Pregenerated sensors for SLC35G1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044026Ensembl transcript IDs: ENSMUST00000054098.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATAGCCCCTCAAGTCTGCAGCTAATGATAACAGTAGACAGTGTCTaGCAAAGTAAGAGGTGGCAGCCACAATGGCCTCACCATAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: NSPSSLQLMITVDSV*QSKRWQPQWPHHKG Trigger: GCCTTTATGGTGAGGCCATTGTGGCTGCCACCTCTTACTTTGTCAGACACTGTCTACTGTTATCATTAGCTGCAGACTTGAGGGGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 90 bp | TCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGTACTCCAGGAGTaGAACTCAGTAAGAGGAGGCTGCTATGGAAACCAGCTATTGCAG | + |
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Preference number: 1 (lower is better) Translates to: SQTLFYCVSLVVLQE*NSVRGGCYGNQLLQ Trigger: CTGCAATAGCTGGTTTCCATAGCAGCCTCCTCTTACTGAGTTCCACTCCTGGAGTACCACCAAACTTACACAATAGAAGAGTGTCTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 90 bp | GCCAGAGTTGTTAATATTCTGAAAGAGAGAACTGCTAACCACATGTaGCAAGCTGAAGGCTCTGTTCAGAGTACATATAAAAAGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: ARVVNILKERTANHM*QAEGSVQSTYKKSQ Trigger: CTGGGACTTTTTATATGTACTCTGAACAGAGCCTTCAGCTTGCCACATGTGGTTAGCAGTTCTCTCTTTCAGAATATTAACAACTCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR GCA 90 bp | GATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATaGAAAAGACTGGGAAAACCAATCAACTATGGAGTAACAAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: DCVSKTGLYLCSFRI*KRLGKPINYGVTSL Trigger: AAGACTTGTTACTCCATAGTTGATTGGTTTTCCCAGTCTTTTGCATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR TCA 90 bp | CAATGTCAGCCACATATCCTGACATCCATGTACTTAAGACACAGTTaGAATATAATGTATTTCCAAAGGGGTTATCTTCCACTATCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QCQPHILTSMYLRHS*NIMYFQRGYLPLSQ Trigger: CTGGGATAGTGGAAGATAACCCCTTTGGAAATACATTATATTTCAACTGTGTCTTAAGTACATGGATGTCAGGATATGTGGCTGACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 90 bp | ACTGTACGTTTATTAACAGACATGTACTGTAAAGGTATAAATATTTaGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: TVRLLTDMYCKGINI*FNAKGACGMNLLEL Trigger: CAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAATATTTATACCTTTACAGTACATGTCTGTTAATAAACGTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 90 bp | TGTATACCACTTGAACATTGTTTAAAAATCATACCCTGTAAAGGTTaGTATAAGAAACATTGTCTCCAATGTCAGCCACATATCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: CIPLEHCLKIIPCKG*YKKHCLQCQPHILT Trigger: TGTCAGGATATGTGGCTGACATTGGAGACAATGTTTCTTATACCAACCTTTACAGGGTATGATTTTTAAACAATGTTCAAGTGGTATACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR TCA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGACCACATGTGGCAAGCTaGAGGCTCTGTTCAGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: GMYTLITPRFCSHDFKVGPHVAS*RLCSEY Trigger: GTACTCTGAACAGAGCCTTCAGCTTGCCACATGTGG...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTCTGAAATTCCTCAAATaGGCTCCCTTCTCATCAATG | + |
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Preference number: 2 (lower is better) Translates to: IWFNAKGACGMNLLELWVLKFLK*APFSSM Trigger: CATTGATGAGAAGGGAGCTCATTTGAGGAATTTCAG...