Pregenerated sensors for SLC35F5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026342Ensembl transcript IDs: ENSMUST00000027580.11, ENSMUST00000189443.2, ENSMUST00000190037.7
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGATAGAAGGCACCAGACACCAGGGAGGATCAAAGAGTGCAGTGTaGTCCGAGCAGGTCTTCTCAGACACTCGCCCATCTCTAAGGCGC | + |
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Preference number: 1 (lower is better) Translates to: KIEGTRHQGGSKSAV*SEQVFSDTRPSLRR Trigger: GCGCCTTAGAGATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCTGGTGCCTTCTATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR CCA 90 bp | CCAAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTaGCACCCGCCTGTCAGAAATGTCATCTTACTTAGGTGGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PNSKTEPALTAGSAD*HPPVRNVILLRWSL Trigger: GAGAGACCACCTAAGTAAGATGACATTTCTGACAGGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 90 bp | CTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTGCACTCACTaGGGGCAGTGCAGACTGGCACCCGCCTGTCAGAAATGTCATCTT | + |
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Preference number: 1 (lower is better) Translates to: LTLQTTKLKNRTCTH*GQCRLAPACQKCHL Trigger: AAGATGACATTTCTGACAGGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 90 bp | TTCAGTGTACTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTaGACTCACTGCGGGCAGTGCAGACTGGCACCCGCCTGTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: FSVLTLQTTKLKNRT*THCGQCRLAPACQK Trigger: TTTCTGACAGGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 90 bp | CGGCTCCTGTTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTaGCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: RLLFRRGTETRLQRT*QVVSSLYNVPLSWT Trigger: AGTCCAGCTTAATGGAACATTGTACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACAGGAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| 3UTR GCA 90 bp | TTGCCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGCTGGACTaGAGACCACAGCAGCTAAGTAGCTCCATCCTCTTGAGAAACGCT | + |
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Preference number: 1 (lower is better) Translates to: LPGRLFTVQCSIKLD*RPQQLSSSILLRNA Trigger: AGCGTTTCTCAAGAGGATGGAGCTACTTAGCTGCTGTGGTCTGCAGTCCAGCTTAATGGAACATTGTACAGTGAAGAGACGACCTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189443.2 |
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| 3UTR TCA 90 bp | GTAGAGTTTCAAAGAAGTGAAACGGCTCCTGTTCAGACGAGGCACTaGAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGTA | + |
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Preference number: 1 (lower is better) Translates to: VEFQRSETAPVQTRH*NTSTKNLPGRLFTV Trigger: TACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACAGGAGCCGTTTCACTTCTTTGAAACTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| 3UTR TCA 90 bp | CCGCCTGTCAGAAATGTCATCTTACTTAGGTGGTCTCTCGGGAACTaGAAAGTATGTTTAAACAGAGTCTCCAGAGGAGTTCCGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PPVRNVILLRWSLGN*KVCLNRVSRGVPSL Trigger: AAGGGACGGAACTCCTCTGGAGACTCTGTTTAAACATACTTTTCAGTTCCCGAGAGACCACCTAAGTAAGATGACATTTCTGACAGGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 90 bp | GAATGTATTGCCCCACTAACTAACGTTTCTTCAGTGTACTCACTTTaGAAACTACCAAACTCAAAAACAGAACCTGCACTCACTGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: ECIAPLTNVSSVYSL*KLPNSKTEPALTAG Trigger: GCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACGTTAGTTAGTGGGGCAATACATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR-3UTR GCA 90 bp | AGACACCAGGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACCGTCTACAAAGAACTTaGCAGGTCGTCTCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: RHQGGSKSAVCSEQVFSDRLQRT*QVVSSL Trigger: CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACG...GTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATCTCTAAGGTTAGGGCAACTGGACTaGACAAAACCTACGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KSAVCSEQVFSDTRPSLRLGQLD*TKPTGN Trigger: GTTTCCCGTAGGTTTTGTGCAGTCCAGTTGCCCTAA...CCTTAGAGATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR CAA 90 bp | ATTAAGCTGGACTGCAGACCACAGCAGCTAAGTAGCTCCATCCTCTaGAGAAACGCTGTGCATAGAAATGAGGCTCTCGCACTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: IKLDCRPQQLSSSIL*RNAVHRNEALALFT Trigger: AGTGAACAGTGCGAGAGCCTCATTTCTATGCACAGCGTTTCTCAAGAGGATGGAGCTACTTAGCTGCTGTGGTCTGCAGTCCAGCTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189443.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATCTCTAAGGTGGTCTCTCGGGAACTaGAAAGTATGTTTAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: KSAVCSEQVFSDTRPSLRWSLGN*KVCLNR Trigger: TCTGTTTAAACATACTTTTCAGTTCCCGAGAGACCA...CCTTAGAGATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR-3UTR GCA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTTCCATTAAGCTGGACTaGAGACCACAGCAGCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LISGTKLIRKAGWSFRATSIKLD*RPQQLS Trigger: ACTTAGCTGCTGTGGTCTGCAGTCCAGCTTAATGGA...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189443.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGCTGCGTCTACAAAGAACTTaGCAGGTCGTCTCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: STKNLPGRLFTVQCSIKLRLQRT*QVVSSL Trigger: CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACG...CAGCTTAATGGAACATTGTACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGCTGCTGTTCACTGTCTTCTaGAACTCTCTGAATTCGATG | + |
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Preference number: 2 (lower is better) Translates to: STKNLPGRLFTVQCSIKLLFTVF*NSLNSM Trigger: CATCGAATTCAGAGAGTTCCAGAAGACAGTGAACAG...CAGCTTAATGGAACATTGTACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189443.2 |
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| 3UTR GCA 72 bp | GATAGAAGGCACCAGACACCAGGGAGGATCAAAGAGTaGAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCG | + |
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Preference number: 3 (lower is better) Translates to: DRRHQTPGRIKE*SVLRAGLLRHS Trigger: CGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCTGGTGCCTTCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 72 bp | CTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTaGACTCACTGCGGGCAGTGCAGACTGGCACCCGCC | + |
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Preference number: 3 (lower is better) Translates to: LTLQTTKLKNRT*THCGQCRLAPA Trigger: GGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 72 bp | AAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTaGAGACTGGCACCCGCCTGTCAGAAATGTCATCTT | + |
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Preference number: 3 (lower is better) Translates to: KLKNRTCTHCGQ*RLAPACQKCHL Trigger: AAGATGACATTTCTGACAGGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR GCA 72 bp | TACGTAAGGCAGGTTGGTCCTTTAGGGCAACTGGACTaGACAAAACCTACGGGAAACATCCTTCATTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: YVRQVGPLGQLD*TKPTGNILHFE Trigger: TTCAAAATGAAGGATGTTTCCCGTAGGTTTTGTGCAGTCCAGTTGCCCTAAAGGACCAACCTGCCTTACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| 3UTR GCA 72 bp | TTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTaGCAGGTCGTCTCTTCACTGTACAATGTTCCATTA | + |
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Preference number: 3 (lower is better) Translates to: FRRGTETRLQRT*QVVSSLYNVPL Trigger: TAATGGAACATTGTACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| 3UTR GCA 72 bp | GCCCCACTAACTAACGTTTCTTCAGTGTACTCACTTTaGAAACTACCAAACTCAAAAACAGAACCTGCACTC | + |
