Pregenerated sensors for SLC37A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032114Ensembl transcript IDs: ENSMUST00000165839.3, ENSMUST00000213268.2, ENSMUST00000213388.2, ENSMUST00000215001.2, ENSMUST00000215121.2, ENSMUST00000215420.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CAA 90 bp | GTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTaGCCCCCTGCCAAGAAGCCTTGGGGTACAGCAGAAACCACAGGC | + |
Preference number: 2 (lower is better) Translates to: VDSSPPLGTEVLATI*PPAKKPWGTAETTG Trigger: GCCTGTGGTTTCTGCTGTACCCCAAGGCTTCTTGGCAGGGGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR TCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCGGTAGAAACAGAAGCTaGTGGAGTCTAGAACCAAAC | + |
Preference number: 2 (lower is better) Translates to: VVDSSPPLGTEVLATILPGRNRS*WSLEPN Trigger: GTTTGGTTCTAGACTCCATCAGCTTCTGTTTCTACC...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR TCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCGGTAGAAACAGAAGCTaGTGGAGTCTAGAACCAAAC | + |
Preference number: 2 (lower is better) Translates to: ALYILPFCPRVFMRVVDSGRNRS*WSLEPN Trigger: GTTTGGTTCTAGACTCCATCAGCTTCTGTTTCTACC...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR GCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCTATTGGCAACAATTTTaGCCCCTGCCAAGAAGCCTT | + |
Preference number: 2 (lower is better) Translates to: ALYILPFCPRVFMRVVDSYWQQF*PLPRSL Trigger: AAGGCTTCTTGGCAGGGGGCAAAATTGTTGCCAATA...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR CCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCGGTTCAGAGAGACAGTaGAGACACAGAAACGTAAAG | + |
Preference number: 2 (lower is better) Translates to: ALYILPFCPRVFMRVVDSGSERQ*RHRNVK Trigger: CTTTACGTTTCTGTGTCTCCACTGTCTCTCTGAACC...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR TCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAGGTAGAAACAGAAGCTaGTGGAGTCTAGAACCAAAC | + |
Preference number: 2 (lower is better) Translates to: HRPLILTRRSGPRRRRRVGRNRS*WSLEPN Trigger: GTTTGGTTCTAGACTCCATCAGCTTCTGTTTCTACC...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR CCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAATTTTAAATAGAGCATaGGATGGGAGTCGGGACCTC | + |
Preference number: 2 (lower is better) Translates to: HRPLILTRRSGPRRRRRVILNRA*DGSRDL Trigger: GAGGTCCCGACTCCCATCCCATGCTCTATTTAAAAT...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR CAA 90 bp | TTTATTGATCTATACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTaGTCCCAGGGTATTCATGAGAGTGGTGGACTCCTCTCCTCCCTT | + |
Preference number: 2 (lower is better) Translates to: FIDLYKSVCPLYSSL*SQGIHESGGLLSSL Trigger: AAGGGAGGAGAGGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGTATAGATCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAATTTTAAATAGAGCATaGGATGGGAGTCGGGACCTC | + |
Preference number: 2 (lower is better) Translates to: TSRFALYILPFCPRVFMRILNRA*DGSRDL Trigger: GAGGTCCCGACTCCCATCCCATGCTCTATTTAAAAT...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR GCA 72 bp | ATCAAATCTAGCTTTATTGATCTATACAAGTCGGTTTaGCCTCTATATTCTTCCCTTTTGTCCCAGGGTATT | + |
Preference number: 3 (lower is better) Translates to: IKSSFIDLYKSV*PLYSSLLSQGI Trigger: AATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGTATAGATCAATAAAGCTAGATTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCACAGGGCCAGTGTGCTaGGCCAGCTGTAGCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPTGPVC*ASCSSG Trigger: CCCAGAGCTACAGCTGGCGCAGCACACTGGCCCTGT...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCCGCTCACAAACTTGCTaGTGGCGTAGGCTGCCGACT | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPRSQTC*WRRLPT Trigger: AGTCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCG...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCGCTGATGGCGTAGGCTaGCGACTGGCTGCTTGTGAT | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPADGVG*RLAACD Trigger: ATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGC...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACCAGACAGGGCCAGTGTaGTGCGCCAGCTGTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHQTGPV*CASCSS Trigger: AGAGCTACAGCTGGCGCAGCACACTGGCCCTGTCTG...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCCCCACAAGGGCGGACTaGCCTCGCTCCTGGATAAGG | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSPTRAD*PRSWIR Trigger: CCTTATCCAGGAGCGAGGGCAGTCCGCCCTTGTGGG...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCCCACGAGGTAGCCAGTaGACAGCACCCAGAGATAGG | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPPRGSQ*TAPRDR Trigger: CCTATCTCTGGGTGCTGTCCACTGGCTACCTCGTGG...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCGACTGCCCTCGCTCCTaGATAAGGAAGAACTGGCCC | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPDCPRS*IRKNWP Trigger: GGGCCAGTTCTTCCTTATCCAGGAGCGAGGGCAGTC...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR CAA 72 bp | GGGATGGGAGTCGGGACCTCATTAGCCACTGGTAACTaGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGA | + |
