Pregenerated sensors for SLC38A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023169Ensembl transcript IDs: ENSMUST00000088452.11, ENSMUST00000088454.13, ENSMUST00000100262.4, ENSMUST00000230767.2
Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGCACACGACGCCCTCCCTTTCCTGAACCTGCACACACTGGCTaGGGTCCTTTCCTACCCTACCTGGCTCTCATTCCTCACCCCGGG | + |
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Preference number: 1 (lower is better) Translates to: GCTRRPPFPEPAHTG*GPFLPYLALIPHPG Trigger: CCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAGGAAAGGACCCCAGCCAGTGTGTGCAGGTTCAGGAAAGGGAGGGCGTCGTGTGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CCA 90 bp | TATACAGAGGCGCCGTGCCCAAGCCTCCCAGGGAATCGCTCCACATaGGAGCAGGATGGAGTACCAGCAGCCCTCGGACAGTCCATGTCG | + |
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Preference number: 1 (lower is better) Translates to: YTEAPCPSLPGNRST*EQDGVPAALGQSMS Trigger: CGACATGGACTGTCCGAGGGCTGCTGGTACTCCATCCTGCTCCCATGTGGAGCGATTCCCTGGGAGGCTTGGGCACGGCGCCTCTGTATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR CCA 90 bp | TCCGTGGTTCTCAGAGTCTGCTCCCACACATCGTTCCCAGTCACGTaGCTCTCAGAGCCCACATGCTCACGCTGCCCCCAGCCATGTTGT | + |
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Preference number: 1 (lower is better) Translates to: SVVLRVCSHTSFPVT*LSEPTCSRCPQPCC Trigger: ACAACATGGCTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAGCCACGTGACTGGGAACGATGTGTGGGAGCAGACTCTGAGAACCACGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR GCA 90 bp | TGCTCCCACACATCGTTCCCAGTCACGTGGCTCTCAGAGCCCACATaGTCACGCTGCCCCCAGCCATGTTGTTCTCAGAGTCAGTTCGCA | + |
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Preference number: 1 (lower is better) Translates to: CSHTSFPVTWLSEPT*SRCPQPCCSQSQFA Trigger: TGCGAACTGACTCTGAGAACAACATGGCTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAGCCACGTGACTGGGAACGATGTGTGGGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR CCA 90 bp | TTCCTGAACCTGCACACACTGGCTGGGGTCCTTTCCTACCCTACCTaGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: FLNLHTLAGVLSYPT*LSFLTPGTNRLPRM Trigger: CATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAGGAAAGGACCCCAGCCAGTGTGTGCAGGTTCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | GGAGTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTaGCTCAAATATTGGGCATGCTCAGATGCAGCCATGGCACGCAAC | + |
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Preference number: 1 (lower is better) Translates to: GVPAALGQSMSGDQS*LKYWACSDAAMARN Trigger: GTTGCGTGCCATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR GCA 90 bp | CTCTGCAATGCATTGGCAGCAGGAAAGAACACAGGTAGTAGGGGCTaGACACGACGCCCTCCCTTTCCTGAACCTGCACACACTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LCNALAAGKNTGSRG*TRRPPFPEPAHTGW Trigger: CCAGCCAGTGTGTGCAGGTTCAGGAAAGGGAGGGCGTCGTGTGCAGCCCCTACTACCTGTGTTCTTTCCTGCTGCCAATGCATTGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR TCA 90 bp | GGAGCAGGATGGAGTACCAGCAGCCCTCGGACAGTCCATGTCGGGTaGTCAGAGCTGCCTCAAATATTGGGCATGCTCAGATGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: GAGWSTSSPRTVHVG*SELPQILGMLRCSH Trigger: ATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTACTCCATCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR CCA 90 bp | GAGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTaGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EENCGKGWTRWRHEI*RSRNPRSQSVGPER Trigger: CCTCTCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR CCA 90 bp | CCTGGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATaGGCTGACCGGAGAAAGCTTAGAGTGGTACCCAAGCTTGAAATC | + |
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Preference number: 1 (lower is better) Translates to: PGSHSSPREPIAFRG*ADRRKLRVVPKLEI Trigger: GATTTCAAGCTTGGGTACCACTCTAAGCTTTCTCCGGTCAGCCCATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CCA 90 bp | ACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACAAGATaGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: TMRRREENCGKGWTR*RHEIWRSRNPRSQS Trigger: ACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR GCA 90 bp | TACTTACACAGAAATGTTGTCCCCAGTTCCGTGGTTCTCAGAGTCTaGTCCCACACATCGTTCCCAGTCACGTGGCTCTCAGAGCCCACA | + |
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Preference number: 1 (lower is better) Translates to: YLHRNVVPSSVVLRV*SHTSFPVTWLSEPT Trigger: TGTGGGCTCTGAGAGCCACGTGACTGGGAACGATGTGTGGGAGCAGACTCTGAGAACCACGGAACTGGGGACAACATTTCTGTGTAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR CCA 90 bp | TGTGGGCTGAAGGTGGTCTGGCTAAGGAGTACGTCCTTAGGCATTTaGGCAGTCTCATTTGTCATCATGGGAACCAAGGGACCTCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: CGLKVVWLRSTSLGI*AVSFVIMGTKGPQA Trigger: TGCCTGAGGTCCCTTGGTTCCCATGATGACAAATGAGACTGCCCAAATGCCTAAGGACGTACTCCTTAGCCAGACCACCTTCAGCCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | GGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATTGGGCATaGTCAGATGCAGCCATGGCACGCAACCTGTCTCTCAAAAGGATT | + |
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Preference number: 1 (lower is better) Translates to: GQSMSGDQSCLKYWA*SDAAMARNLSLKRI Trigger: AATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR TCA 90 bp | TGCAAGAAAATAAGACTAGTGCCTCGGGCTGGGTTCCCTAAAGTGTaGGCACCCCCAAGATCCACTCACAACTCTGCAATGCATTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CKKIRLVPRAGFPKV*APPRSTHNSAMHWQ Trigger: CTGCCAATGCATTGCAGAGTTGTGAGTGGATCTTGGGGGTGCTCACACTTTAGGGAACCCAGCCCGAGGCACTAGTCTTATTTTCTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | GCTGTGGGTTTTTACCCTTTTTCCTGTCTAGGACCTGTGGTCAGCTaGCTGAACGAGGAGGACAGAACTCTGGAGCAGTATGAGAACAAG | + |
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Preference number: 1 (lower is better) Translates to: AVGFYPFSCLGPVVS*LNEEDRTLEQYENK Trigger: CTTGTTCTCATACTGCTCCAGAGTTCTGTCCTCCTCGTTCAGGCAGCTGACCACAGGTCCTAGACAGGAAAAAGGGTAAAAACCCACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CCA 90 bp | GTGATCAGAGCTGCCTCAAATATTGGGCATGCTCAGATGCAGCCATaGCACGCAACCTGTCTCTCAAAAGGATTATCCCTGTGTGCTATG | + |
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Preference number: 1 (lower is better) Translates to: VIRAASNIGHAQMQP*HATCLSKGLSLCAM Trigger: CATAGCACACAGGGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR TCA 90 bp | TCCATAAGTACTCAGGAAGGAGCGAGAGCCTTTGTACTTTTCACCTaGTCACCAAGCAGTGAAGCCATGGTTACCAGCACGGGAGACAAT | + |
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Preference number: 1 (lower is better) Translates to: SISTQEGARAFVLFT*SPSSEAMVTSTGDN Trigger: ATTGTCTCCCGTGCTGGTAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTCCTTCCTGAGTACTTATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR TCA 90 bp | GCTGCCTTGAGGGTGCACAGTTTGAGAAACACCAGCTTGAGGGCTTaGATGCTTGGCATAATTATTGTTATAGTGAGGCATCCCACCACA | + |
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Preference number: 1 (lower is better) Translates to: AALRVHSLRNTSLRA*MLGIIIVIVRHPTT Trigger: TGTGGTGGGATGCCTCACTATAACAATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGTGTTTCTCAAACTGTGCACCCTCAAGGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR TCA 90 bp | TATTCTGTGTTACAAGAACCAGAGAACAGTGCTAAACCCAAAGTATaGAACTGGCCCTGGGTCAACAGTGTGGAGAGCCTGTGTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: YSVLQEPENSAKPKV*NWPWVNSVESLCAE Trigger: TTCAGCACACAGGCTCTCCACACTGTTGACCCAGGGCCAGTTTCATACTTTGGGTTTAGCACTGTTCTCTGGTTCTTGTAACACAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | CATGTTCATCTCTGTTGCAGAAAGCTGGTGGACATGACTCGATGCTaGCGGGCTTATAAACTAACAAATCATTTCCCCCTTCAACAATAC | + |
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Preference number: 1 (lower is better) Translates to: HVHLCCRKLVDMTRC*RAYKLTNHFPLQQY Trigger: GTATTGTTGAAGGGGGAAATGATTTGTTAGTTTATAAGCCCGGCAGCATCGAGTCATGTCCACCAGCTTTCTGCAACAGAGATGAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | GTACATGTTCATCTCTGTTGCAGAAAGCTGGTGGACATGACTCGATaGTGCCGGGCTTATAAACTAACAAATCATTTCCCCCTTCAACAA | + |
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Preference number: 1 (lower is better) Translates to: VHVHLCCRKLVDMTR*CRAYKLTNHFPLQQ Trigger: TTGTTGAAGGGGGAAATGATTTGTTAGTTTATAAGCCCGGCAGCATCGAGTCATGTCCACCAGCTTTCTGCAACAGAGATGAACATGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CCA 90 bp | TGTGCTGTTGAGTGCTACTTAACATCTGTGATACAGGTAATGTTTTaGCTGCCAGTTATTCTGAACGAGAGCGAGAACAGTCCACTCTAC | + |
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Preference number: 1 (lower is better) Translates to: CAVECYLTSVIQVMF*LPVILNESENSPLY Trigger: GTAGAGTGGACTGTTCTCGCTCTCGTTCAGAATAACTGGCAGCCAAAACATTACCTGTATCACAGATGTTAAGTAGCACTCAACAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR GCA 90 bp | GTCCTTTGTATCCCTGGTCTTGCCAAGACTTTAATCATGAAGGTGTaGTGGGTTTTGTCAAAGGCTTTCTCAGCATCTAATGAGATGATC | + |
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Preference number: 1 (lower is better) Translates to: VLCIPGLAKTLIMKV*WVLSKAFSASNEMI Trigger: GATCATCTCATTAGATGCTGAGAAAGCCTTTGACAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAGACCAGGGATACAAAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR TCA 90 bp | TCACTAGTAGGAGATCTCATTTCTTTATGGAGGCCCTTAGTGCTTTaGACTGTCCTCTTAGCACTGCTTTCATTATGTCCCATAGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: SLVGDLISLWRPLVL*TVLLALLSLCPIGL Trigger: TAAACCTATGGGACATAATGAAAGCAGTGCTAAGAGGACAGTTCAAAGCACTAAGGGCCTCCATAAAGAAATGAGATCTCCTACTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR TCA 90 bp | ATGAACTTGGCAGTGTTCTTTCTACTCCTAGTTTATGGAATAATTTaGAGAGTATTGGTGTTAACTCTCCTTCAAAAGTCGGGTAGAACT | + |
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Preference number: 1 (lower is better) Translates to: MNLAVFFLLLVYGII*RVLVLTLLQKSGRT Trigger: AGTTCTACCCGACTTTTGAAGGAGAGTTAACACCAATACTCTTCAAATTATTCCATAAACTAGGAGTAGAAAGAACACTGCCAAGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR CCA 90 bp | AATTCTTCTACCTCCCAAACAAATCCACTAACATATCTGAGAACATaGATTTCTTATATGCAGAATACTAGTGACCTCTATTTCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: NSSTSQTNPLTYLRT*ISYMQNTSDLYFTC Trigger: GCAGGTGAAATAGAGGTCACTAGTATTCTGCATATAAGAAATCCATGTTCTCAGATATGTTAGTGGATTTGTTTGGGAGGTAGAAGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGATGGGTGTGGGCGGATaGTGGGTGTGGCTGCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGMGVGG*WVWLRA Trigger: AGCCCGCAGCCACACCCAGCATCCGCCCACACCCAT...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTGGAGAAGCAATGGGTGTGGGCGGATaGTGGGTGTGGCTGCGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RRTVGRAGQDGGTKSGEAMGVGG*WVWLRA Trigger: AGCCCGCAGCCACACCCAGCATCCGCCCACACCCAT...TGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| 3UTR-3UTR GCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGTTGGGCATGCTCAGATaGAGCCATGGCACGCAACCT | + |
