Pregenerated sensors for SLC35F4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021852Ensembl transcript IDs: ENSMUST00000074368.11, ENSMUST00000123534.2, ENSMUST00000138884.8, ENSMUST00000146164.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACTGGTCTAGAGCTCACCAGGGAGGCTGGGCTTGTTGGCCTCTaGGTTCCAGGGTTCCTCTTGTCTCCATTTCCCCAGTGCTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: FTGLELTREAGLVGL*VPGFLLSPFPQCLD Trigger: ATCCAAGCACTGGGGAAATGGAGACAAGAGGAACCCTGGAACTCAGAGGCCAACAAGCCCAGCCTCCCTGGTGAGCTCTAGACCAGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 90 bp | AAGGTCTTTCACTGGTCTAGAGCTCACCAGGGAGGCTGGGCTTGTTaGCCTCTGAGTTCCAGGGTTCCTCTTGTCTCCATTTCCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KVFHWSRAHQGGWAC*PLSSRVPLVSISPV Trigger: CACTGGGGAAATGGAGACAAGAGGAACCCTGGAACTCAGAGGCCAACAAGCCCAGCCTCCCTGGTGAGCTCTAGACCAGTGAAAGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 90 bp | TTTTGGGACAAGGTCTTTCACTGGTCTAGAGCTCACCAGGGAGGCTaGGCTTGTTGGCCTCTGAGTTCCAGGGTTCCTCTTGTCTCCATT | + |
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Preference number: 1 (lower is better) Translates to: FWDKVFHWSRAHQGG*ACWPLSSRVPLVSI Trigger: AATGGAGACAAGAGGAACCCTGGAACTCAGAGGCCAACAAGCCCAGCCTCCCTGGTGAGCTCTAGACCAGTGAAAGACCTTGTCCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR TCA 90 bp | ATCTCAATTTCTCAGTCTGGTTCAGGGCCTACTGCTGTAATCAACTaGCTCCCCAGCAGAAACAGCCCTTTCTCCTCTCACGATGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: ISISQSGSGPTAVIN*LPSRNSPFSSHDAV Trigger: GACAGCATCGTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTAGGCCCTGAACCAGACTGAGAAATTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 90 bp | CAAGCAACACCCTCATGTGGTTTTCCTTGTAAAGCGTTATTGCCTTaGTGTGGACAGGGTGGGGGTGGTGGTGGTTCCAGATATGAATGG | + |
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Preference number: 1 (lower is better) Translates to: QATPSCGFPCKALLP*CGQGGGGGGSRYEW Trigger: CCATTCATATCTGGAACCACCACCACCCCCACCCTGTCCACATCAAGGCAATAACGCTTTACAAGGAAAACCACATGAGGGTGTTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 90 bp | ACTCTGGTGAAGATCAGGAACTGTGATCTCCTGAGGACACGGGCATaGGGACACAGGCATGAGCATTGTAGTCGCAAAGGTTGTTCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: TLVKIRNCDLLRTRA*GHRHEHCSRKGCSS Trigger: TGAAGAACAACCTTTGCGACTACAATGCTCATGCCTGTGTCCTCATGCCCGTGTCCTCAGGAGATCACAGTTCCTGATCTTCACCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR GCA 90 bp | ACTCCTGGTCTCAAGTATTCCTCCTGCTTCAGCCTTTGGAGGGACTaGTCCTTCAGGCTGCATCAGTGCACCCAGCTCTTAATTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: TPGLKYSSCFSLWRD*SFRLHQCTQLLIFF Trigger: AAAGAAAATTAAGAGCTGGGTGCACTGATGCAGCCTGAAGGAGCAGTCCCTCCAAAGGCTGAAGCAGGAGGAATACTTGAGACCAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 90 bp | TTGTTCTTCAGCTCTGGATTTTCCCTTTCTAACAAAGAAACTGTGTaGGTGTGCATGGGTGTGTGTGTGTGCGCGCGTGTGTGTGAATGT | + |
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Preference number: 1 (lower is better) Translates to: LFFSSGFSLSNKETV*VCMGVCVCARVCEC Trigger: ACATTCACACACACGCGCGCACACACACACACCCATGCACACTCACACAGTTTCTTTGTTAGAAAGGGAAAATCCAGAGCTGAAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR TCA 90 bp | CTGCTCCTTCAGGCTGCATCAGTGCACCCAGCTCTTAATTTTCTTTaGAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LLLQAASVHPALNFL*KRKPFSQWLSGMFS Trigger: AGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAAAATTAAGAGCTGGGTGCACTGATGCAGCCTGAAGGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 90 bp | CATCTGGGTAAGGGCAGGCTGGGGGTTGTTCCAAAATATGTTGATTaGCACAAGCAAATCACAATCTTTGCTGTGGCTTATTCTCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: HLGKGRLGVVPKYVD*HKQITIFAVAYSLR Trigger: TCTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 90 bp | ATTTACCAAATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATTaGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATA | + |
|
Preference number: 1 (lower is better) Translates to: IYQITQRPKCPTNRN*HLFRLLSAQLPISI Trigger: TATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTATTTGGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 90 bp | CTACTTACACCAATATTAATTAAATCCATCTGGGTAAGGGCAGGCTaGGGGTTGTTCCAAAATATGTTGATTGACACAAGCAAATCACAA | + |
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Preference number: 1 (lower is better) Translates to: LLTPILIKSIWVRAG*GLFQNMLIDTSKSQ Trigger: TTGTGATTTGCTTGTGTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCAGATGGATTTAATTAATATTGGTGTAAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 90 bp | AATCACAATCTTTGCTGTGGCTTATTCTCTCAGACCCTTCTTTGCTaGGGACAAGGAATGGACTCGATAATAATTCTACAAGTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: NHNLCCGLFSQTLLC*GQGMDSIIILQVNS Trigger: AGAATTAACTTGTAGAATTATTATCGAGTCCATTCCTTGTCCTCAGCAAAGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 90 bp | TTTGGCAATCTTTATCTACTTACACCAATATTAATTAAATCCATCTaGGTAAGGGCAGGCTGGGGGTTGTTCCAAAATATGTTGATTGAC | + |
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Preference number: 1 (lower is better) Translates to: FGNLYLLTPILIKSI*VRAGWGLFQNMLID Trigger: GTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCAGATGGATTTAATTAATATTGGTGTAAGTAGATAAAGATTGCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 90 bp | ACTAAACCCAAGTCCTCTTCAAGAGCAACAAGTACTGTTAACCACTaGCCACTTCTCCAGCAGTCTTTTTGTTTCTTTAAATTAAACATT | + |
