Pregenerated sensors for SLC35F6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029175Ensembl transcript IDs: ENSMUST00000062962.12, ENSMUST00000124474.2, ENSMUST00000143867.8, ENSMUST00000196740.5, ENSMUST00000199052.2
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTaGGGTGAGGCCTTGGGGACAGGGCACCCACAGCCCACCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HPLWQRPHRGVIRDG*GEALGTGHPQPTSL Trigger: CAGACTGGTGGGCTGTGGGTGCCCTGTCCCCAAGGCCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR CCA 90 bp | ATGGGAGTCCGACTGTCACCTAGCAGTCTCTCTTGCTCTCCCTCCTaGGTAGGGAGTCGCCAGCGTCTGGACAGGAAGGCTAGCAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: MGVRLSPSSLSCSPS*VGSRQRLDRKASSG Trigger: ACCACTGCTAGCCTTCCTGTCCAGACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGAGAGACTGCTAGGTGACAGTCGGACTCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR CCA 90 bp | CAGGCCTCAGGATTAAAGCAAGACCTGGTATCCTCCCATCCTCTCTaGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: QASGLKQDLVSSHPL*QRPHRGVIRDGWGE Trigger: CTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTTAATCCTGAGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR TCA 90 bp | ATCTGGTGGCAGCAGAGATCTCACTGCGGGCTCAGCTGGCTTCATTaGTGGGAGTCCGACTGTCACCTAGCAGTCTCTCTTGCTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: IWWQQRSHCGLSWLH*WESDCHLAVSLALP Trigger: AGGGAGAGCAAGAGAGACTGCTAGGTGACAGTCGGACTCCCATCAATGAAGCCAGCTGAGCCCGCAGTGAGATCTCTGCTGCCACCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR TCA 90 bp | CAGGCCTGTGAAGATGATCACTGCACCCCGCAGCATCTGAAAGCTTaGGGCACTGGTCATGTTCAGGGCCACGTACATGATGCTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QACEDDHCTPQHLKA*GTGHVQGHVHDAGP Trigger: GGGACCAGCATCATGTACGTGGCCCTGAACATGACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGCAGTGATCATCTTCACAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
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| 3UTR GCA 90 bp | GGGGCCACACTGGCTCTGAGTTTCTCTAATACAGTGTTATGCAGCTaGCTGTATCAGGGGCCTCTCAGGTCTTTGGCCCAAGCTGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: GATLALSFSNTVLCS*LYQGPLRSLAQAGS Trigger: ACTGCCAGCTTGGGCCAAAGACCTGAGAGGCCCCTGATACAGGCAGCTGCATAACACTGTATTAGAGAAACTCAGAGCCAGTGTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CCA 90 bp | GAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTaGGTCCCAATATTACAGGCCTCAGGATTAAAGCAAGACCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: ELEAESGCHLWACGG*VPILQASGLKQDLV Trigger: TACCAGGTCTTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR CCA 90 bp | TGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTaGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: CSSAAELEAESGCHL*ACGGWVPILQASGL Trigger: TAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR CCA 90 bp | GAGGGCGGTGCCCATAAGGAGGATGAGGAAACCAAGGATCTGCAATaGATAGAAGATCTCCCAGCCCAGTGCGAGGGTAAAGGCCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: EGGAHKEDEETKDLQ*IEDLPAQCEGKGPD Trigger: ATCTGGGCCTTTACCCTCGCACTGGGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGTTTCCTCATCCTCCTTATGGGCACCGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
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| 3UTR GCA 90 bp | CCAAAGGCCCACAGAGATCTGCATAGTAGTGGAATTTGTCACACCTaGTGGGTGGGGCGGTTTTTCCCTCTGCACTTGCCTCTGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: PKAHRDLHSSGICHT*WVGRFFPLHLPLQT Trigger: TGTCTGCAGAGGCAAGTGCAGAGGGAAAAACCGCCCCACCCAGCAGGTGTGACAAATTCCACTACTATGCAGATCTCTGTGGGCCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CCA 90 bp | ATACAGTGTTATGCAGCTGCCTGTATCAGGGGCCTCTCAGGTCTTTaGCCCAAGCTGGCAGTAAGCACAGACCCCTCTTGCCAAACAAGG | + |
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Preference number: 1 (lower is better) Translates to: IQCYAAACIRGLSGL*PKLAVSTDPSCQTR Trigger: CCTTGTTTGGCAAGAGGGGTCTGTGCTTACTGCCAGCTTGGGCCAAAGACCTGAGAGGCCCCTGATACAGGCAGCTGCATAACACTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTaGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: ILAIQARNFVLVQQN*RLRVVAISGPVGAG Trigger: CCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR CCA 90 bp | CCCACAGAGATCTGCATAGTAGTGGAATTTGTCACACCTGCTGGGTaGGGCGGTTTTTCCCTCTGCACTTGCCTCTGCAGACATCATGAG | + |
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Preference number: 1 (lower is better) Translates to: PTEICIVVEFVTPAG*GGFSLCTCLCRHHE Trigger: CTCATGATGTCTGCAGAGGCAAGTGCAGAGGGAAAAACCGCCCCACCCAGCAGGTGTGACAAATTCCACTACTATGCAGATCTCTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CCA 90 bp | AAGGCCCACAGAGATCTGCATAGTAGTGGAATTTGTCACACCTGCTaGGTGGGGCGGTTTTTCCCTCTGCACTTGCCTCTGCAGACATCA | + |
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Preference number: 1 (lower is better) Translates to: KAHRDLHSSGICHTC*VGRFFPLHLPLQTS Trigger: TGATGTCTGCAGAGGCAAGTGCAGAGGGAAAAACCGCCCCACCCAGCAGGTGTGACAAATTCCACTACTATGCAGATCTCTGTGGGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR GCA 90 bp | AATGCTGTGATTAAGGGCTGCCAGAGCTCCAAGGCTCCTTCCGACTaGATTTCTTCTGTTCAGGGTAACAGCCTCTGCAGGGTAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: NAVIKGCQSSKAPSD*ISSVQGNSLCRVTV Trigger: CACTGTTACCCTGCAGAGGCTGTTACCCTGAACAGAAGAAATGCAGTCGGAAGGAGCCTTGGAGCTCTGGCAGCCCTTAATCACAGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR TCA 90 bp | ATGATGATCAACAAGTCACCTGTGATGACTTCACTGAGCTTGTGTTaGCTGTCATGCTTGCTCAGGAGGTCAGCTAGGCCAACTACCACC | + |
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Preference number: 1 (lower is better) Translates to: MMINKSPVMTSLSLC*LSCLLRRSARPTTT Trigger: GGTGGTAGTTGGCCTAGCTGACCTCCTGAGCAAGCATGACAGTCAACACAAGCTCAGTGAAGTCATCACAGGTGACTTGTTGATCATCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR CCA 90 bp | TTACTTCTCCCTGTGACAGATTGTAGTCCAGAGAAGCTGGGGTCTTaGGGACTCAGGACTAATGGAATTGAAGAGTTCCTTCCTTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LLLPVTDCSPEKLGS*GLRTNGIEEFLPSL Trigger: CAAGGAAGGAAGGAACTCTTCAATTCCATTAGTCCTGAGTCCCCAAGACCCCAGCTTCTCTGGACTACAATCTGTCACAGGGAGAAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR GCA 90 bp | AAACAACATTGTAGGGCCTCAGTTTTTATTTTTGTACAAGCCAGCTaGCACACTGTCTCTGTCACCTTGAGTAAAGAGGCACATTTACTT | + |
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Preference number: 1 (lower is better) Translates to: KQHCRASVFIFVQAS*HTVSVTLSKEAHLL Trigger: AAGTAAATGTGCCTCTTTACTCAAGGTGACAGAGACAGTGTGGCAGCTGGCTTGTACAAAAATAAAAACTGAGGCCCTACAATGTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR TCA 90 bp | CTTGGGGACTCAGGACTAATGGAATTGAAGAGTTCCTTCCTTCCTTaGCATATCTTTAGAATCTTTTGCAATCAAATTAAACTGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LGDSGLMELKSSFLP*HIFRIFCNQIKLRA Trigger: AGCCCTCAGTTTAATTTGATTGCAAAAGATTCTAAAGATATGTCAAGGAAGGAAGGAACTCTTCAATTCCATTAGTCCTGAGTCCCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR-3UTR CCA 90 bp | CATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGAGGATGCCCAGCCACTaGCTTGGTGCCAGCCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: HPLWQRPHRGVIRDGWGERMPSH*LGASLR Trigger: CCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCT...CTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGCCTCTTGCTCTCCCTCCTaGGTAGGGAGTCGCCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: PLWQRPHRGVIRDGWGEASCSPS*VGSRQR Trigger: ACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGA...GGCCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | CATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGAGTGGTTGCCATCTCTaGGCCTGTGGGGGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HPLWQRPHRGVIRDGWGESGCHL*ACGGWV