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Preference number: 2 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGLGMLR*SHGTQP Trigger: AGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAA...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR TCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGGAGAAGCCACAACAATaGGGAGACGGGAGGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGEKPQQ*GDGRRT Trigger: AGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTC...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CAA 90 bp | CTCCCCTTAGGAGGGACTGGCGAGAGGATGGGCAACTCTGCCCTCTaGCCTGGGTCACATGGGACAGGCATAATGGGACAAAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LPLGGTGERMGNSAL*PGSHGTGIMGQKGK Trigger: TTTTCCCTTTTGTCCCATTATGCCTGTCCCATGTGACCCAGGCAAGAGGGCAGAGTTGCCCATCCTCTCGCCAGTCCCTCCTAAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGTGGGGCCGGAAGAGGCCACTACAATGGGTCTTGGTGAACTGTGTCCAGGTGGTTCTCAGAGTCTaGTCCCACACATCGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VRWGRKRPLQWVLVNCVQVVLRV*SHTSFP Trigger: TGGGAACGATGTGTGGGAGCAGACTCTGAGAACCAC...CTGGACACAGTTCACCAAGACCCATTGTAGTGGCCTCTTCCGGCCCCACCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGCCTCCTCTGTTAGCTTCTACTCACCCCCAGATGAGAAATCTGTGCTCGGACTGGCGAGAGGATaGGCAACTCTGCCCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: VWASSVSFYSPPDEKSVLGLARG*ATLPSC Trigger: GCAAGAGGGCAGAGTTGCCCATCCTCTCGCCAGTCC...GAGCACAGATTTCTCATCTGGGGGTGAGTAGAAGCTAACAGAGGAGGCCCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR CAA 90 bp | GTGTGGGCTGAAGGTGGTCTGGCTAAGGAGTACGTCCTTAGGCATTaGGGCAGTCTCATTTGTCATCATGGGAACCAAGGGACCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VWAEGGLAKEYVLRH*GSLICHHGNQGTSG Trigger: GCCTGAGGTCCCTTGGTTCCCATGATGACAAATGAGACTGCCCAAATGCCTAAGGACGTACTCCTTAGCCAGACCACCTTCAGCCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCCTCGGCGAAGGCCTACTATGCTTGAGTCTACTAATTTAGCAGAAAAGCCTGCCGTCCCCAGCTaGGGCAAGAGGGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: GFPRRRPTMLESTNLAEKPAVPS*GKRGHT Trigger: TGTGTGTCCCCTCTTGCCTCAGCTGGGGACGGCAGG...CTTTTCTGCTAAATTAGTAGACTCAAGCATAGTAGGCCTTCGCCGAGGGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCGGCTGTGGGTTTTTACCCTTTTTCCTGTCTAGGACCTGTGGTCAGCTGTTGGGCATGCTCAGATaGAGCCATGGCACGCAACCT | + |
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Preference number: 2 (lower is better) Translates to: RGGCGFLPFFLSRTCGQLLGMLR*SHGTQP Trigger: AGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAA...CAGCTGACCACAGGTCCTAGACAGGAAAAAGGGTAAAAACCCACAGCCGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGAGAAATCTGTGCTCAGTGAGTATTTGGATCTGAGACTTTCAACCAGGCCTGCCGTCCCCAGCTaGGGCAAGAGGGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: PDEKSVLSEYLDLRLSTRPAVPS*GKRGHT Trigger: TGTGTGTCCCCTCTTGCCTCAGCTGGGGACGGCAGG...CCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR TCA 90 bp | CTACCCTACCTGGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATACCAGCTTGAGGGCTTaGATGCTTGGCATAATTATT | + |
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Preference number: 2 (lower is better) Translates to: LPYLALIPHPGNQSPSEDTSLRA*MLGIII Trigger: AATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGT...ATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGGCCTCCTCTGTTAGCTTCTACTCACCCCCAGATGAGAAATCTGTGCTCTCGGGTGATCAGAGCTaGCTCAAATATTGGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: VWASSVSFYSPPDEKSVLSGDQS*LKYWAC Trigger: GCATGCCCAATATTTGAGGCAGCTCTGATCACCCGA...GAGCACAGATTTCTCATCTGGGGGTGAGTAGAAGCTAACAGAGGAGGCCCAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGTCAACAGTGTGGAGAGCCTGTGTGCTGAAGGGAAACTCGGTTTCCCTCAACTGTGATGCCAGATaGCAAGAGGGAAACAAACCA | + |
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Preference number: 2 (lower is better) Translates to: PGSTVWRACVLKGNSVSLNCDAR*QEGNKP Trigger: TGGTTTGTTTCCCTCTTGGCATCTGGCATCACAGTT...GAGGGAAACCGAGTTTCCCTTCAGCACACAGGCTCTCCACACTGTTGACCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCCCTCGGCGAAGGCCTACTATGCTTGAGTCTACTAATTTAGCAGAAAAGCTGTGGTCAGCTGCCTaGACGAGGAGGACAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: GFPRRRPTMLESTNLAEKLWSAA*TRRTEL Trigger: GAGTTCTGTCCTCCTCGTTCAGGCAGCTGACCACAG...CTTTTCTGCTAAATTAGTAGACTCAAGCATAGTAGGCCTTCGCCGAGGGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGGCCTCCTCTGTTAGCTTCTACTCACCCCCAGATGAGAAATCTGTGCTCCTTCTTCTAAAAAGATaGAGACAGCGTGAGCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: VWASSVSFYSPPDEKSVLLLLKR*RQRERS Trigger: GCTCCGCTCACGCTGTCTGCATCTTTTTAGAAGAAG...GAGCACAGATTTCTCATCTGGGGGTGAGTAGAAGCTAACAGAGGAGGCCCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR CCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTAGGGAATCGCTCCACATaGGAGCAGGATGGAGTACCA | + |
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Preference number: 2 (lower is better) Translates to: EREPLYFSPDHQAVKPWLGNRST*EQDGVP Trigger: TGGTACTCCATCCTGCTCCCATGTGGAGCGATTCCC...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCGGCTGTGGGTTTTTACCCTTTTTCCTGTCTAGGACCTGTGGTCAGCTGAACTGTGATGCCAGATaGCAAGAGGGAAACAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: RGGCGFLPFFLSRTCGQLNCDAR*QEGNKP Trigger: TGGTTTGTTTCCCTCTTGGCATCTGGCATCACAGTT...CAGCTGACCACAGGTCCTAGACAGGAAAAAGGGTAAAAACCCACAGCCGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGTCTTTTAGTATTACCAGCAATTCACTGCGTTTTAGAGGACAACTTTCTGAGAGAGCGGTCACCGTaGGCGCGCGCGCCTCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: LSLLVLPAIHCVLEDNFLRERSP*ARAPHL Trigger: TAGGTGAGGCGCGCGCGCGCACGGTGACCGCTCTCT...CAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTACACCTCCAGTCTCTCTaGGAACTTGGCTCTTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: EREPLYFSPDHQAVKPWLHLQSL*ELGSST Trigger: TGTGGAAGAGCCAAGTTCCCAGAGAGACTGGAGGTG...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGTTGTCCCCAGTTCCGTaGTTCTCAGAGTCTGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SISDVEVCFFCAAERWISLSPVP*FSESAP Trigger: GGGAGCAGACTCTGAGAACCACGGAACTGGGGACAA...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGAGAAATCTGTGCTCAGTGAGTATTTGGATCTGAGACTTTCAACCAGGGGGAATCGCTCCACATaGGAGCAGGATGGAGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: PDEKSVLSEYLDLRLSTRGNRST*EQDGVP Trigger: TGGTACTCCATCCTGCTCCCATGTGGAGCGATTCCC...CCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 90 bp | TGCTGCCTTGAGGGTGCACAGTTTGAGAAACACCAGCTTGAGGGCTaGAATGCTTGGCATAATTATTGTTATAGTGAGGCATCCCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: CCLEGAQFEKHQLEG*NAWHNYCYSEASHH Trigger: GTGGTGGGATGCCTCACTATAACAATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGTGTTTCTCAAACTGTGCACCCTCAAGGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTAATCCATGGTAGTCTAATAAAATACATGTTGTATCTGTTGAGGCTTGCTCTGCCTAAGCAGAGGTaGGGTGGGGCCGGAAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ALIHGSLIKYMLYLLRLALPKQR*GGAGRG Trigger: GCCTCTTCCGGCCCCACCTCACCTCTGCTTAGGCAG...AGCAAGCCTCAACAGATACAACATGTATTTTATTAGACTACCATGGATTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGGCAACTCTGCCCTCTTaGCTGGGTCACATGGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: KRVGFLTCTHSANSTSNKATLPS*LGHMGQ Trigger: CTGTCCCATGTGACCCAGGCAAGAGGGCAGAGTTGC...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTAATCCATGGTAGTCTAATAAAATACATGTTGTATCTGTTGAGGCTTGCTCTCTCAGAGCCCACATaGTCACGCTGCCCCCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALIHGSLIKYMLYLLRLALSEPT*SRCPQP Trigger: TGGCTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAG...AGCAAGCCTCAACAGATACAACATGTATTTTATTAGACTACCATGGATTAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGAAGAGGCCACTACAATaGGTCTTGGTGAACTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SISDVEVCFFCAAERWISKRPLQ*VLVNCV Trigger: GACACAGTTCACCAAGACCCATTGTAGTGGCCTCTT...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTACCACATCTAATCCAATaGAGAAAAATCCATTCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: EREPLYFSPDHQAVKPWLPHLIQ*RKIHSG Trigger: CCCGGAATGGATTTTTCTTCATTGGATTAGATGTGG...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTAACAGAGCTACAAAGGTaGTCATTTCTTGTGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: EREPLYFSPDHQAVKPWLTELQR*SFLVTW Trigger: CCATGTCACAAGAAATGACCACCTTTGTAGCTCTGT...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTATCGTTCCCAGTCACGTaGCTCTCAGAGCCCACATGC | + |
|
Preference number: 2 (lower is better) Translates to: FISCRSSLLNFEGHVCILSFPVT*LSEPTC Trigger: GCATGTGGGCTCTGAGAGCCACGTGACTGGGAACGA...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTATCCCTGGTCTTGCCAAGACTTTAATCATGAAGGTGTGCTGGGTTTTGCCTGTTGATTTGATGTaGTCTCTGCCTAAGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LCIPGLAKTLIMKVCWVLPVDLM*SLPKQR Trigger: CCTCTGCTTAGGCAGAGACCACATCAAATCAACAGG...CAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAGACCAGGGATACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | ATCCCTGGTCTTGCCAAGACTTTAATCATGAAGGTGTGCTGGGTTTaGTCAAAGGCTTTCTCAGCATCTAATGAGATGATCATGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IPGLAKTLIMKVCWV*SKAFSASNEMIMWA Trigger: AGCCCACATGATCATCTCATTAGATGCTGAGAAAGCCTTTGACAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAGACCAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGGACATTAATGACAAATaGTGTAGCAAGGGGTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SISDVEVCFFCAAERWISDINDK*CSKGSL Trigger: GAGAGACCCCTTGCTACATCATTTGTCATTAATGTC...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTAATCCATGGTAGTCTAATAAAATACATGTTGTATCTGTTGAGGCTTGCTCCCACATGCTCACGCTaGCCCCAGCCATGTTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ALIHGSLIKYMLYLLRLAPTCSR*PQPCCS Trigger: AGAACAACATGGCTGGGGGCAGCGTGAGCATGTGGG...AGCAAGCCTCAACAGATACAACATGTATTTTATTAGACTACCATGGATTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | AATCTTTCCCTGCCCTTTACTCTGAGACAATGTCTATCTCTGATGTaGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NLSLPFTLRQCLSLM*RCVSSVQQNDGSRF Trigger: AAAACGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGACATTGTCTCAGAGTAAAGGGCAGGGAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTATCCCTGGTCTTGCCAAGACTTTAATCATGAAGGTGTGCTGGGTTTTGATTCTTTCTCTTGTGTaGTTTAGGAACCAGGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LCIPGLAKTLIMKVCWVLILSLV*FRNQGD Trigger: GTCACCCTGGTTCCTAAATCACACAAGAGAAAGAAT...CAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAGACCAGGGATACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTCTTTTAGTATTACCAGCAATTCACTGCGTTTTAGAGGACAACTTTCTGAGACCTGAGACTTGCTaGGGACAGCTCGATTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: LSLLVLPAIHCVLEDNFLRPETC*GQLDLS Trigger: GGATAAATCGAGCTGTCCTCAGCAAGTCTCAGGTCT...CAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTAATCCATGGTAGTCTAATAAAATACATGTTGTATCTGTTGAGGCTTGCTAGGGGTCTCTCCTGTTaGTTTGATGTGGTCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: ALIHGSLIKYMLYLLRLARGLSC*FDVVSA Trigger: GGCAGAGACCACATCAAATCAACAGGAGAGACCCCT...AGCAAGCCTCAACAGATACAACATGTATTTTATTAGACTACCATGGATTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGAGAGTTCACTGGTGTTaGGAGACATTAATGACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SISDVEVCFFCAAERWISRVHWC*ETLMTN Trigger: ATTTGTCATTAATGTCTCTCAACACCAGTGAACTCT...