Preference number: 4 (lower is better) Translates to: GMGVGTSLATGN*QHHGGSERQWR Trigger: TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGTCCCGACTCCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGCGACCTCGAGGGCACTaGTGTAGGAGCTACCCACAA | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWRPRGH*CRSYPQ Trigger: TTGTGGGTAGCTCCTACATCAGTGCCCTCGAGGTCG...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACGCTGATGGCGTAGGCTaGCGACTGGCTGCTTGTGAT | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHADGVG*RLAACD Trigger: ATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGC...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACAGACAGGGCCAGTGTaGTGCGCCAGCTGTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRQTGPV*CASCSS Trigger: AGAGCTACAGCTGGCGCAGCACACTGGCCCTGTCTG...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACCCACGAGGTAGCCAGTaGACAGCACCCAGAGATAGG | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHPRGSQ*TAPRDR Trigger: CCTATCTCTGGGTGCTGTCCACTGGCTACCTCGTGG...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAGCCCTGCCTTCGCCATaGCCCTGTCTGACAGGTAAC | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRALPSP*PCLTGN Trigger: GTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGC...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCCCACCAAGGAGGGCATaGCAAAGGAGAAGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPPPRRA*QRRRFC Trigger: GCAAAACCTTCTCCTTTGTCATGCCCTCCTTGGTGG...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACGCTCACAAACTTGCTaGTGGCGTAGGCTGCCGACT | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRRSQTC*WRRLPT Trigger: AGTCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCG...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCCGCTCACAAACTTGCTaGTGGCGTAGGCTGCCGACT | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSRSQTC*WRRLPT Trigger: AGTCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCG...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCGCTGATGGCGTAGGCTaGCGACTGGCTGCTTGTGAT | + |
Preference number: 4 (lower is better) Translates to: ALYILPFCPRVFMRVVDSADGVG*RLAACD Trigger: ATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGC...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCTTCCAGCCAGGTTCATaGTGGTTGACAACACAGCCC | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPFQPGS*WLTTQP Trigger: GGGCTGTGTTGTCAACCAGCATGAACCTGGCTGGAA...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCGACAACCACACACAGTaGCCCAGACAGGGCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSDNHTQ*PRQGQC Trigger: ACACTGGCCCTGTCTGGGGCACTGTGTGTGGTTGTC...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACCCACAAGGGCGGACTaGCCTCGCTCCTGGATAAGG | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVPTRAD*PRSWIR Trigger: CCTTATCCAGGAGCGAGGGCAGTCCGCCCTTGTGGG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCTCCACAAACCACTTCTaGCACCCAGAAGGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPSTNHF*HPEGCA Trigger: AGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGA...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGCAGCCAGGTTCATGCTaGTTGACAACACAGCCCACC | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWQPGSC*LTTQPT Trigger: GGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTG...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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3UTR CAA 72 bp | TCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTaGCCCCCTGCCAAGAAGCCTTGGGGTACAGCAGAA | + |
Preference number: 4 (lower is better) Translates to: SPPLGTEVLATI*PPAKKPWGTAE Trigger: TTCTGCTGTACCCCAAGGCTTCTTGGCAGGGGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACCCACCAAGGAGGGCATaGCAAAGGAGAAGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHPPRRA*QRRRFC Trigger: GCAAAACCTTCTCCTTTGTCATGCCCTCCTTGGTGG...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGCAGGTTCATGCTGGTTaGCAACACAGCCCACCAAGT | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWQVHAG*QHSPPS Trigger: ACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTG...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGTAGCAATAGGCCGTaGCGAGGGTTCCCATACAGA | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHSSNRP*RGFPYR Trigger: TCTGTATGGGAACCCTCGTCACGGCCTATTGCTACT...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGTAGCAATAGGCCGTaGCGAGGGTTCCCATACAGA | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWSSNRP*RGFPYR Trigger: TCTGTATGGGAACCCTCGTCACGGCCTATTGCTACT...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACTTCCAGCCAGGTTCATaGTGGTTGACAACACAGCCC | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHFQPGS*WLTTQP Trigger: GGGCTGTGTTGTCAACCAGCATGAACCTGGCTGGAA...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAACAGGGCCAGTGTGCTaGGCCAGCTGTAGCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRTGPVC*ASCSSG Trigger: CCCAGAGCTACAGCTGGCGCAGCACACTGGCCCTGT...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGGCAGATCCTGTAGGGTaGTCTCCTCCTTTGATGAGC | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWADPVG*SPPLMS Trigger: GCTCATCAAAGGAGGAGAGCACCCTACAGGATCTGC...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACGGTAACCAGCTGCAATaGTTCCTACAAGGCCTCCGA | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHGNQLQ*FLQGLR Trigger: TCGGAGGCCTTGTAGGAAGCATTGCAGCTGGTTACC...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGGAGGAACATGGATGCTaGCATCCCAGCCATCATGAG | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWEEHGC*HPSHHE Trigger: CTCATGATGGCTGGGATGGCAGCATCCATGTTCCTC...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACCACCCAGAAGGCTGTaGTCCAGCTATAGTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRPPRRL*SSYSAW Trigger: CCAAGCACTATAGCTGGAGCACAGCCTTCTGGGTGG...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGTCCACAAACCACTTCTaGCACCCAGAAGGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWSTNHF*HPEGCA Trigger: AGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGA...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGACATGGCCGCAAATATaGCAGTGCGATAGTAGCCGT | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWTWPQI*QCDSSR Trigger: ACGGCTACTATCGCACTGTCATATTTGCGGCCATGT...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACGACCTCGAGGGCACTaGTGTAGGAGCTACCCACAA | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVRPRGH*CRSYPQ Trigger: TTGTGGGTAGCTCCTACATCAGTGCCCTCGAGGTCG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCAGTAGCAATAGGCCGTaGCGAGGGTTCCCATACAGA | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSSSNRP*RGFPYR Trigger: TCTGTATGGGAACCCTCGTCACGGCCTATTGCTACT...