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Preference number: 3 (lower is better) Translates to: APLTNVSSVYSL*KLPNSKTEPAL Trigger: GAGTGCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACGTTAGTTAGTGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR-3UTR CAA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTGAAACATCCTTCATTTaGAAAATGAAGCAGACGTGT | + |
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Preference number: 3 (lower is better) Translates to: LISGTKLIRKAGWSFRATETSFI*KMKQTC Trigger: ACACGTCTGCTTCATTTTCAAAATGAAGGATGTTTC...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| CDS-3UTR CCA 90 bp | AGGCACCAGACACCAGGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTAGAACTCAGCCCACCTaGCCTTCCTGCCCCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: RHQTPGRIKECSVLRAGLRTQPT*PSCPSM Trigger: CATCGAGGGGCAGGAAGGCCAGGTGGGCTGAGTTCT...AAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCTGGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATGCCATTCGCCTGCGCTaGCTGAAACCACTGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EDQRVQCAPSRSSQTLAHAIRLR*LKPLLW Trigger: CCAGAGCAGTGGTTTCAGTCAGCGCAGGCGAATGGC...ATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATTTCGCCTGCGCTGACTaGAACCACTGCTCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: EDQRVQCAPSRSSQTLAHFACAD*NHCSGN Trigger: ATTCCCAGAGCAGTGGTTTCAGTCAGCGCAGGCGAA...ATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | AAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATCTCTAAGGTGGCTCGATGGGAGCTaGCGAATCTCCATGATATTG | + |
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Preference number: 4 (lower is better) Translates to: KSAVCSEQVFSDTRPSLRWLDGS*RISMIL Trigger: CAATATCATGGAGATTCGCCAGCTCCCATCGAGCCA...CCTTAGAGATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCAAGGCAAAAACTCTTCTaGCTCCTACCATCACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGSKSAVCSEQVFSDTRPRQKLF*LLPSQD Trigger: ATCCTGTGATGGTAGGAGTCAGAAGAGTTTTTGCCT...TGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR GCA 90 bp | AAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCCGCCGAAAACTGCACCTTTTaGATGCACATGTCGGCTATG | + |
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Preference number: 4 (lower is better) Translates to: KLKNRTCTHCGQCRLAPAENCTF*MHMSAM Trigger: CATAGCCGACATGTGCATGCAAAAGGTGCAGTTTTC...GGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | TACCAAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCCTGAAACCACTGCTCTaGGAATTCACACGGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: YQTQKQNLHSLRAVQTGTLKPLL*EFTRFM Trigger: CATGAACCGTGTGAATTCCCAGAGCAGTGGTTTCAG...GGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | AAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCCGCCAAAGGTGCTGAAGAATaGCTTGTTGTACTGCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KLKNRTCTHCGQCRLAPAKGAEE*LVVLRE Trigger: TTCACGCAGTACAACAAGCCATTCTTCAGCACCTTT...GGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| 3UTR CAA 72 bp | GACTGCAGACCACAGCAGCTAAGTAGCTCCATCCTCTaGAGAAACGCTGTGCATAGAAATGAGGCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: DCRPQQLSSSIL*RNAVHRNEALA Trigger: TGCGAGAGCCTCATTTCTATGCACAGCGTTTCTCAAGAGGATGGAGCTACTTAGCTGCTGTGGTCTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189443.2 |