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CCA 90 bp | ACACTAGGATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGCTCCAGGTATGTGTGTaGGTGTGCAAGATGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TLGLCVKDWLVPVFFPYMLQVCV*VCKMSE Trigger: CTCAGACATCTTGCACACCCACACACATACCTGGAG...CATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAATCCTAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 90 bp | GTATTTCCAAAGGGGTTATCTTCCACTATCCCAGACACTCTTCTATaGTGTAAGTTTGGTGGTACTCCAGGAGTGGAACTCAGTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VFPKGLSSTIPDTLL*CKFGGTPGVELSKR Trigger: CCTCTTACTGAGTTCCACTCCTGGAGTACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCTTTGGAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR GCA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGAGTATGTGTGTGGGTGTaGAAGATGTCTGAGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: GMYTLITPRFCSHDFKVGVCVWV*KMSELG Trigger: ACCTAGCTCAGACATCTTGCACACCCACACACATAC...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTACTGCTAACCACATGTaGCAAGCTGAAGGCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PKGLSSTIPDTLLLCKFGTANHM*QAEGSV Trigger: AACAGAGCCTTCAGCTTGCCACATGTGGTTAGCAGT...ACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTATTAAAGAAAGCCAATaGGTGATGAAGATTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: IWFNAKGACGMNLLELWVIKESQ*VMKILQ Trigger: CTGGAGAATCTTCATCACTCATTGGCTTTCTTTAAT...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGTCAGGTGGCTAAGGTaGTTTAAAACCACCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: PKGLSSTIPDTLLLCKFGVRWLR*FKTTKL Trigger: GAGTTTGGTGGTTTTAAATCACCTTAGCCACCTGAC...ACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTATCACGCCAAGATTTTaGTCTCATGATTTCAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: IWFNAKGACGMNLLELWVITPRF*SHDFKV Trigger: AACCTTGAAATCATGAGAGCAAAATCTTGGCGTGAT...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 90 bp | CCAATGTCAGCCACATATCCTGACATCCATGTACTTAAGACACAGTaGAAATATAATGTATTTCCAAAGGGGTTATCTTCCACTATCCCA | + |
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Preference number: 2 (lower is better) Translates to: PMSATYPDIHVLKTQ*KYNVFPKGLSSTIP Trigger: TGGGATAGTGGAAGATAACCCCTTTGGAAATACATTATATTTCAACTGTGTCTTAAGTACATGGATGTCAGGATATGTGGCTGACATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGCAAAAGACACGAAAAGGCACACATaGGTTAAAAGTGTAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: IVCQRLACTCVLSVYAKDTKRHT*VKSVVI Trigger: GATTACTACACTTTTAACTCATGTGTGCCTTTTCGT...GTCTTTTGCATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR GCA 72 bp | AGCTATTGCAGCCCTCCCTCCCGTCATCCCTCAGGATaGCCTCTAAGACCCCTCCAGAGTACTAAGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SYCSPPSRHPSG*PLRPLQSTKSL Trigger: CAGACTCTTAGTACTCTGGAGGGGTCTTAGAGGGCATCCTGAGGGATGACGGGAGGGAGGGCTGCAATAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR GCA 72 bp | GTGGTACTCCAGGAGTGGAACTCAGTAAGAGGAGGCTaGTATGGAAACCAGCTATTGCAGCCCTCCCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: VVLQEWNSVRGG*YGNQLLQPSLP Trigger: CGGGAGGGAGGGCTGCAATAGCTGGTTTCCATAGCAGCCTCCTCTTACTGAGTTCCACTCCTGGAGTACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 72 bp | ACTCCAGGAGTGGAACTCAGTAAGAGGAGGCTGCTATaGAAACCAGCTATTGCAGCCCTCCCTCCCGTCATC | + |
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Preference number: 3 (lower is better) Translates to: TPGVELSKRRLL*KPAIAALPPVI Trigger: GATGACGGGAGGGAGGGCTGCAATAGCTGGTTTCCATAGCAGCCTCCTCTTACTGAGTTCCACTCCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 72 bp | TCTGTGTTTTCTAGGATGTTGGTAGAACGGCACCATTaGCAGATCTATGCGGGGTCAAATGCAACTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: SVFSRMLVERHH*QIYAGSNATEV Trigger: CACCTCAGTTGCATTTGACCCCGCATAGATCTGCCAATGGTGCCGTTCTACCAACATCCTAGAAAACACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGTATATGGAAACCAGCTATaGCAGCCCTCCCTCCCGTCA | + |
