGACACAAATA | + |
Preference number: 4 (lower is better) Translates to: FLFHKYPMIELEKRLWNLERAGG*SPRTQI Trigger: TATTTGTGTCCGTGGGGATCATCCTCCCGCTCTCTC...AAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAGAGAGAGCGGGAGGATaGTCCCCACGGACACAAATA | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKERAGG*SPRTQI Trigger: TATTTGTGTCCGTGGGGATCATCCTCCCGCTCTCTC...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAACTGCCAGGCGCACCATaGGAAGAGCCGTATCAAATG | + |
Preference number: 4 (lower is better) Translates to: LIPQTNIPIKTTKMSFRQLPGAP*EEPYQM Trigger: CATTTGATACGGCTCTTCTCATGGTGCGCCTGGCAG...TTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCCTGCCAGGCGCACCATaGGAAGAGCCGTATCAAATG | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFLPGAP*EEPYQM Trigger: CATTTGATACGGCTCTTCTCATGGTGCGCCTGGCAG...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCACTGCCAGGCGCACCATaGGAAGAGCCGTATCAAATG | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSLPGAP*EEPYQM Trigger: CATTTGATACGGCTCTTCTCATGGTGCGCCTGGCAG...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAATGCTTCAGCCAGCTaGAGGGTTTCCTTGGAAACA | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPNASAS*RVSLET Trigger: TGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATT...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CTCCAATGGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATTCCCTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: LQWTDKYPWIFEPTSLIPFKSHE*SDYFRQ Trigger: CTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAA...GGGAATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ACCATTCCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGTCCCGGTGTTGGCCATaGCATAGGACAAGCCTAAGA | + |
Preference number: 4 (lower is better) Translates to: TIPNKTHNFLFHKYPMIESRCWP*HRTSLR Trigger: TCTTAGGCTTGTCCTATGCCATGGCCAACACCGGGA...CTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGGAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCTCCCGGTGTTGGCCATaGCATAGGACAAGCCTAAGA | + |
Preference number: 4 (lower is better) Translates to: MCATEFLMHPSPFPTKPFSRCWP*HRTSLR Trigger: TCTTAGGCTTGTCCTATGCCATGGCCAACACCGGGA...GAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAACTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATC | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKLIQPS*VVVSVI Trigger: GATTACGCTCACCACAACCCAGCTGGGCTGGATGAG...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCACTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATC | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSLIQPS*VVVSVI Trigger: GATTACGCTCACCACAACCCAGCTGGGCTGGATGAG...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCACATTTCTCAGCACCCTaGGCTTCGTACTCCACGCCA | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSHFSAP*ASYSTP Trigger: TGGCGTGGAGTACGAAGCCCAGGGTGCTGAGAAATG...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAACATTTCTCAGCACCCTaGGCTTCGTACTCCACGCCA | + |
Preference number: 4 (lower is better) Translates to: LIPQTNIPIKTTKMSFRQHFSAP*ASYSTP Trigger: TGGCGTGGAGTACGAAGCCCAGGGTGCTGAGAAATG...TTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGCATAGCAAAAGCCAGGATTaGGATTGCATAGGCCGTCCG | + |
Preference number: 4 (lower is better) Translates to: LKNCFGVTVLSLPVGYLHSKSQD*DCIGRP Trigger: CGGACGGCCTATGCAATCCCAATCCTGGCTTTTGCT...ATGCAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCGGGAACAGCACGATaGGCACGGTCAGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMSGTAR*ARSVSL Trigger: CAGTGACACTGACCGTGCCCATCGTGCTGTTCCCGA...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR CCA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAATCGGGAACAGCACGATaGGCACGGTCAGTGTCACTG | + |
Preference number: 4 (lower is better) Translates to: VKMCATEFLMHPSPFPTKSGTAR*ARSVSL Trigger: CAGTGACACTGACCGTGCCCATCGTGCTGTTCCCGA...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
||