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATAGGAGGACAGAACTCTaGAGCAGTATGAGAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNRRTEL*SSMRTS Trigger: GCTTGTTCTCATACTGCTCCAGAGTTCTGTCCTCCT...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 90 bp | TGGTTGAAAGTCTATTGTGTTAGATATCAGAAGGGCTACACCAGCTaGCTTTTTGGAAAATCTTTCCCTGCCCTTTACTCTGAGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: WLKVYCVRYQKGYTS*LFGKSFPALYSETM Trigger: CATTGTCTCAGAGTAAAGGGCAGGGAAAGATTTTCCAAAAAGCAAGCTGGTGTAGCCCTTCTGATATCTAACACAATAGACTTTCAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTCTTTTAGTATTACCAGCAATTCACTGCGTTTTAGAGGACAACTTTCTGTCAGACCTGCGGTCCTaGGAGAGAAACATTGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LSLLVLPAIHCVLEDNFLSDLRS*ERNIVT Trigger: TGTTACAATGTTTCTCTCTCAGGACCGCAGGTCTGA...CAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATACATGTTGTATCTGTTaGGGCTTGCTTCCTGACCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLVLVLILVDLFNLLPFNTCCIC*GLLPDQ Trigger: TTGGTCAGGAAGCAAGCCTCAACAGATACAACATGT...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTAGGTGTGTTTCTTCTGTaGAGCAGAACGATGGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: FISCRSSLLNFEGHVCILGVFLL*SRTMDL Trigger: GAGATCCATCGTTCTGCTGCACAGAAGAAACACACC...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTATCCCTGGTCTTGCCAAGACTTTAATCATGAAGGTGTGCTGGGTTTTGTCTTTCTTGACCCAGTaGTTATTCCATAGAGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LCIPGLAKTLIMKVCWVLSFLTQ*LFHRVV Trigger: AACAACTCTATGGAATAACCACTGGGTCAAGAAAGA...CAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAGACCAGGGATACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | TCCATTATTCCTCTGTTTAACTTCTGTCTGGGTAAGAGTAGGGCATaGAAGCCTCCTACTCTTAACATGTGGAGTTCAATGTGTGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: SIIPLFNFCLGKSRA*KPPTLNMWSSMCDL Trigger: TAAATCACACATTGAACTCCACATGTTAAGAGTAGGAGGCTTCAATGCCCTACTCTTACCCAGACAGAAGTTAAACAGAGGAATAATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTAAAGTGTGGCCAATCTTaGAGAAGGTTCAGTGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FISCRSSLLNFEGHVCILKCGQS*RRFSEV Trigger: CACTTCACTGAACCTTCTCCAAGATTGGCCACACTT...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | ACTTCAAGTACTATACCGAATAGATATGGAGTGGACAGTCTTGTCTaGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: TSSTIPNRYGVDSLV*VLILVDLFNLLPFN Trigger: ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACTGTCCACTCCATATCTATTCGGTATAGTACTTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | CCAACCGCTTCACTGAAGATGTTTATCAGCTGTAGGAGTTCCCTGTaGAATTTTGAGGGTCACGTATGTATATTATCATATCATTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PTASLKMFISCRSSL*NFEGHVCILSYHLQ Trigger: TTGCAAATGATATGATAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAACATCTTCAGTGAAGCGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATCAGCATCTAATGAGATaGTCATGTGGGCTTTTACTT | + |
|
Preference number: 2 (lower is better) Translates to: SLVLVLILVDLFNLLPFNQHLMR*SCGLLL Trigger: AAGTAAAAGCCCACATGATCATCTCATTAGATGCTG...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTAAAAACCATCTGGCCTTaGGCTCTTTTGTTGTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: FISCRSSLLNFEGHVCILKTIWP*ALLLLL Trigger: CAACAACAACAAAAGAGCCCAAGGCCAGATGGTTTT...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | TTTAATCTGATCTGGGATACTGGCTTGCTGTATATTGTCTTTATTTaGTTTAGGTGTGTCCTTTGTATCCCTGGTCTTGCCAAGACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: FNLIWDTGLLYIVFI*FRCVLCIPGLAKTL Trigger: TAAAGTCTTGGCAAGACCAGGGATACAAAGGACACACCTAAACAAAATAAAGACAATATACAGCAAGCCAGTATCCCAGATCAGATTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | GACCTGTTTAATCTTCTCCCGTTTAATCTGATCTGGGATACTGGCTaGCTGTATATTGTCTTTATTTTGTTTAGGTGTGTCCTTTGTATC | + |
|
Preference number: 2 (lower is better) Translates to: DLFNLLPFNLIWDTG*LYIVFILFRCVLCI Trigger: GATACAAAGGACACACCTAAACAAAATAAAGACAATATACAGCAAGCCAGTATCCCAGATCAGATTAAACGGGAGAAGATTAAACAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 90 bp | GGGTCACGTATGTATATTATCATATCATTTGCAAATAACAATACTTaGACATCTCCCTTTCCAATCTGTATCCCCTTGGTCTCCTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GSRMYIIISFANNNT*TSPFPICIPLVSFS Trigger: ACTGAAGGAGACCAAGGGGATACAGATTGGAAAGGGAGATGTCAAAGTATTGTTATTTGCAAATGATATGATAATATACATACGTGACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATATACAGGTAATGTTTTaGCTGCCAGTTATTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNIQVMF*LPVILN Trigger: GTTCAGAATAACTGGCAGCCAAAACATTACCTGTAT...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 90 bp | TTCTGTGATTGGGTGAAACGTTCTGTAGGTATCTGTCAGATCCATTaGAGTCATAATGTCTGTAATTCCATTATTCCTCTGTTTAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: FCDWVKRSVGICQIH*SHNVCNSIIPLFNF Trigger: GAAGTTAAACAGAGGAATAATGGAATTACAGACATTATGACTCAAATGGATCTGACAGATACCTACAGAACGTTTCACCCAATCACAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGGAACAAGCGAAGCAATaGAGAAAACAGATTTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KRVGFLTCTHSANSTSNKEQAKQ*RKQIFF Trigger: AAAGAAAATCTGTTTTCTGCATTGCTTCGCTTGTTC...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATAGATCAACAGCAATGTaGTTCCTGCAAATAAATATG | + |
|
Preference number: 2 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNRSTAM*FLQINM Trigger: CATATTTATTTGCAGGAAGCACATTGCTGTTGATCT...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATAATGAGATGATCATGTaGGCTTTTACTTCAAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLVLVLILVDLFNLLPFNNEMIM*AFTSSL Trigger: CAAACTTGAAGTAAAAGCCCACATGATCATCTCATT...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | TTGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTaGATGGGTGTGGGCGGATGCTGGGTGTGGCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LQKKWRWAADGG*MGVGGCWVWLR Trigger: CCGCAGCCACACCCAGCATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | AAGCCTCCCAGGGAATCGCTCCACATGGGAGCAGGATaGAGTACCAGCAGCCCTCGGACAGTCCATGTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: KPPRESLHMGAG*STSSPRTVHVG Trigger: CCCGACATGGACTGTCCGAGGGCTGCTGGTACTCCATCCTGCTCCCATGTGGAGCGATTCCCTGGGAGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | CTCAGAGTCTGCTCCCACACATCGTTCCCAGTCACGTaGCTCTCAGAGCCCACATGCTCACGCTGCCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRVCSHTSFPVT*LSEPTCSRCPQ Trigger: CTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAGCCACGTGACTGGGAACGATGTGTGGGAGCAGACTCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | CTGGCCCTGGGTCAACAGTGTGGAGAGCCTGTGTGCTaGAGGGAAACTCGGTTTCCCTCGGCGAAGGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LALGQQCGEPVC*RETRFPSAKAY Trigger: GTAGGCCTTCGCCGAGGGAAACCGAGTTTCCCTTCAGCACACAGGCTCTCCACACTGTTGACCCAGGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | GCAGAGGTGAGGTGGGGCCGGAAGAGGCCACTACAATaGGTCTTGGTGAACTGTGTCCAGGGAGTAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AEVRWGRKRPLQ*VLVNCVQGVGQ Trigger: CTGCCCTACTCCCTGGACACAGTTCACCAAGACCCATTGTAGTGGCCTCTTCCGGCCCCACCTCACCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR GCA 72 bp | CCAGTCACGTGGCTCTCAGAGCCCACATGCTCACGCTaGCCCCAGCCATGTTGTTCTCAGAGTCAGTTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVTWLSEPTCSR*PQPCCSQSQFA Trigger: TGCGAACTGACTCTGAGAACAACATGGCTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAGCCACGTGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | CTGCACACACTGGCTGGGGTCCTTTCCTACCCTACCTaGCTCTCATTCCTCACCCCGGGAACCAATCGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHTLAGVLSYPT*LSFLTPGTNRL Trigger: AAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAGGAAAGGACCCCAGCCAGTGTGTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | TTCTGTAAACTTGCAAAAGAAGTGGCGGTGGGCTGCTaGTGGGGGCTGGATGGGTGTGGGCGGATGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FCKLAKEVAVGC*WGLDGCGRMLG Trigger: ACCCAGCATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCAAGTTTACAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR GCA 72 bp | ACATCGTTCCCAGTCACGTGGCTCTCAGAGCCCACATaGTCACGCTGCCCCCAGCCATGTTGTTCTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSFPVTWLSEPT*SRCPQPCCSQS Trigger: ACTCTGAGAACAACATGGCTGGGGGCAGCGTGAGCATGTGGGCTCTGAGAGCCACGTGACTGGGAACGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | GACTGGCGAGAGGATGGGCAACTCTGCCCTCTTGCCTaGGTCACATGGGACAGGCATAATGGGACAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DWREDGQLCPLA*VTWDRHNGTKG Trigger: CCCTTTTGTCCCATTATGCCTGTCCCATGTGACCCAGGCAAGAGGGCAGAGTTGCCCATCCTCTCGCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | CATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATaGGCTGACCGGAGAAAGCTTAGAGTGGTACCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSSPREPIAFRG*ADRRKLRVVPK Trigger: CTTGGGTACCACTCTAAGCTTTCTCCGGTCAGCCCATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCTACCTGGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATGAGCTGCCTCAAATATaGGGCATGCTCAGATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPYLALIPHPGNQSPSEDELPQI*GMLRCS Trigger: GCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTC...ATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR GCA 72 bp | GCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTaGCTCAAATATTGGGCATGCTCAGATGCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: AALGQSMSGDQS*LKYWACSDAAM Trigger: CATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | AGACGGGAGGAGAACTGTGGGAAGGGCTGGACAAGATaGCGGCACGAAATCTGGAGAAGCAGAAATCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: RREENCGKGWTR*RHEIWRSRNPR Trigger: CCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCTCCCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR TCA 72 bp | TGGAGTACCAGCAGCCCTCGGACAGTCCATGTCGGGTaGTCAGAGCTGCCTCAAATATTGGGCATGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WSTSSPRTVHVG*SELPQILGMLR Trigger: TCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR GCA 72 bp | AGCATGGTGGCAGGTACTTTGATGCCTAACCCTGTCTaGGGGGACTTCAGTGTGGTAAGGGACATCTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: SMVAGTLMPNPV*GDFSVVRDISA Trigger: CGCAGAGATGTCCCTTACCACACTGAAGTCCCCGCAGACAGGGTTAGGCATCAAAGTACCTGCCACCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | ACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTaGACAAGATGGCGGCACGAAATCTGGAGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TMRRREENCGKG*TRWRHEIWRSR Trigger: TCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | AGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTaGGAAGGGCTGGACAAGATGGCGGCACGAAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSHNNEETGGEL*EGLDKMAARNL Trigger: CAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | CCCCTTCAACAATACGGGTGTGGGCTGAAGGTGGTCTaGCTAAGGAGTACGTCCTTAGGCATTTGGGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLQQYGCGLKVV*LRSTSLGIWAV