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Preference number: 3 (lower is better) Translates to: RGYLPLSQTLFYCVSLVVYGNQL*QPSLPS Trigger: TGACGGGAGGGAGGGCTGCAATAGCTGGTTTCCATA...TACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CAA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTTCATCTCTAAGATCCTaGAGAATAAGGCTGGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: IWFNAKGACGMNLLELWVSSLRS*RIRLVR Trigger: GCGAACCAGCCTTATTCTCAAGGATCTTAGAGATGA...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR TCA 72 bp | TCAAGTCTGCAGCTAATGATAACAGTAGACAGTGTCTaGCAAAGTAAGAGGTGGCAGCCACAATGGCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SSLQLMITVDSV*QSKRWQPQWPH Trigger: GTGAGGCCATTGTGGCTGCCACCTCTTACTTTGTCAGACACTGTCTACTGTTATCATTAGCTGCAGACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CAA 90 bp | ATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGCAAAAGACCTTCTCTGTGTAGCCTaGGCTGTCCTGGAACTCACT | + |
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Preference number: 3 (lower is better) Translates to: IVCQRLACTCVLSVYAKDLLCVA*AVLELT Trigger: AGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAG...GTCTTTTGCATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR TCA 72 bp | GCACCATTGGCAGATCTATGCGGGGTCAAATGCAACTaGGGTGATTCAGCTAAGTACATATGTAGGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: APLADLCGVKCN*GDSAKYICRMS Trigger: TGACATCCTACATATGTACTTAGCTGAATCACCTCAGTTGCATTTGACCCCGCATAGATCTGCCAATGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGTAGCAGCATTGTCAACGTaGAGCTTCTTATGTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: RGYLPLSQTLFYCVSLVVAALST*SFLCAL Trigger: CAGTGCACATAAGAAGCTCAACGTTGACAATGCTGC...TACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR GCA 72 bp | AGGATGGGAATGTACACACTGATCACGCCAAGATTTTaGTCTCATGATTTCAAGGTTGGAAATCTCGGAATG | + |
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Preference number: 3 (lower is better) Translates to: RMGMYTLITPRF*SHDFKVGNLGM Trigger: CATTCCGAGATTTCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCCCATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR GCA 72 bp | AAAGGTATAAATATTTGGTTTAATGCGAAGGGAGCCTaGGGGATGAACCTTCTAGAACTGTGGGTTTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KGINIWFNAKGA*GMNLLELWVLK Trigger: TTTCAAAACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAATATTTATACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 72 bp | GTTAATATTCTGAAAGAGAGAACTGCTAACCACATGTaGCAAGCTGAAGGCTCTGTTCAGAGTACATATAAA | + |
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Preference number: 3 (lower is better) Translates to: VNILKERTANHM*QAEGSVQSTYK Trigger: TTTATATGTACTCTGAACAGAGCCTTCAGCTTGCCACATGTGGTTAGCAGTTCTCTCTTTCAGAATATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CCA 72 bp | TTATTAACAGACATGTACTGTAAAGGTATAAATATTTaGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: LLTDMYCKGINI*FNAKGACGMNL Trigger: AAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAATATTTATACCTTTACAGTACATGTCTGTTAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR TCA 72 bp | CCACATATCCTGACATCCATGTACTTAAGACACAGTTaGAATATAATGTATTTCCAAAGGGGTTATCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PHILTSMYLRHS*NIMYFQRGYLP Trigger: TGGAAGATAACCCCTTTGGAAATACATTATATTTCAACTGTGTCTTAAGTACATGGATGTCAGGATATGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 72 bp | AACTCAGTAAGAGGAGGCTGCTATGGAAACCAGCTATaGCAGCCCTCCCTCCCGTCATCCCTCAGGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: NSVRGGCYGNQL*QPSLPSSLRMP Trigger: GGGCATCCTGAGGGATGACGGGAGGGAGGGCTGCAATAGCTGGTTTCCATAGCAGCCTCCTCTTACTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | AGCCAAAGCAAAGATAAAAGCTATCCAGACTGTGAGGCTAGCCTAGCTAGCTACTTGCTCCAGTGGTGCTaGCCACCACACAGAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQSKDKSYPDCEASLASYLLQWC*PPHRGP Trigger: GGGCCCTCTGTGTGGTGGTCAGCACCACTGGAGCAA...GTAGCTAGCTAGGCTAGCCTCACAGTCTGGATAGCTTTTATCTTTGCTTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAAGCAAAGATAAAAGCTATCCAGACTGTGAGGCTAGCCTAGCTAGCTACAGGGTGCTTTCTTCTTaGCTTCGGGCTCCCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: SQSKDKSYPDCEASLASYRVLSS*LRAPHA Trigger: CGCGTGGGGAGCCCGAAGCCAAGAAGAAAGCACCCT...GTAGCTAGCTAGGCTAGCCTCACAGTCTGGATAGCTTTTATCTTTGCTTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCAAAGATAAAAGCTATCCAGACTGTGAGGCTAGCCTAGCTAGCTACAAGTCCGGGGCAGGGTaGTTTCTTCTTGGCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SQSKDKSYPDCEASLASYKSGAG*FLLGFG Trigger: CCCGAAGCCAAGAAGAAAGCACCCTGCCCCGGACTT...GTAGCTAGCTAGGCTAGCCTCACAGTCTGGATAGCTTTTATCTTTGCTTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTCGATTGCAAACAAGGTaGAGAAAGCATCCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IWFNAKGACGMNLLELWVRLQTR*RKHPRG Trigger: GCCTCTGGGATGCTTTCTTCACCTTGTTTGCAATCG...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGACGCATCGAAACGCACTaGTCTCTACAGCATGGACGC | + |
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Preference number: 4 (lower is better) Translates to: GMYTLITPRFCSHDFKVGRIETH*SLQHGR Trigger: GCGTCCATGCTGTAGAGATCAGTGCGTTTCGATGCG...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | ACACTAGGATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGAACCAAAGACCCCTCTaGGGAAGAGGAAGAGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: TLGLCVKDWLVPVFFPYMNQRPL*GRGRVA Trigger: AGCGACTCTTCCTCTTCCTCAGAGGGGTCTTTGGTT...CATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAATCCTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR GCA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGAAATAACTGTGGCGTCTaGGAGGGACGTTGTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GMYTLITPRFCSHDFKVGNNCGV*EGRCLE Trigger: TTCCAGACAACGTCCCTCGCAGACGCCACAGTTATT...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 72 bp | GGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTTaGAAAATGAAAACGGTAGAATCTGGGCAATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GACGMNLLELWV*KMKTVESGQSD Trigger: ATCAGATTGCCCAGATTCTACCGTTTTCATTTTCAAAACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 72 bp | CTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTaGGTGGTACTCCAGGAGTGGAACTCAGTAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LPLSQTLFYCVS*VVLQEWNSVRG Trigger: TCCTCTTACTGAGTTCCACTCCTGGAGTACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 72 bp | AAGGGGTTATCTTCCACTATCCCAGACACTCTTCTATaGTGTAAGTTTGGTGGTACTCCAGGAGTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: KGLSSTIPDTLL*CKFGGTPGVEL Trigger: GAGTTCCACTCCTGGAGTACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGAGCTTTCTCTCATCCCTaGAGTGTCGGAACCAAATAT | + |
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Preference number: 4 (lower is better) Translates to: GMYTLITPRFCSHDFKVGAFSHP*SVGTKY Trigger: ATATTTGGTTCCGACACTTCAGGGATGAGAGAAAGC...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CCA 90 bp | ATTTGGTTTAATGCGAAGGGAGCCTGCGGGATGAACCTTCTAGAACTGTGGGTTCAAAGACTATATCCATaGTCTTCATTATCGCTACGA | + |