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| CDS-3UTR GCA 90 bp | AGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGTCTGAGATCCTCAAATaGAATGCCTGCAAAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RRGTETRLQRTCQVVSSLSEILK*NACKAG Trigger: GCCCGCTTTGCAGGCATTGCATTTGAGGATCTCAGA...CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCATTGTCTACCTTTCTCTTaGTCATCACAATGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: EDQRVQCAPSRSSQTLAHCLPFS*SSQCRQ Trigger: CTGTCTACATTGTGATGATCAAGAGAAAGGTAGACA...ATGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GTGAAACGGCTCCTGTTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTGCGTAGCTCCATCCTCTTaGGAAACGCTGTGCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKRLLFRRGTETRLQRTCVAPSS*ETLCIE Trigger: TTCTATGCACAGCGTTTCTCAAGAGGATGGAGCTAC...GCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACAGGAGCCGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | CCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGCTGGACTGCAGACCACAGTTACACGGGACTTCTTaGGAGTCTTTTCGGTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PGRLFTVQCSIKLDCRPQLHGTS*ESFRSQ Trigger: TTGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAA...CTGTGGTCTGCAGTCCAGCTTAATGGAACATTGTACAGTGAAGAGACGACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | AAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCCGCCCTAATTTTTGCTACTTaGGTTGCAGTCAATTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KLKNRTCTHCGQCRLAPALIFAT*VAVNFP Trigger: AGGGAAATTGACTGCAACCCAAGTAGCAAAAATTAG...GGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | GGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCACAAAATATTCACTATaGCAACCTGTGTGTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GRIKECSVLRAGLLRHSPTKYSL*QPVCLK Trigger: TTTCAGACACACAGGTTGCCATAGTGAATATTTTGT...GGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | ACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTGGACTGCACAAAATACGAGGTGAGTTCTaGGGATGCCACCCATATCAC | + |
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Preference number: 4 (lower is better) Translates to: TKLIRKAGWSFRATGLHKIRGEF*GCHPYH Trigger: GTGATATGGGTGGCATCCTCAGAACTCACCTCGTAT...TTTGTGCAGTCCAGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR GCA 90 bp | AGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGCATTTGCAGTCTTGTTaGAAGGGCTTCTCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: RRGTETRLQRTCQVVSSLHLQSC*KGFSEI Trigger: GATCTCAGAGAAGCCCTTGCAACAAGACTGCAAATG...CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | GTGAAACGGCTCCTGTTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTGCTTTTCGCAAAGGTGCTaGAGAATGGCTTGTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: VKRLLFRRGTETRLQRTCFSQRC*RMACCT Trigger: AGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAA...GCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACAGGAGCCGTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | ACTACCAAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCATCTTCTGGAACTCTCTaGATTCGATGTTTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: TTKLKNRTCTHCGQCRLASSGTL*IRCFLH Trigger: ATGCAGAAAACATCGAATTCAGAGAGTTCCAGAAGA...TGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR TCA 90 bp | AGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGAAGTGCTTCTTGGTATaGCAAATTTGCCAAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: RRGTETRLQRTCQVVSSLKCFLV*QICQKP Trigger: TGGTTTTTGGCAAATTTGTCATACCAAGAAGCACTT...CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR GCA 90 bp | GTGAAACGGCTCCTGTTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTGCGCACCACACCTCCAATaGTTAAAATTACAGCTAATA | + |