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Preference number: 1 (lower is better) Translates to: TKPKSSSRATSTVNH*PLLQQSFCFFKLNI Trigger: AATGTTTAATTTAAAGAAACAAAAAGACTGCTGGAGAAGTGGCCAGTGGTTAACAGTACTTGTTGCTCTTGAAGAGGACTTGGGTTTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTTGTCTCCATTTCCCCAGTGCTTGGATAACAAAATGCTCAACCAAGCTTGGCATCTCTTCAGGTTaGTCAGTGCTCAGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSCLHFPSAWITKCSTKLGISSG*SVLSFP Trigger: TGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCC...AAGCTTGGTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGGAGACAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CAA 90 bp | CAAAGGCCCAAGTGTCCCACCAACAGAAATTGGCATCTCTTCAGGTaGCTCAGTGCTCAGCTTCCCATCTCAATAAGCAAGACAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRPKCPTNRNWHLFR*LSAQLPISISKTIS Trigger: TGAAATTGTCTTGCTTATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTAGAAAAATACATTTCAAACCCCATCTTAGCTCTTCCGGAGGAGCATGCACTCAATTTCTCAGTCTaGTTCAGGGCCTACTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WVEKYISNPILALPEEHALNFSV*FRAYCC Trigger: ACAGCAGTAGGCCCTGAACCAGACTGAGAAATTGAG...TGCATGCTCCTCCGGAAGAGCTAAGATGGGGTTTGAAATGTATTTTTCTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGTAGATGTCTTAATTAAATCCATCTaGGTAAGGGCAGGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KESLSANGCQACSLLVDVLIKSI*VRAGWG Trigger: CCCCCAGCCTGCCCTTACCCAGATGGATTTAATTAA...GACATCTACGAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTTTGATGTGGACAGGGTaGGGGTGGTGGTGGTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSVSQTQSEFLQLHAYFLLMWTG*GWWWFQ Trigger: CTGGAACCACCACCACCCCCACCCTGTCCACATCAA...AAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCCTGCTTCAGCCTTTaGAGGGACTGCTCCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SEQCLSNSIRVFAIACLLSCFSL*RDCSFR Trigger: CCTGAAGGAGCAGTCCCTCCAAAGGCTGAAGCAGGA...AAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTGTCTCCATTTCCCCAGTGCTTGGATAACAAAATGCTCAACCAAGCTTATGATGGTGATGACCTaGGGTAAGGGACACAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SSCLHFPSAWITKCSTKLMMVMT*GKGHKV Trigger: TACTTTGTGTCCCTTACCTCAGGTCATCACCATCAT...AAGCTTGGTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGGAGACAAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CAA 90 bp | AAATCCATCTGGGTAAGGGCAGGCTGGGGGTTGTTCCAAAATATGTaGATTGACACAAGCAAATCACAATCTTTGCTGTGGCTTATTCTC | + |
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Preference number: 2 (lower is better) Translates to: KSIWVRAGWGLFQNM*IDTSKSQSLLWLIL Trigger: GAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCAGATGGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGTAGATGTCTCACAATCTTTGCTGTaGCTTATTCTCTCAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: KESLSANGCQACSLLVDVSQSLL*LILSDP Trigger: AGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGA...GACATCTACGAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTCTCTACAGACCCTTCTTTGCTaGGGACAAGGAATGGACTCG | + |
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Preference number: 2 (lower is better) Translates to: CLSNSIRVFAIACLLSSLQTLLC*GQGMDS Trigger: CGAGTCCATTCCTTGTCCTCAGCAAAGAAGGGTCTG...TAGAGAAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTGTCTCCATTTCCCCAGTGCTTGGATAACAAAATGCTCAACCAAGCTTGATACTGACATCACCTaGATGTTTCTTACCATGATG | + |
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Preference number: 2 (lower is better) Translates to: SSCLHFPSAWITKCSTKLDTDIT*MFLTMM Trigger: CATCATGGTAAGAAACATTCAGGTGATGTCAGTATC...AAGCTTGGTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGGAGACAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTTTTGCCTTCCAAGAGTGCTATACAGAGACTGACATTAGCCCTGTCAGGTTAAGATGGAGATACTaGCATCACCTGAATGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IAFAFQECYTETDISPVRLRWRY*HHLNVS Trigger: AGAAACATTCAGGTGATGTCAGTATCTCCATCTTAA...CCTGACAGGGCTAATGTCAGTCTCTGTATAGCACTCTTGGAAGGCAAAAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTTGTCTCCATTTCCCCAGTGCTTGGATAACAAAATGCTCAACCAAGCTTCCAAAACATTGCTTTTaGCTTCCAAGAGTGCTATAC | + |
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Preference number: 2 (lower is better) Translates to: SSCLHFPSAWITKCSTKLPKHCF*LPRVLY Trigger: GTATAGCACTCTTGGAAGGCAAAAGCAATGTTTTGG...AAGCTTGGTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGGAGACAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGGTTCCAGATATGAATaGGGTCTAGCTCCTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: FFEKESLSANGCQACSLLGSRYE*GLAPEI Trigger: GATTTCAGGAGCTAGACCCCATTCATATCTGGAACC...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTCTCTACTCAAGTATTCCTCCTaGTTCAGCCTTTGGAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CLSNSIRVFAIACLLSSLLKYSS*FSLWRD Trigger: GTCCCTCCAAAGGCTGAAGCAGGAGGAATACTTGAG...TAGAGAAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTCTCTAGCAAATCACAATCTTTaGTGTGGCTTATTCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLSNSIRVFAIACLLSSLANHNL*CGLFSQ Trigger: CTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGC...TAGAGAAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 72 bp | AAGGTCTTTCACTGGTCTAGAGCTCACCAGGGAGGCTaGGCTTGTTGGCCTCTGAGTTCCAGGGTTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KVFHWSRAHQGG*ACWPLSSRVPL Trigger: AAGAGGAACCCTGGAACTCAGAGGCCAACAAGCCCAGCCTCCCTGGTGAGCTCTAGACCAGTGAAAGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR GCA 72 bp | CTCAAGTATTCCTCCTGCTTCAGCCTTTGGAGGGACTaGTCCTTCAGGCTGCATCAGTGCACCCAGCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LKYSSCFSLWRD*SFRLHQCTQLL Trigger: TAAGAGCTGGGTGCACTGATGCAGCCTGAAGGAGCAGTCCCTCCAAAGGCTGAAGCAGGAGGAATACTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 72 bp | TCTCAGTCTGGTTCAGGGCCTACTGCTGTAATCAACTaGCTCCCCAGCAGAAACAGCCCTTTCTCCTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SQSGSGPTAVIN*LPSRNSPFSSH Trigger: GTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTAGGCCCTGAACCAGACTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 72 bp | CCCTCATGTGGTTTTCCTTGTAAAGCGTTATTGCCTTaGTGTGGACAGGGTGGGGGTGGTGGTGGTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PSCGFPCKALLP*CGQGGGGGGSR Trigger: TCTGGAACCACCACCACCCCCACCCTGTCCACATCAAGGCAATAACGCTTTACAAGGAAAACCACATGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 72 bp | AAGATCAGGAACTGTGATCTCCTGAGGACACGGGCATaGGGACACAGGCATGAGCATTGTAGTCGCAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: KIRNCDLLRTRA*GHRHEHCSRKG Trigger: ACCTTTGCGACTACAATGCTCATGCCTGTGTCCTCATGCCCGTGTCCTCAGGAGATCACAGTTCCTGATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR TCA 72 bp | CACATTCATTGTCACTCTGGTGAAGATCAGGAACTGTaGTCTCCTGAGGACACGGGCATGAGGACACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: HIHCHSGEDQEL*SPEDTGMRTQA Trigger: TGCCTGTGTCCTCATGCCCGTGTCCTCAGGAGATCACAGTTCCTGATCTTCACCAGAGTGACAATGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 72 bp | TGGGTGTGTGTGTGTGCGCGCGTGTGTGTGAATGTATaGAGAGGCAAGAAGATAGTTTTGGCTGTCATTCCC | + |
