Pregenerated sensors for SLC36A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043885Ensembl transcript IDs: ENSMUST00000061568.9, ENSMUST00000115588.8, ENSMUST00000214954.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGGAAGAGAGGAGAGGCTGTGGGGCATCCTCCAGATTGATGATTaGTCTGAGAGGGCTATGCCCACTGTGGGCGGCACCACCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: FGREERLWGILQIDD*SERAMPTVGGTTPG Trigger: CCCAGGGGTGGTGCCGCCCACAGTGGGCATAGCCCTCTCAGAGCAATCATCAATCTGGAGGATGCCCCACAGCCTCTCCTCTCTTCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR TCA 90 bp | AGGGCAGCAATGTTCCAGGTCCTCACTGGCCCTTTCACCTACGGCTaGAAGAGGAAGTCAGAACCTTGTCAGTGCTTCCCAGTGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RAAMFQVLTGPFTYG*KRKSEPCQCFPVLL Trigger: GAGGAGCACTGGGAAGCACTGACAAGGTTCTGACTTCCTCTTTCAGCCGTAGGTGAAAGGGCCAGTGAGGACCTGGAACATTGCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR TCA 90 bp | CAGCACACCCTACAGCAAGCCAGTCTCCTGCTGTATAAAAGACTGTaGGCTTCTTTCCCTGTTTGGGATCTATGGAGCCACCAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: QHTLQQASLLLYKRL*ASFPVWDLWSHQAG Trigger: ACCTGCCTGGTGGCTCCATAGATCCCAAACAGGGAAAGAAGCTCACAGTCTTTTATACAGCAGGAGACTGGCTTGCTGTAGGGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR TCA 90 bp | GGAGGGAAAGAGCCTGTGTTAAAAAGTCCTGTGGGAACAGTGTTTTaGGTGGACTCAGACACCAATGCATTCCTCGGAGCATCAGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GGKEPVLKSPVGTVF*VDSDTNAFLGASGN Trigger: GTTCCCTGATGCTCCGAGGAATGCATTGGTGTCTGAGTCCACTCAAAACACTGTTCCCACAGGACTTTTTAACACAGGCTCTTTCCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR TCA 90 bp | AAAAATAAACTGAGCATGCCGAGTAGAACACACCGTGAACACAGCTaGCAAAGAGCCACATGCTGCTTCCTGGGCGGGGAGTTTGTAACT | + |
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Preference number: 1 (lower is better) Translates to: KNKLSMPSRTHREHS*QRATCCFLGGEFVT Trigger: AGTTACAAACTCCCCGCCCAGGAAGCAGCATGTGGCTCTTTGTCAGCTGTGTTCACGGTGTGTTCTACTCGGCATGCTCAGTTTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR GCA 90 bp | AGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTaGCGTAGTCGGATAAATAATTTCTTCAACAGTGACATAGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: RVHIQKGTLGGASNN*RSRINNFFNSDIGA Trigger: GGCACCTATGTCACTGTTGAAGAAATTATTTATCCGACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
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| 3UTR TCA 90 bp | AACACTTTAAGTACACCATCTAACAAGACTCAGAGCCAGCTTTGGTaGCAGGTCAGAAAGAACAGAACAGGAAAGTACTGGAGCACCACA | + |
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Preference number: 1 (lower is better) Translates to: NTLSTPSNKTQSQLW*QVRKNRTGKYWSTT Trigger: TGTGGTGCTCCAGTACTTTCCTGTTCTGTTCTTTCTGACCTGTCACCAAAGCTGGCTCTGAGTCTTGTTAGATGGTGTACTTAAAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR GCA 90 bp | AGGTCAGAACCAACGAGATGCAGAAAGTCATGTATGGCAGTAACATaGAGCCATTTAATGACCGGAAGAATCCTGTTATCTGCACTAGAT | + |
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Preference number: 1 (lower is better) Translates to: RSEPTRCRKSCMAVT*SHLMTGRILLSALD Trigger: ATCTAGTGCAGATAACAGGATTCTTCCGGTCATTAAATGGCTGCATGTTACTGCCATACATGACTTTCTGCATCTCGTTGGTTCTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CCA 90 bp | GCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACCTaGGGACTTTCATATGAGCTGTTGATTCAGCAGCCTTCCTCCATA | + |
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Preference number: 1 (lower is better) Translates to: AYLPFCIVTPLVLIT*GLSYELLIQQPSSI Trigger: TATGGAGGAAGGCTGCTGAATCAACAGCTCATATGAAAGTCCCCAGGTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGGCTATGCCCACTGTGGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTTCCAGGTTCCTGCCTTaGGTTCCTGTCCTGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ERAMPTVGGTTPGLVALCSRFLP*VPVLTS Trigger: GGAAGTCAGGACAGGAACTCAAGGCAGGAACCTGGA...ACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCACAGTGGGCATAGCCCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGGGGCCTCACCTCCTGTaGCCTCTGCCCTACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGGPHLL*PLPYST Trigger: TGTGCTGTAGGGCAGAGGTCACAGGAGGTGAGGCCC...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | GGAGTCATTTTGGAAGAGAGGAGAGGCTGTGGGGCATCCTCCAGATaGATGATTGCTCTGAGAGGGCTATGCCCACTGTGGGCGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GVILEERRGCGASSR*MIALRGLCPLWAAP Trigger: TGGTGCCGCCCACAGTGGGCATAGCCCTCTCAGAGCAATCATCAATCTGGAGGATGCCCCACAGCCTCTCCTCTCTTCCAAAATGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGCAAACACGAGTTCGCCATGTGTGCCTGCTTCCCCTCCCTCCAAGTCCCTCTTCAGCATCAGATaGGCCTGGTTGCTTTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: DPANTSSPCVPASPPSKSLFSIR*AWLLWL Trigger: TAGCCAAAGCAACCAGGCTCATCTGATGCTGAAGAG...GGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | GATCCAGCAAACACGAGTTCGCCATGTGTGCCTGCTTCCCCTCCCTCCAAGTCCCTTGAGTTCCTGTCCTaGCTTCCCTTGATGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: DPANTSSPCVPASPPSKSLEFLS*LPLMMD Trigger: ATCCATCATCAAGGGAAGTCAGGACAGGAACTCAAG...GGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | GATCCAGCAAACACGAGTTCGCCATGTGTGCCTGCTTCCCCTCCCTCCAAGTCCGACTGCAGTAAGGAATaGTACATGGCTAGGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: DPANTSSPCVPASPPSKSDCSKE*YMARKS Trigger: GGATTTCCTAGCCATGTAGCATTCCTTACTGCAGTC...GGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGTGTTTGAAGACAGGGTaGAGGCCACATCTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGCLKTG*RPHLSG Trigger: TCCAGAGAGATGTGGCCTTCACCCTGTCTTCAAACA...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTGCTGTAAGAAAGCAGGCTTTTGCTATTGTGGGGTaGTTCAAAGAGGTTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: VGGTTPGLVALCAVRKQAFAIVG*FKEVFK Trigger: TTTAAAAACCTCTTTGAAGCACCCCACAATAGCAAA...AGCCTGCTTTCTTACAGCACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGATGACAGGAAGTAACTaGTGGGGTCACTGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGMTGSN*WGHCSH Trigger: GTGACTGCAGTGACCCCAGCAGTTACTTCCTGTCAT...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | GTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACATCAGGGCTAGTGTACTaGTGCTCACAGCCCCCACGA | + |
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Preference number: 2 (lower is better) Translates to: VMHVEFTFRKGLWEVPATSGLVY*CSQPPR Trigger: TCGTGGGGGCTGTGAGCAGCAGTACACTAGCCCTGA...TGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGGCTTCTTTCCCTGTTTaGGATCTATGGAGCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGASFPV*DLWSHQ Trigger: CTGGTGGCTCCATAGATCCCAAACAGGGAAAGAAGC...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | AAACTCCCCAGTTCTCCTCTTCAGCATCAGATGAGCCTGGTTGCTTaGGCTAGTGTGTTTGAAGACAGGGTGAAGGCCACATCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KLPSSPLQHQMSLVA*ASVFEDRVKATSLW Trigger: CCAGAGAGATGTGGCCTTCACCCTGTCTTCAAACACACTAGCCAAAGCAACCAGGCTCATCTGATGCTGAAGAGGAGAACTGGGGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGTTTCATATGAGCTGTTaGTTCAGCAGCCTTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGFHMSC*FSSLPP Trigger: TGGAGGAAGGCTGCTGAATCAACAGCTCATATGAAA...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR CCA 90 bp | AATACGTCCTCAGACACCCTTAAACAAGTGTGTGTTTCTTTTATACTTTGCATAGGGCGGCACCACCCCTaGGCTGGTTGCCCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NTSSDTLKQVCVSFILCIGRHHP*AGCPVC Trigger: GCACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCC...TATGCAAAGTATAAAAGAAACACACACTTGTTTAAGGGTGTCTGAGGACGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTGCCGTAGTGGTGCCAGCAACAACTaGCGTAGTCGGATAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: RVHIQKGTLGGASNNCRSGASNN*RSRINN Trigger: ATTATTTATCCGACTACGGCAGTTGTTGCTGGCACC...ACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGGTCCTTAGAAAATGTAAGGATTTCCACAAGTGGGGGCAGGATCAGGGCGCACTGTTCAGTGTATaGGGAAGCACTGTAGTCGTT | + |