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTACAGGGCCAGTGTGCTaGGCCAGCTGTAGCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLITGPVC*ASCSSG Trigger: CCCAGAGCTACAGCTGGCGCAGCACACTGGCCCTGT...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAGACAACCACACACAGTaGCCCAGACAGGGCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVDNHTQ*PRQGQC Trigger: ACACTGGCCCTGTCTGGGGCACTGTGTGTGGTTGTC...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCGCAGATCCTGTAGGGTaGTCTCCTCCTTTGATGAGC | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSADPVG*SPPLMS Trigger: GCTCATCAAAGGAGGAGAGCACCCTACAGGATCTGC...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTCCCACAAGGGCGGACTaGCCTCGCTCCTGGATAAGG | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIPTRAD*PRSWIR Trigger: CCTTATCCAGGAGCGAGGGCAGTCCGCCCTTGTGGG...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGGAAGAGGAACATGGATaGTGCCATCCCAGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWEEEHG*CHPSHH Trigger: ATGATGGCTGGGATGGCAGCATCCATGTTCCTCTTC...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGATCCACAAACCACTTCTaGCACCCAGAAGGCTGTGCT | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRSTNHF*HPEGCA Trigger: AGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGA...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACCACCAAGTGCCAAACTaGGATGGCTCAAACCACTTC | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHHQVPN*DGSNHF Trigger: GAAGTGGTTTGAGCCATCCCAGTTTGGCACTTGGTG...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAGACTGCCCTCGCTCCTaGATAAGGAAGAACTGGCCC | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVDCPRS*IRKNWP Trigger: GGGCCAGTTCTTCCTTATCCAGGAGCGAGGGCAGTC...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGCCCTGCCTTCGCCATaGCCCTGTCTGACAGGTAAC | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRALPSP*PCLTGN Trigger: GTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGGTTCCACACAAGTTaGGAGGTGCACTCTCATTGG | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWRFHTS*EVHSHW Trigger: CCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCT...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGGTTCCACACAAGTTaGGAGGTGCACTCTCATTGG | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHRFHTS*EVHSHW Trigger: CCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCT...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCAGAAGGTTTTGCGGTTaGAATAGTACAGGCTGTAGC | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPRRFCG*NSTGCS Trigger: GCTACAGCCTGTACTATTTCAACCGCAAAACCTTCT...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | AACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGAAACGTAAAGCACTGTGGAGCTCCATaGGAAGACTACGTTGACCAG | + |
Preference number: 4 (lower is better) Translates to: NLQHHGGSERQWRHRNVKHCGAP*EDYVDQ Trigger: CTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTG...CTTTACGTTTCTGTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGTCCCACAATAGCATaGGAGGTTCCACACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWSPTIA*EVPHKL Trigger: CAACTTGTGTGGAACCTCTCATGCTATTGTGGGACT...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTCAGACAGGGCCAGTGTaGTGCGCCAGCTGTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIQTGPV*CASCSS Trigger: AGAGCTACAGCTGGCGCAGCACACTGGCCCTGTCTG...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTATTGATGAGCCCTTTTTaGCCTTGGAGGGGGCAGGGT | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVLMSPF*PWRGQG Trigger: ACCCTGCCCCCTCCAAGGGCAAAAAGGGCTCATCAA...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | AACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGAAACGTAAAGGCAGATCCTGTAGGGTaGTCTCCTCCTTTGATGAGC | + |
Preference number: 4 (lower is better) Translates to: NLQHHGGSERQWRHRNVKADPVG*SPPLMS Trigger: GCTCATCAAAGGAGGAGAGCACCCTACAGGATCTGC...CTTTACGTTTCTGTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | AACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGAAACGTAAAGGAGGAACATGGATGCTaGCATCCCAGCCATCATGAG | + |
Preference number: 4 (lower is better) Translates to: NLQHHGGSERQWRHRNVKEEHGC*HPSHHE Trigger: CTCATGATGGCTGGGATGGCAGCATCCATGTTCCTC...CTTTACGTTTCTGTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACACACAAGTTGGGAGGTaGACTCTCATTGGCTATGAC | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHTQVGR*TLIGYD Trigger: GTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGT...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACCACCCAGAAGGCTGTaGTCCAGCTATAGTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVPPRRL*SSYSAW Trigger: CCAAGCACTATAGCTGGAGCACAGCCTTCTGGGTGG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACTCGGCCCATCTTGGTaGGGATATTTCGAAGCAAGA | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRLGPSW*GYFEAR Trigger: TCTTGCTTCGAAATATCCGCACCAAGATGGGCCGAG...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCCTCGGCCCATCTTGGTaGGGATATTTCGAAGCAAGA | + |
Preference number: 4 (lower is better) Translates to: ALYILPFCPRVFMRVVDSLGPSW*GYFEAR Trigger: TCTTGCTTCGAAATATCCGCACCAAGATGGGCCGAG...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGCAAAGGCTGACACTGTaGAGCTCCATGAGAAGACTA | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWQRLTL*SSMRRL Trigger: TAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTTTG...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACAGCCAGGTTCATGCTaGTTGACAACACAGCCCACC | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVQPGSC*LTTQPT Trigger: GGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGACCACGAGGTAGCCAGTaGACAGCACCCAGAGATAGG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRPRGSQ*TAPRDR Trigger: CCTATCTCTGGGTGCTGTCCACTGGCTACCTCGTGG...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGTGGATAAGGAAGAACTaGCCCCAGTCTGTACAGCAA | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWWIRKN*PQSVQQ Trigger: TTGCTGTACAGACTGGGGCCAGTTCTTCCTTATCCA...