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Preference number: 4 (lower is better) Translates to: VKRLLFRRGTETRLQRTCAPHLQ*LKLQLI Trigger: TATTAGCTGTAATTTTAAGCATTGGAGGTGTGGTGC...GCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACAGGAGCCGTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTCTTGGTCTTTCACAGTaGGATAAGACATCCGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LISGTKLIRKAGWSFRATLGLSQ*DKTSER Trigger: TCTCTCGGATGTCTTATCCCACTGTGAAAGACCAAG...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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| CDS-3UTR CCA 90 bp | TGTTCAGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTACAGTACCACTTTGTTaGGAAACTCAAAGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: CSDEALKHVYKELARSSLTVPLC*ETQSPQ Trigger: TTGAGGACTTTGAGTTTCCCAACAAAGTGGTACTGT...AAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
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| CDS-3UTR GCA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTTGCTTGTATCTGTTGTaGACGCAGCAAAGTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LISGTKLIRKAGWSFRATCLYLL*TQQSNL Trigger: AAGGTTACTTTGCTGCGTGCACAACAGATACAAGCA...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTCTGTTCACTGTCTTCTaGAACTCTCTGAATTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LISGTKLIRKAGWSFRATLFTVF*NSLNSM Trigger: CATCGAATTCAGAGAGTTCCAGAAGACAGTGAACAG...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CCA 90 bp | CGTTTCTTCAGTGTACTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTGCCTCGAGCTTCTCACTTaGGAGATCATGAAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFFSVLTLQTTKLKNRTCLELLT*EIMKLH Trigger: GTGAAGTTTCATGATCTCCCAAGTGAGAAGCTCGAG...GCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR GCA 90 bp | CTGATTTCAGGAACTAAACTGATACGTAAGGCAGGTTGGTCCTTTAGGGCAACTAATAACCAAGAAAACTaGACCTTTTGCATGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LISGTKLIRKAGWSFRATNNQEN*TFCMHM Trigger: CATGTGCATGCAAAAGGTGCAGTTTTCTTGGTTATT...AGTTGCCCTAAAGGACCAACCTGCCTTACGTATCAGTTTAGTTCCTGAAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CCA 90 bp | ACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGTACAATGTTCCATTAAGACAGTACCACTTTGTTaGGAAACTCAAAGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSTKNLPGRLFTVQCSIKTVPLC*ETQSPQ Trigger: TTGAGGACTTTGAGTTTCCCAACAAAGTGGTACTGT...CTTAATGGAACATTGTACAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCCTTACACGGGACTTCTaGGGAGTCTTTTCGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRIKECSVLRAGLLRHSPLTRDF*GVFSVP Trigger: TGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAG...GGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CCA 90 bp | GACATCCGAGAGAGCTTGGCCTCTAACGCATGGCTCGATGGGAGCTaGCGAATCTCCATGATATTGCTGAACCTTACACGGGACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DIRESLASNAWLDGS*RISMILLNLTRDFL Trigger: CAAGAAGTCCCGTGTAAGGTTCAGCAATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGCGTTAGAGGCCAAGCTCTCTCGGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | GGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACACTCGCCCAGTGCTGAAGAATGGCTaGTTGTACTGCGTGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGSKSAVCSEQVFSDTRPVLKNG*LYCVKT Trigger: TGTCTTCACGCAGTACAACAAGCCATTCTTCAGCAC...TGGGCGAGTGTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | AGGCACCAGACACCAGGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTTCCTCTTGTACACTGTaGCCTCCAAGGCTTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RHQTPGRIKECSVLRAGLSSCTL*PPRLPN Trigger: ATTTGGAAGCCTTGGAGGCAACAGTGTACAAGAGGA...AAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCTGGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | AAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCCGCCCGAATCTCCATGATATaGCTGAACCTTACACGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLKNRTCTHCGQCRLAPARISMI*LNLTRD Trigger: GTCCCGTGTAAGGTTCAGCAATATCATGGAGATTCG...GGCGGGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | AGGCACCAGACACCAGGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTAAGAACTACTCATGCTaGTATCTGTTGTGCACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHQTPGRIKECSVLRAGLKNYSC*YLLCTQ Trigger: CTGCGTGCACAACAGATACAAGCATGAGTAGTTCTT...AAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCTGGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | AGACACCAGGGAGGATCAAAGAGTGCAGTGTGCTCCGAGCAGGTCTTCTCAGACAGAAAACTGCACCTTTaGCATGCACATGTCGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RHQGGSKSAVCSEQVFSDRKLHL*HAHVGY Trigger: ATAGCCGACATGTGCATGCAAAAGGTGCAGTTTTCT...GTCTGAGAAGACCTGCTCGGAGCACACTGCACTCTTTGATCCTCCCTGGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | TACCAAACTCAAAAACAGAACCTGCACTCACTGCGGGCAGTGCAGACTGGCACCAAACACATAAACCATTaGCAGTCTTGTTGCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YQTQKQNLHSLRAVQTGTKHINH*QSCCKG Trigger: GCCCTTGCAACAAGACTGCAAATGGTTTATGTGTTT...GGTGCCAGTCTGCACTGCCCGCAGTGAGTGCAGGTTCTGTTTTTGAGTTTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CCA 90 bp | TCAATTTCCCTACAGTCTTCAGTATGGATTCTTGGTCTTTCACAGTaGGATAAGACATCCGAGAGAGCTTGGCCTCTAACGCATGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SISLQSSVWILGLSQ*DKTSERAWPLTHGS Trigger: CGAGCCATGCGTTAGAGGCCAAGCTCTCTCGGATGTCTTATCCCACTGTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | AGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGCTGAAGAATGGCTTGTaGTACTGCGTGAAGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: RRGTETRLQRTCQVVSSLLKNGL*YCVKTY Trigger: GTATGTCTTCACGCAGTACAACAAGCCATTCTTCAG...CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS GCA 90 bp | AACATGGATGTTTTCGCAAAGGTGCTGAAGAATGGCTTGTTGTACTaGGTGAAGACATACGAGGTGAGTTCTGAGGATGCCACCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: NMDVFAKVLKNGLLY*VKTYEVSSEDATHI Trigger: GATATGGGTGGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS-3UTR CAA 90 bp | AGACGAGGCACTGAAACACGTCTACAAAGAACTTGCCAGGTCGTCTCTTCACTGCTTCAGTATGGATTCTaGGTCTTTCACAGTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RRGTETRLQRTCQVVSSLLQYGF*VFHSGI Trigger: TATCCCACTGTGAAAGACCAAGAATCCATACTGAAG...CAGTGAAGAGACGACCTGGCAAGTTCTTTGTAGACGTGTTTCAGTGCCTCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CCA 90 bp | GGGAGTCTTTTCGGTCCCAATGTTTGTGCTCTCGAGCTTCTCACTTaGGAGATCATGAAACTTCACAGGAACATAAAGAGGTTCACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLFGPNVCALELLT*EIMKLHRNIKRFTQ Trigger: TTGAGTGAACCTCTTTATGTTCCTGTGAAGTTTCATGATCTCCCAAGTGAGAAGCTCGAGAGCACAAACATTGGGACCGAAAAGACTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CCA 90 bp | TTTTTGCTACTTGGGTTGCAGTCAATTTCCCTACAGTCTTCAGTATaGATTCTTGGTCTTTCACAGTGGGATAAGACATCCGAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLLGLQSISLQSSV*ILGLSQWDKTSERA Trigger: AGCTCTCTCGGATGTCTTATCCCACTGTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCAACCCAAGTAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTTCAGTGTACTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTGCAGTAGCTCCATCCTCTaGAGAAACGCTGTGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: RFFSVLTLQTTKLKNRTCSSSIL*RNAVHR Trigger: TCTATGCACAGCGTTTCTCAAGAGGATGGAGCTACT...GCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTTCAGTGTACTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTGCTTTTTGCTACTTGGGTaGCAGTCAATTTCCCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: RFFSVLTLQTTKLKNRTCFLLLG*QSISLQ Trigger: CTGTAGGGAAATTGACTGCAACCCAAGTAGCAAAAA...GCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTTCAGTGTACTCACTTTGCAAACTACCAAACTCAAAAACAGAACCTGCCTTGGTATGACAAATTaGCCAAAAACCACACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFFSVLTLQTTKLKNRTCLGMTN*PKTTQS Trigger: GCTTTGTGTGGTTTTTGGCAAATTTGTCATACCAAG...GCAGGTTCTGTTTTTGAGTTTGGTAGTTTGCAAAGTGAGTACACTGAAGAAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS TCA 72 bp | AGGAGAATCACTATCCCCAGGGCCATTCGCCTGCGCTaGCTGAAACCACTGCTCTGGGAATTCACACGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRITIPRAIRLR*LKPLLWEFTRF Trigger: GAACCGTGTGAATTCCCAGAGCAGTGGTTTCAGTCAGCGCAGGCGAATGGCCCTGGGGATAGTGATTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CCA 72 bp | GAGAGCTTGGCCTCTAACGCATGGCTCGATGGGAGCTaGCGAATCTCCATGATATTGCTGAACCTTACACGG | + |