Trigger: GACCCAGCCCCCACAGGCCCAGAGATGGCAACCACT...CTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTAGTGGTTGCCATCTCTaGGCCTGTGGGGGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: VQQNWRLRVVAISGPVGASGCHL*ACGGWV Trigger: GACCCAGCCCCCACAGGCCCAGAGATGGCAACCACT...AGCCCCCACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGTAAAGGCCCAGATGACTATGGTGCGCAGGGTGTCTAGCACCATGCGGGTGGCCCAGCCACTGGCTTaGTGCCAGCCTCCGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RVKAQMTMVRRVSSTMRVAQPLA*CQPPVQ Trigger: CTGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGC...CACCCGCATGGTGCTAGACACCCTGCGCACCATAGTCATCTGGGCCTTTACCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCAGCACCCCGCAGCATCTaGAAGCTTGAGGCACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: QSGAVGPLGRRHPARLPAAPRSI*KLEALV Trigger: GACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGC...TGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR GCA 90 bp | CGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCGTTGACTGTCATGCTTaGTCAGGAGGTCAGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: RPTWQKASSASSSTPRGFVDCHA*SGGQLG Trigger: GCCTAGCTGACCTCCTGAGCAAGCATGACAGTCAAC...GAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCCTCCCATCCTCTCTaGCAACGGCCGCACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ESGCHLWACGGWVPILQASSHPL*QRPHRG Trigger: CCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGA...GGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGCACAGCCCACCAGTCTaGATGGCCTCAGCCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: VVAISGPVGAGSQYYRPQHSPPV*MASAIW Trigger: CCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTG...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCCACAGCCCACCAGTCTaGATGGCCTCAGCCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: ESGCHLWACGGWVPILQAHSPPV*MASAIW Trigger: CCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTG...GGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGTAAAGGCCCAGATGACTATGGTGCGCAGGGTGTCTAGCACCATGCGGGTGCAGCCACTGGCTTGGTaGCAGCCTCCGGTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RVKAQMTMVRRVSSTMRVQPLAW*QPPVQE Trigger: TTCCTGGACCGGAGGCTGGCACCAAGCCAGTGGCTG...CACCCGCATGGTGCTAGACACCCTGCGCACCATAGTCATCTGGGCCTTTACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACAAGGAGCAGCGAGAGGATCACGAAGCCGAAGAAGCCCTCGATGCCTACTCAGCCACTGGCTTGGTaGCAGCCTCCGGTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GTRSSERITKPKKPSMPTQPLAW*QPPVQE Trigger: TTCCTGGACCGGAGGCTGGCACCAAGCCAGTGGCTG...AGTAGGCATCGAGGGCTTCTTCGGCTTCGTGATCCTCTCGCTGCTCCTTGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCCCACTAGTCCAGGAAGGCCACTaGGAACAGGCCTGTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TWQKASSASSSTPRGFPLVQEGH*EQACED Trigger: ATCTTCACAGGCCTGTTCTCAGTGGCCTTCCTGGAC...TAGTGGGAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCCCACTCACTGAGCTTGTGTTaGCTGTCATGCTTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLGRRHPARLPAPREGSHSLSLC*LSCLLR Trigger: CCTGAGCAAGCATGACAGTCAACACAAGCTCAGTGA...GTGGGAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR GCA 90 bp | GATCTCCCAGCCCAGTGCGAGGGTAAAGGCCCAGATGACTATGGTGCGCAGGGTGATCTCCCAGCCCAGTaGGAGGGTAAAGGCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: DLPAQCEGKGPDDYGAQGDLPAQ*EGKGPD Trigger: ATCTGGGCCTTTACCCTCGCACTGGGCTGGGAGATC...ACCCTGCGCACCATAGTCATCTGGGCCTTTACCCTCGCACTGGGCTGGGAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGTCATTAGGGATGGGTaGGGTGAGGCCTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: VVAISGPVGAGSQYYRPQVIRDG*GEALGT Trigger: TGTCCCCAAGGCCTCACCCCACCCATCCCTAATGAC...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR CCA 90 bp | CGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCTCCTCTAGCACCATCTaGATGGCAATGATGATCTGG | + |
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Preference number: 2 (lower is better) Translates to: RPTWQKASSASSSTPRGFSSSTI*MAMMIW Trigger: CCAGATCATCATTGCCATCCAGATGGTGCTAGAGGA...GAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCGAGAGGATCACGAAGCCGAAGAAGCCCTCGATGCCTACTGCCTGGAGTGTCATTAGGGATGGGTaGGGTGAGGCCTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SSERITKPKKPSMPTAWSVIRDG*GEALGT Trigger: TGTCCCCAAGGCCTCACCCCACCCATCCCTAATGAC...ACTCCAGGCAGTAGGCATCGAGGGCTTCTTCGGCTTCGTGATCCTCTCGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCACCATGCGGGTGGTGGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAGTCATTAGGGATGGGTaGGGTGAGGCCTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SSTMRVVALSSLVTLMPEVIRDG*GEALGT Trigger: TGTCCCCAAGGCCTCACCCCACCCATCCCTAATGAC...TTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCATGGTGCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAAGAAGTGGTTGCCATCTCTaGGCCTGTGGGGGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LGLWGLGPNITGLRIKARSGCHL*ACGGWV Trigger: GACCCAGCCCCCACAGGCCCAGAGATGGCAACCACT...TCTTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR CCA 90 bp | GGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCAATGCTGCCCAGCCACTGGCTTaGTGCCAGCCTCCGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GTQFLGDADARKVEEGNAAQPLA*CQPPVQ Trigger: CTGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGC...AGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR CAA 90 bp | GTGCGCAGGGTGTCTAGCACCATGCGGGTGGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCAATGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VRRVSSTMRVVALSS*VTLMPEKLKKAMLL Trigger: CAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCATGGTGCTAGACACCCTGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
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| 3UTR CAA 90 bp | CATCTGGTGGCAGCAGAGATCTCACTGCGGGCTCAGCTGGCTTCATaGATGGGAGTCCGACTGTCACCTAGCAGTCTCTCTTGCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLVAAEISLRAQLAS*MGVRLSPSSLSCSP Trigger: GGGAGAGCAAGAGAGACTGCTAGGTGACAGTCGGACTCCCATCAATGAAGCCAGCTGAGCCCGCAGTGAGATCTCTGCTGCCACCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGCTCAGGAGGTCAGCTAGGCCAACTACCACCAGTCCCGCAATAGTGATCGCACCCCGCAGCATCTaGAAGCTTGAGGCACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CLLRRSARPTTTSPAIVIAPRSI*KLEALV Trigger: GACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGC...GATCACTATTGCGGGACTGGTGGTAGTTGGCCTAGCTGACCTCCTGAGCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGAGCCAGGGCAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCAGCTGTGAAGATGATCACTaGACCCCGCAGCATCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRARAIRGCRPTWQKASSCEDDH*TPQHLK Trigger: TTTCAGATGCTGCGGGGTGCAGTGATCATCTTCACA...GCTGGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTGCCCTGGCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTACCTAGCAGTCTCTCTTaGTCTCCCTCCTGGGTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KTWYPPILSGNGRTEGSLPSSLS*SPSWVG Trigger: CCCTACCCAGGAGGGAGAGCAAGAGAGACTGCTAGG...TAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCAATGCTGCTGATGTTGCCTAGCAGAGCCAGGGCAATCAGGGGCTGTCGGATGGCCTCAGCCATCTaGTGGCAGCAGAGATCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KAMLLMLPSRARAIRGCRMASAI*WQQRSH Trigger: GTGAGATCTCTGCTGCCACCAGATGGCTGAGGCCAT...CCGACAGCCCCTGATTGCCCTGGCTCTGCTAGGCAACATCAGCAGCATTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR CAA 90 bp | CGGGTGGTGGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAAAGTaGAAGAAGGCAATGCTGCTGATGTTGCCTAGCAGAGCCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RVVALSSLVTLMPEK*KKAMLLMLPSRARA