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGACTGCCCTCGCTCCTaGATAAGGAAGAACTGGCCC | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRDCPRS*IRKNWP Trigger: GGGCCAGTTCTTCCTTATCCAGGAGCGAGGGCAGTC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTGCCCTGCCTTCGCCATaGCCCTGTCTGACAGGTAAC | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIALPSP*PCLTGN Trigger: GTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGC...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAAGGTTCCACACAAGTTaGGAGGTGCACTCTCATTGG | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRRFHTS*EVHSHW Trigger: CCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCT...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGATACTCGGCCCATCTTaGTGCGGATATTTCGAAGCA | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWILGPS*CGYFEA Trigger: TGCTTCGAAATATCCGCACCAAGATGGGCCGAGTAT...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACATACTCGGCCCATCTTaGTGCGGATATTTCGAAGCA | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHILGPS*CGYFEA Trigger: TGCTTCGAAATATCCGCACCAAGATGGGCCGAGTAT...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGAAGGTTTTGCGGTTaGAATAGTACAGGCTGTAGC | + |
Preference number: 4 (lower is better) Translates to: LATGNLQHHGGSERQWRHRRFCG*NSTGCS Trigger: GCTACAGCCTGTACTATTTCAACCGCAAAACCTTCT...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACCACCAAGGAGGGCATaGCAAAGGAGAAGGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVPPRRA*QRRRFC Trigger: GCAAAACCTTCTCCTTTGTCATGCCCTCCTTGGTGG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACACTGTGGAGCTCCATaGGAAGACTACGTTGACCAG | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVHCGAP*EDYVDQ Trigger: CTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCAGTCCCACAATAGCATaGGAGGTTCCACACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSSPTIA*EVPHKL Trigger: CAACTTGTGTGGAACCTCTCATGCTATTGTGGGACT...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTGACAACCACACACAGTaGCCCAGACAGGGCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIDNHTQ*PRQGQC Trigger: ACACTGGCCCTGTCTGGGGCACTGTGTGTGGTTGTC...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAACACAAGTTGGGAGGTaGACTCTCATTGGCTATGAC | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRTQVGR*TLIGYD Trigger: GTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGT...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGACCACCCAGAAGGCTGTaGTCCAGCTATAGTGCTTGG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRPPRRL*SSYSAW Trigger: CCAAGCACTATAGCTGGAGCACAGCCTTCTGGGTGG...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCCAAAGGCTGACACTGTaGAGCTCCATGAGAAGACTA | + |
Preference number: 4 (lower is better) Translates to: ALYILPFCPRVFMRVVDSQRLTL*SSMRRL Trigger: TAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTTTG...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGACAGCCAGGTTCATGCTaGTTGACAACACAGCCCACC | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRQPGSC*LTTQPT Trigger: GGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTG...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCTGGATAAGGAAGAACTaGCCCCAGTCTGTACAGCAA | + |
Preference number: 4 (lower is better) Translates to: ALYILPFCPRVFMRVVDSWIRKN*PQSVQQ Trigger: TTGCTGTACAGACTGGGGCCAGTTCTTCCTTATCCA...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCCTCCAAACAAGGCAATaGGACCATAAGAAGAGAAAC | + |
Preference number: 4 (lower is better) Translates to: VVDSSPPLGTEVLATILPLQTRQ*DHKKRN Trigger: GTTTCTCTTCTTATGGTCCCATTGCCTTGTTTGGAG...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCAGAAGACAACTGTGCTaGCTCCACAAACCACTTCTG | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSRRQLC*LHKPLL Trigger: CAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCT...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAACATGGCCGCAAATATaGCAGTGCGATAGTAGCCGT | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVTWPQI*QCDSSR Trigger: ACGGCTACTATCGCACTGTCATATTTGCGGCCATGT...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCAGAAGGTTTTGCGGTTaGAATAGTACAGGCTGTAGC | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSRRFCG*NSTGCS Trigger: GCTACAGCCTGTACTATTTCAACCGCAAAACCTTCT...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGACAGGTTCATGCTGGTTaGCAACACAGCCCACCAAGT | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRQVHAG*QHSPPS Trigger: ACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTG...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTTTGATGAGCCCTTTTTaGCCTTGGAGGGGGCAGGGT | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLILMSPF*PWRGQG Trigger: ACCCTGCCCCCTCCAAGGGCAAAAAGGGCTCATCAA...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGGTAACCAGCTGCAATaGTTCCTACAAGGCCTCCGA | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRGNQLQ*FLQGLR Trigger: TCGGAGGCCTTGTAGGAAGCATTGCAGCTGGTTACC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGAGGAACATGGATGCTaGCATCCCAGCCATCATGAG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMREEHGC*HPSHHE Trigger: CTCATGATGGCTGGGATGGCAGCATCCATGTTCCTC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTACTCGGCCCATCTTGGTaGGGATATTTCGAAGCAAGA | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVLGPSW*GYFEAR Trigger: TCTTGCTTCGAAATATCCGCACCAAGATGGGCCGAG...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCTCAGCAGGTTCATTGTaGATAAGCAGCAGACAGAAG | + |
Preference number: 4 (lower is better) Translates to: GDTLNSGVACLPEGRNRSSAGSL*ISSRQK Trigger: CTTCTGTCTGCTGCTTATCCACAATGAACCTGCTGA...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGCTCCAAACAAGGCAATaGGACCATAAGAAGAGAAAC | + |
Preference number: 4 (lower is better) Translates to: TSLATGNLQHHGGSERQWLQTRQ*DHKKRN Trigger: GTTTCTCTTCTTATGGTCCCATTGCCTTGTTTGGAG...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | AACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACAGAAACGTAAAGATACTCGGCCCATCTTaGTGCGGATATTTCGAAGCA | + |
