Pregenerated sensors for SLC36A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049491Ensembl transcript IDs: ENSMUST00000020502.9, ENSMUST00000069816.6, ENSMUST00000128244.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCGAGTGTCCAGGATGGAGGTCATCACCAGGCTCTGCCTCGGCTaGCAGACGTTGGAGGTGAAGTGGGCTTCTTCCATGATCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: KRVSRMEVITRLCLG*QTLEVKWASSMICC Trigger: ACAACAGATCATGGAAGAAGCCCACTTCACCTCCAACGTCTGCCAGCCGAGGCAGAGCCTGGTGATGACCTCCATCCTGGACACTCGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR CCA 90 bp | GTCATCACCAGGCTCTGCCTCGGCTGGCAGACGTTGGAGGTGAAGTaGGCTTCTTCCATGATCTGTTGTAAGTTGTCCGCCAGAAACATG | + |
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Preference number: 1 (lower is better) Translates to: VITRLCLGWQTLEVK*ASSMICCKLSARNM Trigger: CATGTTTCTGGCGGACAACTTACAACAGATCATGGAAGAAGCCCACTTCACCTCCAACGTCTGCCAGCCGAGGCAGAGCCTGGTGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR TCA 90 bp | TTGTGGTCTCTTCATAGTTCACAAAACTCCTCTGCAGTCTCTGAGTaGGATGGCAGGCACAGTTCAGCAGGATATCCATACAGTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: LWSLHSSQNSSAVSE*DGRHSSAGYPYSAL Trigger: CAGTGCACTGTATGGATATCCTGCTGAACTGTGCCTGCCATCTCACTCAGAGACTGCAGAGGAGTTTTGTGAACTATGAAGAGACCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR CAA 90 bp | TGCTCAGAGAGTGCTAGGTGCCAGGGTTCCGAGTCTTCGTCACACTaGTGTGGGCAGCTGCTGGCCAGGCTGGGAAGAATGGGGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CSESARCQGSESSSH*CGQLLARLGRMGES Trigger: TGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCTGGCACCTAGCACTCTCTGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCCAACCAGGGGCAGGTTaGTGTGGTGTGGGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: AGSSRTGLGMSQVHTLRGQPGAG*CGVGSG Trigger: TCCAGACCCCACACCACAGCAACCTGCCCCTGGTTG...GCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGATGACCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCCTGCAGAAGCCCAGCTaGGTGACGATCAGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AGSSRTGLGMSQVHTLRGLQKPS*VTISRK Trigger: CTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAG...GCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGATGACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCGGCAGACCAAGGCTGTaGGGACAGTCAGGTCTACGA | + |
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Preference number: 2 (lower is better) Translates to: AGSSRTGLGMSQVHTLRGGRPRL*GQSGLR Trigger: TCGTAGACCTGACTGTCCGCACAGCCTTGGTCTGCC...GCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGATGACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCAGGATATCCATACAGTaGACTGTGAGCGCCCCGATG | + |
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Preference number: 2 (lower is better) Translates to: AGSSRTGLGMSQVHTLRGRISIQ*TVSAPM Trigger: CATCGGGGCGCTCACAGTGCACTGTATGGATATCCT...GCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGATGACCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCCCAGGATGCCTCAGCCAAGGACTTaGACACGTTTCCAGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ISYRAWYVPSTHPKRPRMPQPRT*TRFQAV Trigger: TACAGCCTGGAAACGTGTCCAAGTCCTTGGCTGAGG...CATCCTGGGCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCGTACATCAGCTTGACTaGCTGGTACAGCCAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: AGSSRTGLGMSQVHTLRGVHQLD*LVQPAN Trigger: ATTTGCTGGCTGTACCAGTCAGTCAAGCTGATGTAC...GCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGATGACCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR GCA 90 bp | CACGCTGCAGAAGCCCAGCTGAGTGACGATCAGCAGGAAGCTCACAACGTACCTCAGCTCAATGTCCTCTaGCTCAGGATCCTATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HAAEAQLSDDQQEAHNVPQLNVL*LRILFS Trigger: ACTAAATAGGATCCTGAGGCAGAGGACATTGAGCTG...AGGTACGTTGTGAGCTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCTGCAGAAGCCCAGCTGAGTGACGATCAGCAGGAAGCTCACAACGTACCTCCAGGCTGTACATTGTaGTCTCTTCATAGTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: HAAEAQLSDDQQEAHNVPPGCTL*SLHSSQ Trigger: TTGTGAACTATGAAGAGACCACAATGTACAGCCTGG...AGGTACGTTGTGAGCTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR CAA 90 bp | AGTGCGTCCTCAGCCAAGGACTTGGACACGTTTCCAGGCTGTACATaGTGGTCTCTTCATAGTTCACAAAACTCCTCTGCAGTCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SASSAKDLDTFPGCT*WSLHSSQNSSAVSE Trigger: CTCAGAGACTGCAGAGGAGTTTTGTGAACTATGAAGAGACCACAATGTACAGCCTGGAAACGTGTCCAAGTCCTTGGCTGAGGACGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR GCA 90 bp | ATACATACAGATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGACTTGTGTGGGCAGCTaGTGGCCAGGCTGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IHTDLHKWIHSADSCYALTCVGS*WPGWEE Trigger: TTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGT...CAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATCTGTATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR-3UTR CCA 90 bp | GATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGATAAAACAAGCTGCTGGCCAGGCTaGGAAGAATGGGGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: DLHKWIHSADSCYALDKTSCWPG*EEWGSQ Trigger: TTGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCT...TGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR-3UTR CCA 90 bp | ATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCCCAGGATGAAATCCAACAGAGGGTaGAGAAAGGAAGAGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: ISYRAWYVPSTHPKRPRMKSNRG*RKEELF Trigger: GAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTT...CATCCTGGGCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGGTGAGCATATAGAAGCGAGTGTCCAGGATGGAGGTCATCACCAGGCTGCCCCACCTACTAACTaGAAGTTATTCATGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: QDGEHIEASVQDGGHHQAAPPTN*KLFMMN Trigger: GTTCATCATGAATAACTTCCAGTTAGTAGGTGGGGC...AGCCTGGTGATGACCTCCATCCTGGACACTCGCTTCTATATGCTCACCATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR GCA 72 bp | AAGCGAGTGTCCAGGATGGAGGTCATCACCAGGCTCTaGCTCGGCTGGCAGACGTTGGAGGTGAAGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: KRVSRMEVITRL*LGWQTLEVKWA Trigger: AGCCCACTTCACCTCCAACGTCTGCCAGCCGAGGCAGAGCCTGGTGATGACCTCCATCCTGGACACTCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR GCA 72 bp | AGGGTTCCGAGTCTTCGTCACACTTGTGTGGGCAGCTaGTGGCCAGGCTGGGAAGAATGGGGGAGTCAACAG | + |
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Preference number: 3 (lower is better) Translates to: RVPSLRHTCVGS*WPGWEEWGSQQ Trigger: CTGTTGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR CCA 72 bp | TCCAGGATGGAGGTCATCACCAGGCTCTGCCTCGGCTaGCAGACGTTGGAGGTGAAGTGGGCTTCTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: SRMEVITRLCLG*QTLEVKWASSM Trigger: CATGGAAGAAGCCCACTTCACCTCCAACGTCTGCCAGCCGAGGCAGAGCCTGGTGATGACCTCCATCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR CCA 72 bp | GTTCCGAGTCTTCGTCACACTTGTGTGGGCAGCTGCTaGCCAGGCTGGGAAGAATGGGGGAGTCAACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: VPSLRHTCVGSC*PGWEEWGSQQH Trigger: ATGCTGTTGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR TCA 72 bp | GATCAGCAGGAAGCTCACAACGTACCTGCCCCACACTaGGTGCGTCCTCAGCCAAGGACTTGGACACGTTTC | + |
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Preference number: 3 (lower is better) Translates to: DQQEAHNVPAPH*VRPQPRTWTRF Trigger: GAAACGTGTCCAAGTCCTTGGCTGAGGACGCACTCAGTGTGGGGCAGGTACGTTGTGAGCTTCCTGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR GCA 72 bp | AGATGGCAGGCACAGTTCAGCAGGATATCCATACAGTaGACTGTGAGCGCCCCGATGGCCAAGAGGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: RWQAQFSRISIQ*TVSAPMAKRLT Trigger: TGTCAGCCTCTTGGCCATCGGGGCGCTCACAGTGCACTGTATGGATATCCTGCTGAACTGTGCCTGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR CCA 72 bp | CTTCGTCACACTTGTGTGGGCAGCTGCTGGCCAGGCTaGGAAGAATGGGGGAGTCAACAGCATGAGAACAGA | + |
