Pregenerated sensors for SLC35F3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057060Ensembl transcript IDs: ENSMUST00000108759.3, ENSMUST00000238386.2, ENSMUST00000238518.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTGAAAGCCACCAGCCGTCCCTCCCACACAGTGCACCTGCTGTaGATGTCACACACCGCCAACCACCCTCCAAATACACTGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: EVKATSRPSHTVHLL*MSHTANHPPNTLAT Trigger: AGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGGTGGCTTTCACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR TCA 90 bp | AAGAGGCAGAGCCTTTGCCCTGGCTTGTCCAGCTTGCCTGTCCTCTaGAGAGACCGACACAAGGCTCATTTTACCTCGCTTTACATTCAT | + |
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Preference number: 1 (lower is better) Translates to: KRQSLCPGLSSLPVL*RDRHKAHFTSLYIH Trigger: ATGAATGTAAAGCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGCAAAGGCTCTGCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR TCA 90 bp | AGGCTTACAGACTCAGTAAATAATGTTTCAGTCTTGGTCTGGAAGTaGAAGCCACCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: RLTDSVNNVSVLVWK*KPPAVPPTQCTCCA Trigger: TGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGGTGGCTTTCACTTCCAGACCAAGACTGAAACATTATTTACTGAGTCTGTAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR TCA 90 bp | TACTGCAGTTACCAAAACTGTACATGTATGTACACCTCACCCAACTaGGGTTCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGG | + |
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Preference number: 1 (lower is better) Translates to: YCSYQNCTCMYTSPN*GSSIRNRPQKHYHG Trigger: CCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGAACCTCAGTTGGGTGAGGTGTACATACATGTACAGTTTTGGTAACTGCAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR CCA 90 bp | TTTCTCATCTGTTTTGAATCGGTACCCTTAGTGGAAGGTCTGACGTaGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: FLICFESVPLVEGLT*KSASKLDMPINTVE Trigger: TTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCTTCCACTAAGGGTACCGATTCAAAACAGATGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCCTGTTTTCTATCATGTaGCCCAGCACAGGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PAVPPTQCTCCACHTPPTLFSIM*PSTGLS Trigger: GGACAGGCCTGTGCTGGGTCACATGATAGAAAACAG...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCACCTGCTGTGCATGTCACACACCGCCAACCACCCTCCAAATACACTGGCCTGTTTTCTATCATGTaGCCCAGCACAGGCCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SAPAVHVTHRQPPSKYTGLFSIM*PSTGLS Trigger: GGACAGGCCTGTGCTGGGTCACATGATAGAAAACAG...GCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGACATGCACAGCAGGTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACACACCGCCAACCACCCTCCAAATACACTGGCCACTGGCTTTGTCACGTTTGCTGTAGAAGGCACTaGGTTCTCCTCATGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VTHRQPPSKYTGHWLCHVCCRRH*VLLMVL Trigger: CAAGACCATGAGGAGAACTCAGTGCCTTCTACAGCA...AACGTGACAAAGCCAGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACACACCGCCAACCACCCTCCAAATACACTGGCCACTGGCTTTGTCACGTTATAAGACGGCGCCAGTaGCATATAATGTCACCTCGC | + |
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Preference number: 2 (lower is better) Translates to: VTHRQPPSKYTGHWLCHVIRRRQ*HIMSPR Trigger: GCGAGGTGACATTATATGTCACTGGCGCCGTCTTAT...AACGTGACAAAGCCAGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTGTGGAAGGTCTGACGTaGAAAAGTGCAAGCAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: ALACPACLSSEETDTRLIVEGLT*KSASKL Trigger: CAATTTGCTTGCACTTTTCCACGTCAGACCTTCCAC...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTTTTCTCATCTGTTTTaGATCGGTACCCTTAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TRPARSEFCFLSCDPAQAFSHLF*IGTLSG Trigger: TCCACTAAGGGTACCGATTCAAAACAGATGAGAAAA...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTTACCTCGCTCATTTAAGAAGCGCTaGGAGGTTCTTTTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: CPACLSSEETDTRLILPRSFKKR*EVLFSS Trigger: AGATGAGAAAAGAACCTCTCAGCGCTTCTTAAATGA...GCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTACCGTAGAACTTACTaGAGTTACCAAAACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: TRPARSEFCFLSCDPAQAYRRTY*SYQNCT Trigger: TGTACAGTTTTGGTAACTGCAGTAAGTTCTACGGTA...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACTCTGACGTGGAAAAGTaGAAGCAAATTGGACATGCC | + |
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Preference number: 2 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHSDVEK*KQIGHA Trigger: GGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGA...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCTACACCTCACCCAACTaGGGTTCCTCCATCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SASKLDMPINTVELTAVTYTSPN*GSSIRN Trigger: ATTCCTGATGGAGGAACCTCAGTTGGGTGAGGTGTA...GGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGTTTTCTCATCTGTTTTaGATCGGTACCCTTAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVFSHLF*IGTLSG Trigger: TCCACTAAGGGTACCGATTCAAAACAGATGAGAAAA...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACTACACCTCACCCAACTaGGGTTCCTCCATCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: KCKQIGHANKYRRTYCSYYTSPN*GSSIRN Trigger: ATTCCTGATGGAGGAACCTCAGTTGGGTGAGGTGTA...GTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR TCA 72 bp | AGCCTTTGCCCTGGCTTGTCCAGCTTGCCTGTCCTCTaGAGAGACCGACACAAGGCTCATTTTACCTCGCTT | + |