Trigger: GACTGCCCAAATGCCTAAGGACGTACTCCTTAGCCAGACCACCTTCAGCCCACACCCGTATTGTTGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | CACAGGTCTCACCTGGAGGCTAGACCTGAGACTTGCTaGGGACAGCTCGATTTATCCACTGAGTCTGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HRSHLEARPETC*GQLDLSTESGE Trigger: CTCACCAGACTCAGTGGATAAATCGAGCTGTCCTCAGCAAGTCTCAGGTCTAGCCTCCAGGTGAGACCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | GGGACTGAATTCTACCCCACCATGGACACGGTCCCCTaGAAACTCAGCAGTGCCTTCAGGACCGCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: GTEFYPTMDTVP*KLSSAFRTAFT Trigger: TGTAAATGCGGTCCTGAAGGCACTGCTGAGTTTTCAGGGGACCGTGTCCATGGTGGGGTAGAATTCAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR GCA 72 bp | ATGTCGGGTGATCAGAGCTGCCTCAAATATTGGGCATaGTCAGATGCAGCCATGGCACGCAACCTGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: MSGDQSCLKYWA*SDAAMARNLSL Trigger: GAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR GCA 72 bp | AGAAATGTTGTCCCCAGTTCCGTGGTTCTCAGAGTCTaGTCCCACACATCGTTCCCAGTCACGTGGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RNVVPSSVVLRV*SHTSFPVTWLS Trigger: TGAGAGCCACGTGACTGGGAACGATGTGTGGGAGCAGACTCTGAGAACCACGGAACTGGGGACAACATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | TGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTaGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CGKGWTRWRHEI*RSRNPRSQSVG Trigger: ACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | AGAGTGGTACCCAAGCTTGAAATCACAGGTCTCACCTaGAGGCTAGACCTGAGACTTGCTGAGGACAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RVVPKLEITGLT*RLDLRLAEDSS Trigger: CGAGCTGTCCTCAGCAAGTCTCAGGTCTAGCCTCCAGGTGAGACCTGTGATTTCAAGCTTGGGTACCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | CAGGCAAGGAGGGGAGCCCTAAGAACTCCTCTTCTTTaGCCACCACCTACACTCAGGGTTTTGAACTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QARRGALRTPLL*PPPTLRVLNLA Trigger: GGCTAAGTTCAAAACCCTGAGTGTAGGTGGTGGTCAAAGAAGAGGAGTTCTTAGGGCTCCCCTCCTTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | ATAAGACTAGTGCCTCGGGCTGGGTTCCCTAAAGTGTaGGCACCCCCAAGATCCACTCACAACTCTGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: IRLVPRAGFPKV*APPRSTHNSAM Trigger: CATTGCAGAGTTGTGAGTGGATCTTGGGGGTGCTCACACTTTAGGGAACCCAGCCCGAGGCACTAGTCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | CAAACAGAGCTACAAAGGTGGTCATTTCTTGTGACATaGGAGGCGTTAGGGCAAAGGGTAGAGGCGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QTELQRWSFLVT*EALGQRVEAAV Trigger: CACAGCCGCCTCTACCCTTTGCCCTAACGCCTCCCATGTCACAAGAAATGACCACCTTTGTAGCTCTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | AACCCAAAGTATGAAACTGGCCCTGGGTCAACAGTGTaGAGAGCCTGTGTGCTGAAGGGAAACTCGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NPKYETGPGSTV*RACVLKGNSVS Trigger: GGAAACCGAGTTTCCCTTCAGCACACAGGCTCTCCACACTGTTGACCCAGGGCCAGTTTCATACTTTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | TTCCAACATACCCCACCTCCAGTCTCTCTGGGAACTTaGCTCTTCCACAGTCCTGTCACTCCATTACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FQHTPPPVSLGT*LFHSPVTPLQL Trigger: GAGCTGTAATGGAGTGACAGGACTGTGGAAGAGCCAAGTTCCCAGAGAGACTGGAGGTGGGGTATGTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | CCTAGTGATTCCAACATACCCCACCTCCAGTCTCTCTaGGAACTTGGCTCTTCCACAGTCCTGTCACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSDSNIPHLQSL*ELGSSTVLSLH Trigger: ATGGAGTGACAGGACTGTGGAAGAGCCAAGTTCCCAGAGAGACTGGAGGTGGGGTATGTTGGAATCACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | ACTCAGGAAGGAGCGAGAGCCTTTGTACTTTTCACCTaGTCACCAAGCAGTGAAGCCATGGTTACCAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: TQEGARAFVLFT*SPSSEAMVTST Trigger: CGTGCTGGTAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTCCTTCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | GGGCAGTTTAGCTGTCAGAGGCTCCCTCACCTGTCCTaGCTACACTACTTACACAGAAATGTTGTCCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GQFSCQRLPHLS*LHYLHRNVVPS Trigger: ACTGGGGACAACATTTCTGTGTAAGTAGTGTAGTCAGGACAGGTGAGGGAGCCTCTGACAGCTAAACTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | GCTGCCTCAAATATTGGGCATGCTCAGATGCAGCCATaGCACGCAACCTGTCTCTCAAAAGGATTATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AASNIGHAQMQP*HATCLSKGLSL Trigger: CAGGGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCCAATATTTGAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CCA 72 bp | TCTTCAAGCCTGTGTACAGATAGGCCCGGTGCTTTGTaGTTCTTCCTCGGGAAAGTCCTAAAACACCTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSLCTDRPGAL*FFLGKVLKHLR Trigger: ACGCAGGTGTTTTAGGACTTTCCCGAGGAAGAACCACAAAGCACCGGGCCTATCTGTACACAGGCTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR GCA 72 bp | TTTGGATCTGAGACTTTCAACCAGGATACAACTGGCTaGAATTCAGGCCTTTTGCAGAGAGCGGTCACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGSETFNQDTTG*NSGLLQRAVTV Trigger: CACGGTGACCGCTCTCTGCAAAAGGCCTGAATTGCAGCCAGTTGTATCCTGGTTGAAAGTCTCAGATCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | AAGGTGGTCTGGCTAAGGAGTACGTCCTTAGGCATTTaGGCAGTCTCATTTGTCATCATGGGAACCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KVVWLRSTSLGI*AVSFVIMGTKG Trigger: TCCCTTGGTTCCCATGATGACAAATGAGACTGCCCAAATGCCTAAGGACGTACTCCTTAGCCAGACCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | TACACTACTTACACAGAAATGTTGTCCCCAGTTCCGTaGTTCTCAGAGTCTGCTCCCACACATCGTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YTTYTEMLSPVP*FSESAPTHRSQ Trigger: CTGGGAACGATGTGTGGGAGCAGACTCTGAGAACCACGGAACTGGGGACAACATTTCTGTGTAAGTAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | TGGGCATCCACAGATATCCCCATCATTACGGCATGCTaGGCTGCCATCTCTGAAACAGTTTTCAGTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WASTDIPIITAC*AAISETVFSLL Trigger: AAGGAGACTGAAAACTGTTTCAGAGATGGCAGCTCAGCATGCCGTAATGATGGGGATATCTGTGGATGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | TTACAAGAACCAGAGAACAGTGCTAAACCCAAAGTATaGAACTGGCCCTGGGTCAACAGTGTGGAGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQEPENSAKPKV*NWPWVNSVESL Trigger: CAGGCTCTCCACACTGTTGACCCAGGGCCAGTTTCATACTTTGGGTTTAGCACTGTTCTCTGGTTCTTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | GTTGAGGCTTGCTTCCTGACCAAGTGTGGCCAATCTTaGAGAAGGTTCAGTGAAGTGCTGAGAAGAAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VEACFLTKCGQS*RRFSEVLRRRY Trigger: ATACCTTCTTCTCAGCACTTCACTGAACCTTCTCCAAGATTGGCCACACTTGGTCAGGAAGCAAGCCTCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTGTTAGATATCAGAAGGGCTACACCAGCTTGCTTTTTGGAAAATCTTTCCCTGCCCCCAGCCATGTaGTTCTCAGAGTCAGTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: IVLDIRRATPACFLENLSLPPAM*FSESVR Trigger: GCGAACTGACTCTGAGAACAACATGGCTGGGGGCAG...GGAAAGATTTTCCAAAAAGCAAGCTGGTGTAGCCCTTCTGATATCTAACACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | CTGCCTGAACGAGGAGGACAGAACTCTGGAGCAGTATaGGAACAAGCGAAGCAATGCAGAAAACAGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPERGGQNSGAV*EQAKQCRKQIF Trigger: GAAAATCTGTTTTCTGCATTGCTTCGCTTGTTCTCATACTGCTCCAGAGTTCTGTCCTCCTCGTTCAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | GTAACATTGCAAACTAAGAGTGCCTGGATGCTCCCTTaGATAGGCAGTACCATTCTCAAAGCCTCGCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VTLQTKSAWMLP*IGSTILKASLV Trigger: AACCAGCGAGGCTTTGAGAATGGTACTGCCTATTCAAGGGAGCATCCAGGCACTCTTAGTTTGCAATGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | TCAGGAGCTGGGTATCTAACAAGTGAAGACAACTGTTaGTCGTGTTTCCATAGTTCTGAGAGGGAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGAGYLTSEDNC*SCFHSSERERE Trigger: CTCTCTCTCCCTCTCAGAACTATGGAAACACGATCAACAGTTGTCTTCACTTGTTAGATACCCAGCTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTAGATACAGGTAATGTTTaGGCTGCCAGTTATTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EREPLYFSPDHQAVKPWLDTGNV*AASYSE Trigger: TTCAGAATAACTGGCAGCCAAAACATTACCTGTATC...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | CCTGACCAAGTGTGGCCAATCTTGGAGAAGGTTCAGTaGAGTGCTGAGAAGAAGGTATATTCTTCTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PDQVWPILEKVQ*SAEKKVYSSVI Trigger: AATCACAGAAGAATATACCTTCTTCTCAGCACTTCACTGAACCTTCTCCAAGATTGGCCACACTTGGTCAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | GGAGATCTCATTTCTTTATGGAGGCCCTTAGTGCTTTaGACTGTCCTCTTAGCACTGCTTTCATTATGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GDLISLWRPLVL*TVLLALLSLCP Trigger: GGGACATAATGAAAGCAGTGCTAAGAGGACAGTTCAAAGCACTAAGGGCCTCCATAAAGAAATGAGATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | CAGTTTGAGAAACACCAGCTTGAGGGCTTGAATGCTTaGCATAATTATTGTTATAGTGAGGCATCCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: QFEKHQLEGLNA*HNYCYSEASHH Trigger: GTGGTGGGATGCCTCACTATAACAATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGTGTTTCTCAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | AGGGCAGAAATGTTCAGAACTGAGACATCCTCTTGGTaGATTTTTCCTTTGAAGAGTATGAAGTGCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RAEMFRTETSSW*IFPLKSMKCPS Trigger: GGAAGGGCACTTCATACTCTTCAAAGGAAAAATCCACCAAGAGGATGTCTCAGTTCTGAACATTTCTGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATGAGGGAAACAAACCATaGTTCCTGAGATCTCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNEGNKP*FLRSPE Trigger: CTCCGGAGATCTCAGGAACAATGGTTTGTTTCCCTC...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCCCTCGGCGAAGGCCTACTATGCTTGAGTCTACTAATTTAGCAGAAAAGGATACAGGTAATGTTTaGGCTGCCAGTTATTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GFPRRRPTMLESTNLAEKDTGNV*AASYSE Trigger: TTCAGAATAACTGGCAGCCAAAACATTACCTGTATC...CTTTTCTGCTAAATTAGTAGACTCAAGCATAGTAGGCCTTCGCCGAGGGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | AGGGTGCACAGTTTGAGAAACACCAGCTTGAGGGCTTaGATGCTTGGCATAATTATTGTTATAGTGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RVHSLRNTSLRA*MLGIIIVIVRH Trigger: ATGCCTCACTATAACAATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGTGTTTCTCAAACTGTGCACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | CTTTCTGTTTCAGAAGGAGTCTCAGACCTGCGGTCCTaGGAGAGAAACATTGTAACATTGCAAACTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSVSEGVSDLRS*ERNIVTLQTKS Trigger: ACTCTTAGTTTGCAATGTTACAATGTTTCTCTCTCAGGACCGCAGGTCTGAGACTCCTTCTGAAACAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR TCA 72 bp | CTCTGTTTAACTTCTGTCTGGGTAAGAGTAGGGCATTaGAGCCTCCTACTCTTAACATGTGGAGTTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLTSVWVRVGH*SLLLLTCGVQC Trigger: ACATTGAACTCCACATGTTAAGAGTAGGAGGCTTCAATGCCCTACTCTTACCCAGACAGAAGTTAAACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | ATAAAATACATGTTGTATCTGTTGAGGCTTGCTTCCTaGCCAAGTGTGGCCAATCTTGGAGAAGGTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IKYMLYLLRLAS*PSVANLGEGSV Trigger: CACTGAACCTTCTCCAAGATTGGCCACACTTGGTCAGGAAGCAAGCCTCAACAGATACAACATGTATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR GCA 72 bp | AACGGGCAGGTTTTGTTACCTGTGGTTCACTTTGGATaGCCACCCGAAATCACTTACAAGGTTTTTACATTA | + |
|