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Preference number: 4 (lower is better) Translates to: IWFNAKGACGMNLLELWVQRLYP*SSLSLR Trigger: TCGTAGCGATAATGAAGACCATGGATATAGTCTTTG...AACCCACAGTTCTAGAAGGTTCATCCCGCAGGCTCCCTTCGCATTAAACCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR GCA 90 bp | AGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGTATATCACTCCAGCGATTaGAAACAAGGTGAAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGYLPLSQTLFYCVSLVVYHSSD*KQGEES Trigger: GCTTTCTTCACCTTGTTTGCAATCGCTGGAGTGATA...TACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | ACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGAAATCTCGGAATGTTAAAAGGAACGCATAATACATaGGGATCATGGCACTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TPRFCSHDFKVGNLGMLKGTHNT*GSWHWN Trigger: GTTCCAGTGCCATGATCCTCATGTATTATGCGTTCC...TTTTAACATTCCGAGATTTCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR TCA 90 bp | ACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGAAATCTCGGAATGTTAAAACCCCTTAATGTGCTCTaGATAGCTTTCTCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: TPRFCSHDFKVGNLGMLKPLNVL*IAFSHP Trigger: GGGATGAGAGAAAGCTATTCAGAGCACATTAAGGGG...TTTTAACATTCCGAGATTTCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CCA 90 bp | AGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGTAATAATAACTAGCATTTaGACCACGCATCGAAACGCA | + |
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Preference number: 4 (lower is better) Translates to: RGYLPLSQTLFYCVSLVVIITSI*TTHRNA Trigger: TGCGTTTCGATGCGTGGTCCAAATGCTAGTTATTAT...TACCACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CCA 90 bp | ACACTAGGATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGACCAAATATAAATGGTaGTCTCACGATAAGTATCAC | + |
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Preference number: 4 (lower is better) Translates to: TLGLCVKDWLVPVFFPYMTKYKW*SHDKYH Trigger: GTGATACTTATCGTGAGACCACCATTTATATTTGGT...CATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAATCCTAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CCA 90 bp | CCAAAGGGGTTATCTTCCACTATCCCAGACACTCTTCTATTGTGTAAGTTTGGTGGAACCAAATATAAATaGTGGTCTCACGATAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: PKGLSSTIPDTLLLCKFGGTKYK*WSHDKY Trigger: ATACTTATCGTGAGACCACCATTTATATTTGGTTCC...ACCAAACTTACACAATAGAAGAGTGTCTGGGATAGTGGAAGATAACCCCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| 3UTR CAA 72 bp | GCCACATATCCTGACATCCATGTACTTAAGACACAGTaGAAATATAATGTATTTCCAAAGGGGTTATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ATYPDIHVLKTQ*KYNVFPKGLSS Trigger: GGAAGATAACCCCTTTGGAAATACATTATATTTCAACTGTGTCTTAAGTACATGGATGTCAGGATATGTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 90 bp | CAGCACCTGCCGCGGCCAGGGGCGCCCTCCGCCTCGACGTCCACGTaGTCCTCGCCGGGGGACGCCGGGTCCGCGAGCTGCAGCTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: QHLPRPGAPSASTST*SSPGDAGSASCSSG Trigger: GCCCGAGCTGCAGCTCGCGGACCCGGCGTCCCCCGGCGAGGAGCACGTGGACGTCGAGGCGGAGGGCGCCCCTGGCCGCGGCAGGTGCTG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 90 bp | TATGGACGTAAACACGGGACAGCTAAACGCAATAACTGTGGCGTCTaGGAGGGACGTTGTCTGGAACGCATAATACATGAGGATCATGGC | + |