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Preference number: 2 (lower is better) Translates to: VVVLRKCKDFHKWGQDQGALFSV*GSTVVV Trigger: AACGACTACAGTGCTTCCCCATACACTGAACAGTGC...GCCCTGATCCTGCCCCCACTTGTGGAAATCCTTACATTTTCTAAGGACCACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCTTCAGAAAGGGACTCTaGGAGGTGCCAGCAACAACT | + |
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Preference number: 2 (lower is better) Translates to: TTCYACRVHIQKGTLGGAFRKGL*EVPATT Trigger: AGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAA...GGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACGCTCTGAGAGGGCTATaGCCACTGTGGGCGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHALRGL*PLWAAP Trigger: TGGTGCCGCCCACAGTGGGCATAGCCCTCTCAGAGC...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGGCTCTGGGAACTATCTAATGCTTGCACGGTGGTCAGCTGGAGTCTACTGTACTTTGCTATTGTaGGGTGCTTCAAAGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ASGSGNYLMLARWSAGVYCTLLL*GASKRF Trigger: AAACCTCTTTGAAGCACCCCACAATAGCAAAGTACA...GTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGTCCCCAAACAAAAGGAAGAGCTGCTAGAGTCAACATATCTTCTCCAAAAGATGTCCAGGAGATaGCCCCGCTCAGTCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LQVPKQKEELLESTYLLQKMSRR*PRSVLQ Trigger: TTGAAGGACTGAGCGGGGCCATCTCCTGGACATCTT...TTGGAGAAGATATGTTGACTCTAGCAGCTCTTCCTTTTGTTTGGGGACTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | TCAGACACCAATGCATTCCTCGGAGCATCAGGGAACAGAGAGCCATaGGGAGTAAGCAACAGCTTTCTTCTCAATGCTTCACAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SDTNAFLGASGNREP*GVSNSFLLNASQRK Trigger: TTTTCTCTGTGAAGCATTGAGAAGAAAGCTGTTGCTTACTCCCAATGGCTCTCTGTTCCCTGATGCTCCGAGGAATGCATTGGTGTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | ACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCGGTGCCAGCAACAACTaGCGTAGTCGGATAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: TTCYACRVHIQKGTLGGAGASNN*RSRINN Trigger: ATTATTTATCCGACTACGGCAGTTGTTGCTGGCACC...GGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAGGTGCCCAACAAGAAGCCCACGACTCCAGTGAACGCTATGGAAATGTTCAAAAACTAGGAGTTTaGCACTGTTCAGTGTATGGG | + |
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Preference number: 2 (lower is better) Translates to: DIGAQQEAHDSSERYGNVQKLGV*HCSVYG Trigger: CCCATACACTGAACAGTGCCAAACTCCTAGTTTTTG...AACATTTCCATAGCGTTCACTGGAGTCGTGGGCTTCTTGTTGGGCACCTATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGAGTTCACAGTCAAATTaGAATACTCTGCCAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: KLPSSDFFNCGERGTHGGSSQSN*NTLPTK Trigger: TTTTGTTGGCAGAGTATTGCAATTTGACTGTGAACT...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCAACAGTTAACATCTGCTGAACCACTCATGTTATATAAACAACTGCATCTCCTCCTTGGCCTCTaGATCAGCTCCTGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ITQQLTSAEPLMLYKQLHLLLGL*ISSCLQ Trigger: CTGGAGGCAGGAGCTGATGCAGAGGCCAAGGAGGAG...ATGCAGTTGTTTATATAACATGAGTGGTTCAGCAGATGTTAACTGTTGAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | AACGTTTATGAGTCCTTTATGGGGTCAGCACATTTTAGCTCCTTTGACACTGTGCCCTGTGGTGTAACATaGATGGATGCACACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: NVYESFMGSAHFSSFDTVPCGVT*MDAHRN Trigger: GTTCCTGTGTGCATCCATGCATGTTACACCACAGGG...CACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | CTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTaGATAACCTGGGGACTTTCATATGAGCTGTTGATTCAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LLPAYLPFCIVTPLV*ITWGLSYELLIQQP Trigger: AGGCTGCTGAATCAACAGCTCATATGAAAGTCCCCAGGTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTAAGTCACCAACACTTCTGGAACTCCATTTCCTACAATGGTAACCATGCTCCCAGTGCTCCTCTATaGTCTGTAGAGCAGAACAAT | + |
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Preference number: 2 (lower is better) Translates to: SLSHQHFWNSISYNGNHAPSAPL*SVEQNN Trigger: ATTGTTCTGCTCTACAGAGCATAGAGGAGCACTGGG...AGCATGGTTACCATTGTAGGAAATGGAGTTCCAGAAGTGTTGGTGACTTAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCAACAGTTAACATCTGCTGAACCACTCATGTTATATAAACAACTGCATCTCTGCATCAGCTCCTaGCTCCAGGTTCCTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: ITQQLTSAEPLMLYKQLHLCISS*LQVPAL Trigger: CAAGGCAGGAACCTGGAGGCAGGAGCTGATGCAGAG...ATGCAGTTGTTTATATAACATGAGTGGTTCAGCAGATGTTAACTGTTGAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | AAACACAATCAACGCATCTCTGTGCACATACACAGGAGGTGTACTTaGCTATTGTGGGGTGCTTCAAAGAGGTTTTTAAACCATGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KHNQRISVHIHRRCT*LLWGASKRFLNHVP Trigger: AGGCACATGGTTTAAAAACCTCTTTGAAGCACCCCACAATAGCAAAGTACACCTCCTGTGTATGTGCACAGAGATGCGTTGATTGTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | AACGTTTATGAGTCCTTTATGGGGTCAGCACATTTTAGCTCCTTTGACACTGTGAGCAAGCCAGTCTCCTaGTGTATAAAAGACTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: NVYESFMGSAHFSSFDTVSKPVS*CIKDCE Trigger: CTCACAGTCTTTTATACAGCAGGAGACTGGCTTGCT...CACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACGCACTGTTCAGTGTATaGGGAAGCACTGTAGTCGTT | + |
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Preference number: 2 (lower is better) Translates to: SSPSISSFLYCDSSCVDNALFSV*GSTVVV Trigger: AACGACTACAGTGCTTCCCCATACACTGAACAGTGC...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | TATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACAGTTCACAGTCAAATTaGAATACTCTGCCAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: YACRVHIQKGTLGGASNNSSQSN*NTLPTK Trigger: TTTTGTTGGCAGAGTATTGCAATTTGACTGTGAACT...GTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTGTACATTTCTCACAGTCAAATTCCAATGAAATTCCTTTCTTCACATCCTCTCCAGATTGATGATTaGTCTGAGAGGGCTATGCCC | + |
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Preference number: 2 (lower is better) Translates to: PLYISHSQIPMKFLSSHPLQIDD*SERAMP Trigger: GGGCATAGCCCTCTCAGAGCAATCATCAATCTGGAG...AGGATGTGAAGAAAGGAATTTCATTGGAATTTGACTGTGAGAAATGTACAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTAAGTCACCAACACTTCTGGAACTCCATTTCCTACAATGGTAACCATGCTACAATAGAGCGCTTCTaGCTCTGGGAACTATCTAAT | + |
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Preference number: 2 (lower is better) Translates to: SLSHQHFWNSISYNGNHATIERF*LWELSN Trigger: ATTAGATAGTTCCCAGAGCCAGAAGCGCTCTATTGT...AGCATGGTTACCATTGTAGGAAATGGAGTTCCAGAAGTGTTGGTGACTTAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR CAA 90 bp | GCTTCTTTCCCTGTTTGGGATCTATGGAGCCACCAGGCAGGTTTCTaGGATTTCTTTTCTGGCTTTTTATCATGTCACATATACTATTCA | + |
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Preference number: 2 (lower is better) Translates to: ASFPVWDLWSHQAGF*DFFSGFLSCHIYYS Trigger: TGAATAGTATATGTGACATGATAAAAAGCCAGAAAAGAAATCCAAGAAACCTGCCTGGTGGCTCCATAGATCCCAAACAGGGAAAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