Preference number: 4 (lower is better) Translates to: NLQHHGGSERQWRHRNVKILGPS*CGYFEA Trigger: TGCTTCGAAATATCCGCACCAAGATGGGCCGAGTAT...CTTTACGTTTCTGTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTGGTAACCAGCTGCAATaGTTCCTACAAGGCCTCCGA | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIGNQLQ*FLQGLR Trigger: TCGGAGGCCTTGTAGGAAGCATTGCAGCTGGTTACC...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGAAGAGGAACATGGATaGTGCCATCCCAGCCATCAT | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMREEEHG*CHPSHH Trigger: ATGATGGCTGGGATGGCAGCATCCATGTTCCTCTTC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR GCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTAACACAAGTTGGGAGGTaGACTCTCATTGGCTATGAC | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVTQVGR*TLIGYD Trigger: GTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGT...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACTCCAAACAAGGCAATaGGACCATAAGAAGAGAAAC | + |
Preference number: 4 (lower is better) Translates to: SLATGNLQHHGGSERQWRLQTRQ*DHKKRN Trigger: GTTTCTCTTCTTATGGTCCCATTGCCTTGTTTGGAG...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR TCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAAGTCCCACAATAGCATaGGAGGTTCCACACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRSPTIA*EVPHKL Trigger: CAACTTGTGTGGAACCTCTCATGCTATTGTGGGACT...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTCACCAAGTGCCAAACTaGGATGGCTCAAACCACTTC | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIHQVPN*DGSNHF Trigger: GAAGTGGTTTGAGCCATCCCAGTTTGGCACTTGGTG...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTATCAGCAGGTTCATTGTaGATAAGCAGCAGACAGAAG | + |
Preference number: 4 (lower is better) Translates to: HRPLILTRRSGPRRRRRVSAGSL*ISSRQK Trigger: CTTCTGTCTGCTGCTTATCCACAATGAACCTGCTGA...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGATGGATAAGGAAGAACTaGCCCCAGTCTGTACAGCAA | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRWIRKN*PQSVQQ Trigger: TTGCTGTACAGACTGGGGCCAGTTCTTCCTTATCCA...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAAGAAGACAACTGTGCTaGCTCCACAAACCACTTCTG | + |
Preference number: 4 (lower is better) Translates to: TSRFALYILPFCPRVFMRRRQLC*LHKPLL Trigger: CAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCT...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTCAAAGGCTGACACTGTaGAGCTCCATGAGAAGACTA | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIQRLTL*SSMRRL Trigger: TAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTTTG...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTAGAAGACAACTGTGCTaGCTCCACAAACCACTTCTG | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLIRRQLC*LHKPLL Trigger: CAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCT...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CCA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTTCAGCAGGTTCATTGTaGATAAGCAGCAGACAGAAG | + |
Preference number: 4 (lower is better) Translates to: EPNIIILNRAWDGSRDLISAGSL*ISSRQK Trigger: CTTCTGTCTGCTGCTTATCCACAATGAACCTGCTGA...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | CAGGAGCAGCCCAGAGGAGAAGAGCCAGCGGGCGCTCATCTGATCTaGCAGAACCCCGCTCACAAACTTGCTGATGGCGTAGGCTGCCGA | + |
Preference number: 5 (lower is better) Translates to: QEQPRGEEPAGAHLI*QNPAHKLADGVGCR Trigger: TCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCGGGGTTCTGTCAGATCAGATGAGCGCCCGCTGGCTCTTCTCCTCTGGGCTGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS GCA 90 bp | CTTGCTGATGGCGTAGGCTGCCGACTGGCTGCTTGTGATGAGCCCTaGAGCGAAGGGGAGCAGGGAGCAGGACACCCAAATCGTCCTTGT | + |
Preference number: 5 (lower is better) Translates to: LADGVGCRLAACDEP*SEGEQGAGHPNRPC Trigger: ACAAGGACGATTTGGGTGTCCTGCTCCCTGCTCCCCTTCGCTGCAGGGCTCATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215001.2 |
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CDS CCA 90 bp | GGCCGTGACGAGGGTTCCCATACAGAGACAGCCCTGCCTTCGCCATaGCCCTGTCTGACAGGTAACCAGCTGCAATGCTTCCTACAAGGC | + |
Preference number: 5 (lower is better) Translates to: GRDEGSHTETALPSP*PCLTGNQLQCFLQG Trigger: GCCTTGTAGGAAGCATTGCAGCTGGTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGCTGTCTCTGTATGGGAACCCTCGTCACGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | GAGCAGCAAAGGCTGACACTGTGGAGCTCCATGAGAAGACTACGTTaGCCAGACCAACCAGGAGCAGCCCAGAGGAGAAGAGCCAGCGGG | + |
Preference number: 5 (lower is better) Translates to: EQQRLTLWSSMRRLR*PDQPGAAQRRRASG Trigger: CCCGCTGGCTCTTCTCCTCTGGGCTGCTCCTGGTTGGTCTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTTTGCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | AGGGTTCCCATACAGAGACAGCCCTGCCTTCGCCATGGCCCTGTCTaGCAGGTAACCAGCTGCAATGCTTCCTACAAGGCCTCCGACCTC | + |
Preference number: 5 (lower is better) Translates to: RVPIQRQPCLRHGPV*QVTSCNASYKASDL Trigger: GAGGTCGGAGGCCTTGTAGGAAGCATTGCAGCTGGTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGCTGTCTCTGTATGGGAACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | AACATGGATGCTGCCATCCCAGCCATCATGAGTAGCAATAGGCCGTaGCGAGGGTTCCCATACAGAGACAGCCCTGCCTTCGCCATGGCC | + |
Preference number: 5 (lower is better) Translates to: NMDAAIPAIMSSNRP*RGFPYRDSPAFAMA Trigger: GGCCATGGCGAAGGCAGGGCTGTCTCTGTATGGGAACCCTCGTCACGGCCTATTGCTACTCATGATGGCTGGGATGGCAGCATCCATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 90 bp | CTACCCACAAGGGCGGACTGCCCTCGCTCCTGGATAAGGAAGAACTaGCCCCAGTCTGTACAGCAAGTCTTTACTCCGAAGACCACGAGG | + |
Preference number: 5 (lower is better) Translates to: LPTRADCPRSWIRKN*PQSVQQVFTPKTTR Trigger: CCTCGTGGTCTTCGGAGTAAAGACTTGCTGTACAGACTGGGGCCAGTTCTTCCTTATCCAGGAGCGAGGGCAGTCCGCCCTTGTGGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGGAGCCCTTTTTGCCCTaGGAGGGGGCAGGGTCCAGA | + |