Trigger: TGCCCTGGCTCTGCTAGGCAACATCAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTAAAGCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGTCCAGGAAGGCCACTaGGAACAGGCCTGTGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: IKARPGILPSSLATAAQRVQEGH*EQACED Trigger: ATCTTCACAGGCCTGTTCTCAGTGGCCTTCCTGGAC...CCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAAAGCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGATGGCCTCAGCCATCTaGTGGCAGCAGAGATCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IKARPGILPSSLATAAQRMASAI*WQQRSH Trigger: GTGAGATCTCTGCTGCCACCAGATGGCTGAGGCCAT...CCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACTTGCCTCTGCAGACATCATGAGAGGGAGTGAGGGTGAAGCATTTAACGCCCACCAGTCTGCATaGCCTCAGCCATCTGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SALASADIMRGSEGEAFNAHQSA*PQPSGG Trigger: GCCACCAGATGGCTGAGGCCATGCAGACTGGTGGGC...GTTAAATGCTTCACCCTCACTCCCTCTCATGATGTCTGCAGAGGCAAGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCGTCTGGACAGGAAGGCTAGCAGTGGTCGGTGCAGCCCATTGTAGAGGGCGGGAAATACCAGGGTTGTaGATTCTTGCCATTCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVWTGRLAVVGAAHCRGREIPGL*ILAIQA Trigger: AGCTTGAATGGCAAGAATTCACAACCCTGGTATTTC...CCGCCCTCTACAATGGGCTGCACCGACCACTGCTAGCCTTCCTGTCCAGACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTATCACTGAGCTTGTGTTaGCTGTCATGCTTGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KTWYPPILSGNGRTEGSLSLSLC*LSCLLR Trigger: CCTGAGCAAGCATGACAGTCAACACAAGCTCAGTGA...TAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCAATGCTGCTGATGTTGCCTAGCAGAGCCAGGGCAATCAGGGGCTGTCGGTGTGAAGATGATCACTaGACCCCGCAGCATCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KAMLLMLPSRARAIRGCRCEDDH*TPQHLK Trigger: TTTCAGATGCTGCGGGGTGCAGTGATCATCTTCACA...CCGACAGCCCCTGATTGCCCTGGCTCTGCTAGGCAACATCAGCAGCATTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCGGGTGGTGGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAAGGAAAGCTTGAGGCACTaGTCATGTTCAGGGCCACGT | + |
|
Preference number: 2 (lower is better) Translates to: MRVVALSSLVTLMPEKLKESLRH*SCSGPR Trigger: ACGTGGCCCTGAACATGACCAGTGCCTCAAGCTTTC...CTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGCGGGTGGTGGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAACAGCATCTGAAAGCTTaGGGCACTGGTCATGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HAGGGTQFLGDADARKVEQHLKA*GTGHVQ Trigger: CTGAACATGACCAGTGCCTCAAGCTTTCAGATGCTG...TTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGTGGATGTTGTGTTTGTAGACAAACTTCTCCTCTAGCACCATCTGGATGGCACAGCCCACCAGTCTaGATGGCCTCAGCCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VGGCCVCRQTSPLAPSGWHSPPV*MASAIW Trigger: CCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTG...CCATCCAGATGGTGCTAGAGGAGAAGTTTGTCTACAAACACAACATCCACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACTTGCCTCTGCAGACATCATGAGAGGGAGTGAGGGTGAAGCATTTAACCCATCTCTGGGCCTGTaGGGGCTGGGTCCCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: SALASADIMRGSEGEAFNPSLGL*GLGPNI Trigger: AATATTGGGACCCAGCCCCCACAGGCCCAGAGATGG...GTTAAATGCTTCACCCTCACTCCCTCTCATGATGTCTGCAGAGGCAAGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCAATGCTGCTGATGCCATCTCTGGGCCTGTaGGGGCTGGGTCCCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: SSLVTLMPEKLKKAMLLMPSLGL*GLGPNI Trigger: AATATTGGGACCCAGCCCCCACAGGCCCAGAGATGG...CATCAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAACCAAGGATCTGCAATGGATAGAAGATCTCCCAGCCCAGTGCGAGGGTAAACCATCTCTGGGCCTGTaGGGGCTGGGTCCCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: ETKDLQWIEDLPAQCEGKPSLGL*GLGPNI Trigger: AATATTGGGACCCAGCCCCCACAGGCCCAGAGATGG...TTTACCCTCGCACTGGGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGGATGCCCAGCCACTaGCTTGGTGCCAGCCTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: ILAIQARNFVLVQQNWRLRMPSH*LGASLR Trigger: CCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCT...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTGCACTTGCCTCTGCAGACATCATGAGAGGGAGTGAGGGTGAAGCATTTGCTCTGCTGTCGGGTTaGTACCTTCCTATAGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PSALASADIMRGSEGEAFALLSG*YLPIVS Trigger: TGAGACTATAGGAAGGTACCAACCCGACAGCAGAGC...AAATGCTTCACCCTCACTCCCTCTCATGATGTCTGCAGAGGCAAGTGCAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGCACAGCCCACCAGTCTaGATGGCCTCAGCCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ILAIQARNFVLVQQNWRLHSPPV*MASAIW Trigger: CCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTG...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGAGGCTGAGAGTGGTTaGCATCTCTGGGCCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IQARNFVLVQQNWRLRVVEAESG*HLWACG Trigger: CCCACAGGCCCAGAGATGGCAACCACTCTCAGCCTC...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGCACTTGCCTCTGCAGACATCATGAGAGGGAGTGAGGGTGAAGCATTTAACGGGGTACAGGTGTGCTaGTCTTTTCTCAGGCTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SALASADIMRGSEGEAFNGVQVC*SFLRLV Trigger: CACTAGCCTGAGAAAAGAGCAGCACACCTGTACCCC...GTTAAATGCTTCACCCTCACTCCCTCTCATGATGTCTGCAGAGGCAAGTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CAA 90 bp | AGACCCCTCTTGCCAAACAAGGTACAACTCCAGGCTTCAGTCTCCTaGAGAATGGAAGAAGCTCTGCTGTCGGGTTGGTACCTTCCTATA | + |
|
Preference number: 2 (lower is better) Translates to: RPLLPNKVQLQASVS*RMEEALLSGWYLPI Trigger: TATAGGAAGGTACCAACCCGACAGCAGAGCTTCTTCCATTCTCAAGGAGACTGAAGCCTGGAGTTGTACCTTGTTTGGCAAGAGGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGATGGCCTCAGCCATCTaGTGGCAGCAGAGATCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ILAIQARNFVLVQQNWRLMASAI*WQQRSH Trigger: GTGAGATCTCTGCTGCCACCAGATGGCTGAGGCCAT...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGATGAGGAAACCAAGGATCTGCAATGGATAGAAGATCTCCCAGCCCAGACCAAGGATCTGCAATaGATAGAAGATCTCCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KEDEETKDLQWIEDLPAQTKDLQ*IEDLPA Trigger: GGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGT...CTGGGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGTTTCCTCATCCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTTTACTAGTGAGTGGCCACTCAGCCATTCTCATAAGCAATGCTGTGATTATGGCCTCAGCCATCTaGTGGCAGCAGAGATCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SVLLVSGHSAILISNAVIMASAI*WQQRSH Trigger: GTGAGATCTCTGCTGCCACCAGATGGCTGAGGCCAT...AATCACAGCATTGCTTATGAGAATGGCTGAGTGGCCACTCACTAGTAAAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCCTCGATGCCTACTGCCTGGAGTGGGTGGATGTTGTGTTTGTAGACAAAATGGCAATGATGATCTaGGCCATGATGATCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: EALDAYCLEWVDVVFVDKMAMMI*AMMINK Trigger: CTTGTTGATCATCATGGCCCAGATCATCATTGCCAT...TTTGTCTACAAACACAACATCCACCCACTCCAGGCAGTAGGCATCGAGGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGCTCGTCTTGCTCTCCCTCCTaGGTAGGGAGTCGCCAGCGT | + |
|
Preference number: 2 (lower is better) Translates to: KLVYNRNTRVVNSCHSSSSCSPS*VGSRQR Trigger: ACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGA...CGAGCTTGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGCTCGGCCTGGTCTACACCATaGGTTTCAGCACAGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KLVYNRNTRVVNSCHSSSAWSTP*VSAQSG Trigger: CCCTGACTGTGCTGAAACTCATGGTGTAGACCAGGC...CGAGCTTGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR-3UTR CCA 90 bp | CATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAGTCATTAGGGATGGGTaGGGTGAGGCCTTGGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HDKLVYNRNTRVVNSCHSVIRDG*GEALGT Trigger: TGTCCCCAAGGCCTCACCCCACCCATCCCTAATGAC...TGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGAAATACCAGGGTTGTaGATTCTTGCCATTCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IQARNFVLVQQNWRLRVVEIPGL*ILAIQA Trigger: AGCTTGAATGGCAAGAATTCACAACCCTGGTATTTC...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