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Preference number: 3 (lower is better) Translates to: WVCVCARVCVNV*RGKKIVLAVIP Trigger: GGGAATGACAGCCAAAACTATCTTCTTGCCTCTCCATACATTCACACACACGCGCGCACACACACACACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR TCA 72 bp | AGCTCTGGATTTTCCCTTTCTAACAAAGAAACTGTGTaGGTGTGCATGGGTGTGTGTGTGTGCGCGCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSGFSLSNKETV*VCMGVCVCARV Trigger: CACACGCGCGCACACACACACACCCATGCACACTCACACAGTTTCTTTGTTAGAAAGGGAAAATCCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 72 bp | ATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATTaGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: ITQRPKCPTNRN*HLFRLLSAQLP Trigger: GGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR CAA 90 bp | ACATTCATTGTCACTCTGGTGAAGATCAGGAACTGTGATCTCCTGAGGACACGGCCATTTCCCCAGTGCTaGGATAACAAAATGCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: TFIVTLVKIRNCDLLRTRPFPQC*DNKMLN Trigger: GTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGG...CCGTGTCCTCAGGAGATCACAGTTCCTGATCTTCACCAGAGTGACAATGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 72 bp | AGAATCTTTCTATCACCAAGACTGGGCTTGAACTCCTaGTCTCAAGTATTCCTCCTGCTTCAGCCTTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: RIFLSPRLGLNS*SQVFLLLQPLE Trigger: CTCCAAAGGCTGAAGCAGGAGGAATACTTGAGACCAGGAGTTCAAGCCCAGTCTTGGTGATAGAAAGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR GCA 72 bp | CACCAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTaGTCAGCTTCCCATCTCAATAAGCAAGACAATTTC | + |
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Preference number: 3 (lower is better) Translates to: HQQKLASLQVAQ*SASHLNKQDNF Trigger: GAAATTGTCTTGCTTATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR CCA 72 bp | CAAAAGAAGGCATCAGATCCTCTGGAAGTGAAGTTATaGATGCCTGTAAGCTACCATTCGAGTTCTAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: QKKASDPLEVKL*MPVSYHSSSRN Trigger: GTTCCTAGAACTCGAATGGTAGCTTACAGGCATCCATAACTTCACTTCCAGAGGATCTGATGCCTTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR-3UTR CAA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATCAGAACTTCAGCCTTTaGGAATTTGTTTCTGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: QQKLASLQVAQCSASHLNQNFSL*EFVSVL Trigger: CAAAACAGAAACAAATTCCAAAAGGCTGAAGTTCTG...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| 3UTR TCA 72 bp | CTTTGCTGTGGCTTATTCTCTCAGACCCTTCTTTGCTaGGGACAAGGAATGGACTCGATAATAATTCTACAA | + |
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Preference number: 3 (lower is better) Translates to: LCCGLFSQTLLC*GQGMDSIIILQ Trigger: TTGTAGAATTATTATCGAGTCCATTCCTTGTCCTCAGCAAAGAAGGGTCTGAGAGAATAAGCCACAGCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR TCA 72 bp | TTTCACTGTTCGTGTCAAGCTTCCACTCTGAATTTCTaGGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: FHCSCQASTLNF*AVSLKLNQSFC Trigger: GCAAAAACTCTGATTGAGTTTGAGAGACACTGCTCAGAAATTCAGAGTGGAAGCTTGACACGAACAGTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 72 bp | ATGTTGATTGACACAAGCAAATCACAATCTTTGCTGTaGCTTATTCTCTCAGACCCTTCTTTGCTGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: MLIDTSKSQSLL*LILSDPSLLRT Trigger: TGTCCTCAGCAAAGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAATCAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| 3UTR CCA 72 bp | CCAATATTAATTAAATCCATCTGGGTAAGGGCAGGCTaGGGGTTGTTCCAAAATATGTTGATTGACACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PILIKSIWVRAG*GLFQNMLIDTS Trigger: GCTTGTGTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCAGATGGATTTAATTAATATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCAGTTCAGTTAAGGATTaGCACCCCAAAGTACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FFEKESLSANGCQACSLLSSVKD*HPKVQV Trigger: AACTTGTACTTTGGGGTGCAAATCCTTAACTGAACT...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR GCA 72 bp | AAATATGACCAAAACATTGCTTTTGCCTTCCAAGAGTaGTATACAGAGACTGACATTAGCCCTGTCAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KYDQNIAFAFQE*YTETDISPVRL Trigger: TAACCTGACAGGGCTAATGTCAGTCTCTGTATAGCACTCTTGGAAGGCAAAAGCAATGTTTTGGTCATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| 3UTR CCA 72 bp | AAGTCCTCTTCAAGAGCAACAAGTACTGTTAACCACTaGCCACTTCTCCAGCAGTCTTTTTGTTTCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSSSRATSTVNH*PLLQQSFCFFK Trigger: TTTAAAGAAACAAAAAGACTGCTGGAGAAGTGGCCAGTGGTTAACAGTACTTGTTGCTCTTGAAGAGGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| 3UTR CCA 72 bp | CAAGGACCTAGACATACTGTCAACAAGAACAAGATTTaGGTAGAAAAATACATTTCAAACCCCATCTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGPRHTVNKNKI*VEKYISNPILA Trigger: AGCTAAGATGGGGTTTGAAATGTATTTTTCTACCCAAATCTTGTTCTTGTTGACAGTATGTCTAGGTCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR CCA 72 bp | TTAAATTTTATTGTATATACATACCATGTATGTTCCTaGTACCCAAGGAGGTCAAAAGAAGGCATCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: LNFIVYTYHVCS*YPRRSKEGIRS Trigger: GGATCTGATGCCTTCTTTTGACCTCCTTGGGTACCAGGAACATACATGGTATGTATATACAATAAAATTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCATTGTCACTCTGGTGAAGATCAGGAACTGTGATCTCCTGAGGACACGGTCCGGTCCTCGATGGTaGCCACCCCGTTGGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFIVTLVKIRNCDLLRTRSGPRW*PPRWGP Trigger: CGGCCCCCAACGGGGTGGCCACCATCGAGGACCGGA...CCGTGTCCTCAGGAGATCACAGTTCCTGATCTTCACCAGAGTGACAATGAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAAAAATACATTTCAAACCCCATCTTAGCTCTTCCGGAGGAGCATGCATCCGGTCCTCGATGGTaGCCACCCCGTTGGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVEKYISNPILALPEEHASGPRW*PPRWGP Trigger: CGGCCCCCAACGGGGTGGCCACCATCGAGGACCGGA...TGCATGCTCCTCCGGAAGAGCTAAGATGGGGTTTGAAATGTATTTTTCTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATGGATCCGGTCCTCGATaGTGGCCACCCCGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQKLASLQVAQCSASHLNGSGPR*WPPRWG Trigger: CCCCCAACGGGGTGGCCACCATCGAGGACCGGATCC...