CDS-3UTR CCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCAC | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPAEGFP*KQQCDH Trigger: GTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGC...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR TCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAAGATTTCCGTTGTTGTaGTCCAGAGCAGGCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKRFPLL*SRAGRG Trigger: CCCTCTGCCTGCTCTGGATCACAACAACGGAAATCT...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR TCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGATTTCCGTTGTTGTaGTCCAGAGCAGGCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFRFPLL*SRAGRG Trigger: CCCTCTGCCTGCTCTGGATCACAACAACGGAAATCT...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR TCA 90 bp | CACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCGAGCGTAATCCATCATaGAGTTCACACCCGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: HKYPMIELEKRLWNLANSERNPS*SSHPSS Trigger: AGAGCTCGGGTGTGAACTTCATGATGGATTACGCTC...GGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR TCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGCTGCCAGGCGCACCATaGGAAGAGCCGTATCAAATG | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMLPGAP*EEPYQM Trigger: CATTTGATACGGCTCTTCTCATGGTGCGCCTGGCAG...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR GCA 90 bp | ATAGAGATGTATCAAACAATACTGGGTAGTGTGTCTCCACACGGACTGTGGTCTTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: IEMYQTILGSVSPHGLWSFKSHE*SDYFRQ Trigger: CTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAA...AGACCACAGTCCGTGTGGAGACACACTACCCAGTATTGTTTGATACATCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
||
CDS-3UTR GCA 90 bp | ACAACTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: TTKMSFRQFQLFPVETRLFKSHE*SDYFRQ Trigger: CTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAA...GAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCAAGCCAGGATTGGGATTaGATAGGCCGTCCGGGAATT | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSSQDWD*IGRPGI Trigger: AATTCCCGGACGGCCTATGCAATCCCAATCCTGGCT...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR GCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGCCAGGATTGGGATTaGATAGGCCGTCCGGGAATT | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFSQDWD*IGRPGI Trigger: AATTCCCGGACGGCCTATGCAATCCCAATCCTGGCT...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
||
CDS-3UTR GCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCCAGGATGTTGTTGAGTaGGATGATGATTGCAGCGAT | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPQDVVE*DDDCSD Trigger: ATCGCTGCAATCATCATCGCACTCAACAACATCCTG...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAATCCCGGTGTTGGCCATaGCATAGGACAAGCCTAAGA | + |
Preference number: 4 (lower is better) Translates to: LIPQTNIPIKTTKMSFRQSRCWP*HRTSLR Trigger: TCTTAGGCTTGTCCTATGCCATGGCCAACACCGGGA...TTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCAC | + |
Preference number: 4 (lower is better) Translates to: CATEFLMHPSPFPTKPFPAEGFP*KQQCDH Trigger: GTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGC...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | ATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAATTTAGATTTCCGTTGTTGTaGTCCAGAGCAGGCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: IPQTNIPIKTTKMSFRQFRFPLL*SRAGRG Trigger: CCCTCTGCCTGCTCTGGATCACAACAACGGAAATCT...AAATTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCAGAGCGTAATCCATCATaGAGTTCACACCCGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSERNPS*SSHPSS Trigger: AGAGCTCGGGTGTGAACTTCATGATGGATTACGCTC...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | CTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAAGAGCGTAATCCATCATaGAGTTCACACCCGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: LIPQTNIPIKTTKMSFRQERNPS*SSHPSS Trigger: AGAGCTCGGGTGTGAACTTCATGATGGATTACGCTC...TTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAAGGCCGTCCGGGAATTaGACACAAAGTATTTTGGTT | + |
Preference number: 4 (lower is better) Translates to: CATEFLMHPSPFPTKPFPRPSGN*TQSILV Trigger: AACCAAAATACTTTGTGTTCAATTCCCGGACGGCCT...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAACAGTAGAGCGAGAGTATTaGCACAGTAAGCAGCATGAT | + |