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Preference number: 5 (lower is better) Translates to: YGRKHGTAKRNNCGV*EGRCLERIIHEDHG Trigger: GCCATGATCCTCATGTATTATGCGTTCCAGACAACGTCCCTCGCAGACGCCACAGTTATTGCGTTTAGCTGTCCCGTGTTTACGTCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CAA 90 bp | ATTGTGTGTCAAAGACTGGCTTGTACCTGTGTTCTTTCCGTATATGCAAAAGACCAGGGTGCTTTCTTCTaGGCTTCGGGCTCCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: IVCQRLACTCVLSVYAKDQGAFF*ASGSPR Trigger: GCGTGGGGAGCCCGAAGCCAAGAAGAAAGCACCCTG...GTCTTTTGCATATACGGAAAGAACACAGGTACAAGCCAGTCTTTGACACACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS CCA 90 bp | AACCCCGTTTTTCTGTATATTAAGCAAGGGATAATAACTAGCATTTaGACCACGCATCGAAACGCACTGATCTCTACAGCATGGACGCCT | + |
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Preference number: 5 (lower is better) Translates to: NPVFLYIKQGIITSI*TTHRNALISTAWTP Trigger: AGGCGTCCATGCTGTAGAGATCAGTGCGTTTCGATGCGTGGTCCAAATGCTAGTTATTATCCCTTGCTTAATATACAGAAAAACGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS-3UTR CAA 90 bp | GGAATGTACACACTGATCACGCCAAGATTTTGCTCTCATGATTTCAAGGTTGGACCACCGTCCACCAAGTaGGTACATTATCAAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GMYTLITPRFCSHDFKVGPPSTK*VHYQRK Trigger: CTTTCTTTGATAATGTACCAACTTGGTGGACGGTGG...TCCAACCTTGAAATCATGAGAGCAAAATCTTGGCGTGATCAGTGTGTACATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 90 bp | ACCAAATATAAATGGTGGTCTCACGATAAGTATCACTCCAGCGATTaGAAACAAGGTGAAGAAAGCATCCCAGAGGCTATACTTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TKYKWWSHDKYHSSD*KQGEESIPEAILFL Trigger: AAGGAAAAGTATAGCCTCTGGGATGCTTTCTTCACCTTGTTTGCAATCGCTGGAGTGATACTTATCGTGAGACCACCATTTATATTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 72 bp | GCGAGCCGCACGCCCAGGCTCCACACGGCCAGCACCTaGCGCGGCCAGGGGCGCCCTCCGCCTCGACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRTPRLHTAST*RGQGRPPPRRP Trigger: TGGACGTCGAGGCGGAGGGCGCCCCTGGCCGCGGCAGGTGCTGGCCGTGTGGAGCCTGGGCGTGCGGCTCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 72 bp | ACGTGCTCCTCGCCGGGGGACGCCGGGTCCGCGAGCTaGAGCTCGGGCTCGCGCAGCTCCACCGCCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: TCSSPGDAGSAS*SSGSRSSTASA Trigger: AGCCGAGGCGGTGGAGCTGCGCGAGCCCGAGCTGCAGCTCGCGGACCCGGCGTCCCCCGGCGAGGAGCACGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 72 bp | AAACACGGGACAGCTAAACGCAATAACTGTGGCGTCTaGGAGGGACGTTGTCTGGAACGCATAATACATGAG | + |
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Preference number: 6 (lower is better) Translates to: KHGTAKRNNCGV*EGRCLERIIHE Trigger: CTCATGTATTATGCGTTCCAGACAACGTCCCTCGCAGACGCCACAGTTATTGCGTTTAGCTGTCCCGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS GCA 72 bp | AAATGGTGGTCTCACGATAAGTATCACTCCAGCGATTaGAAACAAGGTGAAGAAAGCATCCCAGAGGCTATA | + |
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Preference number: 6 (lower is better) Translates to: KWWSHDKYHSSD*KQGEESIPEAI Trigger: TATAGCCTCTGGGATGCTTTCTTCACCTTGTTTGCAATCGCTGGAGTGATACTTATCGTGAGACCACCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS CAA 90 bp | ATTGCAAACAAGGTGAAGAAAGCATCCCAGAGGCTATACTTTTCCTaGAGAAATATCCAAGCAAATATGGACGTAAACACGGGACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: IANKVKKASQRLYFS*RNIQANMDVNTGQL Trigger: TAGCTGTCCCGTGTTTACGTCCATATTTGCTTGGATATTTCTCAAGGAAAAGTATAGCCTCTGGGATGCTTTCTTCACCTTGTTTGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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| CDS CCA 72 bp | TTTCTGTATATTAAGCAAGGGATAATAACTAGCATTTaGACCACGCATCGAAACGCACTGATCTCTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FLYIKQGIITSI*TTHRNALISTA Trigger: TGCTGTAGAGATCAGTGCGTTTCGATGCGTGGTCCAAATGCTAGTTATTATCCCTTGCTTAATATACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054098.4 |
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