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTTCTATCACCAAGACTGGGCTTGAACTCCTGGTCTCAAGTATTCCTCGGATCCGGTCCTCGATaGTGGCCACCCCGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIFLSPRLGLNSWSQVFLGSGPR*WPPRWG Trigger: CCCCCAACGGGGTGGCCACCATCGAGGACCGGATCC...GAGGAATACTTGAGACCAGGAGTTCAAGCCCAGTCTTGGTGATAGAAAGATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTTGCCTTCCAAGAGTGCTATACAGAGACTGACATTAGCCCTGTCAGGGCTGATGCTGCTGTGTaGACTGGGGCAGTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAFAFQECYTETDISPVRADAAV*TGAVGS Trigger: GGACCCAACTGCCCCAGTTCACACAGCAGCATCAGC...CCTGACAGGGCTAATGTCAGTCTCTGTATAGCACTCTTGGAAGGCAAAAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR TCA 90 bp | ACATTCATTGTCACTCTGGTGAAGATCAGGAACTGTGATCTCCTGAGGACACGGGGGACAGTTGCCTGCTaGTGCTGCTGTGTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFIVTLVKIRNCDLLRTRGTVAC*CCCVNW Trigger: CCAGTTCACACAGCAGCATCAGCAGGCAACTGTCCC...CCGTGTCCTCAGGAGATCACAGTTCCTGATCTTCACCAGAGTGACAATGAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGCTGATGCTGCTGTGTaGACTGGGGCAGTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFEKESLSANGCQACSLLADAAV*TGAVGS Trigger: GGACCCAACTGCCCCAGTTCACACAGCAGCATCAGC...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATAAGCAAGACAATTTCACAGGCATCGAGCCTTaGGTCCGTTTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQVAQCSASHLNKQDNFTGIEP*VRFLGC Trigger: GCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGT...GAAATTGTCTTGCTTATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTTCTATCACCAAGACTGGGCTTGAACTCCTGGTCTCAAGTATTCCTCGACAGAGGGGACAGTTaGCTGCTGATGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIFLSPRLGLNSWSQVFLDRGDS*LLMLLC Trigger: ACACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTC...GAGGAATACTTGAGACCAGGAGTTCAAGCCCAGTCTTGGTGATAGAAAGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR CAA 72 bp | AATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATaGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNTKAQVSHQQK*ASLQVAQCSAS Trigger: GGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGGGACAGTTGCCTGCTaGTGCTGCTGTGTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFEKESLSANGCQACSLLGTVAC*CCCVNW Trigger: CCAGTTCACACAGCAGCATCAGCAGGCAACTGTCCC...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGAATGTATGGAGAGGCAAGAAGATAGTTTTGGCTGTCATTCCCCAGCATCATCCCCTGATCTaGTCTGTCTCTCCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVNVWRGKKIVLAVIPQHHPLI*SVSPLF Trigger: GAAGAGTGGAGAGACAGAGCAGATCAGGGGATGATG...CTGGGGAATGACAGCCAAAACTATCTTCTTGCCTCTCCATACATTCACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGTAGATGTCCGTTTTCTTGGCTGCTaGTCTCAGGACGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KESLSANGCQACSLLVDVRFLGC*SQDESV Trigger: CACAGACTCGTCCTGAGAGCAGCAGCCAAGAAAACG...GACATCTACGAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATAAGCAAGACAATTTCGTCCGTTTTCTTGGCTaGTGCTCTCAGGACGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQVAQCSASHLNKQDNFVRFLG*CSQDES Trigger: AGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGAC...GAAATTGTCTTGCTTATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAAAAATACATTTCAAACCCCATCTTAGCTCTTCCGGAGGAGCATGCATCAGAACCATGGATGTaGAGGACAGGCATCGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVEKYISNPILALPEEHASEPWM*RTGIEP Trigger: AGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGA...TGCATGCTCCTCCGGAAGAGCTAAGATGGGGTTTGAAATGTATTTTTCTACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATTGGTCTTCAGAACCATaGATGTGCAGGACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QQKLASLQVAQCSASHLNWSSEP*MCRTGI Trigger: GATGCCTGTCCTGCACATCCATGGTTCTGAAGACCA...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCTGTAATCAACTGACTCCCCAGCAGAAACAGCCCTTTCTCCTCTCACGAGCTTTTCTTGAGCTGTaGCTAGATGGCCGGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YCCNQLTPQQKQPFLLSRAFLEL*LDGRNN Trigger: ATTATTCCGGCCATCTAGCCACAGCTCAAGAAAAGC...TCGTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACACAAGCAAATCACAATCTTTGCTGTGGCTTATTCTCTCAGACCCTTCTTGTCCCATCATCCCCTaGTCTGCTCTGTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDTSKSQSLLWLILSDPSCPIIP*SALSLH Trigger: GTGGAGAGACAGAGCAGATCAGGGGATGATGGGACA...AGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGAATGTATGGAGAGGCAAGAAGATAGTTTTGGCTGTCATTCCCCAGATGACACTGACAAGATaGTCAAGAGTCCCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVNVWRGKKIVLAVIPQMTLTR*SRVPRW Trigger: CCATCTGGGGACTCTTGATCATCTTGTCAGTGTCAT...CTGGGGAATGACAGCCAAAACTATCTTCTTGCCTCTCCATACATTCACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR GCA 90 bp | TATTTACCAAATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATTGGCATCTGACAGAGGGGACAGTTaGCTGCTGATGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLPNNTKAQVSHQQKLASDRGDS*LLMLLC Trigger: ACACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTC...AGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTATTTGGTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR GCA 90 bp | TACTGCTGTAATCAACTGACTCCCCAGCAGAAACAGCCCTTTCTCCTCTCACGAAGACAAAGGCTTTGTTaGAACAGAACAGAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCCNQLTPQQKQPFLLSRRQRLC*NRTEQR Trigger: TCTCTGCTCTGTTCTGTTGCAACAAAGCCTTTGTCT...TCGTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | ATTGACACAAGCAAATCACAATCTTTGCTGTGGCTTATTCTCTCAGACCCTTCTGTGAACTGGGGCAGTTaGGTCCTGGTTTGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IDTSKSQSLLWLILSDPSVNWGS*VLVCIE Trigger: CTCGATGCAAACCAGGACCCAACTGCCCCAGTTCAC...AGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | TATTTACCAAATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATTGGCATCTGTGAACTGGGGCAGTTaGGTCCTGGTTTGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPNNTKAQVSHQQKLASVNWGS*VLVCIE Trigger: CTCGATGCAAACCAGGACCCAACTGCCCCAGTTCAC...AGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTATTTGGTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | GATTTAACCATTCCCTCACACTTCCAGATAGGTGACAAGAAGTGGAAGTGTTTTTGCTGCTGTGTGAACTaGGGCAGTTGGGTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLTIPSHFQIGDKKWKCFCCCVN*GSWVLV Trigger: AACCAGGACCCAACTGCCCCAGTTCACACAGCAGCA...AAAACACTTCCACTTCTTGTCACCTATCTGGAAGTGTGAGGGAATGGTTAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGCAACACCCTCATGTGGTTTTCCTTGTAAAGCGTTATTGCCTTGATGTGATGACACTGACAAGATaGTCAAGAGTCCCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HKQHPHVVFLVKRYCLDVMTLTR*SRVPRW Trigger: CCATCTGGGGACTCTTGATCATCTTGTCAGTGTCAT...CACATCAAGGCAATAACGCTTTACAAGGAAAACCACATGAGGGTGTTGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | GATTTAACCATTCCCTCACACTTCCAGATAGGTGACAAGAAGTGGAAGTGTTTTTCAGAACCATGGATGTaGAGGACAGGCATCGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLTIPSHFQIGDKKWKCFSEPWM*RTGIEP Trigger: AGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGA...AAAACACTTCCACTTCTTGTCACCTATCTGGAAGTGTGAGGGAATGGTTAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTCCTCCCATTCATCACCAACCATAGAGCTCTCACTTCTTTATTTCCACGCTTTTCTTGAGCTGTaGCTAGATGGCCGGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PASSHSSPTIELSLLYFHAFLEL*LDGRNN Trigger: ATTATTCCGGCCATCTAGCCACAGCTCAAGAAAAGC...GTGGAAATAAAGAAGTGAGAGCTCTATGGTTGGTGATGAATGGGAGGAAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| 3UTR CAA 72 bp | TGGGTAAGGGCAGGCTGGGGGTTGTTCCAAAATATGTaGATTGACACAAGCAAATCACAATCTTTGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVRAGWGLFQNM*IDTSKSQSLLW Trigger: CCACAGCAAAGATTGTGATTTGCTTGTGTCAATCAACATATTTTGGAACAACCCCCAGCCTGCCCTTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR TCA 90 bp | CACATGTTTAACATAGTTCAGTTAAGGATTTGCACCCCAAAGTACAAGTTGTTGACAGGCATCGAGCCTTaGGTCCGTTTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HMFNIVQLRICTPKYKLLTGIEP*VRFLGC Trigger: GCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGT...CAACAACTTGTACTTTGGGGTGCAAATCCTTAACTGAACTATGTTAAACATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTTGCTGCTGTGTGAACTaGGGCAGTTGGGTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVSQTQSEFLQLHAYFLCCCVN*GSWVLV Trigger: AACCAGGACCCAACTGCCCCAGTTCACACAGCAGCA...AAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCTGGTCTTCAGAACCATaGATGTGCAGGACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FFEKESLSANGCQACSLLWSSEP*MCRTGI Trigger: GATGCCTGTCCTGCACATCCATGGTTCTGAAGACCA...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR CAA 72 bp | GTGTGTGTGAATGTATGGAGAGGCAAGAAGATAGTTTaGGCTGTCATTCCCCAGTTACCATCCACCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVNVWRGKKIV*AVIPQLPSTLF Trigger: AAACAAGGTGGATGGTAACTGGGGAATGACAGCCAAAACTATCTTCTTGCCTCTCCATACATTCACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| 3UTR CAA 72 bp | TGTTTGGTTGAGCACAGGGGAATAAAGAAGGCTTATTaGAGCTCCTGTGTGACACATTCATTGTCACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVEHRGIKKAY*SSCVTHSLSLW Trigger: CCAGAGTGACAATGAATGTGTCACACAGGAGCTCAAATAAGCCTTCTTTATTCCCCTGTGCTCAACCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | GATTTAACCATTCCCTCACACTTCCAGATAGGTGACAAGAAGTGGAAGTGTTTTTCAAGAGTCCCCAGATaGTCTTCAGAACCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLTIPSHFQIGDKKWKCFSRVPR*SSEPWM Trigger: CATCCATGGTTCTGAAGACCATCTGGGGACTCTTGA...AAAACACTTCCACTTCTTGTCACCTATCTGGAAGTGTGAGGGAATGGTTAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCTGTAATCAACTGACTCCCCAGCAGAAACAGCCCTTTCTCCTCTCACGATTTTTACAATTTGTGTaGTTCCAACCCAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: YCCNQLTPQQKQPFLLSRFLQFV*FQPKMM Trigger: CATCATCTTGGGTTGGAACCACACAAATTGTAAAAA...TCGTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | CACATGTTTAACATAGTTCAGTTAAGGATTTGCACCCCAAAGTACAAGTTGTTGCATCATCCCCTGATCTaGTCTGTCTCTCCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMFNIVQLRICTPKYKLLHHPLI*SVSPLF Trigger: GAAGAGTGGAGAGACAGAGCAGATCAGGGGATGATG...CAACAACTTGTACTTTGGGGTGCAAATCCTTAACTGAACTATGTTAAACATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTCTCTAGTCCGTTTTCTTGGCTaGTGCTCTCAGGACGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSNSIRVFAIACLLSSLVRFLG*CSQDES Trigger: AGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGAC...TAGAGAAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| 3UTR CAA 72 bp | CAATCTTTGCTGTGGCTTATTCTCTCAGACCCTTCTTaGCTGAGGACAAGGAATGGACTCGATAATAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLLWLILSDPS*LRTRNGLDNNS Trigger: AGAATTATTATCGAGTCCATTCCTTGTCCTCAGCAAAGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | CACATGTTTAACATAGTTCAGTTAAGGATTTGCACCCCAAAGTACAAGTTGTTGTGGTACTTTTCTGGCTaGAGTAACCCGGGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMFNIVQLRICTPKYKLLWYFSG*SNPGNS Trigger: GCTATTACCCGGGTTACTCCAGCCAGAAAAGTACCA...CAACAACTTGTACTTTGGGGTGCAAATCCTTAACTGAACTATGTTAAACATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTTCAAGAGTCCCCAGATaGTCTTCAGAACCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSQTQSEFLQLHAYFLSRVPR*SSEPWM Trigger: CATCCATGGTTCTGAAGACCATCTGGGGACTCTTGA...AAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR GCA 90 bp | ATTGACACAAGCAAATCACAATCTTTGCTGTGGCTTATTCTCTCAGACCCTTCTAACACATCTTCCAATTaGAATTTGTACTCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IDTSKSQSLLWLILSDPSNTSSN*NLYSEP Trigger: TGGTTCTGAGTACAAATTGCAATTGGAAGATGTGTT...AGAAGGGTCTGAGAGAATAAGCCACAGCAAAGATTGTGATTTGCTTGTGTCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CCA 90 bp | TATTTACCAAATAACACAAAGGCCCAAGTGTCCCACCAACAGAAATTGGCATCTTTTTTACAATTTGTGTaGTTCCAACCCAAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLPNNTKAQVSHQQKLASFLQFV*FQPKMM