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| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACTCAGAACCTTGTCAGTaGTTCCCAGTGCTCCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHSEPCQ*FPVLLY Trigger: ATAGAGGAGCACTGGGAAGCACTGACAAGGTTCTGA...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACCAAAAACTAGGAGTTTaGCACTGTTCAGTGTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSPSISSFLYCDSSCVDNQKLGV*HCSVYG Trigger: CCCATACACTGAACAGTGCCAAACTCCTAGTTTTTG...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACCAGCAGCATCACCCATaGAATAAAACACAATCAACG | + |
|
Preference number: 2 (lower is better) Translates to: SSPSISSFLYCDSSCVDNQQHHP*NKTQST Trigger: CGTTGATTGTGTTTTATTCCATGGGTGATGCTGCTG...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCACTCAACAGTTAACATCTGCTGAACCACTCATGTTATATAAACAACTGCATAGAAAGGGGGACACATaGAGGGAAAGAGCCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ITQQLTSAEPLMLYKQLHRKGDT*RERACV Trigger: AACACAGGCTCTTTCCCTCCATGTGTCCCCCTTTCT...ATGCAGTTGTTTATATAACATGAGTGGTTCAGCAGATGTTAACTGTTGAGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACACAGGAGGTGTACTTTaGTATTGTGGGGTGCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHTGGVL*YCGVLQ Trigger: TTGAAGCACCCCACAATAGCAAAGTACACCTCCTGT...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACAATCTGGAGTCATTTTaGAAGAGAGGAGAGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHNLESF*KRGEAV Trigger: CACAGCCTCTCCTCTCTTCCAAAATGACTCCAGATT...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACTGTACATTTCTCACAGTCAAATTCCAATGAAATTCCTTTCTTCACATCCTCTGTATAAAAGACTGTaGGCTTCTTTCCCTGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PLYISHSQIPMKFLSSHPLYKRL*ASFPVW Trigger: CCAAACAGGGAAAGAAGCTCACAGTCTTTTATACAG...AGGATGTGAAGAAAGGAATTTCATTGGAATTTGACTGTGAGAAATGTACAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | AACGTTTATGAGTCCTTTATGGGGTCAGCACATTTTAGCTCCTTTGACACTGTGAATTACTTTTGGTTGTaGTGTTTTCTCACAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: NVYESFMGSAHFSSFDTVNYFWL*CFLTAT Trigger: TGTTGCTGTGAGAAAACACCACAACCAAAAGTAATT...CACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACGCAGTTCCTTTACTCTaGCCATTCAGATTAATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHAVPLL*PFRLME Trigger: TTCCATTAATCTGAATGGGCAGAGTAAAGGAACTGC...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR TCA 90 bp | AATACGTCCTCAGACACCCTTAAACAAGTGTGTGTTTCTTTTATACTTTGCATATTTTTCTTCCATCTCTaGATTGGGTCAAGTATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTSSDTLKQVCVSFILCIFFFHL*IGSSIR Trigger: CCTGATACTTGACCCAATTCAGAGATGGAAGAAAAA...TATGCAAAGTATAAAAGAAACACACACTTGTTTAAGGGTGTCTGAGGACGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACCAGCTTTCTTCTCAATaGTTCACAGAGAAAATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHQLSSQ*FTEKIA Trigger: TGCTATTTTCTCTGTGAAGCATTGAGAAGAAAGCTG...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTGTGATAGTGCTTTCTGAAACCATTGTCCCATTTTATAAATCCAGTGATATGACCAGGCAGGTTTCTTaGATTTCTTTTCTGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VVIVLSETIVPFYKSSDMTRQVS*ISFLAF Trigger: AAAAGCCAGAAAAGAAATCCAAGAAACCTGCCTGGT...CATATCACTGGATTTATAAAATGGGACAATGGTTTCAGAAAGCACTATCACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 90 bp | ATTACTGACTATGACATGAAAAATCATTTTTCTTCCATCTCTGAATaGGGTCAAGTATCAGGTTCTCTTGACTCAAGCTTAAGTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: ITDYDMKNHFSSISE*GQVSGSLDSSLSHQ Trigger: TTGGTGACTTAAGCTTGAGTCAAGAGAACCTGATACTTGACCCAATTCAGAGATGGAAGAAAAATGATTTTTCATGTCATAGTCAGTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR GCA 90 bp | AATACGTCCTCAGACACCCTTAAACAAGTGTGTGTTTCTTTTATACTTTGCATAATAGTTTATCATAGCTaGAAAAGATGTCCAGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NTSSDTLKQVCVSFILCIIVYHS*KRCPVH Trigger: GTGAACTGGACATCTTTTGCAGCTATGATAAACTAT...TATGCAAAGTATAAAAGAAACACACACTTGTTTAAGGGTGTCTGAGGACGTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | GAGGAGAGGCTGTGGGGCATCCTCCAGATTGATGATTaGTCTGAGAGGGCTATGCCCACTGTGGGCGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: EERLWGILQIDD*SERAMPTVGGT Trigger: GGTGCCGCCCACAGTGGGCATAGCCCTCTCAGAGCAATCATCAATCTGGAGGATGCCCCACAGCCTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | AGATTGATGATTGCTCTGAGAGGGCTATGCCCACTGTaGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLMIALRGLCPL*AAPPLGWLPCV Trigger: CACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCACAGTGGGCATAGCCCTCTCAGAGCAATCATCAATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCCAGCAAACACGAGTTCGCCATGTGTGCCTGCTTCCCCTCCCTCCAAGTCCCTGTACCTTCAGGGCTaGTCAGCAGCATCACCCATG | + |
|
Preference number: 3 (lower is better) Translates to: DPANTSSPCVPASPPSKSLYLQG*SAASPM Trigger: CATGGGTGATGCTGCTGACAAGCCCTGAAGGTACAG...GGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | CTGAGCATGCCGAGTAGAACACACCGTGAACACAGCTaGCAAAGAGCCACATGCTGCTTCCTGGGCGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSMPSRTHREHS*QRATCCFLGGE Trigger: CTCCCCGCCCAGGAAGCAGCATGTGGCTCTTTGTCAGCTGTGTTCACGGTGTGTTCTACTCGGCATGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | TCTGTAGTCCACCCTGGCCTGGAGTTTCAGATCTTCTaGCTCAGCCTCCTTAGGATGCTCCACCTGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SVVHPGLEFQIF*LSLLRMLHLPH Trigger: GTGGGGCAGGTGGAGCATCCTAAGGAGGCTGAGTCAGAAGATCTGAAACTCCAGGCCAGGGTGGACTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | TCCTACTGTTTAAGGGGCCTCACCTCCTGTGACCTCTaGCCTACAGCACACCCTACAGCAAGCCAGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SYCLRGLTSCDL*PTAHPTASQSP Trigger: AGGAGACTGGCTTGCTGTAGGGTGTGCTGTAGGGCAGAGGTCACAGGAGGTGAGGCCCCTTAAACAGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | CCACAAGTGGGGGCAGGATCAGGGCTAGTGTACTGCTaGTCACAGCCCCCACGAAGGAGATCACAATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PQVGAGSGLVYC*SQPPRRRSQCL Trigger: TAGACATTGTGATCTCCTTCGTGGGGGCTGTGAGCAGCAGTACACTAGCCCTGATCCTGCCCCCACTTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214954.2 |
||
| 3UTR TCA 72 bp | GCCTCTGCATCAGCTCCTGCCTCCAGGTTCCTGCCTTaGGTTCCTGTCCTGACTTCCCTTGATGATGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: ASASAPASRFLP*VPVLTSLDDGL Trigger: CAATCCATCATCAAGGGAAGTCAGGACAGGAACTCAAGGCAGGAACCTGGAGGCAGGAGCTGATGCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | CAGGAAGTAACTGCTGGGGTCACTGCAGTCACCATGTaGTCCAGCAAACACGAGTTCGCCATGTGTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QEVTAGVTAVTM*SSKHEFAMCAC Trigger: GCAGGCACACATGGCGAACTCGTGTTTGCTGGATCACATGGTGACTGCAGTGACCCCAGCAGTTACTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTGCTGTAAGAAAGCAGGCTCAGTTCACAGTCAAATaGCAATACTCTGCCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGGTTPGLVALCAVRKQAQFTVK*QYSANK Trigger: TTTGTTGGCAGAGTATTGCAATTTGACTGTGAACTG...AGCCTGCTTTCTTACAGCACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCCAGCAAACACGAGTTCGCCATGTGTGCCTGCTTCCCCTCCCTCCAAGTCCATGAGCCTGGTTGCTTaGGCTAGTGTGTTTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DPANTSSPCVPASPPSKSMSLVA*ASVFED Trigger: GTCTTCAAACACACTAGCCAAAGCAACCAGGCTCAT...GGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | CACCATGTGATCCAGCAAACACGAGTTCGCCATGTGTaGCTGCTTCCCCTCCCTCCAAGTCCCCAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HHVIQQTRVRHV*LLPLPPSPQTK Trigger: TTTTGTTTGGGGACTTGGAGGGAGGGGAAGCAGGCACACATGGCGAACTCGTGTTTGCTGGATCACATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | GTTCCCACCATGACAGGAAGTAACTGCTGGGGTCACTaGAGTCACCATGTGATCCAGCAAACACGAGTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: VPTMTGSNCWGH*SHHVIQQTRVR Trigger: GCGAACTCGTGTTTGCTGGATCACATGGTGACTGCAGTGACCCCAGCAGTTACTTCCTGTCATGGTGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | CTTCCAGGGACAGTTCCCACCATGACAGGAAGTAACTaGTGGGGTCACTGCAGTCACCATGTGATCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LPGTVPTMTGSN*WGHCSHHVIQQ Trigger: TTGCTGGATCACATGGTGACTGCAGTGACCCCAGCAGTTACTTCCTGTCATGGTGGGAACTGTCCCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | ATGTTCCAGGTCCTCACTGGCCCTTTCACCTACGGCTaGAAGAGGAAGTCAGAACCTTGTCAGTGCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MFQVLTGPFTYG*KRKSEPCQCFP Trigger: TGGGAAGCACTGACAAGGTTCTGACTTCCTCTTTCAGCCGTAGGTGAAAGGGCCAGTGAGGACCTGGAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | GCTTCTGGCTCTGGGAACTATCTAATGCTTGCACGGTaGTCAGCTGGAGTCTACTGTACCTTCAGGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ASGSGNYLMLAR*SAGVYCTFRAC Trigger: ACAAGCCCTGAAGGTACAGTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | GCCTGGTTGCTTTGGCTAGTGTGTTTGAAGACAGGGTaGAGGCCACATCTCTCTGGACAATGCCTAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AWLLWLVCLKTG*RPHLSGQCLSA Trigger: AGCACTTAGGCATTGTCCAGAGAGATGTGGCCTTCACCCTGTCTTCAAACACACTAGCCAAAGCAACCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | ATAGAGCGCTTCTGGCTCTGGGAACTATCTAATGCTTaGACGGTGGTCAGCTGGAGTCTACTGTACCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IERFWLWELSNA*TVVSWSLLYLQ Trigger: CTGAAGGTACAGTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGCGCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | GTCAGAACCTTGTCAGTGCTTCCCAGTGCTCCTCTATaGTCTGTAGAGCAGAACAATAGAGCGCTTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VRTLSVLPSAPL*SVEQNNRALLA Trigger: AGCCAGAAGCGCTCTATTGTTCTGCTCTACAGAGCATAGAGGAGCACTGGGAAGCACTGACAAGGTTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | CTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATaGAGGGAAAGAGCCTGTGTTAAAAAGTCCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRLLQLWRKGDT*RERACVKKSCG Trigger: CCCACAGGACTTTTTAACACAGGCTCTTTCCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | AACCTGAAAACTTCCCAGCTCCGACTTCTTCAACTGTaGAGAAAGGGGGACACATGGAGGGAAAGAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLKTSQLRLLQL*RKGDTWRERAC Trigger: ACAGGCTCTTTCCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTTTCAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | TGTGGGAACAGTGTTTTGAGTGGACTCAGACACCAATaGATTCCTCGGAGCATCAGGGAACAGAGAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: CGNSVLSGLRHQ*IPRSIREQRAI Trigger: AATGGCTCTCTGTTCCCTGATGCTCCGAGGAATGCATTGGTGTCTGAGTCCACTCAAAACACTGTTCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | CTACAGCAAGCCAGTCTCCTGCTGTATAAAAGACTGTaGGCTTCTTTCCCTGTTTGGGATCTATGGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQQASLLLYKRL*ASFPVWDLWSH Trigger: GTGGCTCCATAGATCCCAAACAGGGAAAGAAGCTCACAGTCTTTTATACAGCAGGAGACTGGCTTGCTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | TGGGGTGACAGGAGAGGGTTCACCGCTCTTCTCCCATaGTTACAAACCACTTGTTATGCATGTAGAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WGDRRGFTALLP*LQTTCYACRVH Trigger: GTGAACTCTACATGCATAACAAGTGGTTTGTAATCATGGGAGAAGAGCGGTGAACCCTCTCCTGTCACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| 3UTR CCA 72 bp | GAAATCCGGGCTGATAAGATGCTCACACTCTGTGTGTaGAACTTAAAAAGCCCTGCAGTGACCCACCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: EIRADKMLTLCV*NLKSPAVTHQL Trigger: TAACTGGTGGGTCACTGCAGGGCTTTTTAAGTTCCACACACAGAGTGTGAGCATCTTATCAGCCCGGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTGGTCCTTAGAAAATGTAAGGATTTCCACAAGTGGGGGCAGGATCAGGGCACAAAAACTAGGAGTTaGGCACTGTTCAGTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: VVVLRKCKDFHKWGQDQGTKTRS*ALFSVW Trigger: CCATACACTGAACAGTGCCAAACTCCTAGTTTTTGT...GCCCTGATCCTGCCCCCACTTGTGGAAATCCTTACATTTTCTAAGGACCACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACCTCCAGGTTCCTGCCTaGAGTTCCTGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSPSISSFLYCDSSCVDNLQVPA*SSCPDF Trigger: GAAGTCAGGACAGGAACTCAAGGCAGGAACCTGGAG...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTCCCAGCTCCGACTTCTTCAACTGTGGAGAAAGGGGGACACATGGAGGGCAAAAGTTCTGTATTTaGCCAGGTATTTATCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KLPSSDFFNCGERGTHGGQKFCI*PGIYHA Trigger: GGCATGATAAATACCTGGCAAAATACAGAACTTTTG...CCCTCCATGTGTCCCCCTTTCTCCACAGTTGAAGAAGTCGGAGCTGGGAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | TCAGCACATTTTAGCTCCTTTGACACTGTGCTAAGTTaGGTGATGCATGTCACTGGGCACATGGGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAHFSSFDTVLS*VMHVTGHMGLS Trigger: ACTGAGACCCATGTGCCCAGTGACATGCATCACTCAACTTAGCACAGTGTCAAAGGAGCTAAAATGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACAAGCAGCACTCCTCCTaGGCCTCTGCATCAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHKQHSS*ASASAP Trigger: AGGAGCTGATGCAGAGGCCAAGGAGGAGTGCTGCTT...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | AGTACACCATCTAACAAGACTCAGAGCCAGCTTTGGTaGCAGGTCAGAAAGAACAGAACAGGAAAGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: STPSNKTQSQLW*QVRKNRTGKYW Trigger: CCAGTACTTTCCTGTTCTGTTCTTTCTGACCTGTCACCAAAGCTGGCTCTGAGTCTTGTTAGATGGTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | ATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTaGCGTAGTCGGATAAATAATTTCTTCAACAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQKGTLGGASNN*RSRINNFFNSD Trigger: GTCACTGTTGAAGAAATTATTTATCCGACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| 3UTR CCA 72 bp | TACTGTACCTTCAGGGCTTGTCAGCAGCATCACCCATaGAATAAAACACAATCAACGCATCTCTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YCTFRACQQHHP*NKTQSTHLCAH Trigger: ATGTGCACAGAGATGCGTTGATTGTGTTTTATTCCATGGGTGATGCTGCTGACAAGCCCTGAAGGTACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | GGTTCTCTTGACTCAAGCTTAAGTCACCAACACTTCTaGAACTCCATTTCCTACAATGGTAACCATGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSLDSSLSHQHF*NSISYNGNHAG Trigger: GCCAGCATGGTTACCATTGTAGGAAATGGAGTTCCAGAAGTGTTGGTGACTTAAGCTTGAGTCAAGAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | GACACACCCATCATCTCAACGTTTATGAGTCCTTTATaGGGTCAGCACATTTTAGCTCCTTTGACACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: DTPIISTFMSPL*GQHILAPLTLC Trigger: GCACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTTGAGATGATGGGTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | GACTCCTCTTGTGTTGATAACCTGGGGACTTTCATATaGGCTGTTGATTCAGCAGCCTTCCTCCATAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DSSCVDNLGTFI*AVDSAAFLHKK Trigger: TTTCTTATGGAGGAAGGCTGCTGAATCAACAGCTCATATGAAAGTCCCCAGGTTATCAACACAAGAGGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | CCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACCTaGGGACTTTCATATGAGCTGTTGATTCAGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PFCIVTPLVLIT*GLSYELLIQQP Trigger: AGGCTGCTGAATCAACAGCTCATATGAAAGTCCCCAGGTTATCAACACAAGAGGAGTCACAATACAGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | CCAACGAGATGCAGAAAGTCATGTATGGCAGTAACATaGAGCCATTTAATGACCGGAAGAATCCTGTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: PTRCRKSCMAVT*SHLMTGRILLS Trigger: AGATAACAGGATTCTTCCGGTCATTAAATGGCTGCATGTTACTGCCATACATGACTTTCTGCATCTCGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CCA 72 bp | AACCTAGTTAGCAAGGGTATCGATGTGCACTTAAGCTaGCATTCTCTAGGACCACAAATGCACATATACCAA | + |