Preference number: 3 (lower is better) Translates to: NGQVLLPVVHFG*PPEITYKVFTL Trigger: TAATGTAAAAACCTTGTAAGTGATTTCGGGTGGGCATCCAAAGTGAACCACAGGTAACAAAACCTGCCCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | GAGTGCTACTTAACATCTGTGATACAGGTAATGTTTTaGCTGCCAGTTATTCTGAACGAGAGCGAGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: ECYLTSVIQVMF*LPVILNESENS Trigger: ACTGTTCTCGCTCTCGTTCAGAATAACTGGCAGCCAAAACATTACCTGTATCACAGATGTTAAGTAGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | AGTCGGGTAGAACTCTGTTCTAAAACCATCTGGCCTTaGGCTCTTTTGTTGTTGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRVELCSKTIWP*ALLLLLLLLLL Trigger: CAACAACAACAACAACAACAACAACAAAAGAGCCCAAGGCCAGATGGTTTTAGAACAGAGTTCTACCCGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATTTTGGGCAGTCTCATTaGTCATCATGGGAACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNFGQSH*SSWEPR Trigger: CCTTGGTTCCCATGATGACAAATGAGACTGCCCAAA...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATACACCAGCTTGCTTTTaGGAAAATCTTTCCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLVLVLILVDLFNLLPFNTPACF*ENLSLP Trigger: GGGCAGGGAAAGATTTTCCAAAAAGCAAGCTGGTGT...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR GCA 72 bp | TTTACATACAAAGGAAGGATTCCTAAAGTGAGCCTCTaGTGCATAGATTCTTCAAGCCTGTGTACAGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTYKGRIPKVSL*CIDSSSLCTDR Trigger: CCTATCTGTACACAGGCTTGAAGAATCTATGCAGCAGAGGCTCACTTTAGGAATCCTTCCTTTGTATGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | TTTAGGGCAGAAATGTTCAGAACTGAGACATCCTCTTaGTGGATTTTTCCTTTGAAGAGTATGAAGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FRAEMFRTETSS*WIFPLKSMKCP Trigger: AGGGCACTTCATACTCTTCAAAGGAAAAATCCACCAAGAGGATGTCTCAGTTCTGAACATTTCTGCCCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATTGTCTATCTCTGATGTaGAGGTGTGTTTCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVLVLILVDLFNLLPFNCLSLM*RCVSSV Trigger: CACAGAAGAAACACACCTCAACATCAGAGATAGACA...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTATGGCCTTGGGCTCTTTaGTTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FISCRSSLLNFEGHVCILWPWAL*LLLLLL Trigger: CAACAACAACAACAACAACAAAAGAGCCCAAGGCCA...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR GCA 72 bp | ACACATCCCAGAGTTAGTGCGTTTTTGGATTCACTTTaGAAATGTAAAACTGAACTGTTACAGGATAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: THPRVSAFLDSL*KCKTELLQDKG Trigger: CCCCTTATCCTGTAACAGTTCAGTTTTACATTTGCAAAGTGAATCCAAAAACGCACTAACTCTGGGATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR GCA 72 bp | GAAGCCCTAAGTCTTTTAGTATTACCAGCAATTCACTaGGTTTTAGAGGACAACTTTCTGTTTCAGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EALSLLVLPAIH*VLEDNFLFQKE Trigger: CTCCTTCTGAAACAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAGGGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATTGTGTTAGATATCAGAAGGGCTACACCAGCTTGCTTTTTGGAAAATCTCAGAGTTCACTGGTGTaGAGAGACATTAATGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VYCVRYQKGYTSLLFGKSQSSLV*RDINDK Trigger: TTTGTCATTAATGTCTCTCAACACCAGTGAACTCTG...AGATTTTCCAAAAAGCAAGCTGGTGTAGCCCTTCTGATATCTAACACAATAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATTGCTTCTTTTTGGTTTaGAGCATTCAGGTGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLVLVLILVDLFNLLPFNCFFLV*SIQVNC Trigger: ACAGTTCACCTGAATGCTCAAAACCAAAAAGAAGCA...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATTGGATTTTTCATATGTaGAACTATCCCTGCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SLVLVLILVDLFNLLPFNWIFHM*NYPCCI Trigger: GATGCAGCAGGGATAGTTCAACATATGAAAAATCCA...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | GTGGACCTGTTTAATCTTCTCCCGTTTAATCTGATCTaGGATACTGGCTTGCTGTATATTGTCTTTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VDLFNLLPFNLI*DTGLLYIVFIL Trigger: CAAAATAAAGACAATATACAGCAAGCCAGTATCCCAGATCAGATTAAACGGGAGAAGATTAAACAGGTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTGTCTTGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTCCCGTTTAATCTTTTTGATGTGTTCTaGGATTTGGCTTGTGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SLVLVLILVDLFNLLPFNLFDVF*DLACEY Trigger: ATACTCACAAGCCAAATCCAAGAACACATCAAAAAG...ATTAAACGGGAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | GCAGTGTTCTTTCTACTCCTAGTTTATGGAATAATTTaGAGAGTATTGGTGTTAACTCTCCTTCAAAAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: AVFFLLLVYGII*RVLVLTLLQKS Trigger: CGACTTTTGAAGGAGAGTTAACACCAATACTCTTCAAATTATTCCATAAACTAGGAGTAGAAAGAACACTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR TCA 72 bp | GGGTTTTGTCAAAGGCTTTCTCAGCATCTAATGAGATaGTCATGTGGGCTTTTACTTCAAGTTTGTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: GFCQRLSQHLMR*SCGLLLQVCLY Trigger: ATATAAACAAACTTGAAGTAAAAGCCCACATGATCATCTCATTAGATGCTGAGAAAGCCTTTGACAAAACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CCA 72 bp | ACAGTGAATTACCACAGAAACTATGGAATTACTCAGTaGTACCTAACAAATGACAGTAAGATCCCTTATATT | + |
|
Preference number: 3 (lower is better) Translates to: TVNYHRNYGITQ*YLTNDSKIPYI Trigger: AATATAAGGGATCTTACTGTCATTTGTTAGGTACCACTGAGTAATTCCATAGTTTCTGTGGTAATTCACTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CCA 72 bp | AATGAACTTGGCAGTGTTCTTTCTACTCCTAGTTTATaGAATAATTTGAAGAGTATTGGTGTTAACTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NELGSVLSTPSL*NNLKSIGVNSP Trigger: AGGAGAGTTAACACCAATACTCTTCAAATTATTCCATAAACTAGGAGTAGAAAGAACACTGCCAAGTTCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | GGAGGGACTGGCGAGAGGATGGGCAACTCTGCCCTCTaGCCTGGGTCACATGGGACAGGCATAATGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGTGERMGNSAL*PGSHGTGIMGQ Trigger: TTGTCCCATTATGCCTGTCCCATGTGACCCAGGCAAGAGGGCAGAGTTGCCCATCCTCTCGCCAGTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGGTGCTCTGGTACTTGTaGAGGAGATCTGACTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGVLWYL*RRSDCT Trigger: GGTGCAGTCAGATCTCCTTCACAAGTACCAGAGCAC...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGATGCCGCCCAAATTCTTTaGGTGCCTTTATCTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKRSGGGLLMGAGWVWADAAQIL*VPLSPS Trigger: GGACGGAGATAAAGGCACTCAAAGAATTTGGGCGGC...ATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | TTGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGAGCCGCCCAAATTCTTTaGGTGCCTTTATCTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQKKWRWAADGGWMGVGGAAQIL*VPLSPS Trigger: GGACGGAGATAAAGGCACTCAAAGAATTTGGGCGGC...TCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACGAGCTCGCTGTAGATTaGCAGGACGGACGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDELAVD*QDGRVA Trigger: TGCCACCCGTCCGTCCTGCCAATCTACAGCGAGCTC...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGATCATCCTCCTCTCCCATaGGGGATTTTATGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CKRSGGGLLMGAGWVWADHPPLP*GILWLK Trigger: CTTCAGCCATAAAATCCCTCATGGGAGAGGAGGATG...ATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACGGCACCGTCATGTTCTaGAGCTCCGTTAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDGTVMF*SSVSSR Trigger: CCTCGAGCTAACGGAGCTGCAGAACATGACGGTGCC...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAAGTGGCCTTCGTCGGTaGCAGAGGAGCAAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AARNLEKQKSTVPKCRSRSGLRR*QRSKPS Trigger: ACTGGGCTTGCTCCTCTGGCACCGACGAAGGCCACT...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | TGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGATTGCAGCCGGTTTCCTTaGAACAGATCAGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKRSGGGLLMGAGWVWADCSRFP*NRSAVG Trigger: ACCTACTGCTGATCTGTTCCAAGGAAACCGGCTGCA...ATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGCAAACGCGAAGGCGATaGTTGGTAAAGCATACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGQTRRR*LVKHTP Trigger: CGGTGTATGCTTTACCAACCATCGCCTTCGCGTTTG...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | GTGAGGTGGGGCCGGAAGAGGCCACTACAATGGGTCTaGGTGAACTGTGTCCAGGGAGTAGGGCAGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRWGRKRPLQWV*VNCVQGVGQFS Trigger: GCTAAACTGCCCTACTCCCTGGACACAGTTCACCAAGACCCATTGTAGTGGCCTCTTCCGGCCCCACCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR TCA 90 bp | CTACCCTACCTGGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATGTGCTCTGGTACTTGTaGAGGAGATCTGACTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPYLALIPHPGNQSPSEDVLWYL*RRSDCT Trigger: GGTGCAGTCAGATCTCCTTCACAAGTACCAGAGCAC...ATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR GCA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAGGCACCGTCATGTTCTaGAGCTCCGTTAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AARNLEKQKSTVPKCRSRGTVMF*SSVSSR Trigger: CCTCGAGCTAACGGAGCTGCAGAACATGACGGTGCC...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATCCAGATGGCTGTTTGTaGGACTCCTCCTACTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPAALGQSMSGDQSCLKYPDGCL*DSSYSP Trigger: GGGAGAGTAGGAGGAGTCTCACAAACAGCCATCTGG...ATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | CTACCCTACCTGGCTCTCATTCCTCACCCCGGGAACCAATCGCCTTCCGAGGATCATCCTCCTCTCCCATaGGGGATTTTATGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPYLALIPHPGNQSPSEDHPPLP*GILWLK Trigger: CTTCAGCCATAAAATCCCTCATGGGAGAGGAGGATG...ATCCTCGGAAGGCGATTGGTTCCCGGGGTGAGGAATGAGAGCCAGGTAGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR GCA 90 bp | TCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTGGCACCGTCATGTTCTaGAGCTCCGTTAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSESLCGNPRGTLCVSGTVMF*SSVSSR Trigger: CCTCGAGCTAACGGAGCTGCAGAACATGACGGTGCC...AGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GGACAAGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGATCGCCCCAGTGTTCTaGAGAGAGGTGGCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQDGGTKSGEAEIHGPKVIAPVF*REVAPK Trigger: CTTCGGAGCCACCTCTCTGCAGAACACTGGGGCGAT...CACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | AGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTGGAGAAGCAATCGACGTACCAGGCTaGAAATGCATCCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRTVGRAGQDGGTKSGEAIDVPG*KCILLS Trigger: GGAGAGGAGGATGCATTTTCAGCCTGGTACGTCGAT...TGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATATCGACGTACCAGGCTaGAAATGCATCCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPAALGQSMSGDQSCLKYIDVPG*KCILLS Trigger: GGAGAGGAGGATGCATTTTCAGCCTGGTACGTCGAT...ATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTGTTTCTGATCGACGTACCAGGCTaGAAATGCATCCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVSLCVATREEPCAFLFLIDVPG*KCILLS Trigger: GGAGAGGAGGATGCATTTTCAGCCTGGTACGTCGAT...CAGAAACAGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACACGATGATCGAACTGTaGAAAACAGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDTMIEL*KTAQAR Trigger: CCGTGCCTGTGCTGTTTTTCACAGTTCGATCATCGT...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | CCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATTGGGCATGCTGCCGCCCAAATTCTTTaGGTGCCTTTATCTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPCRVIRAASNIGHAAAQIL*VPLSPS Trigger: GGACGGAGATAAAGGCACTCAAAGAATTTGGGCGGC...AGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACATGGTCACCAAGACATaGCGGCACAGGTGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDMVTKT*RHRWNF Trigger: AAAGTTCCACCTGTGCCGCCATGTCTTGGTGACCAT...