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| 3UTR-3UTR GCA 90 bp | TACCATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTATGCACACCTGTGCTaGAGAGCAGTCAGACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: YHDKLVYNRNTRVVNSCHYAHLC*RAVRPG Trigger: ACCAGGTCTGACTGCTCTGCAGCACAGGTGTGCATA...ATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR CAA 90 bp | GTTTTTATTTTTGTACAAGCCAGCTGCCACACTGTCTCTGTCACCTaGAGTAAAGAGGCACATTTACTTCTCCCTGTGACAGATTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VFIFVQASCHTVSVT*SKEAHLLLPVTDCS Trigger: ACTACAATCTGTCACAGGGAGAAGTAAATGTGCCTCTTTACTCAAGGTGACAGAGACAGTGTGGCAGCTGGCTTGTACAAAAATAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| 3UTR-3UTR CAA 90 bp | CCCGCAATAGTGATCAGGATGCCCAGCCACTGGCTTGGTGCCAGCCTCCGGTCCTGCCCAGCCACTGGCTaGGTGCCAGCCTCCGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PAIVIRMPSHWLGASLRSCPATG*VPASGP Trigger: TGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGCA...GGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCTGATCACTATTGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR CCA 72 bp | ACCAGTCCCGCAATAGTGATCAGGATGCCCAGCCACTaGCTTGGTGCCAGCCTCCGGTCCAGGAAGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: TSPAIVIRMPSH*LGASLRSRKAT Trigger: AGTGGCCTTCCTGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCTGATCACTATTGCGGGACTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| 3UTR CCA 72 bp | CACAGCCCACCAGTCTGCATGGCCTCAGCCATCTGGTaGCAGCAGAGATCTCACTGCGGGCTCAGCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSPPVCMASAIW*QQRSHCGLSWL Trigger: AAGCCAGCTGAGCCCGCAGTGAGATCTCTGCTGCCACCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTCTGGACAGGAAGGCTAGCAGTGGTCGGTGCAGCCCATTGTAGAGGGCGGGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SVWTGRLAVVGAAHCRGRVALSS*VTLMPE Trigger: TTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCAC...CCGCCCTCTACAATGGGCTGCACCGACCACTGCTAGCCTTCCTGTCCAGACGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
||
| 3UTR GCA 72 bp | TTGATGGGAGTCCGACTGTCACCTAGCAGTCTCTCTTaGTCTCCCTCCTGGGTAGGGAGTCGCCAGCGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LMGVRLSPSSLS*SPSWVGSRQRL Trigger: CAGACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGAGAGACTGCTAGGTGACAGTCGGACTCCCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCCTGATGCCCGAAAAGTaGAAGAAGGCAATGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ESGCHLWACGGWVPILQALMPEK*KKAMLL Trigger: CAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAG...GGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR CCA 72 bp | GGATTAAAGCAAGACCTGGTATCCTCCCATCCTCTCTaGCAACGGCCGCACAGAGGGGTCATTAGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLKQDLVSSHPL*QRPHRGVIRDG Trigger: CCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTTAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| 3UTR CCA 72 bp | ACATTATGCACACCTGTGCTGCAGAGCAGTCAGACCTaGTGCACACCCCAAGCCACGGCTGGGTCAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TLCTPVLQSSQT*CTPQATAGSET Trigger: AGTTTCTGACCCAGCCGTGGCTTGGGGTGTGCACCAGGTCTGACTGCTCTGCAGCACAGGTGTGCATAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR TCA 72 bp | TGGGTCTGGATCCTGGGAGCGGGGCCACACTGGCTCTaGGTTTCTCTAATACAGTGTTATGCAGCTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WVWILGAGPHWL*VSLIQCYAAAC Trigger: ACAGGCAGCTGCATAACACTGTATTAGAGAAACTCAGAGCCAGTGTGGCCCCGCTCCCAGGATCCAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR TCA 72 bp | CAGCAGAGATCTCACTGCGGGCTCAGCTGGCTTCATTaGTGGGAGTCCGACTGTCACCTAGCAGTCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQRSHCGLSWLH*WESDCHLAVSL Trigger: AAGAGAGACTGCTAGGTGACAGTCGGACTCCCATCAATGAAGCCAGCTGAGCCCGCAGTGAGATCTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR GCA 72 bp | AGGATGTTGGGGCTGCAAGGCACCAAAGACACATTATaGACACCTGTGCTGCAGAGCAGTCAGACCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RMLGLQGTKDTL*TPVLQSSQTWC Trigger: GCACCAGGTCTGACTGCTCTGCAGCACAGGTGTGCATAATGTGTCTTTGGTGCCTTGCAGCCCCAACATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR CCA 72 bp | GCTGAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTaGGTCCCAATATTACAGGCCTCAGGATTAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AESGCHLWACGG*VPILQASGLKQ Trigger: TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| 3UTR GCA 72 bp | CTTTGGCCCAAGCTGGCAGTAAGCACAGACCCCTCTTaGCAAACAAGGTACAACTCCAGGCTTCAGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWPKLAVSTDPS*QTRYNSRLQSP Trigger: AGGAGACTGAAGCCTGGAGTTGTACCTTGTTTGGCAAGAGGGGTCTGTGCTTACTGCCAGCTTGGGCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR GCA 72 bp | ATTAAGGGCTGCCAGAGCTCCAAGGCTCCTTCCGACTaGATTTCTTCTGTTCAGGGTAACAGCCTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IKGCQSSKAPSD*ISSVQGNSLCR Trigger: CCTGCAGAGGCTGTTACCCTGAACAGAAGAAATGCAGTCGGAAGGAGCCTTGGAGCTCTGGCAGCCCTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTGCAGCCCATTGTAGAGGGCGGTGCCCATAAGGAGGATGAGGAAACCAAGTTCACTGAGCTTGTGTaGACTGTCATGCTTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVQPIVEGGAHKEDEETKFTELV*TVMLAQ Trigger: CTGAGCAAGCATGACAGTCAACACAAGCTCAGTGAA...CTTGGTTTCCTCATCCTCCTTATGGGCACCGCCCTCTACAATGGGCTGCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR TCA 72 bp | GAAGATGATCACTGCACCCCGCAGCATCTGAAAGCTTaGGGCACTGGTCATGTTCAGGGCCACGTACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EDDHCTPQHLKA*GTGHVQGHVHD Trigger: ATCATGTACGTGGCCCTGAACATGACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGCAGTGATCATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
||
| 3UTR GCA 72 bp | AGCCCTAGAAATCCACCCCAAAGGCCCACAGAGATCTaGATAGTAGTGGAATTTGTCACACCTGCTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPRNPPQRPTEI*IVVEFVTPAGW Trigger: CCACCCAGCAGGTGTGACAAATTCCACTACTATGCAGATCTCTGTGGGCCTTTGGGGTGGATTTCTAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR GCA 72 bp | GAGGATCACGAAGCCGAAGAAGCCCTCGATGCCTACTaGCTGGAGTGGGTGGATGTTGTGTTTGTAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: EDHEAEEALDAY*LEWVDVVFVDK Trigger: TTTGTCTACAAACACAACATCCACCCACTCCAGGCAGTAGGCATCGAGGGCTTCTTCGGCTTCGTGATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR CCA 72 bp | ATCTGCATAGTAGTGGAATTTGTCACACCTGCTGGGTaGGGCGGTTTTTCCCTCTGCACTTGCCTCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ICIVVEFVTPAG*GGFSLCTCLCR Trigger: TCTGCAGAGGCAAGTGCAGAGGGAAAAACCGCCCCACCCAGCAGGTGTGACAAATTCCACTACTATGCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR CCA 72 bp | GAAGCCGAAGAAGCCCTCGATGCCTACTGCCTGGAGTaGGTGGATGTTGTGTTTGTAGACAAACTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EAEEALDAYCLE*VDVVFVDKLLL Trigger: GAGGAGAAGTTTGTCTACAAACACAACATCCACCCACTCCAGGCAGTAGGCATCGAGGGCTTCTTCGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR GCA 72 bp | GCCACACTGGCTCTGAGTTTCTCTAATACAGTGTTATaGAGCTGCCTGTATCAGGGGCCTCTCAGGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ATLALSFSNTVL*SCLYQGPLRSL Trigger: CAAAGACCTGAGAGGCCCCTGATACAGGCAGCTGCATAACACTGTATTAGAGAAACTCAGAGCCAGTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR CCA 72 bp | GCCCATAAGGAGGATGAGGAAACCAAGGATCTGCAATaGATAGAAGATCTCCCAGCCCAGTGCGAGGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHKEDEETKDLQ*IEDLPAQCEGK Trigger: TTTACCCTCGCACTGGGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGTTTCCTCATCCTCCTTATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