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Preference number: 3 (lower is better) Translates to: LRHTCVGSCWPG*EEWGSQQHENR Trigger: TCTGTTCTCATGCTGTTGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR CCA 72 bp | AGGCTCTGCCTCGGCTGGCAGACGTTGGAGGTGAAGTaGGCTTCTTCCATGATCTGTTGTAAGTTGTCCGCC | + |
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Preference number: 3 (lower is better) Translates to: RLCLGWQTLEVK*ASSMICCKLSA Trigger: GGCGGACAACTTACAACAGATCATGGAAGAAGCCCACTTCACCTCCAACGTCTGCCAGCCGAGGCAGAGCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR TCA 72 bp | AGTTCTCAGACACTCTTGAGACGACATAGGGGACGATaGTCTCAGCTGGGACGTGGAACTGGAGGGCATAGG | + |
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Preference number: 3 (lower is better) Translates to: SSQTLLRRHRGR*SQLGRGTGGHR Trigger: CCTATGCCCTCCAGTTCCACGTCCCAGCTGAGATCATCGTCCCCTATGTCGTCTCAAGAGTGTCTGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR TCA 72 bp | CAGGTCTACGAACAGAGCCCAGTTCTCAGACACTCTTaGGACGACATAGGGGACGATGATCTCAGCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QVYEQSPVLRHS*DDIGDDDLSWD Trigger: GTCCCAGCTGAGATCATCGTCCCCTATGTCGTCTCAAGAGTGTCTGAGAACTGGGCTCTGTTCGTAGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR CAA 90 bp | CATGATGTCCTTGACAATGGTGGCACAGCTTATGTTCTCAGAGTAAAATGTGGCGCAACCAGGGGCAGGTaGCTGTGGTGTGGGGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: HDVLDNGGTAYVLRVKCGATRGR*LWCGVW Trigger: CCAGACCCCACACCACAGCAACCTGCCCCTGGTTGC...GCCACATTTTACTCTGAGAACATAAGCTGTGCCACCATTGTCAAGGACATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR-3UTR CAA 90 bp | GATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGATAAAACAGAGTCTTCGTCACACTaGTGTGGGCAGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: DLHKWIHSADSCYALDKTESSSH*CGQLLA Trigger: GGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTC...TGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR-3UTR CAA 90 bp | ATCTCGTACAGGGCTTGGTATGTCCCAAGTACACACCCTAAGAGGCCCAGGATGTTTCCAGGCTGTACATaGTGGTCTCTTCATAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: ISYRAWYVPSTHPKRPRMFPGCT*WSLHSS Trigger: TGAACTATGAAGAGACCACAATGTACAGCCTGGAAA...CATCCTGGGCCTCTTAGGGTGTGTACTTGGGACATACCAAGCCCTGTACGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR TCA 72 bp | CTTCATAGTTCACAAAACTCCTCTGCAGTCTCTGAGTaGGATGGCAGGCACAGTTCAGCAGGATATCCATAC | + |
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Preference number: 3 (lower is better) Translates to: LHSSQNSSAVSE*DGRHSSAGYPY Trigger: GTATGGATATCCTGCTGAACTGTGCCTGCCATCTCACTCAGAGACTGCAGAGGAGTTTTGTGAACTATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| 3UTR GCA 72 bp | ACAGATCTCCACAAATGGATACACAGTGCAGACTCATaGTATGCCCTGGATAAAACACAGAGCTTAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TDLHKWIHSADS*YALDKTQSLKA Trigger: GGCCTTTAAGCTCTGTGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR GCA 90 bp | GCCAGGGTTCCGAGTCTTCGTCACACTTGTGTGGGCAGCTGCTGGCCAGGCTGGGGGAGGTACTGCTGCTaGTTCTGCTGTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ARVPSLRHTCVGSCWPGWGRYCC*FCCCCC Trigger: GCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCC...CCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTTCCGAGTCTTCGTCACACTTGTGTGGGCAGCTGCTGGCCAGGCTGGGAATGCCAAGCATCAGGTaGAGACCCCCTCTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGSESSSHLCGQLLARLGMPSIR*RPPLLP Trigger: TGGCAGCAGAGGGGGTCTCCACCTGATGCTTGGCAT...TCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR CAA 72 bp | AGTGCTAGGTGCCAGGGTTCCGAGTCTTCGTCACACTaGTGTGGGCAGCTGCTGGCCAGGCTGGGAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SARCQGSESSSH*CGQLLARLGRM Trigger: CATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCTGGCACCTAGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR CCA 90 bp | GGCACAGTTCAGCAGGATATCCATACAGTGCACTGTGAGCGCCCCGATGGCCAAGCGAGGGCCCTTCTTTaGGGAGGTACTGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GTVQQDIHTVHCERPDGQARALL*GGTAAA Trigger: AGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGC...TTGGCCATCGGGGCGCTCACAGTGCACTGTATGGATATCCTGCTGAACTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| CDS-3UTR TCA 90 bp | TCACACTTGTGTGGGCAGCTGCTGGCCAGGCTGGGAAGAATGGGGGAGTCAACACCTAGAGGAGGCCTCTaGAGAATGCCAAGCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SHLCGQLLARLGRMGESTPRGGL*RMPSIR Trigger: CCTGATGCTTGGCATTCTTCAGAGGCCTCCTCTAGG...TGTTGACTCCCCCATTCTTCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR GCA 90 bp | GGCACAGTTCAGCAGGATATCCATACAGTGCACTGTGAGCGCCCCGATGGCCAAGGGAGGTACTGCTGCTaGTTCTGCTGTTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GTVQQDIHTVHCERPDGQGRYCC*FCCCCC Trigger: GCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCC...TTGGCCATCGGGGCGCTCACAGTGCACTGTATGGATATCCTGCTGAACTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTGCTCAGAGAGTGCTAGGTGCCAGGGTTCCGAGTCTTCGTCACACTTGTGCGAGGGCCCTTCTTTaGGGAGGTACTGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LCAQRVLGARVPSLRHTCARALL*GGTAAA Trigger: AGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGC...ACAAGTGTGACGAAGACTCGGAACCCTGGCACCTAGCACTCTCTGAGCACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR GCA 90 bp | CCATGTAAAAGTGGGTCTGCTGGGTCATCTCGTACAGGGCTTGGTATGTCCCAAGCGCATCAGCTTCCCTaGGAGGGCCCTTCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PCKSGSAGSSRTGLGMSQAHQLP*EGPSLG Trigger: CCCCAAAGAAGGGCCCTCGCAGGGAAGCTGATGCGC...TTGGGACATACCAAGCCCTGTACGAGATGACCCAGCAGACCCACTTTTACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| CDS-3UTR CCA 90 bp | CACGCTGCAGAAGCCCAGCTGAGTGACGATCAGCAGGAAGCTCACAACGTACCTGGGGCTGCCCCACACTaGCTAGAATTCAACAATCCA | + |
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Preference number: 4 (lower is better) Translates to: HAAEAQLSDDQQEAHNVPGAAPH*LEFNNP Trigger: TGGATTGTTGAATTCTAGCCAGTGTGGGGCAGCCCC...AGGTACGTTGTGAGCTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| CDS-3UTR GCA 90 bp | AGTACTGTGTGCTCAGAGAGTGCTAGGTGCCAGGGTTCCGAGTCTTCGTCACACTGCTGCTTCTGCTGTTaGTGCTGCCTTTTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: STVCSESARCQGSESSSHCCFCC*CCLLRR Trigger: CCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCA...GTGTGACGAAGACTCGGAACCCTGGCACCTAGCACTCTCTGAGCACACAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR GCA 90 bp | GATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGATAAAACAGCGCATCAGCTTCCCTaGGAGGGCCCTTCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DLHKWIHSADSCYALDKTAHQLP*EGPSLG Trigger: CCCCAAAGAAGGGCCCTCGCAGGGAAGCTGATGCGC...TGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS-3UTR TCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAGGTCCAGGCGGGGGATaGGGACGGCTGAGAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSGPGGG*GRLRNR Trigger: CCTGTTTCTCAGCCGTCCTCATCCCCCGCCTGGACC...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
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| CDS-3UTR GCA 90 bp | TGGATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGGCGCATCAGCTTCCCTaGGAGGGCCCTTCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WILMNTYNANPTEGGERKAHQLP*EGPSLG Trigger: CCCCAAAGAAGGGCCCTCGCAGGGAAGCTGATGCGC...CTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
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| CDS-3UTR CCA 90 bp | ACATACAGATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGAACTACCAAACTTCCTTaGTGGAGCAAGCAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TYRSPQMDTQCRLMLCPGTTKLP*WSKQGL Trigger: CAGCCCCTGCTTGCTCCACCAAGGAAGTTTGGTAGT...TCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATCTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| 3UTR CAA 72 bp | GAGGTGAAGTGGGCTTCTTCCATGATCTGTTGTAAGTaGTCCGCCAGAAACATGAAGTACACGCTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EVKWASSMICCK*SARNMKYTLQK Trigger: CTTCTGCAGCGTGTACTTCATGTTTCTGGCGGACAACTTACAACAGATCATGGAAGAAGCCCACTTCACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