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | CGAGAGGACGCGGGTCCTTCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGATCTCCCGATCTGAGATaGACTTGCTATTTATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: REDAGPSRSSESLCGNPRSPDLR*TCYLSG Trigger: GCCAGATAAATAGCAAGTTCATCTCAGATCGGGAGA...TCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGAAGGACCCGCGTCCTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGCTTGTGAAGGAGATCTaGCTGCACCTTTTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGLVKEI*LHLFIK Trigger: TTTTATGAAAAGGTGCAGTCAGATCTCCTTCACAAG...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | GGGCATGCTCAGATGCAGCCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCGTGCTCTGGTACTTGTaGAGGAGATCTGACTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GHAQMQPWHATCLSKGLSVLWYL*RRSDCT Trigger: GGTGCAGTCAGATCTCCTTCACAAGTACCAGAGCAC...GGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATTGCAGCCGGTTTCCTTaGAACAGATCAGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPAALGQSMSGDQSCLKYCSRFP*NRSAVG Trigger: ACCTACTGCTGATCTGTTCCAAGGAAACCGGCTGCA...ATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTAGAGCTCGCTGTAGATTaGCAGGACGGACGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EREPLYFSPDHQAVKPWLELAVD*QDGRVA Trigger: TGCCACCCGTCCGTCCTGCCAATCTACAGCGAGCTC...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CCA 90 bp | AGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTGGAGAAGCAATGGTCACCAAGACATaGCGGCACAGGTGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTVGRAGQDGGTKSGEAMVTKT*RHRWNF Trigger: AAAGTTCCACCTGTGCCGCCATGTCTTGGTGACCAT...TGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CAA 72 bp | GCAGGCAAGGAGGGGAGCCCTAAGAACTCCTCTTCTTaGACCACCACCTACACTCAGGGTTTTGAACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGKEGSPKNSSS*TTTYTQGFELS Trigger: GCTAAGTTCAAAACCCTGAGTGTAGGTGGTGGTCAAAGAAGAGGAGTTCTTAGGGCTCCCCTCCTTGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | GGGCATGCTCAGATGCAGCCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCACGATGATCGAACTGTaGAAAACAGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GHAQMQPWHATCLSKGLSTMIEL*KTAQAR Trigger: CCGTGCCTGTGCTGTTTTTCACAGTTCGATCATCGT...GGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GGACAAGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGACGATGATCGAACTGTaGAAAACAGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDGGTKSGEAEIHGPKVTMIEL*KTAQAR Trigger: CCGTGCCTGTGCTGTTTTTCACAGTTCGATCATCGT...CACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | AGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTGGAGAAGCAACAGCGGAAGGATTATaGCAAAGGTCACCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTVGRAGQDGGTKSGEATAEGL*QRSPSP Trigger: TGGTGATGGTGACCTTTGGCATAATCCTTCCGCTGT...TGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAACAGCGGAAGGATTATaGCAAAGGTCACCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AARNLEKQKSTVPKCRSRTAEGL*QRSPSP Trigger: TGGTGATGGTGACCTTTGGCATAATCCTTCCGCTGT...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACCCCAAATTCTTTGAGTaGCTTTATCTCCGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDPKFFE*LYLRPG Trigger: ACCAGGACGGAGATAAAGGCACTCAAAGAATTTGGG...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | AACAATCACAGGCAGGAAGGGTCCTCCTGCCGTCCCCAGCTGAGGCAAGAGGGGAACTTGCTATTTATCTaGCCGTTTTCTACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNHRQEGSSCRPQLRQEGNLLFI*PFSTSV Trigger: CACAGAAGTAGAAAACGGCCAGATAAATAGCAAGTT...CCCCTCTTGCCTCAGCTGGGGACGGCAGGAGGACCCTTCCTGCCTGTGATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTATGGTCACCAAGACATaGCGGCACAGGTGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSESLCGNPRGTLCVSMVTKT*RHRWNF Trigger: AAAGTTCCACCTGTGCCGCCATGTCTTGGTGACCAT...AGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | AGGAGAACTGTGGGAAGGGCTGGACAAGATGGCGGCACGAAATCTGGAGAAGCATCTCCCGATCTGAGATaGACTTGCTATTTATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTVGRAGQDGGTKSGEASPDLR*TCYLSG Trigger: GCCAGATAAATAGCAAGTTCATCTCAGATCGGGAGA...TGCTTCTCCAGATTTCGTGCCGCCATCTTGTCCAGCCCTTCCCACAGTTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACCTCCGTCCTGGTTCGTaGTTTTTAAATAAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDLRPGS*FLNKET Trigger: CGTCTCTTTATTTAAAAATCACGAACCAGGACGGAG...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGGGCACCGTCATGTTCTaGAGCTCCGTTAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SISDVEVCFFCAAERWISGTVMF*SSVSSR Trigger: CCTCGAGCTAACGGAGCTGCAGAACATGACGGTGCC...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAGCCACAACAATGAGGAGACGGGAGGAGAACTGTGGGAAGGGCTGGACATGTTGGAAACCATCTaGATTTTCTTCTGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSHNNEETGGELWEGLDMLETI*IFFCDR Trigger: CCGGTCACAGAAGAAAATGCAGATGGTTTCCAACAT...GTCCAGCCCTTCCCACAGTTCTCCTCCCGTCTCCTCATTGTTGTGGCTTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATCCCAAATTCTTTGAGTaGCTTTATCTCCGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPAALGQSMSGDQSCLKYPKFFE*LYLRPG Trigger: ACCAGGACGGAGATAAAGGCACTCAAAGAATTTGGG...ATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | CCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATTGGGCATGCTTTCCTTTTCTCCAGATaGCTGTTTGTGAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPCRVIRAASNIGHAFLFSR*LFVRLL Trigger: GAGGAGTCTCACAAACAGCCATCTGGAGAAAAGGAA...AGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CAA 72 bp | GAAGGTGGTCTGGCTAAGGAGTACGTCCTTAGGCATTaGGGCAGTCTCATTTGTCATCATGGGAACCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGGLAKEYVLRH*GSLICHHGNQG Trigger: CCCTTGGTTCCCATGATGACAAATGAGACTGCCCAAATGCCTAAGGACGTACTCCTTAGCCAGACCACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | CTCACCTGTCCTGACTACACTACTTACACAGAAATGTaGTCCCCAGTTCCGTGGTTCTCAGAGTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTCPDYTTYTEM*SPVPWFSESAP Trigger: GGGAGCAGACTCTGAGAACCACGGAACTGGGGACAACATTTCTGTGTAAGTAGTGTAGTCAGGACAGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAAGCATACACCGTCTTTaGGTTGAAGGTGACATACTT | + |
|
Preference number: 4 (lower is better) Translates to: AARNLEKQKSTVPKCRSRSIHRL*VEGDIL Trigger: AAGTATGTCACCTTCAACTCAAAGACGGTGTATGCT...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTGTTTCTGCTCCGTCCTGGTTCGTaGTTTTTAAATAAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AVSLCVATREEPCAFLFLLRPGS*FLNKET Trigger: CGTCTCTTTATTTAAAAATCACGAACCAGGACGGAG...CAGAAACAGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | TCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTCCCAAATTCTTTGAGTaGCTTTATCTCCGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSESLCGNPRGTLCVSPKFFE*LYLRPG Trigger: ACCAGGACGGAGATAAAGGCACTCAAAGAATTTGGG...AGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GACGCGGGTCCTTCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCAACTTGCTATTTATCTaGCCGTTTTCTACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DAGPSRSSESLCGNPRGTNLLFI*PFSTSV Trigger: CACAGAAGTAGAAAACGGCCAGATAAATAGCAAGTT...GGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGAAGGACCCGCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GGACAAGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGCAGGGAGGTTGTTCCTaGAATATACTCGTCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDGGTKSGEAEIHGPKVQGGCS*NILVAF Trigger: AAATGCGACGAGTATATTCCAGGAACAACCTCCCTG...CACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CAA 72 bp | CTGGTTAAGTCTGTAGATGAGGTTCATGCTGCTGCCTaGAGGGTGCACAGTTTGAGAAACACCAGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKSVDEVHAAA*RVHSLRNTSLR Trigger: CCTCAAGCTGGTGTTTCTCAAACTGTGCACCCTCAAGGCAGCAGCATGAACCTCATCTACAGACTTAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | AGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTTCTCCCGATCTGAGATaGACTTGCTATTTATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWRHEIWRSRNPRSQSVGSPDLR*TCYLSG Trigger: GCCAGATAAATAGCAAGTTCATCTCAGATCGGGAGA...ACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | AGAGGCGGCTGTGGGTTTTTACCCTTTTTCCTGTCTAGGACCTGTGGTCAGCTGCTCCGTCCTGGTTCGTaGTTTTTAAATAAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: RGGCGFLPFFLSRTCGQLLRPGS*FLNKET Trigger: CGTCTCTTTATTTAAAAATCACGAACCAGGACGGAG...CAGCTGACCACAGGTCCTAGACAGGAAAAAGGGTAAAAACCCACAGCCGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR GCA 90 bp | CCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATTGGGCATGCTTTAGGAAAAACATCATaGAGCTTAGGGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSDSPCRVIRAASNIGHALGKTS*SLGKTH Trigger: GTGGGTTTTCCCTAAGCTGCATGATGTTTTTCCTAA...AGCATGCCCAATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GGACAAGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGATGTTGGAAACCATCTaGATTTTCTTCTGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDGGTKSGEAEIHGPKVMLETI*IFFCDR Trigger: CCGGTCACAGAAGAAAATGCAGATGGTTTCCAACAT...CACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | CCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCCTGTGTGCTATGTTAACCCAAACGCGAAGGCGATaGTTGGTAAAGCATACACCG | + |
|
Preference number: 4 (lower is better) Translates to: PWHATCLSKGLSLCAMLTQTRRR*LVKHTP Trigger: CGGTGTATGCTTTACCAACCATCGCCTTCGCGTTTG...GGTTAACATAGCACACAGGGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR TCA 90 bp | TCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTCTTGTGAAGGAGATCTaGCTGCACCTTTTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSESLCGNPRGTLCVSLVKEI*LHLFIK Trigger: TTTTATGAAAAGGTGCAGTCAGATCTCCTTCACAAG...AGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR GCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTAACAGCGGAAGGATTATaGCAAAGGTCACCATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EREPLYFSPDHQAVKPWLTAEGL*QRSPSP Trigger: TGGTGATGGTGACCTTTGGCATAATCCTTCCGCTGT...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR GCA 90 bp | AGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTTTAGGAAAAACATCATaGAGCTTAGGGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWRHEIWRSRNPRSQSVGLGKTS*SLGKTH Trigger: GTGGGTTTTCCCTAAGCTGCATGATGTTTTTCCTAA...ACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTACAGGGAGGTTGTTCCTaGAATATACTCGTCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EREPLYFSPDHQAVKPWLQGGCS*NILVAF Trigger: AAATGCGACGAGTATATTCCAGGAACAACCTCCCTG...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | TCCAATGAAGAAAAATCCATTCCGGGTTACAGAGCTTaGGAATATGGTCTCCCTGTGACCAGGCCTAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNEEKSIPGYRA*EYGLPVTRPSP Trigger: TGGACTAGGCCTGGTCACAGGGAGACCATATTCCAAAGCTCTGTAACCCGGAATGGATTTTTCTTCATTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | TCTATCTCTGATGTTGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGATCTCGTCTCCCGATCTGAGATaGACTTGCTATTTATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SISDVEVCFFCAAERWISSPDLR*TCYLSG Trigger: GCCAGATAAATAGCAAGTTCATCTCAGATCGGGAGA...CGAGATCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR TCA 90 bp | CCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCCTGTGTGCTATGTTAACCAGCATACACCGTCTTTaGGTTGAAGGTGACATACTT | + |
|
Preference number: 4 (lower is better) Translates to: PWHATCLSKGLSLCAMLTSIHRL*VEGDIL Trigger: AAGTATGTCACCTTCAACTCAAAGACGGTGTATGCT...GGTTAACATAGCACACAGGGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| 3UTR CAA 72 bp | TCACCCCCAGATGAGAAATCTGTGCTCAGTGAGTATTaGGATCTGAGACTTTCAACCAGGATACAACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPDEKSVLSEY*DLRLSTRIQLA Trigger: AGCCAGTTGTATCCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGGGGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | CTGCCCTTTACTCTGAGACAATGTCTATCTCTGATGTaGAGGTGTGTTTCTTCTGTGCAGCAGAACGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPFTLRQCLSLM*RCVSSVQQNDG Trigger: TCCATCGTTCTGCTGCACAGAAGAAACACACCTCAACATCAGAGATAGACATTGTCTCAGAGTAAAGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | AATACTTTGACATCTCCCTTTCCAATCTGTATCCCCTaGGTCTCCTTCAGTCGTCTTACGGCTCTAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: NTLTSPFPICIP*VSFSRLTALAT Trigger: TGTAGCTAGAGCCGTAAGACGACTGAAGGAGACCAAGGGGATACAGATTGGAAAGGGAGATGTCAAAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCATAGTTCTGAGAGGGAGAGAGAGAGAAGCCACAACAATGAGGAGACGTTAGGAAAAACATCATaGAGCTTAGGGAAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFHSSERERERSHNNEETLGKTS*SLGKTH Trigger: GTGGGTTTTCCCTAAGCTGCATGATGTTTTTCCTAA...CGTCTCCTCATTGTTGTGGCTTCTCTCTCTCTCCCTCTCAGAACTATGGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CCA 90 bp | CCAGATGAGAAATCTGTGCTCAGTGAGTATTTGGATCTGAGACTTTCAACCAGGCAGGGAGGTTGTTCCTaGAATATACTCGTCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PDEKSVLSEYLDLRLSTRQGGCS*NILVAF Trigger: AAATGCGACGAGTATATTCCAGGAACAACCTCCCTG...CCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | GAGGGTGCACAGTTTGAGAAACACCAGCTTGAGGGCTaGAATGCTTGGCATAATTATTGTTATAGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGAQFEKHQLEG*NAWHNYCYSEA Trigger: TGCCTCACTATAACAATAATTATGCCAAGCATTCAAGCCCTCAAGCTGGTGTTTCTCAAACTGTGCACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | CCTCTGTTTAACTTCTGTCTGGGTAAGAGTAGGGCATaGAAGCCTCCTACTCTTAACATGTGGAGTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PLFNFCLGKSRA*KPPTLNMWSSM Trigger: CATTGAACTCCACATGTTAAGAGTAGGAGGCTTCAATGCCCTACTCTTACCCAGACAGAAGTTAAACAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCATCCTCCTCTCCCATaGGGGATTTTATGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRVGFLTCTHSANSTSNKHPPLP*GILWLK Trigger: CTTCAGCCATAAAATCCCTCATGGGAGAGGAGGATG...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR GCA 90 bp | CCAGATGAGAAATCTGTGCTCAGTGAGTATTTGGATCTGAGACTTTCAACCAGGATGTTGGAAACCATCTaGATTTTCTTCTGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PDEKSVLSEYLDLRLSTRMLETI*IFFCDR Trigger: CCGGTCACAGAAGAAAATGCAGATGGTTTCCAACAT...CCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAAACGCGAAGGCGATaGTTGGTAAAGCATACACCG | + |
|
Preference number: 4 (lower is better) Translates to: KRVGFLTCTHSANSTSNKQTRRR*LVKHTP Trigger: CGGTGTATGCTTTACCAACCATCGCCTTCGCGTTTG...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR TCA 90 bp | CCAGATGAGAAATCTGTGCTCAGTGAGTATTTGGATCTGAGACTTTCAACCAGGCTTGTGAAGGAGATCTaGCTGCACCTTTTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDEKSVLSEYLDLRLSTRLVKEI*LHLFIK Trigger: TTTTATGAAAAGGTGCAGTCAGATCTCCTTCACAAG...CCTGGTTGAAAGTCTCAGATCCAAATACTCACTGAGCACAGATTTCTCATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CCA 90 bp | GGTTTCCCTCGGCGAAGGCCTACTATGCTTGAGTCTACTAATTTAGCAGAAAAGAACTTGCTATTTATCTaGCCGTTTTCTACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPRRRPTMLESTNLAEKNLLFI*PFSTSV Trigger: CACAGAAGTAGAAAACGGCCAGATAAATAGCAAGTT...CTTTTCTGCTAAATTAGTAGACTCAAGCATAGTAGGCCTTCGCCGAGGGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCTTTTAGTATTACCAGCAATTCACTGCGTTTTAGAGGACAACTTTCTGTGCAGCCGGTTTCCTTaGAACAGATCAGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLVLPAIHCVLEDNFLCSRFP*NRSAVG Trigger: ACCTACTGCTGATCTGTTCCAAGGAAACCGGCTGCA...CAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | GTCTATTGTGTTAGATATCAGAAGGGCTACACCAGCTaGCTTTTTGGAAAATCTTTCCCTGCCCTTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYCVRYQKGYTS*LFGKSFPALYS Trigger: AGAGTAAAGGGCAGGGAAAGATTTTCCAAAAAGCAAGCTGGTGTAGCCCTTCTGATATCTAACACAATAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | CTTGCCAAGACTTTAATCATGAAGGTGTGCTGGGTTTaGTCAAAGGCTTTCTCAGCATCTAATGAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LAKTLIMKVCWV*SKAFSASNEMI Trigger: GATCATCTCATTAGATGCTGAGAAAGCCTTTGACAAAACCCAGCACACCTTCATGATTAAAGTCTTGGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | ATCTGGGATACTGGCTTGCTGTATATTGTCTTTATTTaGTTTAGGTGTGTCCTTTGTATCCCTGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IWDTGLLYIVFI*FRCVLCIPGLA Trigger: GGCAAGACCAGGGATACAAAGGACACACCTAAACAAAATAAAGACAATATACAGCAAGCCAGTATCCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCAACACTAATAGCATACACCGTCTTTaGGTTGAAGGTGACATACTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLPAHTLQTLLLTSNTNSIHRL*VEGDIL Trigger: AAGTATGTCACCTTCAACTCAAAGACGGTGTATGCT...ATTAGTGTTGCTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| 3UTR CAA 72 bp | ACTATACCGAATAGATATGGAGTGGACAGTCTTGTCTaGGTCCTGATTTTAGTGGACCTGTTTAATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIPNRYGVDSLV*VLILVDLFNLL Trigger: GAGAAGATTAAACAGGTCCACTAAAATCAGGACCAAGACAAGACTGTCCACTCCATATCTATTCGGTATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | TACTGTCTCTCTGCTTTTTGCCTGTTGGCTAAGGGTTaGTCTATCTTGTTGATTTTCTCAAAGAACCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: YCLSAFCLLAKG*SILLIFSKNQL Trigger: AAGTTGGTTCTTTGAGAAAATCAACAAGATAGACAAACCCTTAGCCAACAGGCAAAAAGCAGAGAGACAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| 3UTR CAA 72 bp | GAACTCTGTTCTAAAACCATCTGGCCTTGGGCTCTTTaGTTGTTGTTGTTGTTGTTGTTGTTGTTAGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELCSKTIWPWAL*LLLLLLLLLVS Trigger: ACTAACTAACAACAACAACAACAACAACAACAACAAAAGAGCCCAAGGCCAGATGGTTTTAGAACAGAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATTGTGTTAGATATCAGAAGGGCTACACCAGCTTGCTTTTTGGAAAATCTAACTTGCTATTTATCTaGCCGTTTTCTACTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYCVRYQKGYTSLLFGKSNLLFI*PFSTSV Trigger: CACAGAAGTAGAAAACGGCCAGATAAATAGCAAGTT...AGATTTTCCAAAAAGCAAGCTGGTGTAGCCCTTCTGATATCTAACACAATAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
||
| CDS GCA 90 bp | TGTTCTGCAGAGAGGTGGCTCCGAAGATCACCAGCTTCCCCGTGGTaGCGAAGACTTGCTCTCCCAGCTTCTCATACACCATGCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSAERWLRRSPASPW*RRLALPASHTPCSR Trigger: CCGGCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTCTCTGCAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | TTGCAAAAGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGAACGCGAAGGCGATGGTaGGTAAAGCATACACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQKKWRWAADGGWMGVGGTRRRW*VKHTPS Trigger: AGACGGTGTATGCTTTACCAACCATCGCCTTCGCGT...TCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCTTTTGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS GCA 90 bp | GAGGTGGCTCCGAAGATCACCAGCTTCCCCGTGGTGCCGAAGACTTaGTCTCCCAGCTTCTCATACACCATGCAGCCGGTTTCCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVAPKITSFPVVPKT*SPSFSYTMQPVSLE Trigger: TTCCAAGGAAACCGGCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS CCA 90 bp | CAGTGTTCTGCAGAGAGGTGGCTCCGAAGATCACCAGCTTCCCCGTaGTGCCGAAGACTTGCTCTCCCAGCTTCTCATACACCATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCSAERWLRRSPASP*CRRLALPASHTPCS Trigger: GCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTCTCTGCAGAACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GAGGACGCGGGTCCTTCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGACGTGGTGCCGAAGACTaGCTCTCCCAGCTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: EDAGPSRSSESLCGNPRGRGAED*LSQLLI Trigger: TATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACG...TCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGAAGGACCCGCGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGGCGGTGGGCTGCTGATGGGGGCTGGATGGGTGTGGGCGGATGCTGGGAAGATCACCAACAGGTaGATAATGATCAAGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: RSGGGLLMGAGWVWADAGKITNR*IMIKSM Trigger: CATACTCTTGATCATTATCAACCTGTTGGTGATCTT...CCCAGCATCCGCCCACACCCATCCAGCCCCCATCAGCAGCCCACCGCCACTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAACGCGAAGGCGATGGTaGGTAAAGCATACACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AARNLEKQKSTVPKCRSRTRRRW*VKHTPS Trigger: AGACGGTGTATGCTTTACCAACCATCGCCTTCGCGT...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS GCA 90 bp | AGCCAAGATACCCCAGGTTCTTCAAGAGACACAGCGGAAGGATTATaGCAAAGGTCACCATCACCACCAACACTCGGCCATCGACGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SQDTPGSSRDTAEGL*QRSPSPPTLGHRRT Trigger: GGTACGTCGATGGCCGAGTGTTGGTGGTGATGGTGACCTTTGGCATAATCCTTCCGCTGTGTCTCTTGAAGAACCTGGGGTATCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | AGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCGTGGTGCCGAAGACTaGCTCTCCCAGCTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RWRHEIWRSRNPRSQSVGRGAED*LSQLLI Trigger: TATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACG...ACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GGACAAGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGGGCCGCCCAAATTCTTaGAGTGCCTTTATCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQDGGTKSGEAEIHGPKVGRPNS*SAFISV Trigger: GACGGAGATAAAGGCACTCAAAGAATTTGGGCGGCC...CACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCTTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GGGCATGCTCAGATGCAGCCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCGGCCGCCCAAATTCTTaGAGTGCCTTTATCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GHAQMQPWHATCLSKGLSGRPNS*SAFISV Trigger: GACGGAGATAAAGGCACTCAAAGAATTTGGGCGGCC...GGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGGCTGCATCTGAGCATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTCAACAGTGTGGAGAGCCTGTGTGCTGAAGGGAAACTCGGTTTCCCTCCGATCTGAGATGAACTaGCTATTTATCTGGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSTVWRACVLKGNSVSLRSEMN*LFIWPF Trigger: AAACGGCCAGATAAATAGCAAGTTCATCTCAGATCG...GAGGGAAACCGAGTTTCCCTTCAGCACACAGGCTCTCCACACTGTTGACCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | GTACCAGCAGCCCTCGGACAGTCCATGTCGGGTGATCAGAGCTGCCTCAAATATCGATCTGAGATGAACTaGCTATTTATCTGGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPAALGQSMSGDQSCLKYRSEMN*LFIWPF Trigger: AAACGGCCAGATAAATAGCAAGTTCATCTCAGATCG...ATATTTGAGGCAGCTCTGATCACCCGACATGGACTGTCCGAGGGCTGCTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | AGATGGCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTACATTCCCAGGGAGGTaGTTCCTGGAATATACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RWRHEIWRSRNPRSQSVGTFPGR*FLEYTR Trigger: ACGAGTATATTCCAGGAACAACCTCCCTGGGAATGT...ACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGATACACCGTCTTTGAGTaGAAGGTGACATACTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AARNLEKQKSTVPKCRSRYTVFE*KVTYFG Trigger: ACCAAAGTATGTCACCTTCAACTCAAAGACGGTGTA...