Preference number: 4 (lower is better) Translates to: ATEFLMHPSPFPTKPFPTVEREY*HSKQHD Trigger: ATCATGCTGCTTACTGTGGCAATACTCTCGCTCTAC...TGTTGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCACAAAGTATTTTGGTTaGCATTTCTCAGCACCCTGG | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPTKYFG*HFSAPW Trigger: CCAGGGTGCTGAGAAATGCCAACCAAAATACTTTGT...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGAGCAAAAGCCAGGATTaGGATTGCATAGGCCGTCCG | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMSKSQD*DCIGRP Trigger: CGGACGGCCTATGCAATCCCAATCCTGGCTTTTGCT...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCACTGAGATGGAAATGTTaGACACCGTCTGCATCTTTC | + |
Preference number: 4 (lower is better) Translates to: CATEFLMHPSPFPTKPFPLRWKC*TPSASF Trigger: GAAAGATGCAGACGGTGTCCAACATTTCCATCTCAG...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTGTTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGCTGAGATGGAAATGTTaGACACCGTCTGCATCTTTC | + |
Preference number: 4 (lower is better) Translates to: LLKNCFGVTVLSLPVGYLLRWKC*TPSASF Trigger: GAAAGATGCAGACGGTGTCCAACATTTCCATCTCAG...CAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CTGTTGAAAAACTGCTTTGGTGTGACAGTACTATCACTACCTGTAGGATACTTGAAAGCCCCAATCTTCTaGGGTGATCTTAGAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: LLKNCFGVTVLSLPVGYLKAPIF*GDLRGS Trigger: AGAACCTCTAAGATCACCCCAGAAGATTGGGGCTTT...CAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAAGCAGTTTTTCAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCTTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTA | + |
Preference number: 4 (lower is better) Translates to: VCHRIFNASFTIPNKTIPFVRNF*LSASSL Trigger: TAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAA...GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | ATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCTGTAAATCACCACACTaGCGAAAAACACCATGCAGG | + |
Preference number: 4 (lower is better) Translates to: MCATEFLMHPSPFPTKPFCKSPH*RKTPCR Trigger: CCTGCATGGTGTTTTTCGTCAGTGTGGTGATTTACA...GAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGGAGCGTAATCCATCATaGAGTTCACACCCGAGCTCT | + |
Preference number: 4 (lower is better) Translates to: FGILLIPQTNIPIKTTKMERNPS*SSHPSS Trigger: AGAGCTCGGGTGTGAACTTCATGATGGATTACGCTC...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | ATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCAGGCCGTCCGGGAATTaGACACAAAGTATTTTGGTT | + |
Preference number: 4 (lower is better) Translates to: MCATEFLMHPSPFPTKPFRPSGN*TQSILV Trigger: AACCAAAATACTTTGTGTTCAATTCCCGGACGGCCT...GAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCAAATGCTTCAGCCAGCTaGAGGGTTTCCTTGGAAACA | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSNASAS*RVSLET Trigger: TGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATT...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ACAACTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCATGGCTCCAATGTTCTaGATTGTAATAGAGATGAAG | + |
Preference number: 4 (lower is better) Translates to: TTKMSFRQFQLFPVETRLMAPMF*IVIEMK Trigger: CTTCATCTCTATTACAATGCAGAACATTGGAGCCAT...GAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCAC | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKAEGFP*KQQCDH Trigger: GTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGC...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAATGTAAATCACCACACTaGCGAAAAACACCATGCAGG | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKCKSPH*RKTPCR Trigger: CCTGCATGGTGTTTTTCGTCAGTGTGGTGATTTACA...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGGCCGTCCGGGAATTaGACACAAAGTATTTTGGTT | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFRPSGN*TQSILV Trigger: AACCAAAATACTTTGTGTTCAATTCCCGGACGGCCT...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAAAATGCTTCAGCCAGCTaGAGGGTTTCCTTGGAAACA | + |
Preference number: 4 (lower is better) Translates to: VKMCATEFLMHPSPFPTKNASAS*RVSLET Trigger: TGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATT...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAGTAGAGCGAGAGTATTaGCACAGTAAGCAGCATGAT | + |
Preference number: 4 (lower is better) Translates to: VFGILLIPQTNIPIKTTKVEREY*HSKQHD Trigger: ATCATGCTGCTTACTGTGGCAATACTCTCGCTCTAC...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: HKYPMIELEKRLWNLANSFKSHE*SDYFRQ Trigger: CTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAA...GGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | GCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAACAGAACACAAAGTATTTTaGTTGGCATTTCTCAGCACC | + |