||
| 3UTR CCA 72 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTaGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IQARNFVLVQQN*RLRVVAISGPV Trigger: CACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGAGTGAGGGTGAAGCATTTAACCTAATGCTGGGGATGTCAGATTACCGACAGGCTTCAGTCTCCTaGAGAATGGAAGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGSEGEAFNLMLGMSDYRQASVS*RMEEAL Trigger: CAGAGCTTCTTCCATTCTCAAGGAGACTGAAGCCTG...TCGGTAATCTGACATCCCCAGCATTAGGTTAAATGCTTCACCCTCACTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCAATGCTGCTGATGTTGTTCACTGAGCTTGTGTaGACTGTCATGCTTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLVTLMPEKLKKAMLLMLFTELV*TVMLAQ Trigger: CTGAGCAAGCATGACAGTCAACACAAGCTCAGTGAA...CAACATCAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCATCTGGATGGCAATGATGATCTGGGCCATGATGATCAACAAGTCACCTGCAGCATCTGAAAGCTaGAGGCACTGGTCATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: STIWMAMMIWAMMINKSPAASES*RHWSCS Trigger: TGAACATGACCAGTGCCTCAAGCTTTCAGATGCTGC...AGGTGACTTGTTGATCATCATGGCCCAGATCATCATTGCCATCCAGATGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
||
| 3UTR CCA 72 bp | CCTGTGACAGATTGTAGTCCAGAGAAGCTGGGGTCTTaGGGACTCAGGACTAATGGAATTGAAGAGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PVTDCSPEKLGS*GLRTNGIEEFL Trigger: AAGGAACTCTTCAATTCCATTAGTCCTGAGTCCCCAAGACCCCAGCTTCTCTGGACTACAATCTGTCACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGCTCGGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLVYNRNTRVVNSCHSSSVALSS*VTLMPE Trigger: TTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCAC...CGAGCTTGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR CCA 72 bp | TTCTCCTCTAGCACCATCTGGATGGCAATGATGATCTaGGCCATGATGATCAACAAGTCACCTGTGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: FSSSTIWMAMMI*AMMINKSPVMT Trigger: AGTCATCACAGGTGACTTGTTGATCATCATGGCCCAGATCATCATTGCCATCCAGATGGTGCTAGAGGAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| 3UTR TCA 72 bp | CTGAGTTTAAGGCCAGCTCTGGGCCACATAGGAAGTTaGATGTTGGTACCACACAGTAAGACTTTTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLRPALGHIGS*MLVPHSKTFAS Trigger: TGAAGCAAAAGTCTTACTGTGTGGTACCAACATTCAACTTCCTATGTGGCCCAGAGCTGGCCTTAAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR GCA 72 bp | TGTAGGGCCTCAGTTTTTATTTTTGTACAAGCCAGCTaGCACACTGTCTCTGTCACCTTGAGTAAAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRASVFIFVQAS*HTVSVTLSKEA Trigger: TGCCTCTTTACTCAAGGTGACAGAGACAGTGTGGCAGCTGGCTTGTACAAAAATAAAAACTGAGGCCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGCTCGCTAAATCTCTGTGAGTaGGAGGTTAGCCTGGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KLVYNRNTRVVNSCHSSSLNLCE*EVSLVY Trigger: GTAGACCAGGCTAACCTCCAACTCACAGAGATTTAG...CGAGCTTGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGGGCACCCACAGCCCACCAGTCTGCATGGCCTCAGCCATCTGGTGGCACTCTCCCAGGAACATaGCCACTGCCTGGACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDRAPTAHQSAWPQPSGGTLPGT*PLPGRR Trigger: CCTTCGTCCAGGCAGTGGGCATGTTCCTGGGAGAGT...GCCACCAGATGGCTGAGGCCATGCAGACTGGTGGGCTGTGGGTGCCCTGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGCCCAGCCACTGGCTTaGTGCCAGCCTCCGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVAISGPVGAGSQYYRPQAQPLA*CQPPVQ Trigger: CTGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGC...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | ATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGCAGCCACTGGCTTGGTaGCAGCCTCCGGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILSGNGRTEGSLGMGGVRQPLAW*QPPVQE Trigger: TTCCTGGACCGGAGGCTGGCACCAAGCCAGTGGCTG...CCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCCCACGGCTGGACGAAGGGATaGTTGAAGCTGTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGRRHPARLPAPREGSHGWTKG*LKLCSW Trigger: CCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGCC...GTGGGAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124474.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGCCGGATGCTTGAAGCTGTaGTCCTGGCTTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PLWQRPHRGVIRDGWGEAGCLKL*SWLPPQ Trigger: CTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCC...GGCCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATGCACCCCGCAGCATCTaGAAGCTTGAGGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGILPSSLATAAQRGHAPRSI*KLEALV Trigger: GACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGC...ATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CCTAGCAGAGCCAGGGCAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCCGAAGCCGAAGAAGCTaGCTGGAGTGGGTGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRARAIRGCRPTWQKASRSRRS*LEWVDV Trigger: AACATCCACCCACTCCAGGCAGCTTCTTCGGCTTCG...GGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTGCCCTGGCTCTGCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199052.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGTGTTGAAGGGCTGCTaGGGCTCTACACTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLWQRPHRGVIRDGWGEVLKGC*GSTLEA Trigger: AGCCTCCAGTGTAGAGCCCCAGCAGCCCTTCAACAC...CTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | GGCAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGGCCGAAGAAGCTGCCTaGAGTGGGTGGATGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNQGLSAHLAEGIQRVFQAEEAA*SGWMLC Trigger: ACACAACATCCACCCACTCCAGGCAGCTTCTTCGGC...CTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199052.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCAGCGAGAGGATCACGAAGCCGAAGAAGCCCTCGATGCCTACTGCCTGGGGACGAAGGGATGCTTaGAGCTGTGCTCCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSERITKPKKPSMPTAWGRRDA*SCAPGF Trigger: GAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCC...CCAGGCAGTAGGCATCGAGGGCTTCTTCGGCTTCGTGATCCTCTCGCTGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124474.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGCCTCACTGAGCTTGTGTTaGCTGTCATGCTTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWQRPHRGVIRDGWGEASLSLC*LSCLLR Trigger: CCTGAGCAAGCATGACAGTCAACACAAGCTCAGTGA...GGCCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTGGGGTGAGGCCTGTGAAGATGATCACTaGACCCCGCAGCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLWQRPHRGVIRDGWGEACEDDH*TPQHLK Trigger: TTTCAGATGCTGCGGGGTGCAGTGATCATCTTCACA...GGCCTCACCCCACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGTTGACTGTCATGCTTaGTCAGGAGGTCAGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVAISGPVGAGSQYYRPQVDCHA*SGGQLG Trigger: GCCTAGCTGACCTCCTGAGCAAGCATGACAGTCAAC...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGGATCTCCCAGCCCAGTaGGAGGGTAAAGGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVQQNWRLRVVAISGPVDLPAQ*EGKGPD Trigger: ATCTGGGCCTTTACCCTCGCACTGGGCTGGGAGATC...CACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | AGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCATTGAAGCTGTGCTCCTaGCTTCCTCCACAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGCHLWACGGWVPILQASLKLCS*LPPQPS Trigger: TGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAA...TGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCGAGAGGATCACGAAGCCGAAGAAGCCCTCGATGCCTACTGCCTGGAGTTTGAAGCTGTGCTCCTaGCTTCCTCCACAGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSERITKPKKPSMPTAWSLKLCS*LPPQPS Trigger: TGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAA...ACTCCAGGCAGTAGGCATCGAGGGCTTCTTCGGCTTCGTGATCCTCTCGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124474.2 |
