Pregenerated sensors for SLC36A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020261Ensembl transcript IDs: ENSMUST00000020499.14, ENSMUST00000108867.2, ENSMUST00000108872.9, ENSMUST00000147506.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGACAGTGGGAGGGGTCAGGAGGGCTCTGACTCAGGGCTCCTGTaGGCGCCTGGGCTGTGTGTGGCGCCTGGCACTATGTGCTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: TDSGRGQEGSDSGLL*APGLCVAPGTMCLA Trigger: TGCTAAGCACATAGTGCCAGGCGCCACACACAGCCCAGGCGCCCACAGGAGCCCTGAGTCAGAGCCCTCCTGACCCCTCCCACTGTCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | GGCCCCAGAAAGCCTCAGTGTGCCAGTGGGAATGGTGGCTGGGGCTaGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGC | + |
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Preference number: 1 (lower is better) Translates to: GPRKPQCASGNGGWG*LAGKANPCPEPLSG Trigger: GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGCACACTGAGGCTTTCTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | GAAGGCACACCACACCGTGTCAGGCCAGGGGCCCTGAAGAGTAGCTaGCCTTGGACAATGGGTCTAGACCTGGGTAGGAGCGCCTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: EGTPHRVRPGALKSS*PWTMGLDLGRSACK Trigger: TTTACAGGCGCTCCTACCCAGGTCTAGACCCATTGTCCAAGGCCAGCTACTCTTCAGGGCCCCTGGCCTGACACGGTGTGGTGTGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | TCCCATATCAGGCCCCAGAAAGCCTCAGTGTGCCAGTGGGAATGGTaGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SHIRPQKASVCQWEW*LGLASRESKPLSRA Trigger: GGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGCACACTGAGGCTTTCTGGGGCCTGATATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | GATGTGGGCCATACCAAGGTACCAAGGAAGCTGCCCTCAGCCAAATaGTACAGAAGGCACACCACACCGTGTCAGGCCAGGGGCCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: DVGHTKVPRKLPSAK*YRRHTTPCQARGPE Trigger: TTCAGGGCCCCTGGCCTGACACGGTGTGGTGTGCCTTCTGTAGCATTTGGCTGAGGGCAGCTTCCTTGGTACCTTGGTATGGCCCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | GGTTCCCATATCAGGCCCCAGAAAGCCTCAGTGTGCCAGTGGGAATaGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GSHIRPQKASVCQWE*WLGLASRESKPLSR Trigger: TCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGCACACTGAGGCTTTCTGGGGCCTGATATGGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | CACAGAAGCATGGGGCTTCCAGAGGCGGTGCATGCTCACATGATCTaGTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGT | + |
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Preference number: 1 (lower is better) Translates to: HRSMGLPEAVHAHMI*LRSLSQLGVAAHAS Trigger: ACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCCCATGCTTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | CCCAAGGGTCCAATGCCAGATAGAGCAGTGCCCAGGCAGCAACCCTaGCTTTTTCCAGAGGCTGGACTATACCTGAGGATGTGGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: PKGPMPDRAVPRQQP*LFPEAGLYLRMWGH Trigger: GTGTCCCCACATCCTCAGGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCTGCCTGGGCACTGCTCTATCTGGCATTGGACCCTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | ACCACTCTGTCTGGTTCCCATATCAGGCCCCAGAAAGCCTCAGTGTaGCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: TTLSGSHIRPQKASV*QWEWWLGLASRESK Trigger: TTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGCACACTGAGGCTTTCTGGGGCCTGATATGGGAACCAGACAGAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | AACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACTACTaGGAGACACACAGGGTGAGGCTGGTGGAGGGAGCACACCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NSGDMRPCLRMWGHY*ETHRVRLVEGAHPD Trigger: ATCTGGGTGTGCTCCCTCCACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
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| 3UTR CCA 90 bp | CAGCAACCCTGCCTTTTTCCAGAGGCTGGACTATACCTGAGGATGTaGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QQPCLFPEAGLYLRM*GHYWETHRVRLVEG Trigger: TCCCTCCACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | ACACCACACCGTGTCAGGCCAGGGGCCCTGAAGAGTAGCTGGCCTTaGACAATGGGTCTAGACCTGGGTAGGAGCGCCTGTAAAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: TPHRVRPGALKSSWP*TMGLDLGRSACKSS Trigger: TGAACTTTTACAGGCGCTCCTACCCAGGTCTAGACCCATTGTCCAAGGCCAGCTACTCTTCAGGGCCCCTGGCCTGACACGGTGTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | CCTGGGCTGTGTGTGGCGCCTGGCACTATGTGCTTAGCAGCTTCCTaGTGTCCATCCAGAAAGGCCCTGACCTTGCTCAAAGAGTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PGLCVAPGTMCLAAS*CPSRKALTLLKESG Trigger: ACCTGACTCTTTGAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGTGCCAGGCGCCACACACAGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | ATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCGGTGCATaGTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: MNGSPQKHGASRGGA*SHDLLEVSEPAGSG Trigger: GCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | CCAAGGTCCCCTGGAGCAGGTGTCTTAGTGGAAGGAGAAGCCAAGTaGCAAGCTGCTGAAGCTGTGATGCCAGGTCTGAAGTCAAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PRSPGAGVLVEGEAK*QAAEAVMPGLKSRA Trigger: GGCTCTTGACTTCAGACCTGGCATCACAGCTTCAGCAGCTTGGCACTTGGCTTCTCCTTCCACTAAGACACCTGCTCCAGGGGACCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | GACATGACCCATGCATGTTCGCAATGCACATCTGAAGCTCTGACATaGCCCACGCGTGTACGCAATGCACATCCAGGTAGGCGCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: DMTHACSQCTSEALT*PTRVRNAHPGRRQH Trigger: GTGCTGGCGCCTACCTGGATGTGCATTGCGTACACGCGTGGGGCATGTCAGAGCTTCAGATGTGCATTGCGAACATGCATGGGTCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | CTTTTTCCAGAGGCTGGACTATACCTGAGGATGTGGGGACACTACTaGGAGACACACAGGGTGAGGCTGGTGGAGGGAGCACACCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LFPEAGLYLRMWGHY*ETHRVRLVEGAHPD Trigger: ATCTGGGTGTGCTCCCTCCACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGGTATAGTCCAGCCTCTGGAAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | CTTTGGTCACTTTCCAGCCTGAGACTTCAGAAAGCAAGGCGTCTGTaGGTCCCAGCTGGAACCAGGCCACATAAGCACCTGTGGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: LWSLSSLRLQKARRL*VPAGTRPHKHLWGC Trigger: GCATCCCCACAGGTGCTTATGTGGCCTGGTTCCAGCTGGGACTCACAGACGCCTTGCTTTCTGAAGTCTCAGGCTGGAAAGTGACCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | TCATCTAGCCCAGGTTACCCAAGGGTCCAATGCCAGATAGAGCAGTaGCCAGGCAGCAACCCTGCCTTTTTCCAGAGGCTGGACTATACC | + |