Preference number: 4 (lower is better) Translates to: ATEFLMHPSPFPTKPFPTEHKVF*LAFLST Trigger: GGTGCTGAGAAATGCCAACCAAAATACTTTGTGTTC...TGTTGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAAAGCCCCAATCTTCTaGGGTGATCTTAGAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFKAPIF*GDLRGS Trigger: AGAACCTCTAAGATCACCCCAGAAGATTGGGGCTTT...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCAAAAGCCCCAATCTTCTaGGGTGATCTTAGAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSKAPIF*GDLRGS Trigger: AGAACCTCTAAGATCACCCCAGAAGATTGGGGCTTT...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAAAGGCCGTCCGGGAATTaGACACAAAGTATTTTGGTT | + |
Preference number: 4 (lower is better) Translates to: VKMCATEFLMHPSPFPTKRPSGN*TQSILV Trigger: AACCAAAATACTTTGTGTTCAATTCCCGGACGGCCT...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
||
CDS-3UTR GCA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAAGTAGAGCGAGAGTATTaGCACAGTAAGCAGCATGAT | + |
Preference number: 4 (lower is better) Translates to: VKMCATEFLMHPSPFPTKVEREY*HSKQHD Trigger: ATCATGCTGCTTACTGTGGCAATACTCTCGCTCTAC...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAATTTCAGGATGTTGTTGAGTaGGATGATGATTGCAGCGAT | + |
Preference number: 4 (lower is better) Translates to: IPQTNIPIKTTKMSFRQFQDVVE*DDDCSD Trigger: ATCGCTGCAATCATCATCGCACTCAACAACATCCTG...AAATTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | AAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCTCAACAAAGTATTTTGGTTaGCATTTCTCAGCACCCTGG | + |
Preference number: 4 (lower is better) Translates to: KYPMIELEKRLWNLANSSTKYFG*HFSAPW Trigger: CCAGGGTGCTGAGAAATGCCAACCAAAATACTTTGT...TGAGGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | CCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAGAACACAAAGTATTTTaGTTGGCATTTCTCAGCACC | + |
Preference number: 4 (lower is better) Translates to: PNKTHNFLFHKYPMIELEEHKVF*LAFLST Trigger: GGTGCTGAGAAATGCCAACCAAAATACTTTGTGTTC...TTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ACCATTCCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGGAACACAAAGTATTTTaGTTGGCATTTCTCAGCACC | + |
Preference number: 4 (lower is better) Translates to: TIPNKTHNFLFHKYPMIEEHKVF*LAFLST Trigger: GGTGCTGAGAAATGCCAACCAAAATACTTTGTGTTC...CTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGGAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACTGAGATGGAAATGTTaGACACCGTCTGCATCTTTC | + |
Preference number: 4 (lower is better) Translates to: VKMCATEFLMHPSPFPTKLRWKC*TPSASF Trigger: GAAAGATGCAGACGGTGTCCAACATTTCCATCTCAG...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
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CDS-3UTR TCA 90 bp | TTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTTTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTA | + |
Preference number: 4 (lower is better) Translates to: FLFHKYPMIELEKRLWNLFVRNF*LSASSL Trigger: TAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAA...AAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | CCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAATGGCTCCAATGTTCTaGATTGTAATAGAGATGAAG | + |
Preference number: 4 (lower is better) Translates to: PNKTHNFLFHKYPMIELEMAPMF*IVIEMK Trigger: CTTCATCTCTATTACAATGCAGAACATTGGAGCCAT...TTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CCA 90 bp | ATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCGAACACAAAGTATTTTaGTTGGCATTTCTCAGCACC | + |
Preference number: 4 (lower is better) Translates to: ILLIPQTNIPIKTTKMSFEHKVF*LAFLST Trigger: GGTGCTGAGAAATGCCAACCAAAATACTTTGTGTTC...GAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR GCA 90 bp | ATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAATTTATGGCTCCAATGTTCTaGATTGTAATAGAGATGAAG | + |
Preference number: 4 (lower is better) Translates to: IPQTNIPIKTTKMSFRQFMAPMF*IVIEMK Trigger: CTTCATCTCTATTACAATGCAGAACATTGGAGCCAT...AAATTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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3UTR CAA 72 bp | TTTGGTGTGACAGTACTATCACTACCTGTAGGATACTaGCATTTCAGACTTGGCTTTTTACTGAAATGTAAA | + |