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Preference number: 3 (lower is better) Translates to: SLCPGLSSLPVL*RDRHKAHFTSL Trigger: AAGCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGCAAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGAGCCTTTGCCCTGGCTaGTCCAGCTTGCCTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVTYNVTSLHIGQRCCRRSLCPG*SSLPVL Trigger: GAGGACAGGCAAGCTGGACAAGCCAGGGCAAAGGCT...CCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAATTATAAGACGGCGCCAGTGACATATAATGTCACCTCGCTTCACATAGGAAGCCTTTGCCCTGGCTaGTCCAGCTTGCCTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNYKTAPVTYNVTSLHIGSLCPG*SSLPVL Trigger: GAGGACAGGCAAGCTGGACAAGCCAGGGCAAAGGCT...TCCTATGTGAAGCGAGGTGACATTATATGTCACTGGCGCCGTCTTATAATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTAAAAGTGCAAGCAAATaGGACATGCCAATAAATACC | + |
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Preference number: 3 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPKSASK*DMPINT Trigger: GGTATTTATTGGCATGTCCAATTTGCTTGCACTTTT...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CAA 90 bp | TCATGTGACCCAGCACAGGCCTGTCCTCCGTTTATCTTCATGTCATTATCCTTTCAATGTCACTTTCAATaGCTAAGAGGCAGAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: SCDPAQACPPFIFMSLSFQCHFQ*LRGRAF Trigger: AAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTG...AAAGGATAATGACATGAAGATAAACGGAGGACAGGCCTGTGCTGGGTCACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR-3UTR CAA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACAAAAGTGCAAGCAAATaGGACATGCCAATAAATACC | + |
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Preference number: 3 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHKSASK*DMPINT Trigger: GGTATTTATTGGCATGTCCAATTTGCTTGCACTTTT...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR TCA 72 bp | TACCAAAACTGTACATGTATGTACACCTCACCCAACTaGGGTTCCTCCATCAGGAATAGACCTCAAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: YQNCTCMYTSPN*GSSIRNRPQKH Trigger: ATGTTTTTGAGGTCTATTCCTGATGGAGGAACCTCAGTTGGGTGAGGTGTACATACATGTACAGTTTTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR CCA 72 bp | TGTTTTGAATCGGTACCCTTAGTGGAAGGTCTGACGTaGAAAAGTGCAAGCAAATTGGACATGCCAATAAAT | + |
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Preference number: 3 (lower is better) Translates to: CFESVPLVEGLT*KSASKLDMPIN Trigger: ATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCTTCCACTAAGGGTACCGATTCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| 3UTR GCA 72 bp | CAAATTGGACATGCCAATAAATACCGTAGAACTTACTaGAGTTACCAAAACTGTACATGTATGTACACCTCA | + |
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Preference number: 3 (lower is better) Translates to: QIGHANKYRRTY*SYQNCTCMYTS Trigger: TGAGGTGTACATACATGTACAGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCGACTGTTGCAGGCGCTaGGCGGGGCCACCCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TRPARSEFCFLSCDPAQADCCRR*AGPPWP Trigger: CGGCCAGGGTGGCCCCGCTCAGCGCCTGCAACAGTC...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108759.3 |
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| CDS-3UTR CCA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCCATTCCTTTTGTAGCTaGTCGCCCAGGGCTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PAVPPTQCTCCACHTPPTHSFCS*SPRAGS Trigger: GCTACCAGCCCTGGGCGACCAGCTACAAAAGGAATG...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238386.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCAACCTTGTAAAGGGCTaGCATGGAAGCAGAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PAVPPTQCTCCACHTPPTNLVKG*HGSRAH Trigger: GTGGGCTCTGCTTCCATGTCAGCCCTTTACAAGGTT...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | TGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTTACCTCGCCGGGCTGACGTCCGGTaGCCTCCTCATGCCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: CPACLSSEETDTRLILPRRADVR*PPHANS Trigger: GCTGTTGGCATGAGGAGGTCACCGGACGTCAGCCCG...GCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS-3UTR GCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCATGGGCGGGCTCTTCTaGTCCTGCTCTGGGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: TRPARSEFCFLSCDPAQAMGGLF*SCSGDP Trigger: CGGGTCCCCAGAGCAGGAGCAGAAGAGCCCGCCCAT...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR GCA 90 bp | TGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTTACCTCGCATGGGCGGGCTCTTCTaGTCCTGCTCTGGGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: CPACLSSEETDTRLILPRMGGLF*SCSGDP Trigger: CGGGTCCCCAGAGCAGGAGCAGAAGAGCCCGCCCAT...GCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CCA 90 bp | GTCACACACCGCCAACCACCCTCCAAATACACTGGCCACTGGCTTTGTCACGTTCCGCTTCTCCGAACTTaGCGCTGCCCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTHRQPPSKYTGHWLCHVPLLRT*RCPAAA Trigger: AGCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGG...AACGTGACAAAGCCAGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCCCACCGGTCCACTGGTaGGATCCTCCACAGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TRPARSEFCFLSCDPAQAPPVHW*DPPQSE Trigger: CTCGCTCTGTGGAGGATCTCACCAGTGGACCGGTGG...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR GCA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTGTCCCCGCTGCTCTCTaGTGTCTCCTCCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALACPACLSSEETDTRLIVPAAL*CLLLLP Trigger: AGGAAGAAGGAGGAGACAGCAGAGAGCAGCGGGGAC...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCCCCTTCCACTTTGGTaGGGGTCAGGACCGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPPLPLW*GSGPDC Trigger: ACAGTCCGGTCCTGACCCTCACCAAAGTGGAAGGGG...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108759.3 |