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Preference number: 1 (lower is better) Translates to: SSSPGYPRVQCQIEQ*PGSNPAFFQRLDYT Trigger: GGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCTGCCTGGGCACTGCTCTATCTGGCATTGGACCCTTGGGTAACCTGGGCTAGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | CTGGCCTCTGACTTTGGGTACAGACAAGGAATGGGCTGGCAAGGATaGGGCATGTCTGCCTCTGGGGCATCTGGATTCAGGCTTAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LASDFGYRQGMGWQG*GMSASGASGFRLSF Trigger: GAAACTAAGCCTGAATCCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTGTACCCAAAGTCAGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR GCA 90 bp | GCAAGAGGTCAAAAGATGTGGGCCATACCAAGGTACCAAGGAAGCTaGCCTCAGCCAAATGCTACAGAAGGCACACCACACCGTGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARGQKMWAIPRYQGS*PQPNATEGTPHRVR Trigger: CCTGACACGGTGTGGTGTGCCTTCTGTAGCATTTGGCTGAGGGCAGCTTCCTTGGTACCTTGGTATGGCCCACATCTTTTGACCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | AAGTTCAGAATAGACTTTCTTCCCACCCAGGAAGCCAAGCTCAGGTaGCTTCTAAGAGAGAGCCTGGCCCACAGTTGGGTTGCTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: KFRIDFLPTQEAKLR*LLRESLAHSWVAGQ Trigger: CTGGCCAGCAACCCAACTGTGGGCCAGGCTCTCTCTTAGAAGCCACCTGAGCTTGGCTTCCTGGGTGGGAAGAAAGTCTATTCTGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | TGGAGCAGGTGTCTTAGTGGAAGGAGAAGCCAAGTGCCAAGCTGCTaGAGCTGTGATGCCAGGTCTGAAGTCAAGAGCCTGAACCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: WSRCLSGRRSQVPSC*SCDARSEVKSLNPK Trigger: CTTAGGGTTCAGGCTCTTGACTTCAGACCTGGCATCACAGCTTCAGCAGCTTGGCACTTGGCTTCTCCTTCCACTAAGACACCTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | ATACACGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATaGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCGGTGCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: IHEYFRVPIWSQSHE*KSTEAWGFQRRCML Trigger: GAGCATGCACCGCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | ATCCTGACATCAACAGGGGAGCAGTGGCAAGTCATGGACTCTCAGTaGCCTCTAAAGGCACACCCTAAGATGACTGACCTAGAAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ILTSTGEQWQVMDSQ*PLKAHPKMTDLEAR Trigger: CCTGGCTTCTAGGTCAGTCATCTTAGGGTGTGCCTTTAGAGGCCACTGAGAGTCCATGACTTGCCACTGCTCCCCTGTTGATGTCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | ATGAGACAGCCTAAGGACAGGCTCTGGGATCTAGCTTCAGACCACTaGTCACACTTAGCACAAGACTTCCAGGGGAAGAGAGCAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: MRQPKDRLWDLASDH*SHLAQDFQGKRADR Trigger: CCTGTCTGCTCTCTTCCCCTGGAAGTCTTGTGCTAAGTGTGATCAGTGGTCTGAAGCTAGATCCCAGAGCCTGTCCTTAGGCTGTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | TACTTTGGAAAATTAAATTCTCAAGCCAGCTTGGCGCCACCCTCCTaGTTGCCACGTCCGACCACTCTGTCTGGTTCCCATATCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: YFGKLNSQASLAPPS*LPRPTTLSGSHIRP Trigger: GGGCCTGATATGGGAACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTTGAGAATTTAATTTTCCAAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | ATCCAGAAAGGCCCTGACCTTGCTCAAAGAGTCAGGTCACCAAACTaGCAGTACCTCAGGAGTATAGCAAGAGGTCAAAAGATGTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: IQKGPDLAQRVRSPN*QYLRSIARGQKMWA Trigger: GGCCCACATCTTTTGACCTCTTGCTATACTCCTGAGGTACTGTCAGTTTGGTGACCTGACTCTTTGAGCAAGGTCAGGGCCTTTCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CCA 90 bp | ATCACATGCTTCCCAGCAAGTGCTCACATTCAAGTTTTCGATAACTaGCCTCTGACTTTGGGTACAGACAAGGAATGGGCTGGCAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: ITCFPASAHIQVFDN*PLTLGTDKEWAGKD Trigger: ATCCTTGCCAGCCCATTCCTTGTCTGTACCCAAAGTCAGAGGCCAGTTATCGAAAACTTGAATGTGAGCACTTGCTGGGAAGCATGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR TCA 90 bp | TGCTGTAAACATGATCTGAGCTCTGCACTTCCTGGAAGGATCAAGTaGAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CCKHDLSSALPGRIK*NNGIQRADTDGREK Trigger: TTTCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTCCAGGAAGTGCAGAGCTCAGATCATGTTTACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTGGGCTCCTGTGGGCGCCTaGGCTGTGTGTGGCGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QTRNGLARMGHVCLWGIWAPVGA*AVCGAW Trigger: CCAGGCGCCACACACAGCCCAGGCGCCCACAGGAGC...CCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTGGGTCAGGAGGGCTCTaGCTCAGGGCTCCTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVGSGGL*LRAPVG Trigger: GCCCACAGGAGCCCTGAGTCAGAGCCCTCCTGACCC...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTCGGGACACACAGAAAAAGAAGACACCGGCCAGACGGAAGCTGGCGCGGCGGCACCATCACAAGTaGAGGGGCTGCTCCCCGCCC | + |
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Preference number: 2 (lower is better) Translates to: MARDTQKKKTPARRKLARRHHHK*RGCSPP Trigger: GGGCGGGGAGCAGCCCCTCCACTTGTGATGGTGCCG...CCGCGCCAGCTTCCGTCTGGCCGGTGTCTTCTTTTTCTGTGTGTCCCGAGCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCCCCAGGCAGCAACCCTaGCTTTTTCCAGAGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GWGWLAGKANPCPEPLSGPRQQP*LFPEAG Trigger: TCCAGCCTCTGGAAAAAGGCAGGGTTGCTGCCTGGG...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGCAGCGAGAAGGGGCTTaGCTGCAAGGTTGGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: SSQLGATLLIATSDHSVWQREGA*LQGWAT Trigger: AGTGGCCCAACCTTGCAGCCAAGCCCCTTCTCGCTG...CCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTCGCCTGGGCTGTGTGTaGCGCCTGGCACTATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVRLGCV*RLALCA Trigger: AGCACATAGTGCCAGGCGCCACACACAGCCCAGGCG...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCGCAAGGCAGGGATTCTaGTCTCTCCCCAGGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: GWGWLAGKANPCPEPLSGARQGF*SLPRNC Trigger: ACAGTTCCTGGGGAGAGAGCAGAATCCCTGCCTTGC...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR TCA 90 bp | CAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTGGCATCTGGCTCCAAACTaGCAGTGGGAGGGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QTRNGLARMGHVCLWGIWHLAPN*QWEGSG Trigger: TCCTGACCCCTCCCACTGTCAGTTTGGAGCCAGATG...CCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGATGCCAGATAGAGCAGTaGCCAGGCAGCAACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PEAVHAHMICLRSLSQLGCQIEQ*PGSNPA Trigger: GGCAGGGTTGCTGCCTGGGCACTGCTCTATCTGGCA...TCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCACAAGTGCCAAGCTGCTaGAGCTGTGATGCCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ASGNGGWGWLAGKANPCPQVPSC*SCDARS Trigger: AGACCTGGCATCACAGCTTCAGCAGCTTGGCACTTG...TGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCTCGATAACTGGCCTCTaGCTTTGGGTACAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: GWGWLAGKANPCPEPLSGSITGL*LWVQTR Trigger: CCTTGTCTGTACCCAAAGTCAGAGGCCAGTTATCGA...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGATGTGGGGACACTACTaGGAGACACACAGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: EAVHAHMICLRSLSQLGVMWGHY*ETHRVR Trigger: CCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACAT...CACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGCTTGGCTGCAAGGTTaGGCCACTAGCTTCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ASGNGGWGWLAGKANPCPAWLQG*ATSFCQ Trigger: TTGACAGAAGCTAGTGGCCCAACCTTGCAGCCAAGC...TGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR CAA 90 bp | AGAAGCATGGGGCTTCCAGAGGCGGTGCATGCTCACATGATCTGCTaGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: RSMGLPEAVHAHMIC*RSLSQLGVAAHASN Trigger: GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCCCATGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGCGAGAAGAGGTGACGTaGCCTGTGGGTTCCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRREEVT*PVGSPS Trigger: ACTTGGGGAACCCACAGGCCACGTCACCTCTTCTCG...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