Preference number: 4 (lower is better) Translates to: FGVTVLSLPVGY*HFRLGFLLKCK Trigger: TTTACATTTCAGTAAAAAGCCAAGTCTGAAATGCAAGTATCCTACAGGTAGTGATAGTACTGTCACACCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS GCA 90 bp | AGCACCCTGGGCTTCGTACTCCACGCCATTGCTGTGAAGAGGGCCTaGGACCTGCTTCTCATCCAGCCCAGCTGGGTTGTGGTGAGCGTA | + |
Preference number: 5 (lower is better) Translates to: STLGFVLHAIAVKRA*DLLLIQPSWVVVSV Trigger: TACGCTCACCACAACCCAGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGCAATGGCGTGGAGTACGAAGCCCAGGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 90 bp | ATTGCTGTGAAGAGGGCCTGCGACCTGCTTCTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATCCATCATGAAGTTCACACCCGAGCT | + |
Preference number: 5 (lower is better) Translates to: IAVKRACDLLLIQPS*VVVSVIHHEVHTRA Trigger: AGCTCGGGTGTGAACTTCATGATGGATTACGCTCACCACAACCCAGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS GCA 90 bp | GGTAGGCACGAGGATGACCAGGATGTTGTTGAGTGCGATGATGATTaGAGCGATCCCGAAATGCTTCAGCCAGCTGAAGGGTTTCCTTGG | + |
Preference number: 5 (lower is better) Translates to: GRHEDDQDVVECDDD*SDPEMLQPAEGFPW Trigger: CCAAGGAAACCCTTCAGCTGGCTGAAGCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 90 bp | GATTGCAGCGATCCCGAAATGCTTCAGCCAGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCACCGAAGTACGGATCGGGAACAGCAC | + |
Preference number: 5 (lower is better) Translates to: DCSDPEMLQPAEGFP*KQQCDHRSTDREQH Trigger: GTGCTGTTCCCGATCCGTACTTCGGTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATTTCGGGATCGCTGCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | AGAGTGAGAACGGAAGACGAGAGGGGAAGCCTTGTTCAAAGACAAAGTGGAACAAAGCCAGGATTGGGATaGCATAGGCCGTCCGGGAAT | + |
Preference number: 5 (lower is better) Translates to: RVRTEDERGSLVQRQSGTKPGLG*HRPSGN Trigger: ATTCCCGGACGGCCTATGCAATCCCAATCCTGGCTT...TGTTCCACTTTGTCTTTGAACAAGGCTTCCCCTCTCGTCTTCCGTTCTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS GCA 90 bp | GATGTATTTGATGGTAGGCACGAGGATGACCAGGATGTTGTTGAGTaGGATGATGATTGCAGCGATCCCGAAATGCTTCAGCCAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: DVFDGRHEDDQDVVE*DDDCSDPEMLQPAE Trigger: TTCAGCTGGCTGAAGCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | ATAGAGATGTATCAAACAATACTGGGTAGTGTGTCTCCACACGGACTGTGGTCTGGTTCGATGCTGACGTaGTTCAGTTCCATGGGGTCC | + |
Preference number: 5 (lower is better) Translates to: IEMYQTILGSVSPHGLWSGSMLT*FSSMGS Trigger: GGACCCCATGGAACTGAACAACGTCAGCATCGAACC...AGACCACAGTCCGTGTGGAGACACACTACCCAGTATTGTTTGATACATCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | AAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCCCCGGGCACAAAGTATTTTGGTaGGCATTTCTCAGCACCCTG | + |
Preference number: 5 (lower is better) Translates to: KMSFRQFQLFPVETRLPGHKVFW*AFLSTL Trigger: CAGGGTGCTGAGAAATGCCAACCAAAATACTTTGTG...CCCGGGGAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | ACGGACTGTGGTCTTCTGAAAATTACGAAGAGTGAGAACGGAAGACGAGAGGGGCACAAAGTATTTTGGTaGGCATTTCTCAGCACCCTG | + |
Preference number: 5 (lower is better) Translates to: TDCGLLKITKSENGRREGHKVFW*AFLSTL Trigger: CAGGGTGCTGAGAAATGCCAACCAAAATACTTTGTG...CCCCTCTCGTCTTCCGTTCTCACTCTTCGTAATTTTCAGAAGACCACAGTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | ACAACTAAAATGTCCTTCAGACAATTTCAGCTGTTTCCAGTGGAGACGCGTCTCAAGCAAAAGCCAGGATaGGGATTGCATAGGCCGTCC | + |
Preference number: 5 (lower is better) Translates to: TTKMSFRQFQLFPVETRLKQKPG*GLHRPS Trigger: GGACGGCCTATGCAATCCCAATCCTGGCTTTTGCTT...GAGACGCGTCTCCACTGGAAACAGCTGAAATTGTCTGAAGGACATTTTAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | GCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAACAGGTTCGATGCTGACGTaGTTCAGTTCCATGGGGTCC | + |
Preference number: 5 (lower is better) Translates to: ATEFLMHPSPFPTKPFPTGSMLT*FSSMGS Trigger: GGACCCCATGGAACTGAACAACGTCAGCATCGAACC...TGTTGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAAAGCCAGGATTGGGATaGCATAGGCCGTCCGGGAAT | + |