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| CDS-3UTR GCA 90 bp | AGTGCACCTGCTGTGCATGTCACACACCGCCAACCACCCTCCAAATACACTGGCCCGGTGACCTCCTCATaGCAACAGCAATGCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SAPAVHVTHRQPPSKYTGPVTSS*QQQCSW Trigger: CCAAGAGCATTGCTGTTGGCATGAGGAGGTCACCGG...GCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGACATGCACAGCAGGTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCCATTTACAGGTACACTaGGGACAATTCCAAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: PAVPPTQCTCCACHTPPTHLQVH*GQFQET Trigger: TGTCTCTTGGAATTGTCCTCAGTGTACCTGTAAATG...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | CAGTGCACAATGTCACTTTCAATTGCTAAGAGGCAGAGCCTTTGCCCTGGCTTGCCACCGGTCCACTGGTaGGATCCTCCACAGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QCTMSLSIAKRQSLCPGLPPVHW*DPPQSE Trigger: CTCGCTCTGTGGAGGATCTCACCAGTGGACCGGTGG...CAAGCCAGGGCAAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTGTGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACAGTCTCCGCGGGCTaGCGTCCGGTGACCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVTVSAG*RPVTSS Trigger: TGAGGAGGTCACCGGACGTCAGCCCGCGGAGACTGT...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS-3UTR CCA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCAATGCTCTTGGTCCTaGAAGCGCCGCCGGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPQCSWS*KRRRET Trigger: AGTTTCCCGGCGGCGCTTCCAGGACCAAGAGCATTG...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGGCTCCTCGATGGATGTaGGTCCCACCGGTCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVAPRWM*VPPVHW Trigger: CCAGTGGACCGGTGGGACTCACATCCATCGAGGAGC...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCCAGAGTTCATGGGCGGGCTCTTCTaGTCCTGCTCTGGGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: SSIRNRPQKHYHGCIPEFMGGLF*SCSGDP Trigger: CGGGTCCCCAGAGCAGGAGCAGAAGAGCCCGCCCAT...GAACTCTGGGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR TCA 90 bp | TGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTTACCTCGCCGGCATAGGTCATCATaGCAATGCCAGCGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPACLSSEETDTRLILPRRHRSS*QCQRWQ Trigger: TTGCCATCGCTGGCATTGTCATGATGACCTATGCCG...GCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTTACCTCGCTGCCCAGCAGCAGCTTaGACAGAACCTTGTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPACLSSEETDTRLILPRCPAAA*TEPCKG Trigger: CCCTTTACAAGGTTCTGTTCAAGCTGCTGCTGGGCA...GCGAGGTAAAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTCACTTTCAATTGCTAAGAGGCAGAGCCTTTGCCCTGGCTTGTCCAGCTGTCCCCGCTGCTCTCTaGTGTCTCCTCCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCHFQLLRGRAFALACPAVPAAL*CLLLLP Trigger: AGGAAGAAGGAGGAGACAGCAGAGAGCAGCGGGGAC...AGCTGGACAAGCCAGGGCAAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACCCGCTTCTCCGAACTTaGCGCTGCCCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHPLLRT*RCPAAA Trigger: AGCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGG...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTACAGAGGTTTCCCCATaGAATGTCGTCGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALACPACLSSEETDTRLITEVSP*NVVEGV Trigger: AACTCCTTCGACGACATTCCATGGGGAAACCTCTGT...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCATGTCAATAAGAGAATaGAAAACCCACAGAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVPPTQCTCCACHTPPTMSIRE*KTHRGF Trigger: GAAACCTCTGTGGGTTTTCCATTCTCTTATTGACAT...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAGCCGGAGCTGAGGACTaGTGTCGGACAGTCTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSDVEKCKQIGHANKYRRAGAED*CRTVSA Trigger: CGCGGAGACTGTCCGACATCAGTCCTCAGCTCCGGC...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTGACCCAGCACAGGCCTGTCCTCCGTTTATCTTCATGTCATTATCCTTTTGCCCAAGTCCCCGCTaGTCTCTGCTGTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCDPAQACPPFIFMSLSFCPSPR*SLLSPP Trigger: AGGAGGAGACAGCAGAGAGCAGCGGGGACTTGGGCA...AAAGGATAATGACATGAAGATAAACGGAGGACAGGCCTGTGCTGGGTCACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | TCATGTGACCCAGCACAGGCCTGTCCTCCGTTTATCTTCATGTCATTATCCTTTCCTCCCTTTTGTAGCTaGTCGCCCAGGGCTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCDPAQACPPFIFMSLSFPPFCS*SPRAGS Trigger: GCTACCAGCCCTGGGCGACCAGCTACAAAAGGGAGG...AAAGGATAATGACATGAAGATAAACGGAGGACAGGCCTGTGCTGGGTCACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTAGTACAGGTAGTTTGTaGGAGTCCAAAGAACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALACPACLSSEETDTRLISTGSL*ESKEHQ Trigger: TTGGTGTTCTTTGGACTCTCACAAACTACCTGTACT...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGCCAGGGCTATGCCAATaGCTGAGTGACTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVPGLCQ*LSDCGS Trigger: GCTTCCACAGTCACTCAGTCATTGGCATAGCCCTGG...