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| CDS-3UTR TCA 90 bp | TGGATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGCGATGGCCAAGAGGCTaGCAGGCCCCACCAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: WILMNTYNANPTEGGERKRWPRG*QAPPTI Trigger: GATTGTTGGTGGGGCCTGTCAGCCTCTTGGCCATCG...CTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATGTACCTGCCCCACACTaGGTGCGTCCTCAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNVPAPH*VRPQPR Trigger: CCTTGGCTGAGGACGCACTCAGTGTGGGGCAGGTAC...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | ATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCGGGGATGAGGACGGCTaGGAAACAGGTCAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILMNTYNANPTEGGERKSGDEDG*ETGQAD Trigger: GTCTGCCTGACCTGTTTCTCAGCCGTCCTCATCCCC...GCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | GATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGATAAAACATGCTTCTGCTGTTGCTaGTGCCTTTTGAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLHKWIHSADSCYALDKTCFCCC*CLLRRL Trigger: CAGCCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCA...TGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
||
| CDS-3UTR GCA 90 bp | GATCTCCACAAATGGATACACAGTGCAGACTCATGCTATGCCCTGGATAAAACAGAGGCCTCTGAAGAATaGCAAGCATCAGGTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLHKWIHSADSCYALDKTEASEE*QASGGD Trigger: GTCTCCACCTGATGCTTGGCATTCTTCAGAGGCCTC...TGTTTTATCCAGGGCATAGCATGAGTCTGCACTGTGTATCCATTTGTGGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
||
| CDS-3UTR CCA 90 bp | TTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATGCGAGGGCCCTTCTTTaGGGAGGTACTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMNTYNANPTEGGERKSYARALL*GGTAAA Trigger: AGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGC...ATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAGGGAGGTACTGCTGCTaGTTCTGCTGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSGRYCC*FCCCCC Trigger: GCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCC...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATCAACCAGGGGCAGGTTaGTGTGGTGTGGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNQPGAG*CGVGSG Trigger: TCCAGACCCCACACCACAGCAACCTGCCCCTGGTTG...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAGGCAGACCAAGGCTGTaGGGACAGTCAGGTCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSGRPRL*GQSGLR Trigger: TCGTAGACCTGACTGTCCGCACAGCCTTGGTCTGCC...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATCTGCAGAAGCCCAGCTaGGTGACGATCAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNLQKPS*VTISRK Trigger: CTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAG...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATCTGCCCCACACTGAGTaGGTCCTCAGCCAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNLPHTE*VLSQGL Trigger: AAGTCCTTGGCTGAGGACGCACTCAGTGTGGGGCAG...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | TTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCTGCAGTCTCTGAGTaGGATGGCAGGCACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMNTYNANPTEGGERKSYSAVSE*DGRHSS Trigger: TGAACTGTGCCTGCCATCTCACTCAGAGACTGCAGA...ATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCATGTCCGCCAGAAACATaGAGTACACGCTGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSCPPET*STRCRS Trigger: GCTTCTGCAGCGTGTACTTCATGTTTCTGGCGGACA...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAGGGTGATGCTGGCCTaGGTGTCTGTCCCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNRVMLA*VSVPNF Trigger: GAAGTTTGGGACAGACACTCAGGCCAGCATCACCCT...