Preference number: 5 (lower is better) Translates to: CATEFLMHPSPFPTKPFPKPGLG*HRPSGN Trigger: ATTCCCGGACGGCCTATGCAATCCCAATCCTGGCTT...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 90 bp | TCGGCTAGCTTCTTCTTCCCTAAAAACCCATTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTAGCAAATTGGCTGTTCATGGCGTCC | + |
Preference number: 5 (lower is better) Translates to: SASFFFPKNPFVRNF*LSASSLANWLFMAS Trigger: GGACGCCATGAACAGCCAATTTGCTAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAATGGGTTTTTAGGGAAGAAGAAGCTAGCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS GCA 90 bp | CTTGGCTGTCTTCAGCAAAAGGTGAACCGAGTAGAGCGAGAGTATTaGCACAGTAAGCAGCATGATTATAAAAAGGATGATCCCGGTGTT | + |
Preference number: 5 (lower is better) Translates to: LGCLQQKVNRVEREY*HSKQHDYKKDDPGV Trigger: AACACCGGGATCATCCTTTTTATAATCATGCTGCTTACTGTGGCAATACTCTCGCTCTACTCGGTTCACCTTTTGCTGAAGACAGCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS CCA 90 bp | ATGCTTTCTCGCCCAATTTTTCATAGATTAGAGACCCTCCTTCCTTaGCTGTCTTCAGCAAAAGGTGAACCGAGTAGAGCGAGAGTATTG | + |
Preference number: 5 (lower is better) Translates to: MLSRPIFHRLETLLP*LSSAKGEPSRARVL Trigger: CAATACTCTCGCTCTACTCGGTTCACCTTTTGCTGAAGACAGCCAAGGAAGGAGGGTCTCTAATCTATGAAAAATTGGGCGAGAAAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | ATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCGGTTCGATGCTGACGTaGTTCAGTTCCATGGGGTCC | + |
Preference number: 5 (lower is better) Translates to: MCATEFLMHPSPFPTKPFGSMLT*FSSMGS Trigger: GGACCCCATGGAACTGAACAACGTCAGCATCGAACC...GAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | TGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAACCATTCCCAAAGCAAAAGCCAGGATaGGGATTGCATAGGCCGTCC | + |
Preference number: 5 (lower is better) Translates to: CATEFLMHPSPFPTKPFPKQKPG*GLHRPS Trigger: GGACGGCCTATGCAATCCCAATCCTGGCTTTTGCTT...TGGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS GCA 90 bp | GCCGTTGAGGTACCATTCCCCAGTGTTTTCTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAGTTCGTACTTAATGATGAAGAGGTA | + |
Preference number: 5 (lower is better) Translates to: AVEVPFPSVFFKSHE*SDYFRQFVLNDEEV Trigger: TACCTCTTCATCATTAAGTACGAACTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAAGAAAACACTGGGGAATGGTACCTCAACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAGGTTCGATGCTGACGTaGTTCAGTTCCATGGGGTCC | + |
Preference number: 5 (lower is better) Translates to: VFGILLIPQTNIPIKTTKGSMLT*FSSMGS Trigger: GGACCCCATGGAACTGAACAACGTCAGCATCGAACC...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAAAGCCAGGATTGGGATaGCATAGGCCGTCCGGGAAT | + |
Preference number: 5 (lower is better) Translates to: VFGILLIPQTNIPIKTTKKPGLG*HRPSGN Trigger: ATTCCCGGACGGCCTATGCAATCCCAATCCTGGCTT...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | CACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCAAGCAAAAGCCAGGATaGGGATTGCATAGGCCGTCC | + |
Preference number: 5 (lower is better) Translates to: HKYPMIELEKRLWNLANSKQKPG*GLHRPS Trigger: GGACGGCCTATGCAATCCCAATCCTGGCTTTTGCTT...GGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | CTCCAATGGACAGATAAGTACCCATGGATTTTTGAGCCCACCAGCTTAATTCCCAATCCAAAGATGTATTaGATGGTAGGCACGAGGATG | + |
Preference number: 5 (lower is better) Translates to: LQWTDKYPWIFEPTSLIPNPKMY*MVGTRM Trigger: CATCCTCGTGCCTACCATCAAATACATCTTTGGATT...GGGAATTAAGCTGGTGGGCTCAAAAATCCATGGGTACTTATCTGTCCATTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023101.10 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | GTCTTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAAAGCAAAAGCCAGGATaGGGATTGCATAGGCCGTCC | + |
Preference number: 5 (lower is better) Translates to: VFGILLIPQTNIPIKTTKKQKPG*GLHRPS Trigger: GGACGGCCTATGCAATCCCAATCCTGGCTTTTGCTT...TTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | TTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTCACAAAGTATTTTGGTaGGCATTTCTCAGCACCCTG | + |
Preference number: 5 (lower is better) Translates to: FLFHKYPMIELEKRLWNLHKVFW*AFLSTL Trigger: CAGGGTGCTGAGAAATGCCAACCAAAATACTTTGTG...AAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | CTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGTCCTTCAGACAACACAAAGTATTTTGGTaGGCATTTCTCAGCACCCTG | + |