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCTTGAGCTGCCGGAGCTaGGGACTGATGTCGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEVPPSGIDLKNITMGASLSCRS*GLMSDS Trigger: ACTGTCCGACATCAGTCCTCAGCTCCGGCAGCTCAA...GGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGAACCTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCGTCCCCGCTGCTCTCTaGTGTCTCCTCCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVPPSGIDLKNITMGASVPAAL*CLLLLP Trigger: AGGAAGAAGGAGGAGACAGCAGAGAGCAGCGGGGAC...GGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGAACCTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGGAAGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAACCGCTTCTCCGAACTTaGCGCTGCCCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRSDVEKCKQIGHANKPLLRT*RCPAAA Trigger: AGCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGG...TTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCTTCCACTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCCAGGGCTATGCCAATaGCTGAGTGACTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTYNVTSLHIGQRCCRRPGLCQ*LSDCGS Trigger: GCTTCCACAGTCACTCAGTCATTGGCATAGCCCTGG...CCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CTAAATTATAAGACGGCGCCAGTGACATATAATGTCACCTCGCTTCACATAGGACCACCACCAAGTACTTaGGCTGCCGGAGCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNYKTAPVTYNVTSLHIGPPPST*AAGAED Trigger: GTCCTCAGCTCCGGCAGCTCAAGTACTTGGTGGTGG...TCCTATGTGAAGCGAGGTGACATTATATGTCACTGGCGCCGTCTTATAATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTCAGCAAGAAAACAAATaGTTTGTTGCAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PWLVQLACPLKRPTQGSFQQENK*FVAAEQ Trigger: CTGTTCTGCTGCAACAAATCATTTGTTTTCTTGCTG...AAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | GTCACACACCGCCAACCACCCTCCAAATACACTGGCCACTGGCTTTGTCACGTTCAGCAAGAAAACAAATaGTTTGTTGCAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTHRQPPSKYTGHWLCHVQQENK*FVAAEQ Trigger: CTGTTCTGCTGCAACAAATCATTTGTTTTCTTGCTG...AACGTGACAAAGCCAGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCCAGAGTTCCGGCATAGGTCATCATaGCAATGCCAGCGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSIRNRPQKHYHGCIPEFRHRSS*QCQRWQ Trigger: TTGCCATCGCTGGCATTGTCATGATGACCTATGCCG...GAACTCTGGGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCAGCGTGGGATACGTaGCAGCAATTCCAAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TRPARSEFCFLSCDPAQASAWDT*QQFQNL Trigger: TAAATTTTGGAATTGCTGTCACGTATCCCACGCTGA...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACTGTAAAGGGCTGACATaGAAGCAGAGCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHCKGLT*KQSPPP Trigger: TGGTGGTGGGCTCTGCTTCCATGTCAGCCCTTTACA...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCAGCAAGAAAACAAATaGTTTGTTGCAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPQQENK*FVAAEQ Trigger: CTGTTCTGCTGCAACAAATCATTTGTTTTCTTGCTG...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTGCTCCTCGATGGATGTaGGTCCCACCGGTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLDMPINTVELTAVTKTAPRWM*VPPVHW Trigger: CCAGTGGACCGGTGGGACTCACATCCATCGAGGAGC...AGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCCAGAGTTCACAGAAAGTTCCAGTTaGTGGCAAACCACGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIRNRPQKHYHGCIPEFTESSS*WQTTSG Trigger: CCCTGACGTGGTTTGCCACCAACTGGAACTTTCTGT...GAACTCTGGGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGGAAGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAACGGCATAGGTCATCATaGCAATGCCAGCGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRSDVEKCKQIGHANKRHRSS*QCQRWQ Trigger: TTGCCATCGCTGGCATTGTCATGATGACCTATGCCG...TTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCTTCCACTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CTAAATTATAAGACGGCGCCAGTGACATATAATGTCACCTCGCTTCACATAGGAAACCTTGTAAAGGGCTaGCATGGAAGCAGAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNYKTAPVTYNVTSLHIGNLVKG*HGSRAH Trigger: GTGGGCTCTGCTTCCATGTCAGCCCTTTACAAGGTT...TCCTATGTGAAGCGAGGTGACATTATATGTCACTGGCGCCGTCTTATAATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCACAATGTCACTTTCAATTGCTAAGAGGCAGAGCCTTTGCCCTGGCTTGTCAGCGTGGGATACGTaGCAGCAATTCCAAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QCTMSLSIAKRQSLCPGLSAWDT*QQFQNL Trigger: TAAATTTTGGAATTGCTGTCACGTATCCCACGCTGA...CAAGCCAGGGCAAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTGTGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTTGCCCAAGTCCCCGCTaGTCTCTGCTGTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLDMPINTVELTAVTKTCPSPR*SLLSPP Trigger: AGGAGGAGACAGCAGAGAGCAGCGGGGACTTGGGCA...AGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCTGCCCAGCAGCAGCTTaGACAGAACCTTGTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SASKLDMPINTVELTAVTCPAAA*TEPCKG Trigger: CCCTTTACAAGGTTCTGTTCAAGCTGCTGCTGGGCA...GGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGCATTTACAGGTACACTaGGGACAATTCCAAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVHLQVH*GQFQET Trigger: TGTCTCTTGGAATTGTCCTCAGTGTACCTGTAAATG...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGAGTACAGGTAGTTTGTaGGAGTCCAAAGAACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVTYNVTSLHIGQRCCRRSTGSL*ESKEHQ Trigger: TTGGTGTTCTTTGGACTCTCACAAACTACCTGTACT...CCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTCCAGGGCTATGCCAATaGCTGAGTGACTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLDMPINTVELTAVTKTPGLCQ*LSDCGS Trigger: GCTTCCACAGTCACTCAGTCATTGGCATAGCCCTGG...AGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACAACCTTGTAAAGGGCTaGCATGGAAGCAGAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCKQIGHANKYRRTYCSYNLVKG*HGSRAH Trigger: GTGGGCTCTGCTTCCATGTCAGCCCTTTACAAGGTT...GTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACTTTGCACACATGTCCTaGGTAGTACAATGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHFAHMS*VVQWEE Trigger: TTCTTCCCATTGTACTACGCAGGACATGTGTGCAAA...