Preference number: 5 (lower is better) Translates to: TSLATGNLQHHGGSERQWEPFLP*EGAGSR Trigger: TCTGGACCCTGCCCCCTCCAAGGGCAAAAAGGGCTC...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | CCGTTACTCGGAAGAGGAACATGGATGCTGCCATCCCAGCCATCATaGGTAGCAATAGGCCGTGACGAGGGTTCCCATACAGAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: PLLGRGTWMLPSQPS*VAIGRDEGSHTETA Trigger: GGCTGTCTCTGTATGGGAACCCTCGTCACGGCCTATTGCTACTCATGATGGCTGGGATGGCAGCATCCATGTTCCTCTTCCGAGTAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAGAGCCCTTTTTGCCCTaGGAGGGGGCAGGGTCCAGA | + |
Preference number: 5 (lower is better) Translates to: SLATGNLQHHGGSERQWREPFLP*EGAGSR Trigger: TCTGGACCCTGCCCCCTCCAAGGGCAAAAAGGGCTC...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 90 bp | ATCCAGATCTCATGCTCCGTAAAGCCTGTGAGCTCAGCCAGAGGATaGAGAGCAGGAGTCCAGAAAGCATCCTTGGGTGAGTCACTGGTC | + |
Preference number: 5 (lower is better) Translates to: IQISCSVKPVSSARG*RAGVQKASLGESLV Trigger: GACCAGTGACTCACCCAAGGATGCTTTCTGGACTCCTGCTCTCCATCCTCTGGCTGAGCTCACAGGCTTTACGGAGCATGAGATCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213268.2 |
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CDS-3UTR CAA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCACCAGGATCCAGATCTaGGGTGAGTCACTGGTCACC | + |
Preference number: 5 (lower is better) Translates to: VVDSSPPLGTEVLATILPTRIQI*GESLVT Trigger: GGTGACCAGTGACTCACCCAAGATCTGGATCCTGGT...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | CGTTGCCAAGATAGGTCCCAAACTTCCAGCCAGGTTCATGCTGGTTaGCAACACAGCCCACCAAGTGCCAAACTGGGATGGCTCAAACCA | + |
Preference number: 5 (lower is better) Translates to: RCQDRSQTSSQVHAG*QHSPPSAKLGWLKP Trigger: TGGTTTGAGCCATCCCAGTTTGGCACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTGGAAGTTTGGGACCTATCTTGGCAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 90 bp | AACTTCCAGCCAGGTTCATGCTGGTTGACAACACAGCCCACCAAGTaGCAAACTGGGATGGCTCAAACCACTTCCTCAGGATCTTCCCAC | + |
Preference number: 5 (lower is better) Translates to: NFQPGSCWLTTQPTK*QTGMAQTTSSGSSH Trigger: GTGGGAAGATCCTGAGGAAGTGGTTTGAGCCATCCCAGTTTGGCACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTGGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 90 bp | CCATCTTGGTGCGGATATTTCGAAGCAAGAAGAAGACAACTGTGCTaGCTCCACAAACCACTTCTGCCACCCAGAAGGCTGTGCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: PSWCGYFEARRRQLC*LHKPLLPPRRLCSS Trigger: GCTGGAGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCTTCTTGCTTCGAAATATCCGCACCAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACGGGTGCTCTCCTCCTTaGATGAGCCCTTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: LATGNLQHHGGSERQWRHGCSPP*MSPFCP Trigger: AGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCC...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCGAGGTTCCACACAAGTaGGGAGGTGCACTCTCATTG | + |
Preference number: 5 (lower is better) Translates to: VVDSSPPLGTEVLATILPEVPHK*GGALSL Trigger: CAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTC...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 90 bp | TCGAAGCAAGAAGAAGACAACTGTGCTGGCTCCACAAACCACTTCTaGCACCCAGAAGGCTGTGCTCCAGCTATAGTGCTTGGCAATGGT | + |
Preference number: 5 (lower is better) Translates to: SKQEEDNCAGSTNHF*HPEGCAPAIVLGNG Trigger: ACCATTGCCAAGCACTATAGCTGGAGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCTTCTTGCTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGTGGTGGACTCCGGGTGCTCTCCTCCTTaGATGAGCCCTTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: ALYILPFCPRVFMRVVDSGCSPP*MSPFCP Trigger: AGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCC...GGAGTCCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GGAGACACTCTGAATTCAGGAGTTGCCTGTCTGCCAGAAGGTAGAAACAGAAGCACCAGGATCCAGATCTaGGGTGAGTCACTGGTCACC | + |
Preference number: 5 (lower is better) Translates to: GDTLNSGVACLPEGRNRSTRIQI*GESLVT Trigger: GGTGACCAGTGACTCACCCAAGATCTGGATCCTGGT...GCTTCTGTTTCTACCTTCTGGCAGACAGGCAACTCCTGAATTCAGAGTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCGGAGGTGCACTCTCATaGGCTATGACTCCAAACAAG | + |
Preference number: 5 (lower is better) Translates to: VVDSSPPLGTEVLATILPGGALS*AMTPNK Trigger: CTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCC...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | ACCTCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGGAGGTTCCACACAAGTaGGGAGGTGCACTCTCATTG | + |
Preference number: 5 (lower is better) Translates to: TSLATGNLQHHGGSERQWEVPHK*GGALSL Trigger: CAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTC...CCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | TTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGACACGATACTCGGCCCATCTaGGTGCGGATATTTCGAAGC | + |
Preference number: 5 (lower is better) Translates to: LATGNLQHHGGSERQWRHDTRPI*VRIFRS Trigger: GCTTCGAAATATCCGCACCAAGATGGGCCGAGTATC...GTGTCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | CCAGCCAGAAATCCACCCACATTGGCCATAAGTCCCACAATAGCATaGGAGGTTCCACACAAGTTGGGAGGTGCACTCTCATTGGCTATG | + |
Preference number: 5 (lower is better) Translates to: PARNPPTLAISPTIA*EVPHKLGGALSLAM Trigger: CATAGCCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTCTCATGCTATTGTGGGACTTATGGCCAATGTGGGTGGATTTCTGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GTGGTGGACTCCTCTCCTCCCTTAGGGACTGAGGTATTGGCAACAATTTTGCCCACATCAGCAGGTTCATaGTGGATAAGCAGCAGACAG | + |
Preference number: 5 (lower is better) Translates to: VVDSSPPLGTEVLATILPTSAGS*WISSRQ Trigger: CTGTCTGCTGCTTATCCACAATGAACCTGCTGATGT...GGGCAAAATTGTTGCCAATACCTCAGTCCCTAAGGGAGGAGAGGAGTCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | CACAGGCCATTAATACTCACTAGGAGATCAGGACCTAGGAGAAGAAGAAGGGTATTTGATGAGCCCTTTTaGCCCTTGGAGGGGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: HRPLILTRRSGPRRRRRVFDEPF*PLEGAG Trigger: CCCTGCCCCCTCCAAGGGCAAAAAGGGCTCATCAAA...TACCCTTCTTCTTCTCCTAGGTCCTGATCTCCTAGTGAGTATTAATGGCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAGGAGGTGCACTCTCATaGGCTATGACTCCAAACAAG | + |