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | TGGATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGACTGGAGGGCATAGGTaGAGAAGATGCCCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WILMNTYNANPTEGGERKTGGHR*RRCPQS Trigger: ACTCTGTGGGCATCTTCTTCACCTATGCCCTCCAGT...CTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAACGACATAGGGGACGATaGTCTCAGCTGGGACGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYNANPTEGGERKSYSNKRHRGR*SQLGRG Trigger: TCCACGTCCCAGCTGAGATCATCGTCCCCTATGTCG...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTGCTGCTTCTGCTGTTaGTGCTGCCTTTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILMNTYNANPTEGGERKSCCFCC*CCLLRR Trigger: CCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCA...GCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAGGATATCCATACAGTaGACTGTGAGCGCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSRISIQ*TVSAPM Trigger: CATCGGGGCGCTCACAGTGCACTGTATGGATATCCT...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | CATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAAACAGCGGGGAACTGCTaGGGGCTCTTCATCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIMQIQQRVEKGRAIQIKTAGNC*GLFIWL Trigger: AAGCCAGATGAAGAGCCCGCAGCAGTTCCCCGCTGT...TTTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATTCACTGCTGAGGGGCTaGCCCACACTGGCTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNSLLRG*PTLARI Trigger: AATTCTAGCCAGTGTGGGGCAGCCCCTCAGCAGTGA...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAACACCTGTGGGTTCTaGATGAGCACCAGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNTYNANPTEGGERKSYSNTCGF*MSTSRM Trigger: CATCCTGCTGGTGCTCATCCAGAACCCACAGGTGTT...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | ACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAGGAAGGGCAGGATGGTaGGCATATAGAAGCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THIMQIQQRVEKGRAIQIGRAGW*AYRSEC Trigger: ACACTCGCTTCTATATGCTCACCATCCTGCCCTTCC...TATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATATGCTTCTGCTGTTGCTaGTGCCTTTTGAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THIMQIQQRVEKGRAIQICFCCC*CLLRRL Trigger: CAGCCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCA...TATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020502.9 ENSMUST00000128244.8 |
||
| CDS-3UTR GCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATTGCTTCTGCTGTTGCTaGTGCCTTTTGAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNCFCCC*CLLRRL Trigger: CAGCCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCA...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020502.9 ENSMUST00000128244.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCCTGTGGTGTGGGGTCTaGATGAGATACTCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILMNTYNANPTEGGERKSLWCGV*MRYSKI Trigger: GATCTTCGAGTATCTCATCCAGACCCCACACCACAG...GCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | TTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATAGTGGGCTTCTTCCATaGTCTGTTGTAAGTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LMNTYNANPTEGGERKSYSGLLP*SVVSCP Trigger: CGGACAACTTACAACAGATCATGGAAGAAGCCCACT...ATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCGTCCCAGGAAGCCTGTaGCAATGTTGCTTTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILMNTYNANPTEGGERKSVPGSL*QCCFST Trigger: TGTTGAAAAGCAACATTGGCACAGGCTTCCTGGGAC...GCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CCA 90 bp | CATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAACCTCAGCCAAGGACTTaGACACGTTTCCAGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIMQIQQRVEKGRAIQIKPQPRT*TRFQAV Trigger: TACAGCCTGGAAACGTGTCCAAGTCCTTGGCTGAGG...TTTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CCA 90 bp | TGGATTTTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGACGTTGGAGGTGAAGTaGGCTTCTTCCATGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WILMNTYNANPTEGGERKTLEVK*ASSMIC Trigger: ACAGATCATGGAAGAAGCCCACTTCACCTCCAACGT...CTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAAAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATATCAGCTTGACTGACTaGTACAGCCAGCAAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNISLTD*YSQQMG Trigger: GCCCATTTGCTGGCTGTACCAGTCAGTCAAGCTGAT...