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAGCTTCTCTGTGGATTTaGACACATGTCCTGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSDVEKCKQIGHANKYRRASLWI*THVLRS Trigger: ACTACGCAGGACATGTGTGCAAATCCACAGAGAAGC...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGAAGAACACCAAAAGGTaGTGCCTTGGTAAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PVTYNVTSLHIGQRCCRRKNTKR*CLGKEH Trigger: GTGTTCTTTACCAAGGCAGCACCTTTTGGTGTTCTT...CCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GTGACATATAATGTCACCTCGCTTCACATAGGACAGAGATGCTGTAGAAGGCACTCCTGCGTAGTACAATaGGAAGAACAGAAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTYNVTSLHIGQRCCRRHSCVVQ*EEQKVP Trigger: TGGAACTTTCTGTTCTTCCCATTGTACTACGCAGGA...GTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTGACATTATATGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| 3UTR CAA 72 bp | CTGAAAAATAATCACAGTGCACAATGTCACTTTCAATaGCTAAGAGGCAGAGCCTTTGCCCTGGCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKNNHSAQCHFQ*LRGRAFALACP Trigger: TGGACAAGCCAGGGCAAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTGTGCACTGTGATTATTTTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCTGTCCTCCGTTTATCTTCATGTCATTATCCTTTTCTGCTTTGCCTCTAAGAACACCAAAAGGTaGTGCCTTGGTAAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSSVYLHVIILFCFASKNTKR*CLGKEH Trigger: GTGTTCTTTACCAAGGCAGCACCTTTTGGTGTTCTT...AGAGGCAAAGCAGAAAAGGATAATGACATGAAGATAAACGGAGGACAGGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GCTCATTTTACCTCGCTTTACATTCATTTAAGAAGCGCTGAGAGGTTCTTTTCTACAGAAAGTTCCAGTTaGTGGCAAACCACGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFTSLYIHLRSAERFFSTESSS*WQTTSG Trigger: CCCTGACGTGGTTTGCCACCAACTGGAACTTTCTGT...AGAAAAGAACCTCTCAGCGCTTCTTAAATGAATGTAAAGCGAGGTAAAATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | TATCCACCTATATGTTTATCTATCCATCGATCGATCCATCCATCCATCCATCCAACAGAGGTTTCCCCATaGAATGTCGTCGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YPPICLSIHRSIHPSIHPTEVSP*NVVEGV Trigger: AACTCCTTCGACGACATTCCATGGGGAAACCTCTGT...TGGATGGATGGATGGATGGATCGATCGATGGATAGATAAACATATAGGTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGGAAGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATCAGCGTGGGATACGTaGCAGCAATTCCAAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGRSDVEKCKQIGHANKSAWDT*QQFQNL Trigger: TAAATTTTGGAATTGCTGTCACGTATCCCACGCTGA...TTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCTTCCACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CCA 90 bp | AAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACACAGAGGTTTCCCCATaGAATGTCGTCGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKQIGHANKYRRTYCSYTEVSP*NVVEGV Trigger: AACTCCTTCGACGACATTCCATGGGGAAACCTCTGT...GTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCCATTTACAGGTACACTaGGGACAATTCCAAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SASKLDMPINTVELTAVTHLQVH*GQFQET Trigger: TGTCTCTTGGAATTGTCCTCAGTGTACCTGTAAATG...GGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCTTTGCACACATGTCCTaGGTAGTACAATGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SASKLDMPINTVELTAVTFAHMS*VVQWEE Trigger: TTCTTCCCATTGTACTACGCAGGACATGTGTGCAAA...GGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAAAACAAATGATTTGTTaGAGCAGAACAGGACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSDVEKCKQIGHANKYRRKQMIC*SRTGRR Trigger: TCTCCGTCCTGTTCTGCTGCAACAAATCATTTGTTT...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAAGTACAGGTAGTTTGTaGGAGTCCAAAGAACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASKLDMPINTVELTAVTKSTGSL*ESKEHQ Trigger: TTGGTGTTCTTTGGACTCTCACAAACTACCTGTACT...TTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAATCCTGCGTAGTACAATaGGAAGAACAGAAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKLDMPINTVELTAVTKSCVVQ*EEQKVP Trigger: TGGAACTTTCTGTTCTTCCCATTGTACTACGCAGGA...TTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAATGTCAATAAGAGAATaGAAAACCCACAGAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSDVEKCKQIGHANKYRRMSIRE*KTHRGF Trigger: GAAACCTCTGTGGGTTTTCCATTCTCTTATTGACAT...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTGTACATGTATGTAAACAAATGATTTGTTaGAGCAGAACAGGACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPINTVELTAVTKTVHVCKQMIC*SRTGRR Trigger: TCTCCGTCCTGTTCTGCTGCAACAAATCATTTGTTT...ACATACATGTACAGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTGTACATGTATGTATGTCAATAAGAGAATaGAAAACCCACAGAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPINTVELTAVTKTVHVCMSIRE*KTHRGF Trigger: GAAACCTCTGTGGGTTTTCCATTCTCTTATTGACAT...ACATACATGTACAGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCGTCCCTCCCACACAGTGCACCTGCTGTGCATGTCACACACCGCCAACCGCCGCTTCTCCGAACTaGGCGCTGCCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAVPPTQCTCCACHTPPTAASPN*ALPSSS Trigger: GCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGGC...GGTTGGCGGTGTGTGACATGCACAGCAGGTGCACTGTGTGGGAGGGACGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS TCA 90 bp | GAGCTGAGGACTGATGTCGGACAGTCTCCGCGGGCTGACGTCCGGTaGCCTCCTCATGCCAACAGCAATGCTCTTGGTCCTGGAAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRTDVGQSPRADVR*PPHANSNALGPGSA Trigger: GGCGCTTCCAGGACCAAGAGCATTGCTGTTGGCATGAGGAGGTCACCGGACGTCAGCCCGCGGAGACTGTCCGACATCAGTCCTCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS TCA 90 bp | TCCTTGATCGCCTCATCCACCACCAAGTACTTGAGCTGCCGGAGCTaGGGACTGATGTCGGACAGTCTCCGCGGGCTGACGTCCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLIASSTTKYLSCRS*GLMSDSLRGLTSGD Trigger: GTCACCGGACGTCAGCCCGCGGAGACTGTCCGACATCAGTCCTCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGATGAGGCGATCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS GCA 90 bp | TCTGCTCCTGCTCTGGGGACCCGTGCCCAAGTCCCCGCTGCTCTCTaGTGTCTCCTCCTTCTTCCTCACTTTGAGGCGGGTGAGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SAPALGTRAQVPAAL*CLLLLPHFEAGEQL Trigger: AAGTTGCTCACCCGCCTCAAAGTGAGGAAGAAGGAGGAGACAGCAGAGAGCAGCGGGGACTTGGGCACGGGTCCCCAGAGCAGGAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTGCCGCTTCTCCGAACTaGGCGCTGCCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPAASPN*ALPSSS Trigger: GCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGGC...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS GCA 90 bp | GAACAGAAAGTTCCAGTTGGTGGCAAACCACGTCAGGGTGAACGGTaGGTCGAAGGTCTTGAAAGTCAGCCTGGCGAGCTGCGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQKVPVGGKPRQGER*VEGLESQPGELRGA Trigger: GGCTCCACGCAGCTCGCCAGGCTGACTTTCAAGACCTTCGACGCACCGTTCACCCTGACGTGGTTTGCCACCAACTGGAACTTTCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CATGGTCTTGTGAGACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGGTCAGGACCGGACTGTaGCAGGCGCTGAGCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGLVRPDQLGRSSVFYHVVRTGL*QALSGA Trigger: GGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCTGAC...CACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGTCTCACAAGACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108759.3 |
||
| CDS-3UTR CAA 90 bp | CAATGTCACTTTCAATTGCTAAGAGGCAGAGCCTTTGCCCTGGCTTGTCCAGCTGCCGCTTCTCCGAACTaGGCGCTGCCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCHFQLLRGRAFALACPAAASPN*ALPSSS Trigger: GCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGGC...AGCTGGACAAGCCAGGGCAAAGGCTCTGCCTCTTAGCAATTGAAAGTGACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCCTCCCCTTCCACTTaGGTGAGGGTCAGGACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRPARSEFCFLSCDPAQASSPST*VRVRTG Trigger: TCCGGTCCTGACCCTCACCAAAGTGGAAGGGGAGGA...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108759.3 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTAGGCGGGTGAGCAACTaGATCAACCAGACATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALACPACLSSEETDTRLIRRVSN*INQTSH Trigger: GTGGGATGTCTGGTTGATCAAGTTGCTCACCCGCCT...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCATTTCAGATCCTCCTaGATCGCCTCATCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPHFRSS*IASSTT Trigger: GGTGGTGGATGAGGCGATCAAGGAGGATCTGAAATG...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | GTCACACACCGCCAACCACCCTCCAAATACACTGGCCACTGGCTTTGTCACGTTGTGATGAAGAGGATGTaGAACACACCCAAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VTHRQPPSKYTGHWLCHVVMKRM*NTPKMD Trigger: GTCCATCTTGGGTGTGTTCAACATCCTCTTCATCAC...AACGTGACAAAGCCAGTGGCCAGTGTATTTGGAGGGTGGTTGGCGGTGTGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTTCCAAAAGGTGCTGCCTaGGTAAAGAACACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWLVQLACPLKRPTQGSFPKGAA*VKNTFR Trigger: TCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGG...AAATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | ACCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCCCAAAAGGTGCTGCCTaGGTAAAGAACACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRPARSEFCFLSCDPAQAPKGAA*VKNTFR Trigger: TCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGG...GGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CCA 90 bp | AGACTGCTTCTCTGTGGATTTGCACACATGTCCTGCGTAGTACAATaGGAAGAACAGAAAGTTCCAGTTGGTGGCAAACCACGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLLLCGFAHMSCVVQ*EEQKVPVGGKPRQG Trigger: ACCCTGACGTGGTTTGCCACCAACTGGAACTTTCTGTTCTTCCCATTGTACTACGCAGGACATGTGTGCAAATCCACAGAGAAGCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACTCCAGTTGTGCCGGCTaGTCCTCCCACCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KCKQIGHANKYRRTYCSYSSCAG*SSHQPL Trigger: CAGAGGCTGGTGGGAGGACAAGCCGGCACAACTGGA...GTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCTTGTCCAGCTTGCCTGTCCTCTGAAGAGACCGACACAAGGCTCATTCGTTTATCTTCTTTATaGCGTGTAAGTACAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALACPACLSSEETDTRLIRLSSL*RVSTGS Trigger: ACTACCTGTACTTACACGCAATAAAGAAGATAAACG...AATGAGCCTTGTGTCGGTCTCTTCAGAGGACAGGCAAGCTGGACAAGCCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGTCCTCCGTTTATCTTCATGTCATTATCCTTTTCTGCTTTGCCTCTAGGCGGGTGAGCAACTaGATCAACCAGACATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGLSSVYLHVIILFCFASRRVSN*INQTSH Trigger: GTGGGATGTCTGGTTGATCAAGTTGCTCACCCGCCT...AGAGGCAAAGCAGAAAAGGATAATGACATGAAGATAAACGGAGGACAGGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CTAAATTATAAGACGGCGCCAGTGACATATAATGTCACCTCGCTTCACATAGGAAGGCGGGTGAGCAACTaGATCAACCAGACATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LNYKTAPVTYNVTSLHIGRRVSN*INQTSH