|
Preference number: 3 (lower is better) Translates to: NLVSKGIDVHLS*HSLGPQMHIYQ Trigger: TTGGTATATGTGCATTTGTGGTCCTAGAGAATGCCAGCTTAAGTGCACATCGATACCCTTGCTAACTAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | GCACATACACAGGAGGTGTACTTTGCTATTGTGGGGTaGTTCAAAGAGGTTTTTAAACCATGTGCCTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: AHTQEVYFAIVG*FKEVFKPCAYL Trigger: TAAATAGGCACATGGTTTAAAAACCTCTTTGAAGCACCCCACAATAGCAAAGTACACCTCCTGTGTATGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACCAATCTGGAGTCATTTaGGAAGAGAGGAGAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHQSGVI*EERRGC Trigger: ACAGCCTCTCCTCTCTTCCAAAATGACTCCAGATTG...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGTACATTTCTCACAGTCAAATTCCAATGAAATTCCTTTCTTCACATCCTCACCAGGCAGGTTTCTaGGATTTCTTTTCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLYISHSQIPMKFLSSHPHQAGF*DFFSGF Trigger: AAAGCCAGAAAAGAAATCCAAGAAACCTGCCTGGTG...AGGATGTGAAGAAAGGAATTTCATTGGAATTTGACTGTGAGAAATGTACAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTCAAGGCTTTTCCAAAGGGCACATCAAATTCTACAGATTTATGGAACACACAAAAACTAGGAGTTaGGCACTGTTCAGTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSQGFSKGHIKFYRFMEHTKTRS*ALFSVW Trigger: CCATACACTGAACAGTGCCAAACTCCTAGTTTTTGT...GTGTTCCATAAATCTGTAGAATTTGATGTGCCCTTTGGAAAAGCCTTGAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR TCA 72 bp | ACACGTATACAATTCATGGTTTTCAAATCACAGAGCTaGCACACCCATCATCTCAACGTTTATGAGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRIQFMVFKSQS*HTHHLNVYESF Trigger: AAAGGACTCATAAACGTTGAGATGATGGGTGTGTCAGCTCTGTGATTTGAAAACCATGAATTGTATACGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | TGCCCATTCAGATTAATGGAAGACTGCAGTAAGGAATaGTACATGGCTAGGAAATCCAAAAGTTCTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: CPFRLMEDCSKE*YMARKSKSSVF Trigger: AAATACAGAACTTTTGGATTTCCTAGCCATGTAGCATTCCTTACTGCAGTCTTCCATTAATCTGAATGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR GCA 72 bp | GTGCTCCAGTATTTACTAGACAGTTCTCTATTGTTTTaGATCTTCCTAAGCGTTCATTTGGCAGTTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLQYLLDSSLLF*IFLSVHLAVPL Trigger: TAAAGGAACTGCCAAATGAACGCTTAGGAAGATGCAAAACAATAGAGAACTGTCTAGTAAATACTGGAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGATAGTGCTTTCTGAAACCATTGTCCCATTTTATAAATCCAGTGATATGCTAGACAGTTCTCTATaGTTTTGCATCTTCCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVIVLSETIVPFYKSSDMLDSSL*FCIFLS Trigger: GCTTAGGAAGATGCAAAACAATAGAGAACTGTCTAG...CATATCACTGGATTTATAAAATGGGACAATGGTTTCAGAAAGCACTATCACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGATAGTGCTTTCTGAAACCATTGTCCCATTTTATAAATCCAGTGATATGCATAATTACTTTTGGTaGTGGTGTTTTCTCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVIVLSETIVPFYKSSDMHNYFW*WCFLTA Trigger: TGCTGTGAGAAAACACCACAACCAAAAGTAATTATG...CATATCACTGGATTTATAAAATGGGACAATGGTTTCAGAAAGCACTATCACAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTGCTGTAAGAAAGCAGGCTCCAGCCGGCCACTATTaGAAGGTTGTGGGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTTPGLVALCAVRKQAPAGHY*KVVGIW Trigger: CCAGATCCCCACAACCTTCCAATAGTGGCCGGCTGG...AGCCTGCTTTCTTACAGCACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGCTATGCCCACTGTGGGCGGCACCACCCCTGGGCTGGTTGCCCTGTGTGTAGCACCACTCCTATaGCTTCAAAAGCAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ERAMPTVGGTTPGLVALCVAPLL*LQKQTQ Trigger: CTGTGTTTGCTTTTGAAGGCATAGGAGTGGTGCTAC...ACACAGGGCAACCAGCCCAGGGGTGGTGCCGCCCACAGTGGGCATAGCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGCTCTGGGAACTATCTAATGCTTGCACGGTGGTCAGCTGGAGTCTACCTTCTCTCACAGGCATaGGACAGGTCCGAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSGNYLMLARWSAGVYLLSQA*DRSEPF Trigger: AAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAG...GTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GGATTTCCACAAGTGGGGGCAGGATCAGGGCTAGTGTACTGCTGCTCACAGCCCACTATTGGAAGGTTGTaGGGATCTGGCATGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFPQVGAGSGLVYCCSQPTIGRL*GSGMFL Trigger: TAGGAACATGCCAGATCCCCACAACCTTCCAATAGT...GGGCTGTGAGCAGCAGTACACTAGCCCTGATCCTGCCCCCACTTGTGGAAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACTCCTCCTTGGCCTCTGCATCAGCTCCTGCCTCCAGGTTCCTGCCTTTACAACCACATGTCCTaGGGAAGATTCAGTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSTPPWPLHQLLPPGSCLYNHMS*GRFSVM Trigger: CATTACACTGAATCTTCCCCAGGACATGTGGTTGTA...AAGGCAGGAACCTGGAGGCAGGAGCTGATGCAGAGGCCAAGGAGGAGTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GGATTTCCACAAGTGGGGGCAGGATCAGGGCTAGTGTACTGCTGCTCACAGCCCTACAACCACATGTCCTaGGGAAGATTCAGTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: GFPQVGAGSGLVYCCSQPYNHMS*GRFSVM Trigger: CATTACACTGAATCTTCCCCAGGACATGTGGTTGTA...GGGCTGTGAGCAGCAGTACACTAGCCCTGATCCTGCCCCCACTTGTGGAAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGCTCTGGGAACTATCTAATGCTTGCACGGTGGTCAGCTGGAGTCTACAGAGCATATAGACCCTaGGGTCCACACTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSGNYLMLARWSAGVYRAYRP*GPHFFS Trigger: AGAGAAGAAGTGTGGACCTCAGGGTCTATATGCTCT...GTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | ATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTGCCGTAGTCGGATAAATAGATGCACCAAGGTCTaGAGGAACGAAATCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQKGTLGGASNNCRSRINRCTKV*RNEIPC Trigger: GCACGGGATTTCGTTCCTGCAGACCTTGGTGCATCT...ATTTATCCGACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCTTCTTTCCCTGTTTGGGATCTATGGAGCCACCAGGCAGGTTTCTTGGGGTAGTGCTTCTGTATaGGCACAAGCGTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CELLSLFGIYGATRQVSWGSASV*AQASVP Trigger: AGGAACAGACGCTTGTGCCCATACAGAAGCACTACC...CCAAGAAACCTGCCTGGTGGCTCCATAGATCCCAAACAGGGAAAGAAGCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | CCCTTTCACCTACGGCTGAAAGAGGAAGTCAGAACCTaGTCAGTGCTTCCCAGTGCTCCTCTATGCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFHLRLKEEVRT*SVLPSAPLCSV Trigger: TACAGAGCATAGAGGAGCACTGGGAAGCACTGACAAGGTTCTGACTTCCTCTTTCAGCCGTAGGTGAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGTCCCCAAACAAAAGGAAGAGCTGCTAGAGTCAACATATCTTCTCCAATCAGGGCTAGTGTACTaGTGCTCACAGCCCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LQVPKQKEELLESTYLLQSGLVY*CSQPPR Trigger: TCGTGGGGGCTGTGAGCAGCAGTACACTAGCCCTGA...TTGGAGAAGATATGTTGACTCTAGCAGCTCTTCCTTTTGTTTGGGGACTTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGCTCTGGGAACTATCTAATGCTTGCACGGTGGTCAGCTGGAGTCTACGGTGCCAGCAACAACTaGCGTAGTCGGATAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGSGNYLMLARWSAGVYGASNN*RSRINN Trigger: ATTATTTATCCGACTACGGCAGTTGTTGCTGGCACC...GTAGACTCCAGCTGACCACCGTGCAAGCATTAGATAGTTCCCAGAGCCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCACCGCTCTTCTCCCATGATTACAAACCACTTGTTATGCATGTAGAGTTCCCAGCCGGCCACTATTaGAAGGTTGTGGGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPLFSHDYKPLVMHVEFPAGHY*KVVGIW Trigger: CCAGATCCCCACAACCTTCCAATAGTGGCCGGCTGG...GAACTCTACATGCATAACAAGTGGTTTGTAATCATGGGAGAAGAGCGGTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGAAGCCCACGACTCCAGTGAACGCTATGGAAATGTTTTTCAGGATCATCCCAGCCGGCCACTATTaGAAGGTTGTGGGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKKPTTPVNAMEMFFRIIPAGHY*KVVGIW Trigger: CCAGATCCCCACAACCTTCCAATAGTGGCCGGCTGG...GATGATCCTGAAAAACATTTCCATAGCGTTCACTGGAGTCGTGGGCTTCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| 3UTR CAA 72 bp | AGTTCTCCTCTTCAGCATCAGATGAGCCTGGTTGCTTaGGCTAGTGTGTTTGAAGACAGGGTGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLQHQMSLVA*ASVFEDRVKAT Trigger: TGTGGCCTTCACCCTGTCTTCAAACACACTAGCCAAAGCAACCAGGCTCATCTGATGCTGAAGAGGAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTGCCGTAGTGTAGCACCACTCCTATaGCTTCAAAAGCAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVHIQKGTLGGASNNCRSVAPLL*LQKQTQ Trigger: CTGTGTTTGCTTTTGAAGGCATAGGAGTGGTGCTAC...ACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| 3UTR CAA 72 bp | AGAGCCTGTGTTAAAAAGTCCTGTGGGAACAGTGTTTaGAGTGGACTCAGACACCAATGCATTCCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RACVKKSCGNSV*SGLRHQCIPRS Trigger: GCTCCGAGGAATGCATTGGTGTCTGAGTCCACTCAAAACACTGTTCCCACAGGACTTTTTAACACAGGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTGCCGTAGTCGGATAAATCCCAGGAATCCTTCATaGACCTGTTTCACATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQKGTLGGASNNCRSRINPRNPS*TCFTFS Trigger: TGAGAATGTGAAACAGGTTCATGAAGGATTCCTGGG...ATTTATCCGACTACGGCAGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR TCA 90 bp | AAACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCTTCTCTCACAGGCATaGGACAGGTCCGAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KPLVMHVEFTFRKGLWEVLLSQA*DRSEPF Trigger: AAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAG...CACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGTCCCCAAACAAAAGGAAGAGCTGCTAGAGTCAACATATCTTCTCCAAAGATGCACCAAGGTCTaGAGGAACGAAATCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVPKQKEELLESTYLLQRCTKV*RNEIPC Trigger: GCACGGGATTTCGTTCCTGCAGACCTTGGTGCATCT...TTGGAGAAGATATGTTGACTCTAGCAGCTCTTCCTTTTGTTTGGGGACTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCCCAACAAGAAGCCCACGACTCCAGTGAACGCTATGGAAATGTTTTTCAGCCTGAGGGAAGCGTTTaGACTCTCTCATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQQEAHDSSERYGNVFQPEGSV*TLSFGF Trigger: AAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGG...CTGAAAAACATTTCCATAGCGTTCACTGGAGTCGTGGGCTTCTTGTTGGGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR GCA 90 bp | ACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGACAATGTAGACGCTaGAGAATCCCAGCTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTCYACRVHIQKGTLGGARQCRR*RIPAVL Trigger: TAACACAGCTGGGATTCTGCAGCGTCTACATTGTCT...GGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTGTAGTGGTCCTTAGAAAATGTAAGGATTTCCACAAGTGGGGGCAGGATAAACACAAGGCTGATTaGTCCAAGCACGATGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YVVVVLRKCKDFHKWGQDKHKAD*SKHDAR Trigger: GCGGGCATCGTGCTTGGACCAATCAGCCTTGTGTTT...ATCCTGCCCCCACTTGTGGAAATCCTTACATTTTCTAAGGACCACTACAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | TATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTTGGACTCTCTCATTTaGTTTTCCAGTGGTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YACRVHIQKGTLGGASNNLDSLI*FSSGST Trigger: GGTGCTACCACTGGAAAACCAAATGAGAGAGTCCAA...GTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CCA 90 bp | CGCCCCAGCACAGGTGATACTAACCAAGAGGGACCGTATCCCAAATTCACAAATAAATTATCACAAGACTaGCAGCCATGGAAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSTGDTNQEGPYPKFTNKLSQD*QPWKCW Trigger: CCAACATTTCCATGGCTGCCAGTCTTGTGATAATTT...ATTTGTGAATTTGGGATACGGTCCCTCTTGGTTAGTATCACCTGTGCTGGGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214954.2 |
||
| CDS-3UTR GCA 90 bp | ACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGGGATAATGATCTCTaGTGGGACATAGAACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTCYACRVHIQKGTLGGARDNDL*WDIELN Trigger: ATTCAGTTCTATGTCCCAGCAGAGATCATTATCCCT...GGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | CACGACTCCAGTGAACGCTATGGAAATGTTTTTCAGGATCATCCATATGTTGTAGGTAGTGCTTCTGTATaGGCACAAGCGTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HDSSERYGNVFQDHPYVVGSASV*AQASVP Trigger: AGGAACAGACGCTTGTGCCCATACAGAAGCACTACC...TACAACATATGGATGATCCTGAAAAACATTTCCATAGCGTTCACTGGAGTCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | ATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGGAGGTGCCAGCAACAACTAAATTATCACAAGACTaGCAGCCATGGAAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MHVEFTFRKGLWEVPATTKLSQD*QPWKCW Trigger: CCAACATTTCCATGGCTGCCAGTCTTGTGATAATTT...AGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAATGTGAACTCTACATGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CCA 90 bp | CCATATGTTGTAGTGGTCCTTAGAAAATGTAAGGATTTCCACAAGTGGGGGCAGCCTGAGGGAAGCGTTTaGACTCTCTCATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PYVVVVLRKCKDFHKWGQPEGSV*TLSFGF Trigger: AAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGG...CTGCCCCCACTTGTGGAAATCCTTACATTTTCTAAGGACCACTACAACATATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| 3UTR CAA 72 bp | CAACGCATCTCTGTGCACATACACAGGAGGTGTACTTaGCTATTGTGGGGTGCTTCAAAGAGGTTTTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRISVHIHRRCT*LLWGASKRFLN Trigger: GTTTAAAAACCTCTTTGAAGCACCCCACAATAGCAAAGTACACCTCCTGTGTATGTGCACAGAGATGCGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTAAGTCACCAACACTTCTGGAACTCCATTTCCTACAATGGTAACCATGCTCCCAGGAATCCTTCATaGACCTGTTTCACATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSHQHFWNSISYNGNHAPRNPS*TCFTFS Trigger: TGAGAATGTGAAACAGGTTCATGAAGGATTCCTGGG...AGCATGGTTACCATTGTAGGAAATGGAGTTCCAGAAGTGTTGGTGACTTAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | TCACCGCTCTTCTCCCATGATTACAAACCACTTGTTATGCATGTAGAGTTCACAGTAGCACCACTCCTATaGCTTCAAAAGCAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLFSHDYKPLVMHVEFTVAPLL*LQKQTQ Trigger: CTGTGTTTGCTTTTGAAGGCATAGGAGTGGTGCTAC...TGTGAACTCTACATGCATAACAAGTGGTTTGTAATCATGGGAGAAGAGCGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTAAGTCACCAACACTTCTGGAACTCCATTTCCTACAATGGTAACCATGCTACTATTGGAAGGTTGTaGGGATCTGGCATGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSHQHFWNSISYNGNHATIGRL*GSGMFL Trigger: TAGGAACATGCCAGATCCCCACAACCTTCCAATAGT...AGCATGGTTACCATTGTAGGAAATGGAGTTCCAGAAGTGTTGGTGACTTAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | AACGTTTATGAGTCCTTTATGGGGTCAGCACATTTTAGCTCCTTTGACACTGTGCCTGAGGGAAGCGTTTaGACTCTCTCATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVYESFMGSAHFSSFDTVPEGSV*TLSFGF Trigger: AAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGG...CACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | TCAAATTGCAATACTCTGCCAACAAAAACTAGGAGTTaGGCACTGTTCAGTGTATGGGGAAGCACTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNCNTLPTKTRS*ALFSVWGSTVV Trigger: GACTACAGTGCTTCCCCATACACTGAACAGTGCCAAACTCCTAGTTTTTGTTGGCAGAGTATTGCAATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| 3UTR CAA 72 bp | ATCTCTGTGCACATACACAGGAGGTGTACTTTGCTATaGTGGGGTGCTTCAAAGAGGTTTTTAAACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHIHRRCTLL*WGASKRFLNHV Trigger: CACATGGTTTAAAAACCTCTTTGAAGCACCCCACAATAGCAAAGTACACCTCCTGTGTATGTGCACAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GTTGTGATAGTGCTTTCTGAAACCATTGTCCCATTTTATAAATCCAGTGATATGAAACACAAGGCTGATTaGTCCAAGCACGATGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVIVLSETIVPFYKSSDMKHKAD*SKHDAR Trigger: GCGGGCATCGTGCTTGGACCAATCAGCCTTGTGTTT...CATATCACTGGATTTATAAAATGGGACAATGGTTTCAGAAAGCACTATCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | GATTACAAACCACTTGTTATGCATGTAGAGTTCACATTCAGAAAGGGACTCTGGTTGGACTCTCTCATTTaGTTTTCCAGTGGTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DYKPLVMHVEFTFRKGLWLDSLI*FSSGST Trigger: GGTGCTACCACTGGAAAACCAAATGAGAGAGTCCAA...CCAGAGTCCCTTTCTGAATGTGAACTCTACATGCATAACAAGTGGTTTGTAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| 3UTR CAA 72 bp | GTAAACAGAAGCCCTCTCCTCCATAATTACTTTTGGTaGTGGTGTTTTCTCACAGCAACAGAAACCCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VNRSPLLHNYFW*WCFLTATETLT Trigger: TGTTAGGGTTTCTGTTGCTGTGAGAAAACACCACAACCAAAAGTAATTATGGAGGAGAGGGCTTCTGTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGTCCCCAAACAAAAGGAAGAGCTGCTAGAGTCAACATATCTTCTCCAAGACATAGAACTGAATTaGATAGGTCACAAAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVPKQKEELLESTYLLQDIELN*IGHKNA Trigger: GGCATTTTTGTGACCTATTCAATTCAGTTCTATGTC...TTGGAGAAGATATGTTGACTCTAGCAGCTCTTCCTTTTGTTTGGGGACTTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | AACGTTTATGAGTCCTTTATGGGGTCAGCACATTTTAGCTCCTTTGACACTGTGCAACGTACCAATATGTaGATACAGTGGACGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NVYESFMGSAHFSSFDTVQRTNM*IQWTEI Trigger: TATTTCCGTCCACTGTATGCACATATTGGTACGTTG...CACAGTGTCAAAGGAGCTAAAATGTGCTGACCCCATAAAGGACTCATAAACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | TCACCGCTCTTCTCCCATGATTACAAACCACTTGTTATGCATGTAGAGTTCACACAACGTACCAATATGTaGATACAGTGGACGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SPLFSHDYKPLVMHVEFTQRTNM*IQWTEI Trigger: TATTTCCGTCCACTGTATGCACATATTGGTACGTTG...TGTGAACTCTACATGCATAACAAGTGGTTTGTAATCATGGGAGAAGAGCGGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTGATAGTGCTTTCTGAAACCATTGTCCCATTTTATAAATCCAGTGATATGTTCAGAAAGGGACTCTaGGAGGTGCCAGCAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: VVIVLSETIVPFYKSSDMFRKGL*EVPATT Trigger: AGTTGTTGCTGGCACCTCCCAGAGTCCCTTTCTGAA...CATATCACTGGATTTATAAAATGGGACAATGGTTTCAGAAAGCACTATCACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | CCACTGTACATTTCTCACAGTCAAATTCCAATGAAATTCCTTTCTTCACATCCTAGACAATGTAGACGCTaGAGAATCCCAGCTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLYISHSQIPMKFLSSHPRQCRR*RIPAVL Trigger: TAACACAGCTGGGATTCTGCAGCGTCTACATTGTCT...AGGATGTGAAGAAAGGAATTTCATTGGAATTTGACTGTGAGAAATGTACAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACAGGGATAATGATCTCTaGTGGGACATAGAACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSISSFLYCDSSCVDNRDNDL*WDIELN Trigger: ATTCAGTTCTATGTCCCAGCAGAGATCATTATCCCT...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCCCAGCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTTGATAACAAATTATCACAAGACTaGCAGCCATGGAAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSISSFLYCDSSCVDNKLSQD*QPWKCW Trigger: CCAACATTTCCATGGCTGCCAGTCTTGTGATAATTT...GTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGCTGGGAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | GCATATCTTCCTTTCTGTATTGTGACTCCTCTTGTGTaGATAACCTGGGGACTTTCATATGAGCTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AYLPFCIVTPLV*ITWGLSYELLI Trigger: AATCAACAGCTCATATGAAAGTCCCCAGGTTATCAACACAAGAGGAGTCACAATACAGAAAGGAAGATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | AATACGTCCTCAGACACCCTTAAACAAGTGTGTGTTTCTTTTATACTTTGCATATTGGACTCTCTCATTTaGTTTTCCAGTGGTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NTSSDTLKQVCVSFILCILDSLI*FSSGST Trigger: GGTGCTACCACTGGAAAACCAAATGAGAGAGTCCAA...TATGCAAAGTATAAAAGAAACACACACTTGTTTAAGGGTGTCTGAGGACGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | AGTTCTCTATTGTTTTGCATCTTCCTAAGCGTTCATTaGGCAGTTCCTTTACTCTGCCCATTCAGATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLFCIFLSVH*AVPLLCPFRLM Trigger: CATTAATCTGAATGGGCAGAGTAAAGGAACTGCCAAATGAACGCTTAGGAAGATGCAAAACAATAGAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | AGTGCTCCAGTATTTACTAGACAGTTCTCTATTGTTTaGCATCTTCCTAAGCGTTCATTTGGCAGTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPVFTRQFSIV*HLPKRSFGSSF Trigger: AAAGGAACTGCCAAATGAACGCTTAGGAAGATGCAAAACAATAGAGAACTGTCTAGTAAATACTGGAGCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGATCATCCATATGTTGTAGTGGTCCTTAGAAAATGTAAGGATTTCCACGACATAGAACTGAATTaGATAGGTCACAAAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQDHPYVVVVLRKCKDFHDIELN*IGHKNA Trigger: GGCATTTTTGTGACCTATTCAATTCAGTTCTATGTC...GTGGAAATCCTTACATTTTCTAAGGACCACTACAACATATGGATGATCCTGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115588.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTCAACAGTTAACATCTGCTGAACCACTCATGTTATATAAACAACTGCATGACATAGAAAGTGACTaGAACGTACCAATATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITQQLTSAEPLMLYKQLHDIESD*NVPICA Trigger: TGCACATATTGGTACGTTGCAGTCACTTTCTATGTC...ATGCAGTTGTTTATATAACATGAGTGGTTCAGCAGATGTTAACTGTTGAGTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| 3UTR CAA 72 bp | TATGACATGAAAAATCATTTTTCTTCCATCTCTGAATaGGGTCAAGTATCAGGTTCTCTTGACTCAAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YDMKNHFSSISE*GQVSGSLDSSL Trigger: TAAGCTTGAGTCAAGAGAACCTGATACTTGACCCAATTCAGAGATGGAAGAAAAATGATTTTTCATGTCATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CCA 90 bp | ATCACTCAACAGTTAACATCTGCTGAACCACTCATGTTATATAAACAACTGCATCAAGAGAATTATAAGTaGGAGAAAGCAGAGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: ITQQLTSAEPLMLYKQLHQENYK*EKAEHI Trigger: TATATGCTCTGCTTTCTCCCACTTATAATTCTCTTG...ATGCAGTTGTTTATATAACATGAGTGGTTCAGCAGATGTTAACTGTTGAGTGAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS GCA 90 bp | CAGCTGTGTTATCACCAGAAAGAAGTCGACCACGCTCCGCCCCCATaGTGCCTGTCGCTGAAGGCAACTCCACGGACTAGCCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLCYHQKEVDHAPPP*CLSLKATPRTSLHG Trigger: GCCATGGAGGCTAGTCCGTGGAGTTGCCTTCAGCGACAGGCAGCATGGGGGCGGAGCGTGGTCGACTTCTTTCTGGTGATAACACAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 90 bp | GGAACGAAATCCCGTGCTGCCCATCGAGCTGGTAGTGCTTCTGTATaGGCACAAGCGTCTGTTCCTGCTCCTCGTCGGACGACCCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: GTKSRAAHRAGSASV*AQASVPAPRRTTHR Trigger: TCGATGGGTCGTCCGACGAGGAGCAGGAACAGACGCTTGTGCCCATACAGAAGCACTACCAGCTCGATGGGCAGCACGGGATTTCGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 90 bp | CTGTGTTATCACCAGAAAGAAGTCGACCACGCTCCGCCCCCATGCTaGCTGTCGCTGAAGGCAACTCCACGGACTAGCCTCCATGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCYHQKEVDHAPPPC*LSLKATPRTSLHGK Trigger: TTTGCCATGGAGGCTAGTCCGTGGAGTTGCCTTCAGCGACAGGCAGCATGGGGGCGGAGCGTGGTCGACTTCTTTCTGGTGATAACACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 90 bp | ACAAGCGTCTGTTCCTGCTCCTCGTCGGACGACCCATCGAAATTCTaGTCGTTTATTAAGGGCCTCATCACGTCCATATCGAGCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TSVCSCSSSDDPSKF*SFIKGLITSISSSS Trigger: CGAGGAGCTCGATATGGACGTGATGAGGCCCTTAATAAACGAGCAGAATTTCGATGGGTCGTCCGACGAGGAGCAGGAACAGACGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS TCA 90 bp | CTGATGTACAGCACGGTGACGATGGCCATGCCGATGTTCAATGCCTaGGGGAAGCGTTTGGACTCTCTCATTTGGTTTTCCAGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMYSTVTMAMPMFNA*GKRLDSLIWFSSGS