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR GCA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATGTCCCAGGAAGCCTGTaGCAATGTTGCTTTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NTYNANPTEGGERKSYSNVPGSL*QCCFST Trigger: TGTTGAAAAGCAACATTGGCACAGGCTTCCTGGGAC...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020502.9 ENSMUST00000128244.8 |
||
| CDS-3UTR GCA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAGAAAGTCTTCCAGTTTaGAACCAGGGGCAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYNANPTEGGERKSYSNKESLPV*NQGQVA Trigger: AGCAACCTGCCCCTGGTTGCAAACTGGAAGACTTTC...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR TCA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAGTACATCAGCTTGACTaGCTGGTACAGCCAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TYNANPTEGGERKSYSNKVHQLD*LVQPAN Trigger: ATTTGCTGGCTGTACCAGTCAGTCAAGCTGATGTAC...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CCA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAATCTCGTACAGGGCTTaGTATGTCCCAAGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: TYNANPTEGGERKSYSNKISYRA*YVPSTH Trigger: GTGTGTACTTGGGACATACCAAGCCCTGTACGAGAT...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CCA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAACCAGGCTGTACATTGTaGTCTCTTCATAGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TYNANPTEGGERKSYSNKPGCTL*SLHSSQ Trigger: TTGTGAACTATGAAGAGACCACAATGTACAGCCTGG...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTCCGAGTCTTCGTCACACTTGTGTGGGCAGCTGCTGGCCAGGCTGGGACTGCTGCTTCTGCTGTaGCTGCTGCCTTTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGSESSSHLCGQLLARLGLLLLL*LLPFEE Trigger: CTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAG...TCCCAGCCTGGCCAGCAGCTGCCCACACAAGTGTGACGAAGACTCGGAACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
||
| CDS-3UTR CAA 90 bp | CACGCTGCAGAAGCCCAGCTGAGTGACGATCAGCAGGAAGCTCACAACGTACCTCTGCTGCTTCTGCTGTaGCTGCTGCCTTTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HAAEAQLSDDQQEAHNVPLLLLL*LLPFEE Trigger: CTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAG...AGGTACGTTGTGAGCTTCCTGCTGATCGTCACTCAGCTGGGCTTCTGCAGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128244.8 |
||
| CDS-3UTR CAA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAGCAACCAGGGGCAGGTaGCTGTGGTGTGGGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MNTYNANPTEGGERKSYSATRGR*LWCGVW Trigger: CCAGACCCCACACCACAGCAACCTGCCCCTGGTTGC...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | TTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATCTCGGCTGGCAGACGTaGGAGGTGAAGTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMNTYNANPTEGGERKSYLGWQT*EVKWAS Trigger: AGAAGCCCACTTCACCTCCAACGTCTGCCAGCCGAG...ATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | ATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAGAAAGTCTTCCAGTTaGCAACCAGGGGCAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MNTYNANPTEGGERKSYSRKSSS*QPGAGC Trigger: GCAACCTGCCCCTGGTTGCAAACTGGAAGACTTTCT...TGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAACTGCTGCTTCTGCTGTaGCTGCTGCCTTTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TYNANPTEGGERKSYSNKLLLLL*LLPFEE Trigger: CTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAG...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020502.9 ENSMUST00000128244.8 |
||