Trigger: GTGGGATGTCTGGTTGATCAAGTTGCTCACCCGCCT...TCCTATGTGAAGCGAGGTGACATTATATGTCACTGGCGCCGTCTTATAATTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | CCAGACCAGCTAGGTCGGAGTTCTGTTTTCTATCATGTGACCCAGCACAGGCCTCGTTTATCTTCTTTATaGCGTGTAAGTACAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PDQLGRSSVFYHVTQHRPRLSSL*RVSTGS Trigger: ACTACCTGTACTTACACGCAATAAAGAAGATAAACG...AGGCCTGTGCTGGGTCACATGATAGAAAACAGAACTCCGACCTAGCTGGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCATCAGGAATAGACCTCAAAAACATTACCATGGGTGCATCCCAGAGTTCGTGATGAAGAGGATGTaGAACACACCCAAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSIRNRPQKHYHGCIPEFVMKRM*NTPKMD Trigger: GTCCATCTTGGGTGTGTTCAACATCCTCTTCATCAC...GAACTCTGGGATGCACCCATGGTAATGTTTTTGAGGTCTATTCCTGATGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | TATCCACCTATATGTTTATCTATCCATCGATCGATCCATCCATCCATCCATCCATCCTTCTTCCTCACTTaGAGGCGGGTGAGCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: YPPICLSIHRSIHPSIHPSFFLT*RRVSNL Trigger: CAAGTTGCTCACCCGCCTCAAAGTGAGGAAGAAGGA...TGGATGGATGGATGGATGGATCGATCGATGGATAGATAAACATATAGGTGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGATTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RSDVEKCKQIGHANKYRRFRVKP*SPKNRQ Trigger: CTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAA...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | GCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAATCCTTCTTCCTCACTTaGAGGCGGGTGAGCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASKLDMPINTVELTAVTKSFFLT*RRVSNL Trigger: CAAGTTGCTCACCCGCCTCAAAGTGAGGAAGAAGGA...TTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | AGGTCTGACGTGGAAAAGTGCAAGCAAATTGGACATGCCAATAAATACCGTAGACCAAAAGGTGCTGCCTaGGTAAAGAACACTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSDVEKCKQIGHANKYRRPKGAA*VKNTFR Trigger: TCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGG...TCTACGGTATTTATTGGCATGTCCAATTTGCTTGCACTTTTCCACGTCAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
||
| CDS-3UTR CAA 90 bp | GCTCATTTTACCTCGCTTTACATTCATTTAAGAAGCGCTGAGAGGTTCTTTTCTTTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AHFTSLYIHLRSAERFFSFRVKP*SPKNRQ Trigger: CTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAA...AGAAAAGAACCTCTCAGCGCTTCTTAAATGAATGTAAAGCGAGGTAAAATGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | GGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAAACTGTACATGTGTGATGAAGAGGATGTaGAACACACCCAAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHANKYRRTYCSYQNCTCVMKRM*NTPKMD Trigger: GTCCATCTTGGGTGTGTTCAACATCCTCTTCATCAC...ACATGTACAGTTTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS-3UTR CAA 90 bp | GCAAGCAAATTGGACATGCCAATAAATACCGTAGAACTTACTGCAGTTACCAAACGTTTATCTTCTTTATaGCGTGTAAGTACAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASKLDMPINTVELTAVTKRLSSL*RVSTGS Trigger: ACTACCTGTACTTACACGCAATAAAGAAGATAAACG...TTTGGTAACTGCAGTAAGTTCTACGGTATTTATTGGCATGTCCAATTTGCTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | TCCCCTTCCACTTTGGTGAGGGTCAGGACCGGACTGTaGCAGGCGCTGAGCGGGGCCACCCTGGCCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSTLVRVRTGL*QALSGATLAEC Trigger: GCACTCGGCCAGGGTGGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCTGACCCTCACCAAAGTGGAAGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108759.3 |
||
| CDS GCA 72 bp | GGTGCGTCGAAGGTCTTGAAAGTCAGCCTGGCGAGCTaGGTGGAGCCGGCCCAGGAGGCGCACACGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GASKVLKVSLAS*VEPAQEAHTQN Trigger: GTTCTGCGTGTGCGCCTCCTGGGCCGGCTCCACGCAGCTCGCCAGGCTGACTTTCAAGACCTTCGACGCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS CAA 72 bp | GCAAACCACGTCAGGGTGAACGGTGCGTCGAAGGTCTaGAAAGTCAGCCTGGCGAGCTGCGTGGAGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ANHVRVNGASKV*KVSLASCVEPA Trigger: GGCCGGCTCCACGCAGCTCGCCAGGCTGACTTTCAAGACCTTCGACGCACCGTTCACCCTGACGTGGTTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
||
| CDS TCA 72 bp | GCCTCATCCACCACCAAGTACTTGAGCTGCCGGAGCTaGGGACTGATGTCGGACAGTCTCCGCGGGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: ASSTTKYLSCRS*GLMSDSLRGLT Trigger: CGTCAGCCCGCGGAGACTGTCCGACATCAGTCCTCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGATGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS CCA 72 bp | CGTCCGGTGACCTCCTCATGCCAACAGCAATGCTCTTaGTCCTGGAAGCGCCGCCGGGAAACTCTCGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVTSSCQQQCS*SWKRRRETLGS Trigger: GGATCCGAGAGTTTCCCGGCGGCGCTTCCAGGACCAAGAGCATTGCTGTTGGCATGAGGAGGTCACCGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
||