Trigger: CATCATCTTGGGTTGGAACCACACAAATTGTAAAAA...AGATGCCAATTTCTGTTGGTGGGACACTTGGGCCTTTGTGTTATTTGGTAAATA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| 3UTR CAA 72 bp | ATCTCAGAATGTACCAATCATAATAGTCATTTCTGTTaGGTTGAGCACAGGGGAATAAAGAAGGCTTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISECTNHNSHFC*VEHRGIKKAYL Trigger: CAAATAAGCCTTCTTTATTCCCCTGTGCTCAACCAAACAGAAATGACTATTATGATTGGTACATTCTGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| CDS GCA 90 bp | AGCGGTATGGACACTGTCCCGTTGACCCTGCTTCTGCTCCTCAGGTaGACGCTGACATCTGTCAGGTCCTCCACATGCTCCTCACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGMDTVPLTLLLLLR*TLTSVRSSTCSSLF Trigger: GAAGAGTGAGGAGCATGTGGAGGACCTGACAGATGTCAGCGTGCACCTGAGGAGCAGAAGCAGGGTCAACGGGACAGTGTCCATACCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS GCA 90 bp | AGAATAGGAGCAGAAGAATCTTCCGTGACCGACAGAGGGGACAGTTaGCTGCTGATGCTGCTGTGTGAACTGGGGCAGTTGGGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RIGAEESSVTDRGDS*LLMLLCELGQLGPG Trigger: ACCAGGACCCAACTGCCCCAGTTCACACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTCGGTCACGGAAGATTCTTCTGCTCCTATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CCA 90 bp | ACCATGGATGTGCAGGACAGGCATCGAGCCTTGAGTCCGTTTTCTTaGCTGCTGCTCTCAGGACGAGTCTGTGTCCCATCATCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TMDVQDRHRALSPFS*LLLSGRVCVPSSPD Trigger: ATCAGGGGATGATGGGACACAGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCACATCCATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS TCA 90 bp | AGATGGTCTTCAGAACCATGGATGTGCAGGACAGGCATCGAGCCTTaGGTCCGTTTTCTTGGCTGCTGCTCTCAGGACGAGTCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWSSEPWMCRTGIEP*VRFLGCCSQDESVS Trigger: GGACACAGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGAAGACCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS TCA 90 bp | GAGGCACCGCGCATGGAATTAAGTGTGCCATTACCCGCACGCCCATaGACCTGTCCTTCAGCACAATCCAGGACAGCAAGAAGACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAPRMELSVPLPARP*TCPSAQSRTARRQR Trigger: CCTTTGTCTTCTTGCTGTCCTGGATTGTGCTGAAGGACAGGTTCATGGGCGTGCGGGTAATGGCACACTTAATTCCATGCGCGGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS-3UTR CAA 90 bp | TACTGCTGTAATCAACTGACTCCCCAGCAGAAACAGCCCTTTCTCCTCTCACGACGACAGAGGGGACAGTaGCCTGCTGATGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YCCNQLTPQQKQPFLLSRRQRGQ*PADAAV Trigger: CACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTCG...TCGTGAGAGGAGAAAGGGCTGTTTCTGCTGGGGAGTCAGTTGATTACAGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS CCA 90 bp | GAGGCTGAGCCTACGGCAAATGCCACACCGATGATGGAATCAGCGTaGAAATTATCCGCATACGCCATCATGACAATGCCCGTAATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAEPTANATPMMESA*KLSAYAIMTMPVIA Trigger: GGCAATTACGGGCATTGTCATGATGGCGTATGCGGATAATTTCCACGCTGATTCCATCATCGGTGTGGCATTTGCCGTAGGCTCAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATCGACAGAGGGGACAGTaGCCTGCTGATGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QQKLASLQVAQCSASHLNRQRGQ*PADAAV Trigger: CACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTCG...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| CDS GCA 90 bp | CTTCTGCTCCTCAGGTGCACGCTGACATCTGTCAGGTCCTCCACATaGTCCTCACTCTTCTTCTCCTTCAGGCTGTTGATAAATCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLRCTLTSVRSST*SSLFFSFRLLINLS Trigger: ACTGAGATTTATCAACAGCCTGAAGGAGAAGAAGAGTGAGGAGCATGTGGAGGACCTGACAGATGTCAGCGTGCACCTGAGGAGCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS TCA 90 bp | TGTCTCTCCACTCTTCGACCACAAACTCCAGAGGATCCTCGGCTCTaGAGTTCAAGAATAGGAGCAGAAGAATCTTCCGTGACCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLSTLRPQTPEDPRL*SSRIGAEESSVTDR Trigger: TCTGTCGGTCACGGAAGATTCTTCTGCTCCTATTCTTGAACTTCAGAGCCGAGGATCCTCTGGAGTTTGTGGTCGAAGAGTGGAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS GCA 90 bp | AGCGTGGAAATTATCCGCATACGCCATCATGACAATGCCCGTAATTaGCATTATTGCTGCGACAATCCGCACGCCCATGAACCTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVEIIRIRHHDNARN*HYCCDNPHAHEPVL Trigger: AAGGACAGGTTCATGGGCGTGCGGATTGTCGCAGCAATAATGGCAATTACGGGCATTGTCATGATGGCGTATGCGGATAATTTCCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATTGTGAACTGGGGCAGTaGGGTCCTGGTTTGCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: QQKLASLQVAQCSASHLNCELGQ*GPGLHR Trigger: TCGATGCAAACCAGGACCCAACTGCCCCAGTTCACA...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| CDS GCA 90 bp | ATGATGATGGTGGCAGCCAGGCGGACTACATTGAATATTACTTCTTaGTTAAGGAGATCTACAGCTGCGTTTCCAGGGACGCTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: MMMVAARRTTLNITS*LRRSTAAFPGTLST Trigger: AGTGCTCAGCGTCCCTGGAAACGCAGCTGTAGATCTCCTTAAGCAAGAAGTAATATTCAATGTAGTCCGCCTGGCTGCCACCATCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS-3UTR CAA 90 bp | TCCTCTTGTCTCCATTTCCCCAGTGCTTGGATAACAAAATGCTCAACCAAGCTTGACAGGCATCGAGCCTaGAGTCCGTTTTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSCLHFPSAWITKCSTKLDRHRA*SPFSWL Trigger: CAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTC...AAGCTTGGTTGAGCATTTTGTTATCCAAGCACTGGGGAAATGGAGACAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
||
| CDS TCA 90 bp | CAGAAACATCTTAAACAGAACCTTATACAGTGCAGATGTGGAGGCTaGGCCTACGGCAAATGCCACACCGATGATGGAATCAGCGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QKHLKQNLIQCRCGG*AYGKCHTDDGISVE Trigger: TTCCACGCTGATTCCATCATCGGTGTGGCATTTGCCGTAGGCTCAGCCTCCACATCTGCACTGTATAAGGTTCTGTTTAAGATGTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS GCA 90 bp | TGTCCTTCAGCACAATCCAGGACAGCAAGAAGACAAAGGCTTTGTTaGAACAGAACAGAGCAGAGACATCAGTGGCCGTCAGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CPSAQSRTARRQRLC*NRTEQRHQWPSASL Trigger: TAAAGAAGCTGACGGCCACTGATGTCTCTGCTCTGTTCTGTTGCAACAAAGCCTTTGTCTTCTTGCTGTCCTGGATTGTGCTGAAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000138884.8 |