Preference number: 5 (lower is better) Translates to: SLATGNLQHHGGSERQWRGGALS*AMTPNK Trigger: CTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCC...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | TCATTAGCCACTGGTAACTTGCAGCACCATGGAGGTTCAGAGAGACAGTGGAGAACATCAGCAGGTTCATaGTGGATAAGCAGCAGACAG | + |
Preference number: 5 (lower is better) Translates to: SLATGNLQHHGGSERQWRTSAGS*WISSRQ Trigger: CTGTCTGCTGCTTATCCACAATGAACCTGCTGATGT...TCTCCACTGTCTCTCTGAACCTCCATGGTGCTGCAAGTTACCAGTGGCTAATGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGGGTGCTCTCCTCCTTaGATGAGCCCTTTTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: TSRFALYILPFCPRVFMRGCSPP*MSPFCP Trigger: AGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 90 bp | CATAAGTCCCACAATAGCATGAGAGGTTCCACACAAGTTGGGAGGTaGACTCTCATTGGCTATGACTCCAAACAAGGCAATGGGACCATA | + |
Preference number: 5 (lower is better) Translates to: HKSHNSMRGSTQVGR*TLIGYDSKQGNGTI Trigger: TATGGTCCCATTGCCTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTCTCATGCTATTGTGGGACTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGAGGTTCCACACAAGTaGGGAGGTGCACTCTCATTG | + |
Preference number: 5 (lower is better) Translates to: TSRFALYILPFCPRVFMREVPHK*GGALSL Trigger: CAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | ACAAGTCGGTTTGCCCTCTATATTCTTCCCTTTTGTCCCAGGGTATTCATGAGAGATACTCGGCCCATCTaGGTGCGGATATTTCGAAGC | + |
Preference number: 5 (lower is better) Translates to: TSRFALYILPFCPRVFMRDTRPI*VRIFRS Trigger: GCTTCGAAATATCCGCACCAAGATGGGCCGAGTATC...TCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCAAACCGACTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 90 bp | CATGAGAGGTTCCACACAAGTTGGGAGGTGCACTCTCATTGGCTATaGCTCCAAACAAGGCAATGGGACCATAAGAAGAGAAACCAAACA | + |
Preference number: 5 (lower is better) Translates to: HERFHTSWEVHSHWL*LQTRQWDHKKRNQT Trigger: TGTTTGGTTTCTCTTCTTATGGTCCCATTGCCTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTCTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS-3UTR CAA 90 bp | GAACCAAACATCATCATTTTAAATAGAGCATGGGATGGGAGTCGGGACCTCATTACATCAGCAGGTTCATaGTGGATAAGCAGCAGACAG | + |
Preference number: 5 (lower is better) Translates to: EPNIIILNRAWDGSRDLITSAGS*WISSRQ Trigger: CTGTCTGCTGCTTATCCACAATGAACCTGCTGATGT...AATGAGGTCCCGACTCCCATCCCATGCTCTATTTAAAATGATGATGTTTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165839.3 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CAA 90 bp | GCCCTGCAGCGAAGGGGAGCAGGGAGCAGGACACCCAAATCGTCCTaGTCCAGAGCGATCTCATCCACCAAGGAGGGCATGACAAAGGAG | + |
Preference number: 6 (lower is better) Translates to: ALQRRGAGSRTPKSS*SRAISSTKEGMTKE Trigger: CTCCTTTGTCATGCCCTCCTTGGTGGATGAGATCGCTCTGGACAAGGACGATTTGGGTGTCCTGCTCCCTGCTCCCCTTCGCTGCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215001.2 |
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CDS GCA 72 bp | CAGAACCCCGCTCACAAACTTGCTGATGGCGTAGGCTaGCGACTGGCTGCTTGTGATGAGCCCTGCAGCGAA | + |
Preference number: 6 (lower is better) Translates to: QNPAHKLADGVG*RLAACDEPCSE Trigger: TTCGCTGCAGGGCTCATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCGGGGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215001.2 |
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CDS CAA 72 bp | CGAAGGGGAGCAGGGAGCAGGACACCCAAATCGTCCTaGTCCAGAGCGATCTCATCCACCAAGGAGGGCATG | + |
Preference number: 6 (lower is better) Translates to: RRGAGSRTPKSS*SRAISSTKEGM Trigger: CATGCCCTCCTTGGTGGATGAGATCGCTCTGGACAAGGACGATTTGGGTGTCCTGCTCCCTGCTCCCCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215001.2 |
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CDS CAA 90 bp | AGAGCAGCAAAGGCTGACACTGTGGAGCTCCATGAGAAGACTACGTaGACCAGACCAACCAGGAGCAGCCCAGAGGAGAAGAGCCAGCGG | + |
Preference number: 6 (lower is better) Translates to: RAAKADTVELHEKTT*TRPTRSSPEEKSQR Trigger: CCGCTGGCTCTTCTCCTCTGGGCTGCTCCTGGTTGGTCTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTTTGCTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | CCCAGAGGAGAAGAGCCAGCGGGCGCTCATCTGATCTaGCAGAACCCCGCTCACAAACTTGCTGATGGCGTA | + |
Preference number: 6 (lower is better) Translates to: PRGEEPAGAHLI*QNPAHKLADGV Trigger: TACGCCATCAGCAAGTTTGTGAGCGGGGTTCTGTCAGATCAGATGAGCGCCCGCTGGCTCTTCTCCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215001.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | AGCAGCCCAGAGGAGAAGAGCCAGCGGGCGCTCATCTaGTCTGACAGAACCCCGCTCACAAACTTGCTGATG | + |
Preference number: 6 (lower is better) Translates to: SSPEEKSQRALI*SDRTPLTNLLM Trigger: CATCAGCAAGTTTGTGAGCGGGGTTCTGTCAGATCAGATGAGCGCCCGCTGGCTCTTCTCCTCTGGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215001.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | GCTGCCATCCCAGCCATCATGAGTAGCAATAGGCCGTaGCGAGGGTTCCCATACAGAGACAGCCCTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: AAIPAIMSSNRP*RGFPYRDSPAF Trigger: GAAGGCAGGGCTGTCTCTGTATGGGAACCCTCGTCACGGCCTATTGCTACTCATGATGGCTGGGATGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | CAGAACCCCGCTCACAAACTTGCTGATGGCGTAGGCTaGCGACTGGCTGCTTGTGATGAGCCCCAAATCGTC | + |
Preference number: 6 (lower is better) Translates to: QNPAHKLADGVG*RLAACDEPQIV Trigger: GACGATTTGGGGCTCATCACAAGCAGCCAGTCGGCAGCCTACGCCATCAGCAAGTTTGTGAGCGGGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | GAGGGTTCCCATACAGAGACAGCCCTGCCTTCGCCATaGCCCTGTCTGACAGGTAACCAGCTGCAATGCTTC | + |
Preference number: 6 (lower is better) Translates to: EGSHTETALPSP*PCLTGNQLQCF Trigger: GAAGCATTGCAGCTGGTTACCTGTCAGACAGGGCCATGGCGAAGGCAGGGCTGTCTCTGTATGGGAACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CAA 72 bp | GCCGACTGGCTGCTTGTGATGAGCCCCAAATCGTCCTaGTCCAGAGCGATCTCATCCACCAAGGAGGGCATG | + |