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTGTTTCTGGCAAAGAAGGAGATGTaGGAAACCATCTGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVSLCVATREEPCAFLFLAKKEM*ETICIF Trigger: GAAAATGCAGATGGTTTCCAACATCTCCTTCTTTGC...CAGAAACAGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGCCTCCTCTGTTAGCTTCTACTCACCCCCAGATGAGAAATCTGTGCTCCGATCTGAGATGAACTaGCTATTTATCTGGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VWASSVSFYSPPDEKSVLRSEMN*LFIWPF Trigger: AAACGGCCAGATAAATAGCAAGTTCATCTCAGATCG...GAGCACAGATTTCTCATCTGGGGGTGAGTAGAAGCTAACAGAGGAGGCCCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | TCTAGAAGCAGTGAGTCTCTGTGTGGCAACCCGAGAGGAACCCTGTGCGTTTCTGCAAAGAAGGAGATGTaGGAAACCATCTGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSSESLCGNPRGTLCVSAKKEM*ETICIF Trigger: GAAAATGCAGATGGTTTCCAACATCTCCTTCTTTGC...AGAAACGCACAGGGTTCCTCTCGGGTTGCCACACAGAGACTCACTGCTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | AGACCTGGTACTAGAACACTCCGCGTATCAATATTTTCTATTTTGCAGCGCCGGGGCCGCCCAAATTCTTaGAGTGCCTTTATCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPGTRTLRVSIFSILQRRGRPNS*SAFISV Trigger: GACGGAGATAAAGGCACTCAAAGAATTTGGGCGGCC...CCGGCGCTGCAAAATAGAAAATATTGATACGCGGAGTGTTCTAGTACCAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | GCGGCACGAAATCTGGAGAAGCAGAAATCCACGGTCCCAAAGTGTAGGTCCCGAAAGATCACCAACAGGTaGATAATGATCAAGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: AARNLEKQKSTVPKCRSRKITNR*IMIKSM Trigger: CATACTCTTGATCATTATCAACCTGTTGGTGATCTT...TCGGGACCTACACTTTGGGACCGTGGATTTCTGCTTCTCCAGATTTCGTGCCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGCGTGGTGCCGAAGACTaGCTCTCCCAGCTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KRVGFLTCTHSANSTSNKRGAED*LSQLLI Trigger: TATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACG...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | GAGCGAGAGCCTTTGTACTTTTCACCTGATCACCAAGCAGTGAAGCCATGGTTATACACCGTCTTTGAGTaGAAGGTGACATACTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EREPLYFSPDHQAVKPWLYTVFE*KVTYFG Trigger: ACCAAAGTATGTCACCTTCAACTCAAAGACGGTGTA...TAACCATGGCTTCACTGCTTGGTGATCAGGTGAAAAGTACAAAGGCTCTCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | CCATGGCACGCAACCTGTCTCTCAAAAGGATTATCCCTGTGTGCTATGTTAACCGCAAAGAAGGAGATGTaGGAAACCATCTGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PWHATCLSKGLSLCAMLTAKKEM*ETICIF Trigger: GAAAATGCAGATGGTTTCCAACATCTCCTTCTTTGC...GGTTAACATAGCACACAGGGATAATCCTTTTGAGAGACAGGTTGCGTGCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
||
| CDS-3UTR CAA 90 bp | CTAAGTCTTTTAGTATTACCAGCAATTCACTGCGTTTTAGAGGACAACTTTCTGACGCGAAGGCGATGGTaGGTAAAGCATACACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLLVLPAIHCVLEDNFLTRRRW*VKHTPS Trigger: AGACGGTGTATGCTTTACCAACCATCGCCTTCGCGT...CAGAAAGTTGTCCTCTAAAACGCAGTGAATTGCTGGTAATACTAAAAGACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGAGTAGGTTTTCTTACCTGCACACACTCTGCAAACTCTACTTCTAACAAGTACACCGTCTTTGAGTaGAAGGTGACATACTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRVGFLTCTHSANSTSNKYTVFE*KVTYFG Trigger: ACCAAAGTATGTCACCTTCAACTCAAAGACGGTGTA...CTTGTTAGAAGTAGAGTTTGCAGAGTGTGTGCAGGTAAGAAAACCTACTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 |
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| CDS-3UTR CAA 90 bp | TTTATCAGCTGTAGGAGTTCCCTGTTGAATTTTGAGGGTCACGTATGTATATTACGATCTGAGATGAACTaGCTATTTATCTGGCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: FISCRSSLLNFEGHVCILRSEMN*LFIWPF Trigger: AAACGGCCAGATAAATAGCAAGTTCATCTCAGATCG...TAATATACATACGTGACCCTCAAAATTCAACAGGGAACTCCTACAGCTGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230767.2 |
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| CDS CCA 72 bp | GGTAGCTCAGCATCGCCCCAGTGTTCTGCAGAGAGGTaGCTCCGAAGATCACCAGCTTCCCCGTGGTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GSSASPQCSAER*LRRSPASPWCR Trigger: TCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTCTCTGCAGAACACTGGGGCGATGCTGAGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 90 bp | AGAGGTGGCTCCGAAGATCACCAGCTTCCCCGTGGTGCCGAAGACTaGCTCTCCCAGCTTCTCATACACCATGCAGCCGGTTTCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RGGSEDHQLPRGAED*LSQLLIHHAAGFLG Trigger: TCCAAGGAAACCGGCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS GCA 72 bp | CCGAAGATCACCAGCTTCCCCGTGGTGCCGAAGACTTaGTCTCCCAGCTTCTCATACACCATGCAGCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: PKITSFPVVPKT*SPSFSYTMQPV Trigger: AACCGGCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS GCA 72 bp | GAGAGGTGGCTCCGAAGATCACCAGCTTCCCCGTGGTaGCGAAGACTTGCTCTCCCAGCTTCTCATACACCA | + |
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Preference number: 6 (lower is better) Translates to: ERWLRRSPASPW*RRLALPASHTP Trigger: TGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGAGCCACCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 72 bp | TCCGAAGATCACCAGCTTCCCCGTGGTGCCGAAGACTaGCTCTCCCAGCTTCTCATACACCATGCAGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SEDHQLPRGAED*LSQLLIHHAAG Trigger: ACCGGCTGCATGGTGTATGAGAAGCTGGGAGAGCAAGTCTTCGGCACCACGGGGAAGCTGGTGATCTTCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 72 bp | GAAGTCAGAAGTATCAGAAAGAGGAGGATCCCGGTGTaGGCCAAGGCGAAGGCAAGGCCCAAGATTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: EVRSIRKRRIPV*AKAKARPKIPL Trigger: CAGTGGAATCTTGGGCCTTGCCTTCGCCTTGGCCAACACCGGGATCCTCCTCTTTCTGATACTTCTGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS GCA 72 bp | TTGCTGACGTTGTCATCTTCGGGCACCGTCATGTTCTaGAGCTCCGTTAGCTCGAGGCCACTTTTGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: LLTLSSSGTVMF*SSVSSRPLLKC Trigger: GCATTTCAAAAGTGGCCTCGAGCTAACGGAGCTGCAGAACATGACGGTGCCCGAAGATGACAACGTCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 ENSMUST00000230767.2 |
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| CDS GCA 72 bp | ACCCCAGGTTCTTCAAGAGACACAGCGGAAGGATTATaGCAAAGGTCACCATCACCACCAACACTCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TPGSSRDTAEGL*QRSPSPPTLGH Trigger: ATGGCCGAGTGTTGGTGGTGATGGTGACCTTTGGCATAATCCTTCCGCTGTGTCTCTTGAAGAACCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 90 bp | TGGCCGTTTTCTACTTCTGTGAAGTCATTAGAGTCGTTGCTGACGTaGTCATCTTCGGGCACCGTCATGTTCTGCAGCTCCGTTAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: WPFSTSVKSLESLLT*SSSGTVMFCSSVSS Trigger: CGAGCTAACGGAGCTGCAGAACATGACGGTGCCCGAAGATGACAACGTCAGCAACGACTCTAATGACTTCACAGAAGTAGAAAACGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 ENSMUST00000230767.2 |
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| CDS CAA 72 bp | AAGGCGATGGTTGGTAAAGCATACACCGTCTTTGAGTaGAAGGTGACATACTTTGGTGTGCACGCGTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: KAMVGKAYTVFE*KVTYFGVHASV Trigger: GACCGACGCGTGCACACCAAAGTATGTCACCTTCAACTCAAAGACGGTGTATGCTTTACCAACCATCGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 90 bp | ACAAACGCGAAGGCGATGGTTGGTAAAGCATACACCGTCTTTGAGTaGAAGGTGACATACTTTGGTGTGCACGCGTCGGTCACATTAGCA | + |
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Preference number: 6 (lower is better) Translates to: TNAKAMVGKAYTVFE*KVTYFGVHASVTLA Trigger: TGCTAATGTGACCGACGCGTGCACACCAAAGTATGTCACCTTCAACTCAAAGACGGTGTATGCTTTACCAACCATCGCCTTCGCGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 72 bp | TGGCCGTTTTCTACTTCTGTGAAGTCATTAGAGTCGTaGCTGACGTTGTCATCTTCGGGCACCGTCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: WPFSTSVKSLES*LTLSSSGTVMF Trigger: GAACATGACGGTGCCCGAAGATGACAACGTCAGCAACGACTCTAATGACTTCACAGAAGTAGAAAACGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 ENSMUST00000230767.2 |
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| CDS CAA 90 bp | CTATTTATCTGGCCGTTTTCTACTTCTGTGAAGTCATTAGAGTCGTaGCTGACGTTGTCATCTTCGGGCACCGTCATGTTCTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFIWPFSTSVKSLES*LTLSSSGTVMFCSS Trigger: GGAGCTGCAGAACATGACGGTGCCCGAAGATGACAACGTCAGCAACGACTCTAATGACTTCACAGAAGTAGAAAACGGCCAGATAAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 ENSMUST00000230767.2 |
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| CDS CAA 90 bp | ATGATGGTCACCAAGACATGGCGGCACAGGTGGAACTTTGTCTTCTaGGCCAGCTCAAATAACGATGATCGAACTGTGAAAAACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: MMVTKTWRHRWNFVF*ASSNNDDRTVKNST Trigger: TGTGCTGTTTTTCACAGTTCGATCATCGTTATTTGAGCTGGCCAAGAAGACAAAGTTCCACCTGTGCCGCCATGTCTTGGTGACCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CCA 72 bp | TTGATAATGATCAAGAGTATGATGGTCACCAAGACATaGCGGCACAGGTGGAACTTTGTCTTCTTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LIMIKSMMVTKT*RHRWNFVFLAS Trigger: GCTGGCCAAGAAGACAAAGTTCCACCTGTGCCGCCATGTCTTGGTGACCATCATACTCTTGATCATTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 72 bp | ACCAAGACATGGCGGCACAGGTGGAACTTTGTCTTCTaGGCCAGCTCAAATAACGATGATCGAACTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: TKTWRHRWNFVF*ASSNNDDRTVK Trigger: TTTCACAGTTCGATCATCGTTATTTGAGCTGGCCAAGAAGACAAAGTTCCACCTGTGCCGCCATGTCTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 90 bp | ACTCCAAAGATATCCTTCATGGAGGGGATGAAGATCACCAACAGGTaGATAATGATCAAGAGTATGATGGTCACCAAGACATGGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: TPKISFMEGMKITNR*IMIKSMMVTKTWRH Trigger: GTGCCGCCATGTCTTGGTGACCATCATACTCTTGATCATTATCAACCTGTTGGTGATCTTCATCCCCTCCATGAAGGATATCTTTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS TCA 72 bp | ATGGCTGTTTGTGAGACTCCTCCTACTCTCCCGATCTaGGATGAACTTGCTATTTATCTGGCCGTTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: MAVCETPPTLPI*DELAIYLAVFY Trigger: GTAGAAAACGGCCAGATAAATAGCAAGTTCATCTCAGATCGGGAGAGTAGGAGGAGTCTCACAAACAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 ENSMUST00000230767.2 |
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| CDS TCA 72 bp | CCACACTCATGCAGGGAGTCTGAAATTTCTTGTAGATaGCCACTATTAGGAAAAACATCATGCAGCTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: PHSCRESEISCR*PLLGKTSCSLG Trigger: CCCTAAGCTGCATGATGTTTTTCCTAATAGTGGTCATCTACAAGAAATTTCAGACTCCCTGCATGAGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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| CDS CAA 72 bp | ATATCCTTCATGGAGGGGATGAAGATCACCAACAGGTaGATAATGATCAAGAGTATGATGGTCACCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: ISFMEGMKITNR*IMIKSMMVTKT Trigger: TGTCTTGGTGACCATCATACTCTTGATCATTATCAACCTGTTGGTGATCTTCATCCCCTCCATGAAGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088452.11 ENSMUST00000088454.13 ENSMUST00000100262.4 |
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