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| 3UTR-3UTR CCA 90 bp | ACTATGTGCTTAGCAGCTTCCTGGTGTCCATCCAGAAAGGCCCTGACCTTGCTCAGCCTGGCCCACAGTTaGGTTGCTGGCCAGCGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TMCLAASWCPSRKALTLLSLAHS*VAGQRL Trigger: TAGACGCTGGCCAGCAACCCAACTGTGGGCCAGGCT...GAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CAA 90 bp | GAGCCTGGCCCACAGTTGGGTTGCTGGCCAGCGTCTAAACCTACTTaGGTCACTTTCCAGCCTGAGACTTCAGAAAGCAAGGCGTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EPGPQLGCWPASKPT*VTFQPETSESKASV Trigger: CACAGACGCCTTGCTTTCTGAAGTCTCAGGCTGGAAAGTGACCAAAGTAGGTTTAGACGCTGGCCAGCAACCCAACTGTGGGCCAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTATGTGCTTAGCAGCTTCCTGGTGTCCATCCAGAAAGGCCCTGACCTTGCTCAAAGCAAGGCGTCTGTaGGTCCCAGCTGGAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TMCLAASWCPSRKALTLLKARRL*VPAGTR Trigger: CCTGGTTCCAGCTGGGACTCACAGACGCCTTGCTTT...GAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CCA 90 bp | TACAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTCAGGACTCAGCTGGGTaGAACAGTGAGGTACAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: YRQGMGWQGWGMSASGASQDSAG*NSEVQH Trigger: ATGCTGTACCTCACTGTTCCACCCAGCTGAGTCCTG...AGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGATGCTTCCCAGCAAGTaGTCACATTCAAGTTTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: SSQLGATLLIATSDHSVWMLPSK*SHSSFR Trigger: TCGAAAACTTGAATGTGAGCACTTGCTGGGAAGCAT...CCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CAA 90 bp | CATAATAGGGGCAGGTATGGGCCACAGTTAGTGTTTAGTGGTTCCTaGGAAGCCCAGGATACAGAGGCAGCTTGGGGCAAGGCAGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: HNRGRYGPQLVFSGS*EAQDTEAAWGKAGI Trigger: AATCCCTGCCTTGCCCCAAGCTGCCTCTGTATCCTGGGCTTCCAAGGAACCACTAAACACTAACTGTGGCCCATACCTGCCCCTATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCATGTGGGGACACTACTaGGAGACACACAGGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPIWSQSHEWKSTEAWGFMWGHY*ETHRVR Trigger: CCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACAT...GAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR CAA 90 bp | ACACACACACACATAACCCAGAGATGGAGAGCCAACAGCTGTCCTTaGGGAATCCTGACATCAACAGGGGAGCAGTGGCAAGTCATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: THTHITQRWRANSCP*GILTSTGEQWQVMD Trigger: GTCCATGACTTGCCACTGCTCCCCTGTTGATGTCAGGATTCCCAAAGGACAGCTGTTGGCTCTCCATCTCTGGGTTATGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCAGGCTGGACTATACCTaGGGATGTGGGGACACTACT | + |
|
Preference number: 2 (lower is better) Translates to: VPIWSQSHEWKSTEAWGFRLDYT*GCGDTT Trigger: AGTAGTGTCCCCACATCCTCAGGTATAGTCCAGCCT...GAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTATGTGCTTAGCAGCTTCCTGGTGTCCATCCAGAAAGGCCCTGACCTTGCTCAGGTACCAAGGAAGCTaGCCTCAGCCAAATGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: TMCLAASWCPSRKALTLLRYQGS*PQPNAT Trigger: TGTAGCATTTGGCTGAGGGCAGCTTCCTTGGTACCT...GAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTATGTGCTTAGCAGCTTCCTGGTGTCCATCCAGAAAGGCCCTGACCTTGCTCATGGAGTCAGTCTCATaGATGGAAGTCCACAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TMCLAASWCPSRKALTLLMESVS*MEVHRS Trigger: GCTTCTGTGGACTTCCATTCATGAGACTGACTCCAT...GAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTGGTTGTCTATATTGTTCTaGCCAAGCTCCCATTTATCT | + |
|
Preference number: 2 (lower is better) Translates to: QTRNGLARMGHVCLWGIWLSILF*PSSHLS Trigger: AGATAAATGGGAGCTTGGGCAGAACAATATAGACAA...CCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGATCAAGTGAAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGAGGTACAGACAAGGAATaGGCTGGCAAGGATGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EGSSETMESKEQTLTGGRGTDKE*AGKDGA Trigger: TGCCCCATCCTTGCCAGCCCATTCCTTGTCTGTACC...TCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGATCAAGTGAAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGAGAAGGAGAAGCCAAGTaGCAAGCTGCTGAAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGSSETMESKEQTLTGGREGEAK*QAAEAV Trigger: CACAGCTTCAGCAGCTTGGCACTTGGCTTCTCCTTC...TCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGATCAAGTGAAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGACCTAAGGACAGGCTCTaGGATCTAGCTTCAGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: EGSSETMESKEQTLTGGRPKDRL*DLASDH Trigger: GTGGTCTGAAGCTAGATCCCAGAGCCTGTCCTTAGG...TCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGATCAAGTGAAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGAAAGTCAGACAGCAGATaGAAACCTTCAGCATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: EGSSETMESKEQTLTGGRKSDSR*KPSAFR Trigger: CCTGAATGCTGAAGGTTTCCATCTGCTGTCTGACTT...TCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CAA 90 bp | GCCACTAGCTTCTGTCAAACACAAAAGCAGCACTCTGATAAATTCTaGCTTCTTTCTCTAACTCGAGTTTCAAGGCAAATCCTATCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: ATSFCQTQKQHSDKF*LLSLTRVSRQILSV Trigger: TACAGATAGGATTTGCCTTGAAACTCGAGTTAGAGAAAGAAGCAAGAATTTATCAGAGTGCTGCTTTTGTGTTTGACAGAAGCTAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCACAGCGAGAAGGGGCTaGGCTGCAAGGTTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GWGWLAGKANPCPEPLSGTARRG*AARLGH Trigger: GTGGCCCAACCTTGCAGCCAAGCCCCTTCTCGCTGT...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | AGGGCTCCTGTGGGCGCCTGGGCTGTGTGTGGCGCCTaGCACTATGTGCTTAGCAGCTTCCTGGTGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RAPVGAWAVCGA*HYVLSSFLVSI Trigger: GATGGACACCAGGAAGCTGCTAAGCACATAGTGCCAGGCGCCACACACAGCCCAGGCGCCCACAGGAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | CCACACCGTGTCAGGCCAGGGGCCCTGAAGAGTAGCTaGCCTTGGACAATGGGTCTAGACCTGGGTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PHRVRPGALKSS*PWTMGLDLGRS Trigger: GCTCCTACCCAGGTCTAGACCCATTGTCCAAGGCCAGCTACTCTTCAGGGCCCCTGGCCTGACACGGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | AGGCCCCAGAAAGCCTCAGTGTGCCAGTGGGAATGGTaGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RPQKASVCQWEW*LGLASRESKPL Trigger: CAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGCACACTGAGGCTTTCTGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | ATGGGGCTTCCAGAGGCGGTGCATGCTCACATGATCTaGTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MGLPEAVHAHMI*LRSLSQLGVAA Trigger: AGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | GCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTaGTTCCCATATCAGGCCCCAGAAAGCCTCAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ATLLIATSDHSV*FPYQAPESLSV Trigger: CACACTGAGGCTTTCTGGGGCCTGATATGGGAACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | TCAGTCTCATCTAGCCCAGGTTACCCAAGGGTCCAATaGCAGATAGAGCAGTGCCCAGGCAGCAACCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVSSSPGYPRVQ*QIEQCPGSNPA Trigger: GGCAGGGTTGCTGCCTGGGCACTGCTCTATCTGGCATTGGACCCTTGGGTAACCTGGGCTAGATGAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | AGTGGTTCCTTGGAAGCCCAGGATACAGAGGCAGCTTaGGGCAAGGCAGGGATTCTGCTCTCTCCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGSLEAQDTEAA*GKAGILLSPQE Trigger: TTCCTGGGGAGAGAGCAGAATCCCTGCCTTGCCCCAAGCTGCCTCTGTATCCTGGGCTTCCAAGGAACCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGGGATACAGAGGCAGCTaGGGGCAAGGCAGGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRGYRGS*GQGRDS Trigger: AGAATCCCTGCCTTGCCCCAAGCTGCCTCTGTATCC...