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| CDS TCA 90 bp | TTACAATTTGTGTGGTTCCAACCCAAGATGATGACACTGACAAGATaGTCAAGAGTCCCCAGATGGTCTTCAGAACCATGGATGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQFVWFQPKMMTLTR*SRVPRWSSEPWMCR Trigger: CCTGCACATCCATGGTTCTGAAGACCATCTGGGGACTCTTGATCATCTTGTCAGTGTCATCATCTTGGGTTGGAACCACACAAATTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTGTGAACTGGGGCAGTaGGGTCCTGGTTTGCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: SEQCLSNSIRVFAIACLLCELGQ*GPGLHR Trigger: TCGATGCAAACCAGGACCCAACTGCCCCAGTTCACA...AAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | TCTGAGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTCTTGAGTCCGTTTTCTaGGCTGCTGCTCTCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SEQCLSNSIRVFAIACLLLESVF*AAALRT Trigger: CGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAG...AAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | AGCAGTGTCTCTCAAACTCAATCAGAGTTTTTGCAATTGCATGCTTACTTTCTTGACAGGCATCGAGCCTaGAGTCCGTTTTCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSVSQTQSEFLQLHAYFLDRHRA*SPFSWL Trigger: CAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTC...AAGAAAGTAAGCATGCAATTGCAAAAACTCTGATTGAGTTTGAGAGACACTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGTAGATGTCAAGACAAAGGCTTTGTaGCAACAGAACAGAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KESLSANGCQACSLLVDVKTKAL*QQNRAE Trigger: CTCTGCTCTGTTCTGTTGCAACAAAGCCTTTGTCTT...GACATCTACGAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | AAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCGTAGATGTCTCTTCCAATTGCAATTaGTACTCAGAACCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KESLSANGCQACSLLVDVSSNCN*YSEPVG Trigger: CCCCACTGGTTCTGAGTACAAATTGCAATTGGAAGA...GACATCTACGAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | CACAAGCAACACCCTCATGTGGTTTTCCTTGTAAAGCGTTATTGCCTTGATGTGAAGAAGACAAAGGCTTaGTTGCAACAGAACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HKQHPHVVFLVKRYCLDVKKTKA*LQQNRA Trigger: TGCTCTGTTCTGTTGCAACAAAGCCTTTGTCTTCTT...CACATCAAGGCAATAACGCTTTACAAGGAAAACCACATGAGGGTGTTGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS-3UTR CAA 90 bp | CAACAGAAATTGGCATCTCTTCAGGTTGCTCAGTGCTCAGCTTCCCATCTCAATAGTGATTTTTACAATTaGTGTGGTTCCAACCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QQKLASLQVAQCSASHLNSDFYN*CGSNPR Trigger: TCTTGGGTTGGAACCACACAAATTGTAAAAATCACT...ATTGAGATGGGAAGCTGAGCACTGAGCAACCTGAAGAGATGCCAATTTCTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146164.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGAAAAAGAAAGCCTTTCAGCCAATGGTTGTCAGGCATGTTCTCTTCTCAGTGATTTTTACAATTaGTGTGGTTCCAACCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFEKESLSANGCQACSLLSDFYN*CGSNPR Trigger: TCTTGGGTTGGAACCACACAAATTGTAAAAATCACT...GAGAAGAGAACATGCCTGACAACCATTGGCTGAAAGGCTTTCTTTTTCAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
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| CDS GCA 72 bp | GACACTGTCCCGTTGACCCTGCTTCTGCTCCTCAGGTaGACGCTGACATCTGTCAGGTCCTCCACATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DTVPLTLLLLLR*TLTSVRSSTCS Trigger: GGAGCATGTGGAGGACCTGACAGATGTCAGCGTGCACCTGAGGAGCAGAAGCAGGGTCAACGGGACAGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS TCA 72 bp | CGACAGAGGGGACAGTTGCCTGCTGATGCTGCTGTGTaGACTGGGGCAGTTGGGTCCTGGTTTGCATCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RQRGQLPADAAV*TGAVGSWFASS Trigger: ACTCGATGCAAACCAGGACCCAACTGCCCCAGTTCACACAGCAGCATCAGCAGGCAACTGTCCCCTCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CCA 72 bp | GTGCAGGACAGGCATCGAGCCTTGAGTCCGTTTTCTTaGCTGCTGCTCTCAGGACGAGTCTGTGTCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VQDRHRALSPFS*LLLSGRVCVPS Trigger: TGATGGGACACAGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS TCA 72 bp | TCAGAACCATGGATGTGCAGGACAGGCATCGAGCCTTaGGTCCGTTTTCTTGGCTGCTGCTCTCAGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: SEPWMCRTGIEP*VRFLGCCSQDE Trigger: CTCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CAA 90 bp | CAGATGGTCTTCAGAACCATGGATGTGCAGGACAGGCATCGAGCCTaGAGTCCGTTTTCTTGGCTGCTGCTCTCAGGACGAGTCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QMVFRTMDVQDRHRA*SPFSWLLLSGRVCV Trigger: GACACAGACTCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGAAGACCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CAA 72 bp | TTCAGAACCATGGATGTGCAGGACAGGCATCGAGCCTaGAGTCCGTTTTCTTGGCTGCTGCTCTCAGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: FRTMDVQDRHRA*SPFSWLLLSGR Trigger: TCGTCCTGAGAGCAGCAGCCAAGAAAACGGACTCAAGGCTCGATGCCTGTCCTGCACATCCATGGTTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CAA 72 bp | CAGGGCAGCGCTGCGAAGGAGGACCAGTGCTCCACTTaGGTGAAATACAGGATGATGGGAGTGAAGGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QGSAAKEDQCST*VKYRMMGVKEI Trigger: TATCTCCTTCACTCCCATCATCCTGTATTTCACCAAAGTGGAGCACTGGTCCTCCTTCGCAGCGCTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS CAA 90 bp | TGCCTGCTGATGCTGCTGTGTGAACTGGGGCAGTTGGGTCCTGGTTaGCATCGAGTAACTGATGATCTGGTGGTACTTTTCTGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CLLMLLCELGQLGPG*HRVTDDLVVLFWLE Trigger: CTCCAGCCAGAAAAGTACCACCAGATCATCAGTTACTCGATGCAAACCAGGACCCAACTGCCCCAGTTCACACAGCAGCATCAGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CAA 90 bp | AGAGGGGACAGTTGCCTGCTGATGCTGCTGTGTGAACTGGGGCAGTaGGGTCCTGGTTTGCATCGAGTAACTGATGATCTGGTGGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: RGDSCLLMLLCELGQ*GPGLHRVTDDLVVL Trigger: AAGTACCACCAGATCATCAGTTACTCGATGCAAACCAGGACCCAACTGCCCCAGTTCACACAGCAGCATCAGCAGGCAACTGTCCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS TCA 72 bp | ATGTGGAGGCTGAGCCTACGGCAAATGCCACACCGATaGTGGAATCAGCGTGGAAATTATCCGCATACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MWRLSLRQMPHR*WNQRGNYPHTP Trigger: TGGCGTATGCGGATAATTTCCACGCTGATTCCATCATCGGTGTGGCATTTGCCGTAGGCTCAGCCTCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS TCA 72 bp | CGCATGGAATTAAGTGTGCCATTACCCGCACGCCCATaGACCTGTCCTTCAGCACAATCCAGGACAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RMELSVPLPARP*TCPSAQSRTAR Trigger: TCTTGCTGTCCTGGATTGTGCTGAAGGACAGGTTCATGGGCGTGCGGGTAATGGCACACTTAATTCCATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123534.2 |