||
| CDS-3UTR CCA 90 bp | GGCAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGAGAAGCTGCCTGGAGTaGGTGGATGTTGTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNQGLSAHLAEGIQRVFQRSCLE*VDVVFV Trigger: TACAAACACAACATCCACCCACTCCAGGCAGCTTCT...CTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199052.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAAGGACGAAGGGATGCTTaGAGCTGTGCTCCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWACGGWVPILQASGLKQGRRDA*SCAPGF Trigger: GAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCC...TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
||
| CDS-3UTR TCA 90 bp | AAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGTCCAGGAAGGCCACTaGGAACAGGCCTGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTWYPPILSGNGRTEGSLVQEGH*EQACED Trigger: ATCTTCACAGGCCTGTTCTCAGTGGCCTTCCTGGAC...TAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGTCACTGAGCTTGTGTTaGCTGTCATGCTTGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVAISGPVGAGSQYYRPQSLSLC*LSCLLR Trigger: CCTGAGCAAGCATGACAGTCAACACAAGCTCAGTGA...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTAGAAGGCAATGCTGCTaGTGTTGCCTAGCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KARPGILPSSLATAAQRGRRQCC*CCLAEP Trigger: TGGCTCTGCTAGGCAACATCAGCAGCATTGCCTTCT...ACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGAGGGTGTTGAAGGGCTaGTGGGGCTCTACACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IKARPGILPSSLATAAQRRVLKG*WGSTLE Trigger: CTCCAGTGTAGAGCCCCAGCAGCCCTTCAACACCCT...CCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | TTGGGCAGGAAGGCTGAGTTTAAGGCCAGCTCTGGGCCACATAGGAAGTTGAATCAGCCACTGGCTTGGTaGCAGCCTCCGGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGRKAEFKASSGPHRKLNQPLAW*QPPVQE Trigger: TTCCTGGACCGGAGGCTGGCACCAAGCCAGTGGCTG...ATTCAACTTCCTATGTGGCCCAGAGCTGGCCTTAAACTCAGCCTTCCTGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAACGAAGAAGCCCTCGATaGCTACTGCCTGGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWACGGWVPILQASGLKQRRSPR*LLPGVG Trigger: ACCCACTCCAGGCAGTAGGCATCGAGGGCTTCTTCG...TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAAGACCTAGCAGTCTCTCTTaGTCTCCCTCCTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLWGLGPNITGLRIKARPSSLS*SPSWVG Trigger: CCCTACCCAGGAGGGAGAGCAAGAGAGACTGCTAGG...TCTTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAACCTAGCAGTCTCTCTTaGTCTCCCTCCTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWACGGWVPILQASGLKQPSSLS*SPSWVG Trigger: CCCTACCCAGGAGGGAGAGCAAGAGAGACTGCTAGG...TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAAGCTGGGGCTCTACACTaGAGGCTGACTGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWACGGWVPILQASGLKQAGALH*RLTVFC Trigger: GCAGAAGACAGTCAGCCTCCAGTGTAGAGCCCCAGC...TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | TGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGAAAGCTTGAGGCACTaGTCATGTTCAGGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: WYPPILSGNGRTEGSLGMESLRH*SCSGPR Trigger: ACGTGGCCCTGAACATGACCAGTGCCTCAAGCTTTC...CATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| 3UTR CAA 72 bp | GCAGCAGAGATCTCACTGCGGGCTCAGCTGGCTTCATaGATGGGAGTCCGACTGTCACCTAGCAGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAEISLRAQLAS*MGVRLSPSSLS Trigger: AGAGAGACTGCTAGGTGACAGTCGGACTCCCATCAATGAAGCCAGCTGAGCCCGCAGTGAGATCTCTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTTTCTGCCTTGGCATTTaGGCAGGTAGAAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KARPGILPSSLATAAQRGFCLGI*AGRRQQ Trigger: TTGCTGCCTTCTACCTGCTCAAATGCCAAGGCAGAA...ACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062962.12 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| CDS-3UTR TCA 90 bp | TGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGTCCAGGAAGGCCACTaGGAACAGGCCTGTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSAAELEAESGCHLWACVQEGH*EQACED Trigger: ATCTTCACAGGCCTGTTCTCAGTGGCCTTCCTGGAC...ACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGCCCAGCCACTGGCTTaGTGCCAGCCTCCGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIQARNFVLVQQNWRLRAQPLA*CQPPVQ Trigger: CTGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGC...TCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| 3UTR CAA 72 bp | ATGCCCGAAAAGTTGAAGAAGGCAATGCTGCTGATGTaGCCTAGCAGAGCCAGGGCAATCAGGGGCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPEKLKKAMLLM*PSRARAIRGCR Trigger: CCGACAGCCCCTGATTGCCCTGGCTCTGCTAGGCAACATCAGCAGCATTGCCTTCTTCAACTTTTCGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
||
| 3UTR CAA 72 bp | GTGTCTAGCACCATGCGGGTGGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSTMRVVALSS*VTLMPEKLKKA Trigger: TGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCATGGTGCTAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 ENSMUST00000199052.2 |
||
| CDS-3UTR TCA 90 bp | GGAATTTGTCACACCTGCTGGGTGGGGCGGTTTTTCCCTCTGCACTTGCCTCTGTTCTGCCTTGGCATTTaGGCAGGTAGAAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GICHTCWVGRFFPLHLPLFCLGI*AGRRQQ Trigger: TTGCTGCCTTCTACCTGCTCAAATGCCAAGGCAGAA...CAGAGGCAAGTGCAGAGGGAAAAACCGCCCCACCCAGCAGGTGTGACAAATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR TCA 90 bp | GTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGCAGCATCTGAAAGCTTaGGGCACTGGTCATGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQQNWRLRVVAISGPVQHLKA*GTGHVQ Trigger: CTGAACATGACCAGTGCCTCAAGCTTTCAGATGCTG...CACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTCAGGCTAGTGACAATCAGAGGCCATAGGATGTTGGGGCTGCAAGGCGATCTCCCAGCCCAGTaGGAGGGTAAAGGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLRLVTIRGHRMLGLQGDLPAQ*EGKGPD Trigger: ATCTGGGCCTTTACCCTCGCACTGGGCTGGGAGATC...GCCTTGCAGCCCCAACATCCTATGGCCTCTGATTGTCACTAGCCTGAGAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTCAGGCTAGTGACAATCAGAGGCCATAGGATGTTGGGGCTGCAAGGCCTAGCACCATGCGGGTaGTGGCACTCAGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLRLVTIRGHRMLGLQGLAPCG*WHSVPW Trigger: CCAAGGAACTGAGTGCCACCACCCGCATGGTGCTAG...GCCTTGCAGCCCCAACATCCTATGGCCTCTGATTGTCACTAGCCTGAGAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR CCA 90 bp | TATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGGTACCAAGGATCTGCAATaGATAGAAGATCTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPPILSGNGRTEGSLGMGTKDLQ*IEDLPA Trigger: GGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGT...ACCCATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTAGGATGCCCAGCCACTaGCTTGGTGCCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQARNFVLVQQNWRLRVVRMPSH*LGASLR Trigger: CCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCT...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTGTCCTCTAGCACCATCTaGATGGCAATGATGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQQNWRLRVVAISGPVSSSTI*MAMMIW Trigger: CCAGATCATCATTGCCATCCAGATGGTGCTAGAGGA...CACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCCTAGCACCATGCGGGTaGTGGCACTCAGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QARNFVLVQQNWRLRVVALAPCG*WHSVPW Trigger: CCAAGGAACTGAGTGCCACCACCCGCATGGTGCTAG...