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTGGGCGTCTAAACCTACTTaGGTCACTTTCCAGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTRNGLARMGHVCLWGIWASKPT*VTFQPE Trigger: CTCAGGCTGGAAAGTGACCAAAGTAGGTTTAGACGC...CCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | AGTCCACAGAAGCATGGGGCTTCCAGAGGCGGTGCATaGTCACATGATCTGCTTGAGGTCTCTGAGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPQKHGASRGGA*SHDLLEVSEPA Trigger: AGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCCCATGCTTCTGTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | CATACCAAGGTACCAAGGAAGCTGCCCTCAGCCAAATaGTACAGAAGGCACACCACACCGTGTCAGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTKVPRKLPSAK*YRRHTTPCQAR Trigger: CCTGGCCTGACACGGTGTGGTGTGCCTTCTGTAGCATTTGGCTGAGGGCAGCTTCCTTGGTACCTTGGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | CAGGTGGGCGGGCGGGCATTAGAAGGGGGTAGTGAGTaGTGTAAACATGATCTGAGCTCTGCACTTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QVGGRALEGGSE*CKHDLSSALPG Trigger: TCCAGGAAGTGCAGAGCTCAGATCATGTTTACAGCACTCACTACCCCCTTCTAATGCCCGCCCGCCCACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | AGTGCCCAGGCAGCAACCCTGCCTTTTTCCAGAGGCTaGACTATACCTGAGGATGTGGGGACACTACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAQAATLPFSRG*TIPEDVGTLLG Trigger: TCCCAGTAGTGTCCCCACATCCTCAGGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCTGCCTGGGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | GACTTTGGGTACAGACAAGGAATGGGCTGGCAAGGATaGGGCATGTCTGCCTCTGGGGCATCTGGATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DFGYRQGMGWQG*GMSASGASGFR Trigger: CCTGAATCCAGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTGTACCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAAGCCCATCGTCATCCTaGACTACACAGCAAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PEAVHAHMICLRSLSQLGSPSSS*TTQQAS Trigger: ACTTGCTTGCTGTGTAGTCAAGGATGACGATGGGCT...TCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | AGCAACCCTGCCTTTTTCCAGAGGCTGGACTATACCTaGGGATGTGGGGACACTACTGGGAGACACACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SNPAFFQRLDYT*GCGDTTGRHTG Trigger: CCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | CCAATGCCAGATAGAGCAGTGCCCAGGCAGCAACCCTaGCTTTTTCCAGAGGCTGGACTATACCTGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PMPDRAVPRQQP*LFPEAGLYLRM Trigger: CATCCTCAGGTATAGTCCAGCCTCTGGAAAAAGGCAGGGTTGCTGCCTGGGCACTGCTCTATCTGGCATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | CCTGGAGCAGGTGTCTTAGTGGAAGGAGAAGCCAAGTaGCAAGCTGCTGAAGCTGTGATGCCAGGTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGAGVLVEGEAK*QAAEAVMPGLK Trigger: CTTCAGACCTGGCATCACAGCTTCAGCAGCTTGGCACTTGGCTTCTCCTTCCACTAAGACACCTGCTCCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | CTCAGGTGGCTTCTAAGAGAGAGCCTGGCCCACAGTTaGGTTGCTGGCCAGCGTCTAAACCTACTTTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRWLLRESLAHS*VAGQRLNLLWS Trigger: TGACCAAAGTAGGTTTAGACGCTGGCCAGCAACCCAACTGTGGGCCAGGCTCTCTCTTAGAAGCCACCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | TGTGTGGCGCCTGGCACTATGTGCTTAGCAGCTTCCTaGTGTCCATCCAGAAAGGCCCTGACCTTGCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CVAPGTMCLAAS*CPSRKALTLLK Trigger: TTTGAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGCTAAGCACATAGTGCCAGGCGCCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | TCCAGAACCCTCTCAGGACTCAGCTGGGTGGAACAGTaGGGTACAGCATTTGGGAGCCTGATGAGAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRTLSGLSWVEQ*GTAFGSLMRKR Trigger: CCTCTTTCTCATCAGGCTCCCAAATGCTGTACCTCACTGTTCCACCCAGCTGAGTCCTGAGAGGGTTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | ATGGCTACTCCTAGCAACGCTGCTAAGGACAGTGGCTaGTGTAGCCAGAAACCATCCTTCCCATCCTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: MATPSNAAKDSG*CSQKPSFPSCD Trigger: GTCACAGGATGGGAAGGATGGTTTCTGGCTACAGCAGCCACTGTCCTTAGCAGCGTTGCTAGGAGTAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | TGGACAGAACAGCGAGAAGGGGCTTGGCTGCAAGGTTaGGCCACTAGCTTCTGTCAAACACAAAAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WTEQREGAWLQG*ATSFCQTQKQH Trigger: GTGCTGCTTTTGTGTTTGACAGAAGCTAGTGGCCCAACCTTGCAGCCAAGCCCCTTCTCGCTGTTCTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCCACTCTGATAAATTCTaGCTTCTTTCTCTAACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: GWGWLAGKANPCPEPLSGHSDKF*LLSLTR Trigger: TCGAGTTAGAGAAAGAAGCAAGAATTTATCAGAGTG...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | CGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATaGATGGAAGTCCACAGAAGCATGGGGCTTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVLPSAHMESVS*MEVHRSMGLPE Trigger: CTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | TGTCTTAGTGGAAGGAGAAGCCAAGTGCCAAGCTGCTaGAGCTGTGATGCCAGGTCTGAAGTCAAGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLSGRRSQVPSC*SCDARSEVKSL Trigger: CAGGCTCTTGACTTCAGACCTGGCATCACAGCTTCAGCAGCTTGGCACTTGGCTTCTCCTTCCACTAAGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | AAGGCACACCCTAAGATGACTGACCTAGAAGCCAGGTaGCTCTGTGAGAGGCATAATAGGGGCAGGTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KAHPKMTDLEAR*LCERHNRGRYG Trigger: CCCATACCTGCCCCTATTATGCCTCTCACAGAGTCACCTGGCTTCTAGGTCAGTCATCTTAGGGTGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | AGAGATGGAGAGCCAACAGCTGTCCTTTGGGAATCCTaGCATCAACAGGGGAGCAGTGGCAAGTCATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RDGEPTAVLWES*HQQGSSGKSWT Trigger: AGTCCATGACTTGCCACTGCTCCCCTGTTGATGTCAGGATTCCCAAAGGACAGCTGTTGGCTCTCCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | AAATTAAATTCTCAAGCCAGCTTGGCGCCACCCTCCTaGTTGCCACGTCCGACCACTCTGTCTGGTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KLNSQASLAPPS*LPRPTTLSGSH Trigger: ATGGGAACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTTGAGAATTTAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR GCA 72 bp | CAAAAGATGTGGGCCATACCAAGGTACCAAGGAAGCTaGCCTCAGCCAAATGCTACAGAAGGCACACCACAC | + |
|
Preference number: 3 (lower is better) Translates to: QKMWAIPRYQGS*PQPNATEGTPH Trigger: GTGTGGTGTGCCTTCTGTAGCATTTGGCTGAGGGCAGCTTCCTTGGTACCTTGGTATGGCCCACATCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTCTGAGCAGTGTCTCATaGTCTTTAAAGAAATCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVLSSVS*SLKKSR Trigger: CCTTGATTTCTTTAAAGACAATGAGACACTGCTCAG...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGCAAGCCTTGTCTATATaGTTCTGCCCAAGCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRQALSI*FCPSSH Trigger: ATGGGAGCTTGGGCAGAACAATATAGACAAGGCTTG...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | GCAACGGTAGGAGAACTGAGAGCCCATCGTCATCCTTaGCTACACAGCAAGCAAGTTCAAAGCCAACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ATVGELRAHRHP*LHSKQVQSQLW Trigger: CCAGAGTTGGCTTTGAACTTGCTTGCTGTGTAGTCAAGGATGACGATGGGCTCTCAGTTCTCCTACCGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | CCTAAGGACAGGCTCTGGGATCTAGCTTCAGACCACTaGTCACACTTAGCACAAGACTTCCAGGGGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKDRLWDLASDH*SHLAQDFQGKR Trigger: TCTCTTCCCCTGGAAGTCTTGTGCTAAGTGTGATCAGTGGTCTGAAGCTAGATCCCAGAGCCTGTCCTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | GGCCCTGACCTTGCTCAAAGAGTCAGGTCACCAAACTaGCAGTACCTCAGGAGTATAGCAAGAGGTCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPDLAQRVRSPN*QYLRSIARGQK Trigger: CTTTTGACCTCTTGCTATACTCCTGAGGTACTGTCAGTTTGGTGACCTGACTCTTTGAGCAAGGTCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | GCTTATGAGCACGGTTTAATGTCTCTGACCAGTGAATaGCTCGGGACACACAGAAAAAGAAGACACCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AYEHGLMSLTSE*LGTHRKRRHRP Trigger: TGGCCGGTGTCTTCTTTTTCTGTGTGTCCCGAGCCATTCACTGGTCAGAGACATTAAACCGTGCTCATAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCAAGCCCATCGTCATCCTaGACTACACAGCAAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: YFRVPIWSQSHEWKSTEASPSSS*TTQQAS Trigger: ACTTGCTTGCTGTGTAGTCAAGGATGACGATGGGCT...TGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | CAAGTGCTCACATTCAAGTTTTCGATAACTGGCCTCTaGCTTTGGGTACAGACAAGGAATGGGCTGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QVLTFKFSITGL*LWVQTRNGLAR Trigger: CCTTGCCAGCCCATTCCTTGTCTGTACCCAAAGTCAGAGGCCAGTTATCGAAAACTTGAATGTGAGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | CATGATCTGAGCTCTGCACTTCCTGGAAGGATCAAGTaGAACAATGGAATCCAAAGAGCAGACACTGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: HDLSSALPGRIK*NNGIQRADTDG Trigger: CCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTCCAGGAAGTGCAGAGCTCAGATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CCA 72 bp | TTCCCAGCAAGTGCTCACATTCAAGTTTTCGATAACTaGCCTCTGACTTTGGGTACAGACAAGGAATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPASAHIQVFDN*PLTLGTDKEWA Trigger: AGCCCATTCCTTGTCTGTACCCAAAGTCAGAGGCCAGTTATCGAAAACTTGAATGTGAGCACTTGCTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | CACACATGTACACAATGCACATCTGAAGCTATGACATaGCCCATGCATGTTCGCAATGCACATCTGAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTCTQCTSEAMT*PMHVRNAHLKL Trigger: GAGCTTCAGATGTGCATTGCGAACATGCATGGGTCATGTCATAGCTTCAGATGTGCATTGTGTACATGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR TCA 72 bp | AGGGCAGTTCTCTCGTTCCTTGATTTCAACATATACTaGCAGCTTTACGATATAGACGTGGGATTTTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: RAVLSFLDFNIY*QLYDIDVGFYY Trigger: ATAATAAAATCCCACGTCTATATCGTAAAGCTGTCAGTATATGTTGAAATCAAGGAACGAGAGAACTGCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CAA 72 bp | TGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTaGTCCAGAGCCCTTGTCGGGCAGGCAGGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WWLGLASRESKP*SRALVGQAGGR Trigger: CCGCCCACCTGCCTGCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCTGTGGGCGCCTGGGCTGTGTGTGGCGCCTGGCACTATGTGCTTAGCAACCCAACAGGAGGCCTaGGTTCTTCACTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLWAPGLCVAPGTMCLATQQEA*VLHCQR Trigger: CCTCTGGCAGTGAAGAACGCAGGCCTCCTGTTGGGT...TGCTAAGCACATAGTGCCAGGCGCCACACACAGCCCAGGCGCCCACAGGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTCCAAACTGACAGTGGGAGGGGTCAGGAGGGCTCTGACTCAGGGCTCCCTTCCCCAGTGGGAGTaGTTCCGGACCCAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSKLTVGGVRRALTQGSLPQWE*FRTQVL Trigger: CAGCACCTGGGTCCGGAACCACTCCCACTGGGGAAG...GGAGCCCTGAGTCAGAGCCCTCCTGACCCCTCCCACTGTCAGTTTGGAGCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTGAGCCGGGGGAGAAGCTaGCAAGGCCTTCAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCLRMWGHYWETHRVRLVSRGRS*QGLQMG Trigger: GCCCATCTGAAGGCCTTGGCAGCTTCTCCCCCGGCT...CACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGACAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| 3UTR CAA 72 bp | TGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTaGTCGGGCAGGCAGGTGGGCGGGCGGGCATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLAGKANPCPEP*SGRQVGGRALE Trigger: TTCTAATGCCCGCCCGCCCACCTGCCTGCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAATGCGCCTTCCCCAGTaGGAGTGGTTCCGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEAVHAHMICLRSLSQLGMRLPQ*EWFRTQ Trigger: CTGGGTCCGGAACCACTCCCACTGGGGAAGGCGCAT...TCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTCCTCTCCATAGTAGGTaGCCACCTCCAGCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGGACSHDLLEVSEPAGSPLHSR*PPPAGA Trigger: CGCCCCTGCTGGAGGTGGTCACCTACTATGGAGAGG...ACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTATGCGCCTTCCCCAGTaGGAGTGGTTCCGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGGACSHDLLEVSEPAGSMRLPQ*EWFRTQ Trigger: CTGGGTCCGGAACCACTCCCACTGGGGAAGGCGCAT...ACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTGTGGGCGCCTGGGCTGTGTGTGGCGCCTGGCACTATGTGCTTAGCACATTGTTGTTGCAGTTaGTGGTGGTCCCATTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLWAPGLCVAPGTMCLAHCCCS*WWSHWL Trigger: CAGCCAATGGGACCACCACCAACTGCAACAACAATG...TGCTAAGCACATAGTGCCAGGCGCCACACACAGCCCAGGCGCCCACAGGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| 3UTR CAA 72 bp | GGGCTTCCAGAGGCGGTGCATGCTCACATGATCTGCTaGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLPEAVHAHMIC*RSLSQLGVAAH Trigger: ATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCTCGGGACACACAGAAAAAGAAGACACCGGCCAGACGGAAGCTGGCGCGGTCACCAGGATACCCATaGAGTGCACGGCCACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: MARDTQKKKTPARRKLARSPGYP*SARPRY Trigger: GTATCGTGGCCGTGCACTGCATGGGTATCCTGGTGA...CCGCGCCAGCTTCCGTCTGGCCGGTGTCTTCTTTTTCTGTGTGTCCCGAGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCATGGTGGTGGTCCCATTaGCTGCCTCTATCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGNGGWGWLAGKANPCPWWWSH*LPLSPA Trigger: AGCAGGTGATAGAGGCAGCCAATGGGACCACCACCA...TGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTGGAGGTGGCTGGGGTCTaGGATCCTCTGGACAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCLRMWGHYWETHRVRLVEVAGV*DPLDNE Trigger: TTCATTGTCCAGAGGATCCCAGACCCCAGCCACCTC...CACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTAGCAGCTTCACCGACTaGTACAACCAGCAGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVSSFTD*YNQQLG Trigger: GCCCAACTGCTGGTTGTACCAGTCGGTGAAGCTGCT...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTCAGCAGAATCCCAGCTaGGTGACGATGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVQQNPS*VTMRKK Trigger: CTTCTTCCTCATCGTCACTCAGCTGGGATTCTGCTG...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | ATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACCCTCTCCATAGTAGGTaGCCACCTCCAGCAGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MICLRSLSQLGVAAHASNPLHSR*PPPAGA Trigger: CGCCCCTGCTGGAGGTGGTCACCTACTATGGAGAGG...GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGCCCCAGCAGTCCGGTaGCAATGTTGCCTTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGACSHDLLEVSEPAGSAPAVR*QCCLSA Trigger: TGCTGAAAGGCAACATTGGCACCGGACTGCTGGGGC...ACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACCTCCATACTGCCTGCGTTCTTCACTaGCAGAGGCAGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSLSQLGVAAHASNLHTACVLH*QRQPQQ Trigger: CTGCTGGGGCTGCCTCTGGCAGTGAAGAACGCAGGC...AGTATGGAGGTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGGAGGTGGCTGGGGTCTaGGATCCTCTGGACAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRGGACSHDLLEVSEPAGEVAGV*DPLDNE Trigger: TTCATTGTCCAGAGGATCCCAGACCCCAGCCACCTC...CCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TACAGACAAGGAATGGGCTGGCAAGGATGGGGCATGTCTGCCTCTGGGGCATCTAGGGTAGGTCTTCCATaGAGCCACCAAGGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRQGMGWQGWGMSASGASRVGLP*SHQGEV Trigger: CACCTCCCCTTGGTGGCTCCATGGAAGACCTACCCT...AGATGCCCCAGAGGCAGACATGCCCCATCCTTGCCAGCCCATTCCTTGTCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCGGTCCAGGCGTGGGATaGGGATGGCCAGCACACATG | + |
|