|
Preference number: 6 (lower is better) Translates to: ESLASNAWLDGS*RISMILLNLTR Trigger: CCGTGTAAGGTTCAGCAATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGCGTTAGAGGCCAAGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 90 bp | GCCTCTAACGCATGGCTCGATGGGAGCTGGCGAATCTCCATGATATaGCTGAACCTTACACGGGACTTCTTGGGAGTCTTTTCGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASNAWLDGSWRISMI*LNLTRDFLGVFSVP Trigger: TGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCAATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGCGTTAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS GCA 72 bp | CAGTCTTGTTGCAAGGGCTTCTCTGAGATCCTCAAATaGAATGCCTGCAAAGCGGGCAGAGCCCAGTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QSCCKGFSEILK*NACKAGRAQSK Trigger: TTTGGACTGGGCTCTGCCCGCTTTGCAGGCATTGCATTTGAGGATCTCAGAGAAGCCCTTGCAACAAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 72 bp | GCATGGCTCGATGGGAGCTGGCGAATCTCCATGATATaGCTGAACCTTACACGGGACTTCTTGGGAGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AWLDGSWRISMI*LNLTRDFLGVF Trigger: AAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCAATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS TCA 72 bp | CTTGTTGTACTGCGTGAAGACATACGAGGTGAGTTCTaGGGATGCCACCCATATCACATCAACCAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVVLREDIRGEF*GCHPYHINQQE Trigger: CTCCTGCTGGTTGATGTGATATGGGTGGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 90 bp | AGCTGGCGAATCTCCATGATATTGCTGAACCTTACACGGGACTTCTaGGGAGTCTTTTCGGTCCCAATGTTTGTGCTCTCGAGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SWRISMILLNLTRDF*GVFSVPMFVLSSFS Trigger: TGAGAAGCTCGAGAGCACAAACATTGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCAATATCATGGAGATTCGCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS GCA 72 bp | GCAGCAGGCTTCCCTCTAAATCCTCTTGTACACTGTTaGCTCCAAGGCTTCCAAATAATGAAGCCCAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGFPLNPLVHC*LQGFQIMKPKR Trigger: CCTTTTGGGCTTCATTATTTGGAAGCCTTGGAGGCAACAGTGTACAAGAGGATTTAGAGGGAAGCCTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 90 bp | AGAACAAACATGGATGTTTTCGCAAAGGTGCTGAAGAATGGCTTGTaGTACTGCGTGAAGACATACGAGGTGAGTTCTGAGGATGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RTNMDVFAKVLKNGL*YCVKTYEVSSEDAT Trigger: GGTGGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCATGTTTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 90 bp | TACTTGGGTTGCAGTCAATTTCCCTACAGTCTTCAGTATGGATTCTaGGTCTTTCACAGTGGGATAAGACATCCGAGAGAGCTTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YLGCSQFPYSLQYGF*VFHSGIRHPRELGL Trigger: GAGGCCAAGCTCTCTCGGATGTCTTATCCCACTGTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCAACCCAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 72 bp | AGCAGCAGGCTTCCCTCTAAATCCTCTTGTACACTGTaGCCTCCAAGGCTTCCAAATAATGAAGCCCAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLPSKSSCTL*PPRLPNNEAQK Trigger: CTTTTGGGCTTCATTATTTGGAAGCCTTGGAGGCAACAGTGTACAAGAGGATTTAGAGGGAAGCCTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 72 bp | ATCTCCATGATATTGCTGAACCTTACACGGGACTTCTaGGGAGTCTTTTCGGTCCCAATGTTTGTGCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ISMILLNLTRDF*GVFSVPMFVLS Trigger: CGAGAGCACAAACATTGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCAATATCATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 