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTACCAAGGATCTGCAATaGATAGAAGATCTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSAAELEAESGCHLWACTKDLQ*IEDLPA Trigger: GGCTGGGAGATCTTCTATCCATTGCAGATCCTTGGT...ACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | CTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGATCTTGCTCTCCCTCCTaGGTAGGGAGTCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIQARNFVLVQQNWRLRSCSPS*VGSRQR Trigger: ACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGA...TCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCACTCTCCCAGGAACATaGCCACTGCTTTGCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QARNFVLVQQNWRLRVVATLPGT*PLLCRK Trigger: CTTTCGGCAAAGCAGTGGGCATGTTCCTGGGAGAGT...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCGAAAGCTTGAGGCACTaGTCATGTTCAGGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: QARNFVLVQQNWRLRVVAESLRH*SCSGPR Trigger: ACGTGGCCCTGAACATGACCAGTGCCTCAAGCTTTC...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGTCTTGCTCTCCCTCCTaGGTAGGGAGTCGCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILAIQARNFVLVQQNWRLSCSPS*VGSRQR Trigger: ACGCTGGCGACTCCCTACCCAGGAGGGAGAGCAAGA...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR GCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCTGGACGAAGGGATaGTTGAAGCTGTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQARNFVLVQQNWRLRVVAWTKG*LKLCSW Trigger: CCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGGC...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| CDS-3UTR GCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTCGAAGAAGCCCTCGATaGCTACTGCCTGGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQARNFVLVQQNWRLRVVRRSPR*LLPGVG Trigger: ACCCACTCCAGGCAGTAGGCATCGAGGGCTTCTTCG...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGGCTGGGGCTCTACACTaGAGGCTGACTGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILAIQARNFVLVQQNWRLAGALH*RLTVFC Trigger: GCAGAAGACAGTCAGCCTCCAGTGTAGAGCCCCAGC...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CCA 90 bp | CATGCGGGTGGTGGCACTCAGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAAATGGCAATGATGATCTaGGCCATGATGATCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAGGGTQFLGDADARKVEMAMMI*AMMINK Trigger: CTTGTTGATCATCATGGCCCAGATCATCATTGCCAT...TTCAACTTTTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCACCACCCGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199052.2 |
||
| CDS-3UTR CCA 90 bp | CATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGGATGCCCAGCCACTaGCTTGGTGCCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HDKLVYNRNTRVVNSCHSRMPSH*LGASLR Trigger: CCGGAGGCTGGCACCAAGCCAGTGGCTGGGCATCCT...TGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CCA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCTCCTCTAGCACCATCTaGATGGCAATGATGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QARNFVLVQQNWRLRVVASSSTI*MAMMIW Trigger: CCAGATCATCATTGCCATCCAGATGGTGCTAGAGGA...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CCA 90 bp | AGTTCCTTGGTGACGCTGATGCCCGAAAAGTTGAAGAAGGCAATGCTGCTGATGTCCTCTAGCACCATCTaGATGGCAATGATGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVTLMPEKLKKAMLLMSSSTI*MAMMIW Trigger: CCAGATCATCATTGCCATCCAGATGGTGCTAGAGGA...CATCAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAGCGTCACCAAGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199052.2 |
||
| 3UTR CAA 72 bp | TTTCTCAGGCTAGTGACAATCAGAGGCCATAGGATGTaGGGGCTGCAAGGCACCAAAGACACATTATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLRLVTIRGHRM*GLQGTKDTLCT Trigger: TGTGCATAATGTGTCTTTGGTGCCTTGCAGCCCCAACATCCTATGGCCTCTGATTGTCACTAGCCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR GCA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGGTTGACTGTCATGCTTaGTCAGGAGGTCAGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILAIQARNFVLVQQNWRLVDCHA*SGGQLG Trigger: GCCTAGCTGACCTCCTGAGCAAGCATGACAGTCAAC...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTCAGGCTAGTGACAATCAGAGGCCATAGGATGTTGGGGCTGCAAGGCATGGCAATGATGATCTaGGCCATGATGATCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLRLVTIRGHRMLGLQGMAMMI*AMMINK Trigger: CTTGTTGATCATCATGGCCCAGATCATCATTGCCAT...GCCTTGCAGCCCCAACATCCTATGGCCTCTGATTGTCACTAGCCTGAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR TCA 90 bp | CATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAGCACCCCGCAGCATCTaGAAGCTTGAGGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HDKLVYNRNTRVVNSCHSAPRSI*KLEALV Trigger: GACCAGTGCCTCAAGCTTTCAGATGCTGCGGGGTGC...TGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATGGCAATGATGATCTaGGCCATGATGATCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QARNFVLVQQNWRLRVVAMAMMI*AMMINK Trigger: CTTGTTGATCATCATGGCCCAGATCATCATTGCCAT...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| 3UTR CAA 72 bp | TTTGTACAAGCCAGCTGCCACACTGTCTCTGTCACCTaGAGTAAAGAGGCACATTTACTTCTCCCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FVQASCHTVSVT*SKEAHLLLPVT Trigger: TGTCACAGGGAGAAGTAAATGTGCCTCTTTACTCAAGGTGACAGAGACAGTGTGGCAGCTGGCTTGTACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR GCA 90 bp | AAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCAAGCTCGGGATGCTTGAAGCTGTaGTCCTGGCTTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLVYNRNTRVVNSCHSSSGCLKL*SWLPPQ Trigger: CTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCC...CGAGCTTGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTTGTGAAGATGATCACTaGACCCCGCAGCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQARNFVLVQQNWRLRVVCEDDH*TPQHLK Trigger: TTTCAGATGCTGCGGGGTGCAGTGATCATCTTCACA...AACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| 3UTR CAA 72 bp | GAAGAACATCAAGGAAGTCAAAACATCAAGGAGGTGTaGGGCGTGGTGATGCACACCTTTAATTCCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: EEHQGSQNIKEV*GVVMHTFNSIT Trigger: AGTGATGGAATTAAAGGTGTGCATCACCACGCCCAACACCTCCTTGATGTTTTGACTTCCTTGATGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR TCA 90 bp | CATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCCATTCACAGCATCTGAAAGCTTaGGGCACTGGTCATGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDKLVYNRNTRVVNSCHSQHLKA*GTGHVQ Trigger: CTGAACATGACCAGTGCCTCAAGCTTTCAGATGCTG...TGAATGGCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR TCA 90 bp | ATTTACCATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCTTCTGCCTTGGCATTTaGGCAGGTAGAAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYHDKLVYNRNTRVVNSCFCLGI*AGRRQQ Trigger: TTGCTGCCTTCTACCTGCTCAAATGCCAAGGCAGAA...GCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATGGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062962.12 ENSMUST00000143867.8 ENSMUST00000196740.5 |
||
| CDS-3UTR CAA 90 bp | GCAAGACCTGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTGCCCAGCCACTGGCTaGGTGCCAGCCTCCGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARPGILPSSLATAAQRGHCPATG*VPASGP Trigger: TGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGCA...ATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCAGGTCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
||
| CDS-3UTR CAA 90 bp | GGCAATCAGGGGCTGTCGGCCCACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNQGLSAHLAEGIQRVFQFAESV*MEPVTS Trigger: GCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAA...CTGGAAGACGCGCTGGATGCCTTCTGCCAAGTGGGCCGACAGCCCCTGATTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| CDS GCA 90 bp | CCCAGGAACATGCCCACTGCCTGGACGAAGGGATGCTTGAAGCTGTaGTCCTGGCTTCCTCCACAGCCCTCAGCTACAAAGTTGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRNMPTAWTKGCLKL*SWLPPQPSATKLSA Trigger: GGCCGACAACTTTGTAGCTGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGGCAGTGGGCATGTTCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVAISGPVGAGSQYYRPQFAESV*MEPVTS Trigger: GCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAA...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGGCAGAAGGCATCCAGCGCGTCTTCCAGCACCCCGCGAGGGTTCCCACTATGGACGAAGGGATGCTaGAAGCTGTGCTCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: TWQKASSASSSTPRGFPLWTKGC*KLCSWL Trigger: AAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCA...TAGTGGGAACCCTCGCGGGGTGCTGGAAGACGCGCTGGATGCCTTCTGCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124474.2 |