Preference number: 4 (lower is better) Translates to: VPIWSQSHEWKSTEAWGFGPGVG*GWPAHM Trigger: CATGTGTGCTGGCCATCCTCATCCCACGCCTGGACC...GAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTAGGATACCCATGCAGTaGACGGCCACGATACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TLSEDVGTLLGDTQGEAGRIPMQ*TATIPI Trigger: GATTGGTATCGTGGCCGTGCACTGCATGGGTATCCT...ACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGACAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTTATATTAGCTCCAAATTaGAGGTACCCCAGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPAWRHPPDCHVRPLCLVILAPN*RYPRLP Trigger: GGGGAGCCTGGGGTACCTGCAATTTGGAGCTAATAT...AACCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAAGGTGGATCAGGGTCTaGAACCATGTCATGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNGGWGWLAGKANPCPRWIRV*NHVMLL Trigger: CAGTAGCATGACATGGTTCCAGACCCTGATCCACCT...TGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGTAGAGGAGTCGCTATaGCTTGGCTGGATCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAVHAHMICLRSLSQLGVVEESL*LGWISS Trigger: TGAGCTGATCCAGCCAAGCCATAGCGACTCCTCTAC...CACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | AGCAAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACAATCACCAGCAGGCTaGGAGGACCCAACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKFKANSGDMRPCLRMWGQSPAG*EDPTGG Trigger: GCCTCCTGTTGGGTCCTCTCAGCCTGCTGGTGATTG...TCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAATCACCAGCAGGCTaGGAGGACCCAACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPIWSQSHEWKSTEAWGFQSPAG*EDPTGG Trigger: GCCTCCTGTTGGGTCCTCTCAGCCTGCTGGTGATTG...GAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAACTGGAGGGCATAGGTaGAGAAGATGCCTATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEAVHAHMICLRSLSQLGTGGHR*RRCLWS Trigger: ACTCCATAGGCATCTTCTTCACCTATGCCCTCCAGT...TCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | ACGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGGGTCCAGGCGTGGGATaGGGATGGCCAGCACACATG | + |
|
Preference number: 4 (lower is better) Translates to: TSTSECPYGVSLMNGSPQGPGVG*GWPAHM Trigger: CATGTGTGCTGGCCATCCTCATCCCACGCCTGGACC...CTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAGCCGGGGGAGAAGCTaGCAAGGCCTTCAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSECPYGVSLMNGSPQSRGRS*QGLQMG Trigger: GCCCATCTGAAGGCCTTGGCAGCTTCTCCCCCGGCT...CTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTCGGGGCTCACGTCTGTaGAACTGTAGTCATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSEDVGTLLGDTQGEAGRGSRL*NCSHDS Trigger: ACTATCATGACTACAGTTCCACAGACGTGAGCCCCG...ACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGACAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| 3UTR CAA 72 bp | GGCAGGTATGGGCCACAGTTAGTGTTTAGTGGTTCCTaGGAAGCCCAGGATACAGAGGCAGCTTGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRYGPQLVFSGS*EAQDTEAAWGK Trigger: CTTGCCCCAAGCTGCCTCTGTATCCTGGGCTTCCAAGGAACCACTAAACACTAACTGTGGCCCATACCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCGCCCCAGCAGTCCGGTaGCAATGTTGCCTTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGAPAVR*QCCLSA Trigger: TGCTGAAAGGCAACATTGGCACCGGACTGCTGGGGC...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | ACTATACCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTAGGATACCCATGCAGTaGACGGCCACGATACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TIPEDVGTLLGDTQGEAGRIPMQ*TATIPI Trigger: GATTGGTATCGTGGCCGTGCACTGCATGGGTATCCT...ACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGGTATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGGGAATGGTGGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAAAGCAAAAATCGCTGTaGCAAAGAACAGAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNGGWGWLAGKANPCPKQKSL*QRTEGR Trigger: CCTACCCTCTGTTCTTTGGCACAGCGATTTTTGCTT...TGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCCACCATTCCCACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGGCTGGCTAGCAGGGAAAGCAAACCCTTGTCCAGAGCCCTTGTCGGGCGTAGAACCACTCCAATaGCTTCAAAAGCAAAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: GWGWLAGKANPCPEPLSGVEPLQ*LQKQKS Trigger: CGATTTTTGCTTTTGAAGGCATTGGAGTGGTTCTAC...GCCCGACAAGGGCTCTGGACAAGGGTTTGCTTTCCCTGCTAGCCAGCCCCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACAGACCATGGCGGTaGGCACACAAAGGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SKFKANSGDMRPCLRMWGHRPWR*AHKGPP Trigger: TGGTGGACCTTTGTGTGCGCACCGCCATGGTCTGTG...TCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR GCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCCACAGACCATGGCGGTaGGCACACAAAGGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGHRPWR*AHKGPP Trigger: TGGTGGACCTTTGTGTGCGCACCGCCATGGTCTGTG...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCTCCGGACCCAGGTGCTaGGGCTGCATTCTAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGSGPRC*GCILVH Trigger: ATGGACTAGAATGCAGCCCCAGCACCTGGGTCCGGA...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCACTTCCCCAGTGGGAGTaGTTCCGGACCCAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFRVPIWSQSHEWKSTEALPQWE*FRTQVL Trigger: CAGCACCTGGGTCCGGAACCACTCCCACTGGGGAAG...TGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR CAA 72 bp | GCAGCTTCCTGGTGTCCATCCAGAAAGGCCCTGACCTaGCTCAAAGAGTCAGGTCACCAAACTGACAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: AASWCPSRKALT*LKESGHQTDST Trigger: GGTACTGTCAGTTTGGTGACCTGACTCTTTGAGCAAGGTCAGGGCCTTTCTGGATGGACACCAGGAAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCTCACCAGGATACCCATaGAGTGCACGGCCACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGSPGYP*SARPRY Trigger: GTATCGTGGCCGTGCACTGCATGGGTATCCTGGTGA...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACAGCAGCTTCACCGACTaGTACAACCAGCAGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFKANSGDMRPCLRMWGHSSFTD*YNQQLG Trigger: GCCCAACTGCTGGTTGTACCAGTCGGTGAAGCTGCT...GTGTCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| 3UTR CAA 72 bp | CACATAACCCAGAGATGGAGAGCCAACAGCTGTCCTTaGGGAATCCTGACATCAACAGGGGAGCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HITQRWRANSCP*GILTSTGEQWQ Trigger: TTGCCACTGCTCCCCTGTTGATGTCAGGATTCCCAAAGGACAGCTGTTGGCTCTCCATCTCTGGGTTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCCAGCAGAATCCCAGCTaGGTGACGATGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGQQNPS*VTMRKK Trigger: CTTCTTCCTCATCGTCACTCAGCTGGGATTCTGCTG...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | ATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACACTGGAGGGCATAGGTaGAGAAGATGCCTATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MICLRSLSQLGVAAHASNTGGHR*RRCLWS Trigger: ACTCCATAGGCATCTTCTTCACCTATGCCCTCCAGT...GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCAACCCAACAGGAGGCCTaGGTTCTTCACTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YFRVPIWSQSHEWKSTEATQQEA*VLHCQR Trigger: CCTCTGGCAGTGAAGAACGCAGGCCTCCTGTTGGGT...TGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACCTCCATACTGGTGGTCCCATTGGCTaGCTCTATCACCTGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSLSQLGVAAHASNLHTGGPIG*LYHLLK Trigger: TTTAAGCAGGTGATAGAGGCAGCCAATGGGACCACC...AGTATGGAGGTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACCTCCATACTATATTAGCTCCAAATTaGAGGTACCCCAGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSLSQLGVAAHASNLHTILAPN*RYPRLP Trigger: GGGGAGCCTGGGGTACCTGCAATTTGGAGCTAATAT...AGTATGGAGGTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGGGGTCTGGGATCCTCTaGACAATGAACTGGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRGSGIL*TMNWYI Trigger: GATATACCAGTTCATTGTCCAGAGGATCCCAGACCC...