||
| CDS GCA 72 bp | CGCCATCATGACAATGCCCGTAATTGCCATTATTGCTaGGACAATCCGCACGCCCATGAACCTGTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHHDNARNCHYC*DNPHAHEPVLQ Trigger: CTGAAGGACAGGTTCATGGGCGTGCGGATTGTCGCAGCAATAATGGCAATTACGGGCATTGTCATGATGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS GCA 72 bp | CTCAGGTGCACGCTGACATCTGTCAGGTCCTCCACATaGTCCTCACTCTTCTTCTCCTTCAGGCTGTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LRCTLTSVRSST*SSLFFSFRLLI Trigger: TATCAACAGCCTGAAGGAGAAGAAGAGTGAGGAGCATGTGGAGGACCTGACAGATGTCAGCGTGCACCTGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS CAA 72 bp | AGTTGCCTGCTGATGCTGCTGTGTGAACTGGGGCAGTaGGGTCCTGGTTTGCATCGAGTAACTGATGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCLLMLLCELGQ*GPGLHRVTDDL Trigger: CAGATCATCAGTTACTCGATGCAAACCAGGACCCAACTGCCCCAGTTCACACAGCAGCATCAGCAGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
||
| CDS CAA 72 bp | GGGTATGTCAGTACCACTCCAACATTGACCAGGATGTaGAATGCTAGCCATAGTCCCGCCATCCCACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GYVSTTPTLTRM*NASHSPAIPQR Trigger: CCTCTGTGGGATGGCGGGACTATGGCTAGCATTCAACATCCTGGTCAATGTTGGAGTGGTACTGACATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS CAA 90 bp | GTCCCAATGGAGATGAGGATTGGGTATGTCAGTACCACTCCAACATaGACCAGGATGTTGAATGCTAGCCATAGTCCCGCCATCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VPMEMRIGYVSTTPT*TRMLNASHSPAIPQ Trigger: CTGTGGGATGGCGGGACTATGGCTAGCATTCAACATCCTGGTCAATGTTGGAGTGGTACTGACATACCCAATCCTCATCTCCATTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS CCA 72 bp | CCTACGGCAAATGCCACACCGATGATGGAATCAGCGTaGAAATTATCCGCATACGCCATCATGACAATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTANATPMMESA*KLSAYAIMTMP Trigger: GGGCATTGTCATGATGGCGTATGCGGATAATTTCCACGCTGATTCCATCATCGGTGTGGCATTTGCCGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS CCA 72 bp | AGGGACGCTGAGCACTGTCCCAATGGAGATGAGGATTaGGTATGTCAGTACCACTCCAACATTGACCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RDAEHCPNGDED*VCQYHSNIDQD Trigger: ATCCTGGTCAATGTTGGAGTGGTACTGACATACCCAATCCTCATCTCCATTGGGACAGTGCTCAGCGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
||
| CDS CAA 90 bp | AACCTGTCCTTCAGCACAATCCAGGACAGCAAGAAGACAAAGGCTTaGTTGCAACAGAACAGAGCAGAGACATCAGTGGCCGTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NLSFSTIQDSKKTKA*LQQNRAETSVAVSF Trigger: GAAGCTGACGGCCACTGATGTCTCTGCTCTGTTCTGTTGCAACAAAGCCTTTGTCTTCTTGCTGTCCTGGATTGTGCTGAAGGACAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000138884.8 |
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| CDS CAA 90 bp | GATGATGATGGTGGCAGCCAGGCGGACTACATTGAATATTACTTCTaGCTTAAGGAGATCTACAGCTGCGTTTCCAGGGACGCTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: DDDGGSQADYIEYYF*LKEIYSCVSRDAEH Trigger: GTGCTCAGCGTCCCTGGAAACGCAGCTGTAGATCTCCTTAAGCAAGAAGTAATATTCAATGTAGTCCGCCTGGCTGCCACCATCATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS CAA 90 bp | GTCAGGTCCTCCACATGCTCCTCACTCTTCTTCTCCTTCAGGCTGTaGATAAATCTCAGTGTAATTTCATCCCACTCCTCCGGCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VRSSTCSSLFFSFRL*INLSVISSHSSGSS Trigger: GCTACTGCCGGAGGAGTGGGATGAAATTACACTGAGATTTATCAACAGCCTGAAGGAGAAGAAGAGTGAGGAGCATGTGGAGGACCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS GCA 72 bp | ATACGCCATCATGACAATGCCCGTAATTGCCATTATTaGTGCGACAATCCGCACGCCCATGAACCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IRHHDNARNCHY*CDNPHAHEPVL Trigger: AAGGACAGGTTCATGGGCGTGCGGATTGTCGCAGCAATAATGGCAATTACGGGCATTGTCATGATGGCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS CAA 72 bp | ATGCTGCTGTGTGAACTGGGGCAGTTGGGTCCTGGTTaGCATCGAGTAACTGATGATCTGGTGGTACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: MLLCELGQLGPG*HRVTDDLVVLF Trigger: GAAAAGTACCACCAGATCATCAGTTACTCGATGCAAACCAGGACCCAACTGCCCCAGTTCACACAGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS CAA 72 bp | GAGATGAGGATTGGGTATGTCAGTACCACTCCAACATaGACCAGGATGTTGAATGCTAGCCATAGTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: EMRIGYVSTTPT*TRMLNASHSPA Trigger: GGCGGGACTATGGCTAGCATTCAACATCCTGGTCAATGTTGGAGTGGTACTGACATACCCAATCCTCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS TCA 72 bp | ACTCTTCGACCACAAACTCCAGAGGATCCTCGGCTCTaGAGTTCAAGAATAGGAGCAGAAGAATCTTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: TLRPQTPEDPRL*SSRIGAEESSV Trigger: CACGGAAGATTCTTCTGCTCCTATTCTTGAACTTCAGAGCCGAGGATCCTCTGGAGTTTGTGGTCGAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074368.11 ENSMUST00000123534.2 ENSMUST00000146164.2 |
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| CDS TCA 72 bp | CTTAAACAGAACCTTATACAGTGCAGATGTGGAGGCTaGGCCTACGGCAAATGCCACACCGATGATGGAATC | + |
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Preference number: 6 (lower is better) Translates to: LKQNLIQCRCGG*AYGKCHTDDGI Trigger: GATTCCATCATCGGTGTGGCATTTGCCGTAGGCTCAGCCTCCACATCTGCACTGTATAAGGTTCTGTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS GCA 72 bp | ATTATCCGCATACGCCATCATGACAATGCCCGTAATTaGCATTATTGCTGCGACAATCCGCACGCCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: IIRIRHHDNARN*HYCCDNPHAHE Trigger: TTCATGGGCGTGCGGATTGTCGCAGCAATAATGGCAATTACGGGCATTGTCATGATGGCGTATGCGGATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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| CDS CAA 90 bp | AGAAACCCGATACAGATGATGATGGTGGCAGCCAGGCGGACTACATaGAATATTACTTCTTGCTTAAGGAGATCTACAGCTGCGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RNPIQMMMVAARRTT*NITSCLRRSTAAFP Trigger: TGGAAACGCAGCTGTAGATCTCCTTAAGCAAGAAGTAATATTCAATGTAGTCCGCCTGGCTGCCACCATCATCATCTGTATCGGGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074368.11 ENSMUST00000138884.8 |
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