Preference number: 6 (lower is better) Translates to: ADWLLVMSPKSS*SRAISSTKEGM Trigger: CATGCCCTCCTTGGTGGATGAGATCGCTCTGGACAAGGACGATTTGGGGCTCATCACAAGCAGCCAGTCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | TGTGCTGCGCCAGCTGTAGCTCTGGGCGAGGATCGTTaGCAAGATAGGTCCCAAACTTCCAGCCAGGTTCAT | + |
Preference number: 6 (lower is better) Translates to: CAAPAVALGEDR*QDRSQTSSQVH Trigger: ATGAACCTGGCTGGAAGTTTGGGACCTATCTTGGCAACGATCCTCGCCCAGAGCTACAGCTGGCGCAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | CCCAGAGATAGGGGGACAGCAGCAGATCCTGTAGGGTaGTCTCCTCCTTTGATGAGCCCTTTTTGCCCTTGG | + |
Preference number: 6 (lower is better) Translates to: PRDRGTAADPVG*SPPLMSPFCPW Trigger: CCAAGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCCTACAGGATCTGCTGCTGTCCCCCTATCTCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | GGGTGCTCTCCTCCTTTGATGAGCCCTTTTTGCCCTTaGAGGGGGCAGGGTCCAGATTTCGGAGTCCAACAT | + |
Preference number: 6 (lower is better) Translates to: GCSPPLMSPFCP*RGQGPDFGVQH Trigger: ATGTTGGACTCCGAAATCTGGACCCTGCCCCCTCCAAGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | AGGGCGGACTGCCCTCGCTCCTGGATAAGGAAGAACTaGCCCCAGTCTGTACAGCAAGTCTTTACTCCGAAG | + |
Preference number: 6 (lower is better) Translates to: RADCPRSWIRKN*PQSVQQVFTPK Trigger: CTTCGGAGTAAAGACTTGCTGTACAGACTGGGGCCAGTTCTTCCTTATCCAGGAGCGAGGGCAGTCCGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CAA 72 bp | AGGGTGCTCTCCTCCTTTGATGAGCCCTTTTTGCCCTaGGAGGGGGCAGGGTCCAGATTTCGGAGTCCAACA | + |
Preference number: 6 (lower is better) Translates to: RVLSSFDEPFLP*EGAGSRFRSPT Trigger: TGTTGGACTCCGAAATCTGGACCCTGCCCCCTCCAAGGGCAAAAAGGGCTCATCAAAGGAGGAGAGCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | AGGCTGACACTGTGGAGCTCCATGAGAAGACTACGTTaGCCAGACCAACCAGGAGCAGCCCAGAGGAGAAGA | + |
Preference number: 6 (lower is better) Translates to: RLTLWSSMRRLR*PDQPGAAQRRR Trigger: TCTTCTCCTCTGGGCTGCTCCTGGTTGGTCTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTGTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CAA 72 bp | AAGGCTGACACTGTGGAGCTCCATGAGAAGACTACGTaGACCAGACCAACCAGGAGCAGCCCAGAGGAGAAG | + |
Preference number: 6 (lower is better) Translates to: KADTVELHEKTT*TRPTRSSPEEK Trigger: CTTCTCCTCTGGGCTGCTCCTGGTTGGTCTGGTCAACGTAGTCTTCTCATGGAGCTCCACAGTGTCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | AGTACAGGCTGTAGCCTCCAAACATGGCCGCAAATATaGCAGTGCGATAGTAGCCGTAGCCTTGGGCTGCCA | + |
Preference number: 6 (lower is better) Translates to: STGCSLQTWPQI*QCDSSRSLGLP Trigger: TGGCAGCCCAAGGCTACGGCTACTATCGCACTGTCATATTTGCGGCCATGTTTGGAGGCTACAGCCTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215001.2 ENSMUST00000215121.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | GATAGGTCCCAAACTTCCAGCCAGGTTCATGCTGGTTaGCAACACAGCCCACCAAGTGCCAAACTGGGATGG | + |
Preference number: 6 (lower is better) Translates to: DRSQTSSQVHAG*QHSPPSAKLGW Trigger: CCATCCCAGTTTGGCACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTGGCTGGAAGTTTGGGACCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | CCAGGTTCATGCTGGTTGACAACACAGCCCACCAAGTaGCAAACTGGGATGGCTCAAACCACTTCCTCAGGA | + |
Preference number: 6 (lower is better) Translates to: PGSCWLTTQPTK*QTGMAQTTSSG Trigger: TCCTGAGGAAGTGGTTTGAGCCATCCCAGTTTGGCACTTGGTGGGCTGTGTTGTCAACCAGCATGAACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | GAAGAAGACAACTGTGCTGGCTCCACAAACCACTTCTaGCACCCAGAAGGCTGTGCTCCAGCTATAGTGCTT | + |
Preference number: 6 (lower is better) Translates to: EEDNCAGSTNHF*HPEGCAPAIVL Trigger: AAGCACTATAGCTGGAGCACAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | ATGCTGGTTGACAACACAGCCCACCAAGTGCCAAACTaGGATGGCTCAAACCACTTCCTCAGGATCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: MLVDNTAHQVPN*DGSNHFLRIFP Trigger: TGGGAAGATCCTGAGGAAGTGGTTTGAGCCATCCCAGTTTGGCACTTGGTGGGCTGTGTTGTCAACCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | TGCGGATATTTCGAAGCAAGAAGAAGACAACTGTGCTaGCTCCACAAACCACTTCTGCCACCCAGAAGGCTG | + |
Preference number: 6 (lower is better) Translates to: CGYFEARRRQLC*LHKPLLPPRRL Trigger: CAGCCTTCTGGGTGGCAGAAGTGGTTTGTGGAGCCAGCACAGTTGTCTTCTTCTTGCTTCGAAATATCCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | AATCCACCCACATTGGCCATAAGTCCCACAATAGCATaGGAGGTTCCACACAAGTTGGGAGGTGCACTCTCA | + |
Preference number: 6 (lower is better) Translates to: NPPTLAISPTIA*EVPHKLGGALS Trigger: TGAGAGTGCACCTCCCAACTTGTGTGGAACCTCTCATGCTATTGTGGGACTTATGGCCAATGTGGGTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CAA 72 bp | GGGTCCAGATTTCGGAGTCCAACATCAGCAGGTTCATaGTGGATAAGCAGCAGACAGAAGAAGGAGACAACC | + |
Preference number: 6 (lower is better) Translates to: GSRFRSPTSAGS*WISSRQKKETT Trigger: GGTTGTCTCCTTCTTCTGTCTGCTGCTTATCCACAATGAACCTGCTGATGTTGGACTCCGAAATCTGGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS TCA 72 bp | TTCCACACAAGTTGGGAGGTGCACTCTCATTGGCTATaGCTCCAAACAAGGCAATGGGACCATAAGAAGAGA | + |
Preference number: 6 (lower is better) Translates to: FHTSWEVHSHWL*LQTRQWDHKKR Trigger: TCTCTTCTTATGGTCCCATTGCCTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS GCA 72 bp | CACAATAGCATGAGAGGTTCCACACAAGTTGGGAGGTaGACTCTCATTGGCTATGACTCCAAACAAGGCAAT | + |
Preference number: 6 (lower is better) Translates to: HNSMRGSTQVGR*TLIGYDSKQGN Trigger: ATTGCCTTGTTTGGAGTCATAGCCAATGAGAGTGCACCTCCCAACTTGTGTGGAACCTCTCATGCTATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |
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CDS CCA 72 bp | TCCAGATTTCGGAGTCCAACATCAGCAGGTTCATTGTaGATAAGCAGCAGACAGAAGAAGGAGACAACCACA | + |
Preference number: 6 (lower is better) Translates to: SRFRSPTSAGSL*ISSRQKKETTT Trigger: TGTGGTTGTCTCCTTCTTCTGTCTGCTGCTTATCCACAATGAACCTGCTGATGTTGGACTCCGAAATCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165839.3 ENSMUST00000213268.2 ENSMUST00000213388.2 ENSMUST00000215420.2 |