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCAAGGGTAGGTCTTCCATaGAGCCACCAAGGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFRVPIWSQSHEWKSTEARVGLP*SHQGEV Trigger: CACCTCCCCTTGGTGGCTCCATGGAAGACCTACCCT...TGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATTGGTGGTGGTCCCATTaGCTGCCTCTATCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSECPYGVSLMNGSPQKHWWWSH*LPLSPA Trigger: AGCAGGTGATAGAGGCAGCCAATGGGACCACCACCA...ATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCCATTGTTGTTGCAGTTaGTGGTGGTCCCATTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGHCCCS*WWSHWL Trigger: CAGCCAATGGGACCACCACCAACTGCAACAACAATG...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACGGGTCTGGGATCCTCTaGACAATGAACTGGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: MICLRSLSQLGVAAHASNGSGIL*TMNWYI Trigger: GATATACCAGTTCATTGTCCAGAGGATCCCAGACCC...GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGGTAGAGGAGTCGCTATaGCTTGGCTGGATCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTSECPYGVSLMNGSPQVEESL*LGWISS Trigger: TGAGCTGATCCAGCCAAGCCATAGCGACTCCTCTAC...CTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| 3UTR CAA 72 bp | CCACAGTTGGGTTGCTGGCCAGCGTCTAAACCTACTTaGGTCACTTTCCAGCCTGAGACTTCAGAAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLGCWPASKPT*VTFQPETSESK Trigger: CTTGCTTTCTGAAGTCTCAGGCTGGAAAGTGACCAAAGTAGGTTTAGACGCTGGCCAGCAACCCAACTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGTACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAGGTGGATCAGGGTCTaGAACCATGTCATGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSTSECPYGVSLMNGSPQRWIRV*NHVMLL Trigger: CAGTAGCATGACATGGTTCCAGACCCTGATCCACCT...CTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTACTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATTGTTGCAGTTGGTGGTaGTCCCATTGGCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSECPYGVSLMNGSPQKHCCSWW*SHWLPL Trigger: TAGAGGCAGCCAATGGGACCACCACCAACTGCAACA...ATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | TACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCAGGTGGTCCCATTGGCTaGCTCTATCACCTGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFRVPIWSQSHEWKSTEAGGPIG*LYHLLK Trigger: TTTAAGCAGGTGATAGAGGCAGCCAATGGGACCACC...TGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACAAGCAAAAATCGCTGTaGCAAAGAACAGAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFKANSGDMRPCLRMWGHKQKSL*QRTEGR Trigger: CCTACCCTCTGTTCTTTGGCACAGCGATTTTTGCTT...GTGTCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR CCA 90 bp | GAAGGATCAAGTGAAACAATGGAATCCAAAGAGCAGACACTGACGGGAGGGAGACGGGGCTCACGTCTGTaGAACTGTAGTCATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSETMESKEQTLTGGRRGSRL*NCSHDS Trigger: ACTATCATGACTACAGTTCCACAGACGTGAGCCCCG...TCTCCCTCCCGTCAGTGTCTGCTCTTTGGATTCCATTGTTTCACTTGATCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACGTAGAACCACTCCAATaGCTTCAAAAGCAAAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: KFKANSGDMRPCLRMWGHVEPLQ*LQKQKS Trigger: CGATTTTTGCTTTTGAAGGCATTGGAGTGGTTCTAC...GTGTCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| 3UTR CAA 72 bp | TACACCGTAAATACCTCCAGCCTGAGCAGTGTCTCATaGTCTTTAAAGAAATCAAGGGGCAGCACTGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: YTVNTSSLSSVS*SLKKSRGSTVT Trigger: GGTCACAGTGCTGCCCCTTGATTTCTTTAAAGACAATGAGACACTGCTCAGGCTGGAGGTATTTACGGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR TCA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCCAATGGAAATTTCTGTaGGTCCTTCATTTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGVSLMNGSPQKHGASRGQWKFL*VLHFVL Trigger: GAGAACAAAATGAAGGACTCACAGAAATTTCCATTG...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTCTGTCAAACACAAAAGCAGCACTCTGATAAATTCTTGCTTCTTTCTCTGTTGCAGTTGGTGGTaGTCCCATTGGCTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LASVKHKSSTLINSCFFLCCSWW*SHWLPL Trigger: TAGAGGCAGCCAATGGGACCACCACCAACTGCAACA...GAGAAAGAAGCAAGAATTTATCAGAGTGCTGCTTTTGTGTTTGACAGAAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS GCA 90 bp | TGCTACTGTTCTCTCCTAAGCGTTGGTAGGAGCCGGGGGAGAAGCTaGCAAGGCCTTCAGATGGGCTCTCCTCGGGGCTCACGTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CYCSLLSVGRSRGRS*QGLQMGSPRGSRLW Trigger: CCACAGACGTGAGCCCCGAGGAGAGCCCATCTGAAGGCCTTGGCAGCTTCTCCCCCGGCTCCTACCAACGCTTAGGAGAGAACAGTAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGATTGGTGGTGGTCCCATaGGCTGCCTCTATCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PEAVHAHMICLRSLSQLGLVVVP*AASITC Trigger: GCAGGTGATAGAGGCAGCCAATGGGACCACCACCAA...TCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS CCA 90 bp | AGCTGCCAAGGCCTTCAGATGGGCTCTCCTCGGGGCTCACGTCTGTaGAACTGTAGTCATGATAGTCTTCGTTCCGAAGCCTCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCQGLQMGSPRGSRL*NCSHDSLRSEASVW Trigger: CCACACAGAGGCTTCGGAACGAAGACTATCATGACTACAGTTCCACAGACGTGAGCCCCGAGGAGAGCCCATCTGAAGGCCTTGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGATATTAGCTCCAAATaGCAGGTACCCCAGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAVHAHMICLRSLSQLGVDISSK*QVPQAP Trigger: GGGAGCCTGGGGTACCTGCAATTTGGAGCTAATATC...CACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCAGCTTGGCGCCACCCTCCTGATTGCCACGTCCGACCACTCTGTCTGGTGTGAGTCCTTCATTTaGTTCTCAAGGGGTAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SSQLGATLLIATSDHSVWCESFI*FSRGRT Trigger: GGTTCTACCCCTTGAGAACAAAATGAAGGACTCACA...CCAGACAGAGTGGTCGGACGTGGCAATCAGGAGGGTGGCGCCAAGCTGGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCGGTGCATGCTCACATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGATCACCTGCTTAAAGTaGTCCGCCAGAAACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAVHAHMICLRSLSQLGVITCLK*SARNTK Trigger: CTTCGTGTTTCTGGCGGACAACTTTAAGCAGGTGAT...CACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCATGTGAGCATGCACCGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGACGGTCACATTGTTGTaGCAGTTGGTGGTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRTVTLL*QLVVVP Trigger: TGGGACCACCACCAACTGCAACAACAATGTGACCGT...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGACACTGACGGGAGGGAGAAATCTGAGGATGAGACAGCCTAAGGACAGGAAGGCACTGGTGGAATaGGTAGAGGAGTCGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: EQTLTGGRNLRMRQPKDRKALVE*VEESLW Trigger: CCATAGCGACTCCTCTACCAATTCCACCAGTGCCTT...CCTGTCCTTAGGCTGTCTCATCCTCAGATTTCTCCCTCCCGTCAGTGTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | ACTATACCTGAGGATGTGGGGACACTACTGGGAGACACACAGGGTGAGGCTGGTATCACCTGCTTAAAGTaGTCCGCCAGAAACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TIPEDVGTLLGDTQGEAGITCLK*SARNTK Trigger: CTTCGTGTTTCTGGCGGACAACTTTAAGCAGGTGAT...ACCAGCCTCACCCTGTGTGTCTCCCAGTAGTGTCCCCACATCCTCAGGTATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | ACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATTTGGTGGTGGTCCCATaGGCTGCCTCTATCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSECPYGVSLMNGSPQKHLVVVP*AASITC Trigger: GCAGGTGATAGAGGCAGCCAATGGGACCACCACCAA...ATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | ATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACATCACGGTCACATTGTaGTTGCAGTTGGTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MICLRSLSQLGVAAHASNITVTL*LQLVVV Trigger: GACCACCACCAACTGCAACAACAATGTGACCGTGAT...GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGACACGATATTAGCTCCAAATaGCAGGTACCCCAGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KFKANSGDMRPCLRMWGHDISSK*QVPQAP Trigger: GGGAGCCTGGGGTACCTGCAATTTGGAGCTAATATC...GTGTCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR CAA 90 bp | AGCAAGTTCAAAGCCAACTCTGGTGACATGAGACCCTGTCTGAGGATGTGGGGAAAGGCACTGGTGGAATaGGTAGAGGAGTCGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: SKFKANSGDMRPCLRMWGKALVE*VEESLW Trigger: CCATAGCGACTCCTCTACCAATTCCACCAGTGCCTT...TCCCCACATCCTCAGACAGGGTCTCATGTCACCAGAGTTGGCTTTGAACTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020499.14 |