Preference number: 5 (lower is better) Translates to: LIPQTNIPIKTTKMSFRQHKVFW*AFLSTL Trigger: CAGGGTGCTGAGAAATGCCAACCAAAATACTTTGTG...TTGTCTGAAGGACATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | CCCAACAAAACCCATAATTTTCTCTTCCACAAGTATCCCATGATAGAGCTAGAAAATCCAAAGATGTATTaGATGGTAGGCACGAGGATG | + |
Preference number: 5 (lower is better) Translates to: PNKTHNFLFHKYPMIELENPKMY*MVGTRM Trigger: CATCCTCGTGCCTACCATCAAATACATCTTTGGATT...TTCTAGCTCTATCATGGGATACTTGTGGAAGAGAAAATTATGGGTTTTGTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | CACAAGTATCCCATGATAGAGCTAGAAAAACGTCTTTGGAATCTTGCTAATTCCAATCCAAAGATGTATTaGATGGTAGGCACGAGGATG | + |
Preference number: 5 (lower is better) Translates to: HKYPMIELEKRLWNLANSNPKMY*MVGTRM Trigger: CATCCTCGTGCCTACCATCAAATACATCTTTGGATT...GGAATTAGCAAGATTCCAAAGACGTTTTTCTAGCTCTATCATGGGATACTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | GTTAAAATGTGTGCCACAGAATTTTTAATGCATCCTTCACCATTCCCAACAAAAATCTTCATTAGCAAATaGGCTGTTCATGGCGTCCTT | + |
Preference number: 5 (lower is better) Translates to: VKMCATEFLMHPSPFPTKIFISK*AVHGVL Trigger: AAGGACGCCATGAACAGCCAATTTGCTAATGAAGAT...TTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGCACACATTTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000231039.2 |
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CDS-3UTR CAA 90 bp | TTTGGAATCTTGCTAATTCCTCAGACTAACATCCCAATCAAGACAACTAAAATGAATCCAAAGATGTATTaGATGGTAGGCACGAGGATG | + |
Preference number: 5 (lower is better) Translates to: FGILLIPQTNIPIKTTKMNPKMY*MVGTRM Trigger: CATCCTCGTGCCTACCATCAAATACATCTTTGGATT...CATTTTAGTTGTCTTGATTGGGATGTTAGTCTGAGGAATTAGCAAGATTCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 72 bp | TCAGCACCCTGGGCTTCGTACTCCACGCCATTGCTGTaGAGAGGGCCTGCGACCTGCTTCTCATCCAGCCCA | + |
Preference number: 6 (lower is better) Translates to: SAPWASYSTPLL*RGPATCFSSSP Trigger: TGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCTTCACAGCAATGGCGTGGAGTACGAAGCCCAGGGTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS GCA 72 bp | CACGATGGGCACGGTCAGTGTCACTGCCACCAGGACTaGCAGGCGCACCATGAGAAGAGCCGTATCAAATGT | + |
Preference number: 6 (lower is better) Translates to: HDGHGQCHCHQD*QAHHEKSRIKC Trigger: ACATTTGATACGGCTCTTCTCATGGTGCGCCTGGCAGTCCTGGTGGCAGTGACACTGACCGTGCCCATCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 72 bp | AAGAGGGCCTGCGACCTGCTTCTCATCCAGCCCAGCTaGGTTGTGGTGAGCGTAATCCATCATGAAGTTCAC | + |
Preference number: 6 (lower is better) Translates to: KRACDLLLIQPS*VVVSVIHHEVH Trigger: GTGAACTTCATGATGGATTACGCTCACCACAACCCAGCTGGGCTGGATGAGAAGCAGGTCGCAGGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 72 bp | GATCCCGAAATGCTTCAGCCAGCTGAAGGGTTTCCTTaGAAACAGCAGTGTGATCACCGAAGTACGGATCGG | + |
Preference number: 6 (lower is better) Translates to: DPEMLQPAEGFP*KQQCDHRSTDR Trigger: CCGATCCGTACTTCGGTGATCACACTGCTGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATTTCGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 90 bp | AGGGCCGCAAGAAGGTACATGACGAGCATGCCTGAGATGGAAATGTaGGACACCGTCTGCATCTTTCTGCGGGATCGATCTTTAAGCTCG | + |
Preference number: 6 (lower is better) Translates to: RAARRYMTSMPEMEM*DTVCIFLRDRSLSS Trigger: CGAGCTTAAAGATCGATCCCGCAGAAAGATGCAGACGGTGTCCAACATTTCCATCTCAGGCATGCTCGTCATGTACCTTCTTGCGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 72 bp | CCCGAGCTCTCCGAGTCATTAGGCAGCGAGATCATGTaGATCGGAAGTGTGTTGTTGAACGTCAGATTTCCG | + |
Preference number: 6 (lower is better) Translates to: PELSESLGSEIM*IGSVLLNVRFP Trigger: CGGAAATCTGACGTTCAACAACACACTTCCGATTCACATGATCTCGCTGCCTAATGACTCGGAGAGCTCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 72 bp | AAAGAGGGCCGCAAGAAGGTACATGACGAGCATGCCTaGGATGGAAATGTTGGACACCGTCTGCATCTTTCT | + |
Preference number: 6 (lower is better) Translates to: KEGRKKVHDEHA*DGNVGHRLHLS Trigger: AGAAAGATGCAGACGGTGTCCAACATTTCCATCTCAGGCATGCTCGTCATGTACCTTCTTGCGGCCCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS GCA 72 bp | TTGTTGAGTGCGATGATGATTGCAGCGATCCCGAAATaGTTCAGCCAGCTGAAGGGTTTCCTTGGAAACAGC | + |
Preference number: 6 (lower is better) Translates to: LLSAMMIAAIPK*FSQLKGFLGNS Trigger: GCTGTTTCCAAGGAAACCCTTCAGCTGGCTGAAGCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 72 bp | AGAAGGTACATGACGAGCATGCCTGAGATGGAAATGTaGGACACCGTCTGCATCTTTCTGCGGGATCGATCT | + |