Trigger: GCTACCACTGGAAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGGCATTGAACATCGGCATGGCCATCGTCACCGTGCTGTACATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS TCA 90 bp | GTCCACACTTCTTCTCTCACAGGCATGAGACAGGTCCGAGCCATTTaGAACAATCGGCGTGCTCCCCAGGAATCCTTCATGAACCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHTSSLTGMRQVRAI*NNRRAPQESFMNLF Trigger: AAACAGGTTCATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAGAAGTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 90 bp | TCTCACAGGCATGAGACAGGTCCGAGCCATTTGAAACAATCGGCGTaGTCCCCAGGAATCCTTCATGAACCTGTTTCACATTCTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SHRHETGPSHLKQSA*SPGILHEPVSHSQL Trigger: TAGCTGAGAATGTGAAACAGGTTCATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATGCCTGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 90 bp | GTGCATACAGTGGACGGAAATAATTCCTATAAACACAAGGCTGATTaGTCCAAGCACGATGCCCGCGTTCTTTATAGCCAAGGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VHTVDGNNSYKHKAD*SKHDARVLYSQGEP Trigger: GGGCTCCCCTTGGCTATAAAGAACGCGGGCATCGTGCTTGGACCAATCAGCCTTGTGTTTATAGGAATTATTTCCGTCCACTGTATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGTCCCCAAACAAAAGGAAGAGCTGCTAGAGTCAACATATCTTCTCCAATCCAGCCGGCCACTATaGGAAGGTTGTGGGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQVPKQKEELLESTYLLQSSRPL*EGCGDL Trigger: CAGATCCCCACAACCTTCCAATAGTGGCCGGCTGGA...TTGGAGAAGATATGTTGACTCTAGCAGCTCTTCCTTTTGTTTGGGGACTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061568.9 |
||
| CDS-3UTR CAA 90 bp | AACAAGAAGCCCACGACTCCAGTGAACGCTATGGAAATGTTTTTCAGGATCATCTCCAGCCGGCCACTATaGGAAGGTTGTGGGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NKKPTTPVNAMEMFFRIISSRPL*EGCGDL Trigger: CAGATCCCCACAACCTTCCAATAGTGGCCGGCTGGA...GATGATCCTGAAAAACATTTCCATAGCGTTCACTGGAGTCGTGGGCTTCTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS-3UTR CAA 90 bp | CCATATGTTGTAGTGGTCCTTAGAAAATGTAAGGATTTCCACAAGTGGGGGCAGTCCAGCCGGCCACTATaGGAAGGTTGTGGGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYVVVVLRKCKDFHKWGQSSRPL*EGCGDL Trigger: CAGATCCCCACAACCTTCCAATAGTGGCCGGCTGGA...CTGCCCCCACTTGTGGAAATCCTTACATTTTCTAAGGACCACTACAACATATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS TCA 90 bp | AAGAGGGACCGTATCCCAAATTCACAAATGCGCTTCCATTTGGCATaGAGTCTAGCAGTGACTCCAGGGATAATGATCTCTGCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KRDRIPNSQMRFHLA*SLAVTPGIMISAGT Trigger: TGTCCCAGCAGAGATCATTATCCCTGGAGTCACTGCTAGACTTCATGCCAAATGGAAGCGCATTTGTGAATTTGGGATACGGTCCCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 90 bp | AAAGAGATTCTTCAGCTCGCGAATGAAGACCAAGAGAATTATAAGTaGGAGAAAGCAGAGCATATAGACCCTGAGGTCCACACTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEILQLANEDQENYK*EKAEHIDPEVHTSS Trigger: AGAAGAAGTGTGGACCTCAGGGTCTATATGCTCTGCTTTCTCCCACTTATAATTCTCTTGGTCTTCATTCGCGAGCTGAAGAATCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 72 bp | TCCCGTGCTGCCCATCGAGCTGGTAGTGCTTCTGTATaGGCACAAGCGTCTGTTCCTGCTCCTCGTCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SRAAHRAGSASV*AQASVPAPRRT Trigger: CGTCCGACGAGGAGCAGGAACAGACGCTTGTGCCCATACAGAAGCACTACCAGCTCGATGGGCAGCACGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 72 bp | TATCACCAGAAAGAAGTCGACCACGCTCCGCCCCCATaGTGCCTGTCGCTGAAGGCAACTCCACGGACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: YHQKEVDHAPPP*CLSLKATPRTS Trigger: GCTAGTCCGTGGAGTTGCCTTCAGCGACAGGCAGCATGGGGGCGGAGCGTGGTCGACTTCTTTCTGGTGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 72 bp | GTCCCGATGTTCCCCTTGAGAAGATGCACCAAGGTCTaGAGGAACGAAATCCCGTGCTGCCCATCGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VPMFPLRRCTKV*RNEIPCCPSSW Trigger: CCAGCTCGATGGGCAGCACGGGATTTCGTTCCTGCAGACCTTGGTGCATCTTCTCAAGGGGAACATCGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 72 bp | CCTAAAAGGCCAGTCCCGATGTTCCCCTTGAGAAGATaGACCAAGGTCTGCAGGAACGAAATCCCGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PKRPVPMFPLRR*TKVCRNEIPCC Trigger: GCAGCACGGGATTTCGTTCCTGCAGACCTTGGTGCATCTTCTCAAGGGGAACATCGGGACTGGCCTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS TCA 72 bp | TCTTCTCTCACAGGCATGAGACAGGTCCGAGCCATTTaGAACAATCGGCGTGCTCCCCAGGAATCCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSLTGMRQVRAI*NNRRAPQESFM Trigger: CATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS TCA 72 bp | AGCACGGTGACGATGGCCATGCCGATGTTCAATGCCTaGGGGAAGCGTTTGGACTCTCTCATTTGGTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STVTMAMPMFNA*GKRLDSLIWFS Trigger: GGAAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGGCATTGAACATCGGCATGGCCATCGTCACCGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS CAA 90 bp | GGTCCACACTTCTTCTCTCACAGGCATGAGACAGGTCCGAGCCATTaGAAACAATCGGCGTGCTCCCCAGGAATCCTTCATGAACCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPHFFSHRHETGPSH*KQSACSPGILHEPV Trigger: AACAGGTTCATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAGAAGTGTGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 72 bp | TGTTCCTGCTCCTCGTCGGACGACCCATCGAAATTCTaGTCGTTTATTAAGGGCCTCATCACGTCCATATCG | + |
|
Preference number: 6 (lower is better) Translates to: CSCSSSDDPSKF*SFIKGLITSIS Trigger: CGATATGGACGTGATGAGGCCCTTAATAAACGAGCAGAATTTCGATGGGTCGTCCGACGAGGAGCAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 72 bp | TGGCCATGCCGATGTTCAATGCCTGAGGGAAGCGTTTaGACTCTCTCATTTGGTTTTCCAGTGGTAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: WPCRCSMPEGSV*TLSFGFPVVAP Trigger: TGGTGCTACCACTGGAAAACCAAATGAGAGAGTCCAAACGCTTCCCTCAGGCATTGAACATCGGCATGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 ENSMUST00000214954.2 |
||
| CDS CAA 72 bp | TTCTTCTCTCACAGGCATGAGACAGGTCCGAGCCATTaGAAACAATCGGCGTGCTCCCCAGGAATCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FFSHRHETGPSH*KQSACSPGILH Trigger: ATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATGCCTGTGAGAGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS GCA 72 bp | CATGAGACAGGTCCGAGCCATTTGAAACAATCGGCGTaGTCCCCAGGAATCCTTCATGAACCTGTTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: HETGPSHLKQSA*SPGILHEPVSH Trigger: ATGTGAAACAGGTTCATGAAGGATTCCTGGGGAGCACGCCGATTGTTTCAAATGGCTCGGACCTGTCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 72 bp | GTGGACGGAAATAATTCCTATAAACACAAGGCTGATTaGTCCAAGCACGATGCCCGCGTTCTTTATAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VDGNNSYKHKAD*SKHDARVLYSQ Trigger: TTGGCTATAAAGAACGCGGGCATCGTGCTTGGACCAATCAGCCTTGTGTTTATAGGAATTATTTCCGTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS TCA 72 bp | CGTATCCCAAATTCACAAATGCGCTTCCATTTGGCATaGAGTCTAGCAGTGACTCCAGGGATAATGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RIPNSQMRFHLA*SLAVTPGIMIS Trigger: AGAGATCATTATCCCTGGAGTCACTGCTAGACTTCATGCCAAATGGAAGCGCATTTGTGAATTTGGGATACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 |
||
| CDS CCA 72 bp | CAACATACTGGTAAATTATCACAAGACTGGCAGCCATaGAAATGTTGGCAAGGAATGAAAGTACAAAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QHTGKLSQDWQP*KCWQGMKVQRD Trigger: ATCTCTTTGTACTTTCATTCCTTGCCAACATTTCCATGGCTGCCAGTCTTGTGATAATTTACCAGTATGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061568.9 ENSMUST00000115588.8 ENSMUST00000214954.2 |
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