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| CDS-3UTR CAA 90 bp | TGGTATCCTCCCATCCTCTCTGGCAACGGCCGCACAGAGGGGTCATTAGGGATGGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: WYPPILSGNGRTEGSLGMVALSS*VTLMPE Trigger: TTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCAC...CATCCCTAATGACCCCTCTGTGCGGCCGTTGCCAGAGAGGATGGGAGGATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCTGCCCAGCCACTGGCTaGGTGCCAGCCTCCGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: QARNFVLVQQNWRLRVVACPATG*VPASGP Trigger: TGGACCGGAGGCTGGCACCAAGCCAGTGGCTGGGCA...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS CCA 90 bp | AACATGCCCACTGCCTGGACGAAGGGATGCTTGAAGCTGTGCTCCTaGCTTCCTCCACAGCCCTCAGCTACAAAGTTGTCGGCCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: NMPTAWTKGCLKLCS*LPPQPSATKLSAHF Trigger: AAAGTGGGCCGACAACTTTGTAGCTGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGGCAGTGGGCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| CDS-3UTR CAA 90 bp | GAGAGTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCGCAGCATCTGAAAGCTaGAGGCACTGGTCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: ESGCHLWACGGWVPILQAAASES*RHWSCS Trigger: TGAACATGACCAGTGCCTCAAGCTTTCAGATGCTGC...GGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCACTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | GTGGTTGCCATCTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGCTGATGCCCGAAAAGTaGAAGAAGGCAATGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VVAISGPVGAGSQYYRPQLMPEK*KKAMLL Trigger: CAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAG...CTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAGATGGCAACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS TCA 90 bp | GAAAAGCAGGGTGTTGAAGGGCTGCTGGGGCTCTACACTGGAGGCTaGCTGTCTTCTGCCTTGGCATTTGAGCAGGTAGAAGGCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: EKQGVEGLLGLYTGG*LSSALAFEQVEGSK Trigger: CTTGCTGCCTTCTACCTGCTCAAATGCCAAGGCAGAAGACAGTCAGCCTCCAGTGTAGAGCCCCAGCAGCCCTTCAACACCCTGCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGGCCTGTGGGGGCTGGGTCCCAATATTACAGGCCTCAGGATTAAAGCAATGGACGAAGGGATGCTaGAAGCTGTGCTCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LWACGGWVPILQASGLKQWTKGC*KLCSWL Trigger: AAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCA...TTGCTTTAATCCTGAGGCCTGTAATATTGGGACCCAGCCCCCACAGGCCCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: QARNFVLVQQNWRLRVVAFAESV*MEPVTS Trigger: GCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAA...GGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 ENSMUST00000143867.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTAGTGCAGCAGAACTGGAGGCTGAGAGTGGTTGCCATCTCTGGGCCTGTTTCACTGAGCTTGTGTaGACTGTCATGCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: CSSAAELEAESGCHLWACFTELV*TVMLAQ Trigger: CTGAGCAAGCATGACAGTCAACACAAGCTCAGTGAA...ACAGGCCCAGAGATGGCAACCACTCTCAGCCTCCAGTTCTGCTGCACTAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | CTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGAGACTGATGCCCGAAAAGTaGAAGAAGGCAATGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LAIQARNFVLVQQNWRLRLMPEK*KKAMLL Trigger: CAGCAGCATTGCCTTCTTCAACTTTTCGGGCATCAG...TCTCAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | ATTCTTGCCATTCAAGCTCGTAATTTTGTTCTAGTGCAGCAGAACTGGAGGCTGTTCACTGAGCTTGTGTaGACTGTCATGCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ILAIQARNFVLVQQNWRLFTELV*TVMLAQ Trigger: CTGAGCAAGCATGACAGTCAACACAAGCTCAGTGAA...CAGCCTCCAGTTCTGCTGCACTAGAACAAAATTACGAGCTTGAATGGCAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | ATTTACCATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCGTGGCACTCAGTTCCTaGGTGACGCTGATGCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: IYHDKLVYNRNTRVVNSCVALSS*VTLMPE Trigger: TTCGGGCATCAGCGTCACCAAGGAACTGAGTGCCAC...GCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATGGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS-3UTR CAA 90 bp | ATTTACCATGACAAGTTAGTGTATAACAGAAATACCAGGGTTGTGAATTCTTGCGCAGCATCTGAAAGCTaGAGGCACTGGTCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: IYHDKLVYNRNTRVVNSCAASES*RHWSCS Trigger: TGAACATGACCAGTGCCTCAAGCTTTCAGATGCTGC...GCAAGAATTCACAACCCTGGTATTTCTGTTATACACTAACTTGTCATGGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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| CDS CAA 72 bp | TCCCAGGAACATGCCCACTGCTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGCATAAGCCCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SQEHAHCFAESV*MEPVTSISPAR Trigger: CCTGGCCGGGCTTATGCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAAGCAGTGGGCATGTTCCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143867.8 |
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| CDS CAA 72 bp | GCTACAAAGTTGTCGGCCCACTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGCATAAGCCCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATKLSAHFAESV*MEPVTSISPAR Trigger: CCTGGCCGGGCTTATGCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAAGTGGGCCGACAACTTTGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
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| CDS CAA 90 bp | CAGCCCTCAGCTACAAAGTTGTCGGCCCACTTTGCCGAAAGCGTGTaGATGGAGCCGGTGACCAGCATAAGCCCGGCCAGGAACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: QPSATKLSAHFAESV*MEPVTSISPARNNW Trigger: CCAGTTGTTCCTGGCCGGGCTTATGCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAAGTGGGCCGACAACTTTGTAGCTGAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
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| CDS CCA 72 bp | CAGGGCTGGACGAAGGGATGCTTGAAGCTGTGCTCCTaGCTTCCTCCACAGCCCTCAGCTACAAAGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: QGWTKGCLKLCS*LPPQPSATKLS Trigger: CGACAACTTTGTAGCTGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124474.2 |
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| CDS GCA 72 bp | TCCACAGCCCTCAGCTACAAAGTTGTCGGCCCACTTTaGCGAAAGCGTGTTGATGGAGCCGGTGACCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: STALSYKVVGPL*RKRVDGAGDQH Trigger: ATGCTGGTCACCGGCTCCATCAACACGCTTTCGGCAAAGTGGGCCGACAACTTTGTAGCTGAGGGCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000124474.2 |
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| CDS CCA 72 bp | ACTGCCTGGACGAAGGGATGCTTGAAGCTGTGCTCCTaGCTTCCTCCACAGCCCTCAGCTACAAAGTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: TAWTKGCLKLCS*LPPQPSATKLS Trigger: CGACAACTTTGTAGCTGAGGGCTGTGGAGGAAGCCAGGAGCACAGCTTCAAGCATCCCTTCGTCCAGGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062962.12 |
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| CDS TCA 72 bp | GGTGTTGAAGGGCTGCTGGGGCTCTACACTGGAGGCTaGCTGTCTTCTGCCTTGGCATTTGAGCAGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GVEGLLGLYTGG*LSSALAFEQVE Trigger: TTCTACCTGCTCAAATGCCAAGGCAGAAGACAGTCAGCCTCCAGTGTAGAGCCCCAGCAGCCCTTCAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062962.12 ENSMUST00000196740.5 |
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