||
| CDS-3UTR CAA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCACATTGTTGTTGCAGTaGGTGGTGGTCCCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YGVSLMNGSPQKHGASRGTLLLQ*VVVPLA Trigger: AGCCAATGGGACCACCACCAACTGCAACAACAATGT...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS-3UTR CAA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCATCACGGTCACATTGTaGTTGCAGTTGGTGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: YGVSLMNGSPQKHGASRGITVTL*LQLVVV Trigger: GACCACCACCAACTGCAACAACAATGTGACCGTGAT...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS-3UTR CAA 90 bp | ATGATCTGCTTGAGGTCTCTGAGCCAGCTGGGAGTGGCAGCTCATGCTAGTAACAGGGTGATGCTGCCCTaGATATTAGCTCCAAATTGC | + |
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Preference number: 5 (lower is better) Translates to: MICLRSLSQLGVAAHASNRVMLP*ILAPNC Trigger: GCAATTTGGAGCTAATATCAAGGGCAGCATCACCCT...GTTACTAGCATGAGCTGCCACTCCCAGCTGGCTCAGAGACCTCAAGCAGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS-3UTR CAA 90 bp | ACTTCCGAGTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATACGGTCACATTGTTGTaGCAGTTGGTGGTGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TSECPYGVSLMNGSPQKHTVTLL*QLVVVP Trigger: TGGGACCACCACCAACTGCAACAACAATGTGACCGT...ATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCACTCGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS-3UTR CAA 90 bp | TATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCCAGAGGCAGGGTGATGCTGCCCTaGATATTAGCTCCAAATTGC | + |
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Preference number: 5 (lower is better) Translates to: YGVSLMNGSPQKHGASRGRVMLP*ILAPNC Trigger: GCAATTTGGAGCTAATATCAAGGGCAGCATCACCCT...GCCTCTGGAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS-3UTR CAA 90 bp | GTGCCCATATGGAGTCAGTCTCATGAATGGAAGTCCACAGAAGCATGGGGCTTCTGTGAGTCCTTCATTTaGTTCTCAAGGGGTAGAACC | + |
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Preference number: 5 (lower is better) Translates to: VPIWSQSHEWKSTEAWGFCESFI*FSRGRT Trigger: GGTTCTACCCCTTGAGAACAAAATGAAGGACTCACA...GAAGCCCCATGCTTCTGTGGACTTCCATTCATGAGACTGACTCCATATGGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020499.14 ENSMUST00000108872.9 |
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| CDS CCA 72 bp | GTAGGAGCCGGGGGAGAAGCTGCCAAGGCCTTCAGATaGGCTCTCCTCGGGGCTCACGTCTGTGGAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: VGAGGEAAKAFR*ALLGAHVCGTV Trigger: TACAGTTCCACAGACGTGAGCCCCGAGGAGAGCCCATCTGAAGGCCTTGGCAGCTTCTCCCCCGGCTCCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
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| CDS TCA 72 bp | TGCAGTGCACGGCCACGATACCAATCACCAGCAGGCTaGGAGGACCCAACAGGAGGCCTGCGTTCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: CSARPRYQSPAG*EDPTGGLRSSL Trigger: CAGTGAAGAACGCAGGCCTCCTGTTGGGTCCTCTCAGCCTGCTGGTGATTGGTATCGTGGCCGTGCACTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
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| CDS GCA 72 bp | GCGGTGCGCACACAAAGGTCCACCATCAGCTCGAAATaGTCAGGCACTCGGGACACAATGGCCGGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: AVRTQRSTISSK*SGTRDTMAGMM Trigger: CATCATCCCGGCCATTGTGTCCCGAGTGCCTGAGCATTTCGAGCTGATGGTGGACCTTTGTGTGCGCACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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| CDS CAA 72 bp | ACTGCCAGAGGCAGCCCCAGCAGTCCGGTGCCAATGTaGCCTTTCAGCAGGTGGATCAGGGTCTGGAACCAT | + |
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Preference number: 6 (lower is better) Translates to: TARGSPSSPVPM*PFSRWIRVWNH Trigger: ATGGTTCCAGACCCTGATCCACCTGCTGAAAGGCAACATTGGCACCGGACTGCTGGGGCTGCCTCTGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
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| CDS CCA 72 bp | GGCCTTCAGATGGGCTCTCCTCGGGGCTCACGTCTGTaGAACTGTAGTCATGATAGTCTTCGTTCCGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLQMGSPRGSRL*NCSHDSLRSEA Trigger: GGCTTCGGAACGAAGACTATCATGACTACAGTTCCACAGACGTGAGCCCCGAGGAGAGCCCATCTGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
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| CDS CCA 72 bp | TGGGCGTCGGGATCACGGTCACATTGTTGTTGCAGTTaGTGGTGGTCCCATTGGCTGCCTCTATCACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: WASGSRSHCCCS*WWSHWLPLSPA Trigger: AGCAGGTGATAGAGGCAGCCAATGGGACCACCACCAACTGCAACAACAATGTGACCGTGATCCCGACGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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| CDS CCA 72 bp | GGCACTGGTGGAATTGGTAGAGGAGTCGCTATGGCTTaGCTGGATCAGCTCACACAGAGACTCGTAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GTGGIGRGVAMA*LDQLTQRLVGP Trigger: GGGACCTACGAGTCTCTGTGTGAGCTGATCCAGCCAAGCCATAGCGACTCCTCTACCAATTCCACCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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| CDS GCA 72 bp | CTTTCAGCAGGTGGATCAGGGTCTGGAACCATGTCATaGTACTGTTCTCTCCTAAGCGTTGGTAGGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSAGGSGSGTMS*YCSLLSVGRSR Trigger: CCGGCTCCTACCAACGCTTAGGAGAGAACAGTAGCATGACATGGTTCCAGACCCTGATCCACCTGCTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 ENSMUST00000147506.8 |
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| CDS CAA 72 bp | ACGGTCACATTGTTGTTGCAGTTGGTGGTGGTCCCATaGGCTGCCTCTATCACCTGCTTAAAGTTGTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: TVTLLLQLVVVP*AASITCLKLSA Trigger: GGCGGACAACTTTAAGCAGGTGATAGAGGCAGCCAATGGGACCACCACCAACTGCAACAACAATGTGACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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| CDS GCA 72 bp | CACATTGTTGTTGCAGTTGGTGGTGGTCCCATTGGCTaGCTCTATCACCTGCTTAAAGTTGTCCGCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HIVVAVGGGPIG*LYHLLKVVRQK Trigger: TTTCTGGCGGACAACTTTAAGCAGGTGATAGAGGCAGCCAATGGGACCACCACCAACTGCAACAACAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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| CDS CAA 72 bp | TACAGAATCAATGGAAATTTCTGTGAGTCCTTCATTTaGTTCTCAAGGGGTAGAACCACTCCAATGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: YRINGNFCESFI*FSRGRTTPMPS Trigger: TGAAGGCATTGGAGTGGTTCTACCCCTTGAGAACAAAATGAAGGACTCACAGAAATTTCCATTGATTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020499.14 ENSMUST00000108867.2 ENSMUST00000108872.9 |
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