Preference number: 6 (lower is better) Translates to: RRYMTSMPEMEM*DTVCIFLRDRS Trigger: AGATCGATCCCGCAGAAAGATGCAGACGGTGTCCAACATTTCCATCTCAGGCATGCTCGTCATGTACCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 90 bp | CCAAAGATGTATTTGATGGTAGGCACGAGGATGACCAGGATGTTGTaGAGTGCGATGATGATTGCAGCGATCCCGAAATGCTTCAGCCAG | + |
Preference number: 6 (lower is better) Translates to: PKMYLMVGTRMTRML*SAMMIAAIPKCFSQ Trigger: CTGGCTGAAGCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATACATCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 72 bp | CGCCCAATTTTTCATAGATTAGAGACCCTCCTTCCTTaGCTGTCTTCAGCAAAAGGTGAACCGAGTAGAGCG | + |
Preference number: 6 (lower is better) Translates to: RPIFHRLETLLP*LSSAKGEPSRA Trigger: CGCTCTACTCGGTTCACCTTTTGCTGAAGACAGCCAAGGAAGGAGGGTCTCTAATCTATGAAAAATTGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS CAA 72 bp | TATTTGATGGTAGGCACGAGGATGACCAGGATGTTGTaGAGTGCGATGATGATTGCAGCGATCCCGAAATGC | + |
Preference number: 6 (lower is better) Translates to: YLMVGTRMTRML*SAMMIAAIPKC Trigger: GCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 90 bp | CCCATTTGTCAGGAACTTCTGACTTTCGGCATCTTCATTAGCAAATaGGCTGTTCATGGCGTCCTTGTCGGAGTTTTCCATGCCGGTGTA | + |
Preference number: 6 (lower is better) Translates to: PICQELLTFGIFISK*AVHGVLVGVFHAGV Trigger: TACACCGGCATGGAAAACTCCGACAAGGACGCCATGAACAGCCAATTTGCTAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS CAA 90 bp | AATCCAAAGATGTATTTGATGGTAGGCACGAGGATGACCAGGATGTaGTTGAGTGCGATGATGATTGCAGCGATCCCGAAATGCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: NPKMYLMVGTRMTRM*LSAMMIAAIPKCFS Trigger: GCTGAAGCATTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATACATCTTTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 72 bp | AAGCCAGGATTGGGATTGCATAGGCCGTCCGGGAATTaGACACAAAGTATTTTGGTTGGCATTTCTCAGCAC | + |
Preference number: 6 (lower is better) Translates to: KPGLGLHRPSGN*TQSILVGISQH Trigger: GTGCTGAGAAATGCCAACCAAAATACTTTGTGTTCAATTCCCGGACGGCCTATGCAATCCCAATCCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CCA 72 bp | ATTCCAGTCACAAGGAAGACCAAAGCCCCAATCTTCTaGGGTGATCTTAGAGGTTCTTTCTTGACGAGCTTG | + |
Preference number: 6 (lower is better) Translates to: IPVTRKTKAPIF*GDLRGSFLTSL Trigger: CAAGCTCGTCAAGAAAGAACCTCTAAGATCACCCCAGAAGATTGGGGCTTTGGTCTTCCTTGTGACTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 72 bp | ATGTATTTGATGGTAGGCACGAGGATGACCAGGATGTaGTTGAGTGCGATGATGATTGCAGCGATCCCGAAA | + |
Preference number: 6 (lower is better) Translates to: MYLMVGTRMTRM*LSAMMIAAIPK Trigger: TTTCGGGATCGCTGCAATCATCATCGCACTCAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 72 bp | GTGGCAGAAGAAGCCCCTATGAATCCAAAGATGTATTaGATGGTAGGCACGAGGATGACCAGGATGTTGTTG | + |
Preference number: 6 (lower is better) Translates to: VAEEAPMNPKMY*MVGTRMTRMLL Trigger: CAACAACATCCTGGTCATCCTCGTGCCTACCATCAAATACATCTTTGGATTCATAGGGGCTTCTTCTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS CAA 72 bp | CAGGAACTTCTGACTTTCGGCATCTTCATTAGCAAATaGGCTGTTCATGGCGTCCTTGTCGGAGTTTTCCAT | + |
Preference number: 6 (lower is better) Translates to: QELLTFGIFISK*AVHGVLVGVFH Trigger: ATGGAAAACTCCGACAAGGACGCCATGAACAGCCAATTTGCTAATGAAGATGCCGAAAGTCAGAAGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |
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CDS GCA 72 bp | GTACCATTCCCCAGTGTTTTCTTCAAGTCCCATGAATaGTCTGATTACTTCAGGCAGTTCGTACTTAATGAT | + |
Preference number: 6 (lower is better) Translates to: VPFPSVFFKSHE*SDYFRQFVLND Trigger: ATCATTAAGTACGAACTGCCTGAAGTAATCAGAGCATTCATGGGACTTGAAGAAAACACTGGGGAATGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000231039.2 |
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CDS TCA 72 bp | TTCTTCTTCCCTAAAAACCCATTTGTCAGGAACTTCTaGCTTTCGGCATCTTCATTAGCAAATTGGCTGTTC | + |
Preference number: 6 (lower is better) Translates to: FFFPKNPFVRNF*LSASSLANWLF Trigger: GAACAGCCAATTTGCTAATGAAGATGCCGAAAGTCAGAAGTTCCTGACAAATGGGTTTTTAGGGAAGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023101.10 ENSMUST00000166223.2 ENSMUST00000230086.2 ENSMUST00000230907.2 ENSMUST00000231039.2 |