| CDS CAA 72 bp | ACGTCCGGTGACCTCCTCATGCCAACAGCAATGCTCTaGGTCCTGGAAGCGCCGCCGGGAAACTCTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: TSGDLLMPTAML*VLEAPPGNSRI Trigger: GATCCGAGAGTTTCCCGGCGGCGCTTCCAGGACCAAGAGCATTGCTGTTGGCATGAGGAGGTCACCGGACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS TCA 72 bp | ACTGATGTCGGACAGTCTCCGCGGGCTGACGTCCGGTaGCCTCCTCATGCCAACAGCAATGCTCTTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TDVGQSPRADVR*PPHANSNALGP Trigger: AGGACCAAGAGCATTGCTGTTGGCATGAGGAGGTCACCGGACGTCAGCCCGCGGAGACTGTCCGACATCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS GCA 72 bp | GTTCCAGTTGGTGGCAAACCACGTCAGGGTGAACGGTaGGTCGAAGGTCTTGAAAGTCAGCCTGGCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPVGGKPRQGER*VEGLESQPGEL Trigger: CAGCTCGCCAGGCTGACTTTCAAGACCTTCGACGCACCGTTCACCCTGACGTGGTTTGCCACCAACTGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS TCA 72 bp | CTGAGTGACTGTGGAAGCCATCGGCATAGGTCATCATaGCAATGCCAGCGATGGCAAGGATGGCGGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: LSDCGSHRHRSS*QCQRWQGWRPR Trigger: TCGTGGCCGCCATCCTTGCCATCGCTGGCATTGTCATGATGACCTATGCCGATGGCTTCCACAGTCACTCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | CCCAAGATGGACAGGAATAAGGCCGCTTCTCCGAACTaGGCGCTGCCCAGCAGCAGCTTGAACAGAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PKMDRNKAASPN*ALPSSSLNRTL Trigger: CAAGGTTCTGTTCAAGCTGCTGCTGGGCAGCGCCAAGTTCGGAGAAGCGGCCTTATTCCTGTCCATCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 90 bp | TCTGCTGTCTCCTCCTTCTTCCTCACTTTGAGGCGGGTGAGCAACTaGATCAACCAGACATCCCACTCTTCTGGAAGGAGCAGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAVSSFFLTLRRVSN*INQTSHSSGRSRRR Trigger: CCTCCTCCTGCTCCTTCCAGAAGAGTGGGATGTCTGGTTGATCAAGTTGCTCACCCGCCTCAAAGTGAGGAAGAAGGAGGAGACAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | TCCTCCTTCTTCCTCACTTTGAGGCGGGTGAGCAACTaGATCAACCAGACATCCCACTCTTCTGGAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSFFLTLRRVSN*INQTSHSSGRS Trigger: GCTCCTTCCAGAAGAGTGGGATGTCTGGTTGATCAAGTTGCTCACCCGCCTCAAAGTGAGGAAGAAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | AGATCCTCCACAGAGCGAGACCATTTCAGATCCTCCTaGATCGCCTCATCCACCACCAAGTACTTGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSSTERDHFRSS*IASSTTKYLSC Trigger: GCAGCTCAAGTACTTGGTGGTGGATGAGGCGATCAAGGAGGATCTGAAATGGTCTCGCTCTGTGGAGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238518.2 |
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| CDS CAA 90 bp | CCAAAAGGTGCTGCCTTGGTAAAGAACACTTTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAGCATTCCTTTTGTAGCTGGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PKGAALVKNTFRVKP*SPKNRQHSFCSWSP Trigger: GGGCGACCAGCTACAAAAGGAATGCTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238386.2 |
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| CDS TCA 72 bp | TGGTGTAGTGATCGACCACTGCATTTACAGGTACACTaGGGACAATTCCAAGAGACATCAGCGTGGGATACG | + |
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Preference number: 6 (lower is better) Translates to: WCSDRPLHLQVH*GQFQETSAWDT Trigger: CGTATCCCACGCTGATGTCTCTTGGAATTGTCCTCAGTGTACCTGTAAATGCAGTGGTCGATCACTACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | GCTGCCTTGGTAAAGAACACTTTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAGCATTCCCTGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: AALVKNTFRVKP*SPKNRQHSLYL Trigger: GAGATACAGGGAATGCTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS GCA 72 bp | CAGGTAGTTTGTGAGAGTCCAAAGAACACCAAAAGGTaGTGCCTTGGTAAAGAACACTTTCAGAGTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QVVCESPKNTKR*CLGKEHFQSQA Trigger: GGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGGTGTTCTTTGGACTCTCACAAACTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | GCTGCCTTGGTAAAGAACACTTTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAGCATTCCTTTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: AALVKNTFRVKP*SPKNRQHSFCS Trigger: GCTACAAAAGGAATGCTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238386.2 |
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| CDS CAA 90 bp | CCAAAAGGTGCTGCCTTGGTAAAGAACACTTTCAGAGTCAAGCCATaGTCTCCAAAGAACCGACAGCATTCCCTGTATCTCTGTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PKGAALVKNTFRVKP*SPKNRQHSLYLCFI Trigger: TATGAAACAGAGATACAGGGAATGCTGTCGGTTCTTTGGAGACAATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108759.3 ENSMUST00000238518.2 |
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| CDS CCA 72 bp | ATGATTTGTTGCAGCAGAACAGGACGGAGACGTCTGTaGCGTTTATCTTCTTTATTGCGTGTAAGTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: MICCSRTGRRRL*RLSSLLRVSTG Trigger: ACCTGTACTTACACGCAATAAAGAAGATAAACGCCACAGACGTCTCCGTCCTGTTCTGCTGCAACAAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS GCA 72 bp | GTAGTTTGTGAGAGTCCAAAGAACACCAAAAGGTGCTaGCTTGGTAAAGAACACTTTCAGAGTCAAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: VVCESPKNTKRC*LGKEHFQSQAI Trigger: AATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGGTGTTCTTTGGACTCTCACAAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS CAA 72 bp | TTTGTGAGAGTCCAAAGAACACCAAAAGGTGCTGCCTaGGTAAAGAACACTTTCAGAGTCAAGCCATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: FVRVQRTPKGAA*VKNTFRVKPLS Trigger: AGACAATGGCTTGACTCTGAAAGTGTTCTTTACCAAGGCAGCACCTTTTGGTGTTCTTTGGACTCTCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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| CDS TCA 72 bp | TTATCTTCTTTATTGCGTGTAAGTACAGGTAGTTTGTaGGAGTCCAAAGAACACCAAAAGGTGCTGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSLLRVSTGSL*ESKEHQKVLPW Trigger: CCAAGGCAGCACCTTTTGGTGTTCTTTGGACTCTCACAAACTACCTGTACTTACACGCAATAAAGAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108759.3 ENSMUST00000238386.2 ENSMUST00000238518.2 |
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