90 bp | TACAGAACAAACATGGATGTTTTCGCAAAGGTGCTGAAGAATGGCTaGTTGTACTGCGTGAAGACATACGAGGTGAGTTCTGAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: YRTNMDVFAKVLKNG*LYCVKTYEVSSEDA Trigger: GGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCATGTTTGTTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 90 bp | TGGGAGTCTTTTCGGTCCCAATGTTTGTGCTCTCGAGCTTCTCACTaGGGAGATCATGAAACTTCACAGGAACATAAAGAGGTTCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: WESFRSQCLCSRASH*GDHETSQEHKEVHS Trigger: TGAGTGAACCTCTTTATGTTCCTGTGAAGTTTCATGATCTCCCAAGTGAGAAGCTCGAGAGCACAAACATTGGGACCGAAAAGACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 90 bp | CCCCATAACCACAGAAACTCGGACAGAACTGTTCCGATGAGGCCGTaGATAATGATACACAACAGTACCACTTTGTTGGGAAACTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHNHRNSDRTVPMRP*IMIHNSTTLLGNSK Trigger: CTTTGAGTTTCCCAACAAAGTGGTACTGTTGTGTATCATTATCAACGGCCTCATCGGAACAGTTCTGTCCGAGTTTCTGTGGTTATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000189443.2 |
||
| CDS CCA 72 bp | TTCGGTCCCAATGTTTGTGCTCTCGAGCTTCTCACTTaGGAGATCATGAAACTTCACAGGAACATAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FGPNVCALELLT*EIMKLHRNIKR Trigger: CCTCTTTATGTTCCTGTGAAGTTTCATGATCTCCCAAGTGAGAAGCTCGAGAGCACAAACATTGGGACCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 72 bp | ATGGATGTTTTCGCAAAGGTGCTGAAGAATGGCTTGTaGTACTGCGTGAAGACATACGAGGTGAGTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MDVFAKVLKNGL*YCVKTYEVSSE Trigger: CTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CCA 72 bp | AACAAACATGGATGTTTTCGCAAAGGTGCTGAAGAATaGCTTGTTGTACTGCGTGAAGACATACGAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NKHGCFRKGAEE*LVVLREDIRGE Trigger: CTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCATGTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CCA 72 bp | CTTGGGTTGCAGTCAATTTCCCTACAGTCTTCAGTATaGATTCTTGGTCTTTCACAGTGGGATAAGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLQSISLQSSV*ILGLSQWDKTS Trigger: GGATGTCTTATCCCACTGTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCAACCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 72 bp | AACATGGATGTTTTCGCAAAGGTGCTGAAGAATGGCTaGTTGTACTGCGTGAAGACATACGAGGTGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NMDVFAKVLKNG*LYCVKTYEVSS Trigger: AGAACTCACCTCGTATGTCTTCACGCAGTACAACAAGCCATTCTTCAGCACCTTTGCGAAAACATCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 72 bp | TGCAGTCAATTTCCCTACAGTCTTCAGTATGGATTCTaGGTCTTTCACAGTGGGATAAGACATCCGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSQFPYSLQYGF*VFHSGIRHPRE Trigger: CTCTCTCGGATGTCTTATCCCACTGTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
||
| CDS CAA 72 bp | GGAATTCACACGGTTCATGATAAACACATAAACCATTaGCAGTCTTGTTGCAAGGGCTTCTCTGAGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GIHTVHDKHINH*QSCCKGFSEIL Trigger: GAGGATCTCAGAGAAGCCCTTGCAACAAGACTGCAAATGGTTTATGTGTTTATCATGAACCGTGTGAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 90 bp | ACTGCTCTGGGAATTCACACGGTTCATGATAAACACATAAACCATTaGCAGTCTTGTTGCAAGGGCTTCTCTGAGATCCTCAAATGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TALGIHTVHDKHINH*QSCCKGFSEILKCN Trigger: ATTGCATTTGAGGATCTCAGAGAAGCCCTTGCAACAAGACTGCAAATGGTTTATGTGTTTATCATGAACCGTGTGAATTCCCAGAGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027580.11 ENSMUST00000190037.7 |
||
| CDS CAA 72 bp | GAACATAAAGAGGTTCACTCAAAGAACTACTCATGCTaGTATCTGTTGTGCACGCAGCAAAGTAACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EHKEVHSKNYSC*YLLCTQQSNLQ Trigger: CTGAAGGTTACTTTGCTGCGTGCACAACAGATACAAGCATGAGTAGTTCTTTGAGTGAACCTCTTTATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027580.11 |
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