| CDS-3UTR CAA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAATCCTCAGCCAAGGACTaGGACACGTTTCCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TYNANPTEGGERKSYSNKSSAKD*DTFPGC Trigger: ACAGCCTGGAAACGTGTCCAAGTCCTTGGCTGAGGA...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | TTGATGAACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATCATCTCGTACAGGGCTaGGTATGTCCCAAGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: LMNTYNANPTEGGERKSYHLVQG*VCPKYT Trigger: TGTGTACTTGGGACATACCAAGCCCTGTACGAGATG...ATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTTCATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | AACACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAGTTCTCAGACACTCTaGAGACGACATAGGGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: NTYNANPTEGGERKSYSNSSQTL*RRHRGR Trigger: TCGTCCCCTATGTCGTCTCAAGAGTGTCTGAGAACT...ATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | CATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAACTGATCATGATGTCCTaGACAATGGTGGCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HIMQIQQRVEKGRAIQIKLIMMS*TMVAQL Trigger: AAGCTGTGCCACCATTGTCAAGGACATCATGATCAG...TTTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
||
| CDS-3UTR CAA 90 bp | ACATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAATTTCCAGGCTGTACATaGTGGTCTCTTCATAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TYNANPTEGGERKSYSNKFPGCT*WSLHSS Trigger: TGAACTATGAAGAGACCACAATGTACAGCCTGGAAA...TTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
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| CDS-3UTR CAA 90 bp | CATATAATGCAAATCCAACAGAGGGTGGAGAAAGGAAGAGCTATTCAAATAAAAATGATCTGTTGTAAGTaGTCCGCCAGAAACATGAAG | + |
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Preference number: 5 (lower is better) Translates to: HIMQIQQRVEKGRAIQIKMICCK*SARNMK Trigger: CTTCATGTTTCTGGCGGACAACTTACAACAGATCAT...TTTTATTTGAATAGCTCTTCCTTTCTCCACCCTCTGTTGGATTTGCATTATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020502.9 |
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| CDS GCA 72 bp | CCCTGCGAGGGCCCTTCTTTGGGGAGGTACTGCTGCTaGTTCTGCTGTTGCTGCTGCCTTTTGAGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PCEGPSLGRYCC*FCCCCCLLRRL Trigger: CAGCCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020502.9 ENSMUST00000069816.6 ENSMUST00000128244.8 |
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| CDS GCA 72 bp | CTTCCCTGCGAGGGCCCTTCTTTGGGGAGGTACTGCTaGTGCTTCTGCTGTTGCTGCTGCCTTTTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPCEGPSLGRYC*CFCCCCCLLRR Trigger: CCTCCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGCAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020502.9 ENSMUST00000069816.6 ENSMUST00000128244.8 |
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| CDS GCA 72 bp | CAGCTTCCCTGCGAGGGCCCTTCTTTGGGGAGGTACTaGTGCTGCTTCTGCTGTTGCTGCTGCCTTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: QLPCEGPSLGRY*CCFCCCCCLLR Trigger: CCTCAAAAGGCAGCAGCAACAGCAGAAGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGCAGGGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020502.9 ENSMUST00000069816.6 ENSMUST00000128244.8 |
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| CDS CAA 72 bp | CCATTAGCGCATCAGCTTCCCTGCGAGGGCCCTTCTTaGGGGAGGTACTGCTGCTGCTTCTGCTGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLAHQLPCEGPS*GRYCCCFCCCC Trigger: GCAGCAACAGCAGAAGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGCAGGGAAGCTGATGCGCTAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069816.6 |
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| CDS CAA 72 bp | ACATTAGCGCATCAGCTTCCCTGCGAGGGCCCTTCTTaGGGGAGGTACTGCTGCTGCTTCTGCTGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLAHQLPCEGPS*GRYCCCFCCCC Trigger: GCAGCAACAGCAGAAGCAGCAGCAGTACCTCCCCAAAGAAGGGCCCTCGCAGGGAAGCTGATGCGCTAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020502.9 ENSMUST00000128244.8 |
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