Pregenerated sensors for SLC35F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038602Ensembl transcript IDs: ENSMUST00000105473.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGGTCACAGCACAAAATCCTCATCGAACAGGCAATCCAACAGGTaGCAGAGGACACCATTAGCCACAAGGTCACCAGGATGGGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: KGHSTKSSSNRQSNR*QRTPLATRSPGWAS Trigger: GCTTGCCCATCCTGGTGACCTTGTGGCTAATGGTGTCCTCTGTCACCTGTTGGATTGCCTGTTCGATGAGGATTTTGTGCTGTGACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 90 bp | GTGAAACTGCACCTACTAAATACCTTTCTCTATGTACAATACAGATaGTGGGCAAACACATGGCCTCTGAGTTGTCCTCAGTGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: VKLHLLNTFLYVQYR*WANTWPLSCPQWAG Trigger: CCCTGCCCACTGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGAAAGGTATTTAGTAGGTGCAGTTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 90 bp | GGTCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTaGAGCCTGAGTCTCCAGTGGTCTTCAGCTTCTTCCTTTGATGAA | + |
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Preference number: 1 (lower is better) Translates to: GQDTHYQNLSLSQVD*SLSLQWSSASSFDE Trigger: TTCATCAAAGGAAGAAGCTGAAGACCACTGGAGACTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 90 bp | GAACTTGTCCATTTCTTGGTCTACCTGTATATGTGTTCGAAGCTGTaGGTAGGTCTGACCAAGGCAAGCTCTGTCCTCAGTGAAAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: ELVHFLVYLYMCSKL*VGLTKASSVLSESL Trigger: GAGACTTTCACTGAGGACAGAGCTTGCCTTGGTCAGACCTACTCACAGCTTCGAACACATATACAGGTAGACCAAGAAATGGACAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 90 bp | TGTGGTTTGCTTCTTATCAACTTCATACAGAGGACTGTTCTTGCTTaGGGTGAGAAGAGTGGTAGATTAAAATGCCGGAATTCTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CGLLLINFIQRTVLA*GEKSGRLKCRNSCW Trigger: CCAGCAAGAATTCCGGCATTTTAATCTACCACTCTTCTCACCTCAAGCAAGAACAGTCCTCTGTATGAAGTTGATAAGAAGCAAACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR CCA 90 bp | TACCACAAGTTAGCAATACCTAAACTAAACATTGAAATATCTTCATaGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTA | + |
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Preference number: 1 (lower is better) Translates to: YHKLAIPKLNIEISS*DTVVRTCPFLGLPV Trigger: TACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTTTAGTTTAGGTATTGCTAACTTGTGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCAGGCAATCCAACAGGTaGCAGAGGACACCATTAGCC | + |
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Preference number: 2 (lower is better) Translates to: AHRRRQAKSLVDSRRASARQSNR*QRTPLA Trigger: GGCTAATGGTGTCCTCTGTCACCTGTTGGATTGCCT...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTCACCAGGATGGGCAAGCTTCTGTGGCATGCATCACTCACATAGTCTGAGGTGGATTGAAGCCTaGGTCTCCAGTGGTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TRSPGWASFCGMHHSHSLRWIEA*VSSGLQ Trigger: CTGAAGACCACTGGAGACTCAGGCTTCAATCCACCT...CAGACTATGTGAGTGATGCATGCCACAGAAGCTTGCCCATCCTGGTGACCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGCAAACACATGGCCTCTaGGTTGTCCTCAGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SGYTLSKPLSESGGLKPEQTHGL*VVLSGQ Trigger: CTGCCCACTGAGGACAACTCAGAGGCCATGTGTTTG...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGCTGAGTCAGGTGGATTaGAGCCTGAGTCTCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LHGTQWCELVHFLVYLYMLSQVD*SLSLQW Trigger: CCACTGGAGACTCAGGCTTCAATCCACCTGACTCAG...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGTCACCAGGATGGGCAAGCTTCTGTGGCATGCATCACTCACATAGTCTGATCAAAACCTCTCTCTaGGTCAGGTGGATTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TRSPGWASFCGMHHSHSLIKTSL*VRWIEA Trigger: GGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGAT...CAGACTATGTGAGTGATGCATGCCACAGAAGCTTGCCCATCCTGGTGACCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCTTTATGTTGAGCAGGTaGGGGTCTGGTAATAATTCC | + |
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Preference number: 2 (lower is better) Translates to: AHRRRQAKSLVDSRRASAFMLSR*GSGNNS Trigger: GGAATTATTACCAGACCCTCACCTGCTCAACATAAA...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCCATCAAGGATCCATTTaGATGGTATTGAAGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AHRRRQAKSLVDSRRASAHQGSI*MVLKSA Trigger: GGCTGACTTCAATACCATTCAAATGGATCCTTGATG...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGACTTGACTCAAAGAGGTaGGACGAACAGTGGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGLDSKR*DEQWDS Trigger: GGAGTCCCACTGTTCGTCCCACCTCTTTGAGTCAAG...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGATTTCTGTGTTTGGAGTaGGGTGGGTGTGGGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGFLCLE*GGCGGN Trigger: ATTTCCCCCACACCCACCCCACTCCAAACACAGAAA...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGAAGTGGGATTTATGTTaGGCAGGTGAGGGTCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LHGTQWCELVHFLVYLYMKWDLC*AGEGLV Trigger: TACCAGACCCTCACCTGCTCAACATAAATCCCACTT...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAAGGACTGTTCTTGCTTaGGGTGAGAAGAGTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGRTVLA*GEKSGR Trigger: TCTACCACTCTTCTCACCTCAAGCAAGAACAGTCCT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGAGGTGCATTAATGTCTaGTCACAAAGACACTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LHGTQWCELVHFLVYLYMRCINV*SQRHWM Trigger: CATCCAGTGTCTTTGTGATCAGACATTAATGCACCT...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAATAGACTCCTACCCATaGGGTAAAATCTGCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGIDSYP*GKICTD Trigger: ATCAGTGCAGATTTTACCCCATGGGTAGGAGTCTAT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAATGTTACCAGCTTCATaGATGGAGATAAACCAACAC | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGMLPAS*MEINQH Trigger: GTGTTGGTTTATCTCCATTCATGAAGCTGGTAACAT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGACCTGATATTCACATTTaGTTTCCATACAATGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QLLHCHSQSMGEHANRKGPDIHI*FPYNGV Trigger: GACTCCATTGTATGGAAACCAAATGTGAATATCAGG...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTATTGAAGTCAGCCAAGCTACAGAGAACTTTCACACTGACACGTGAAATTAGAAAGCCAGTGGCCTaGAATAAGCAGAAAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: MVLKSAKLQRTFTLTREIRKPVA*NKQKMK Trigger: TTTCATTTTCTGCTTATTCCAGGCCACTGGCTTTCT...AATTTCACGTGTCAGTGTGAAAGTTCTCTGTAGCTTGGCTGACTTCAATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAATGCCAGCCATGTTTATaGCTTGTTGAGGTCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKCQPCL*LVEVLL Trigger: AAGTAGGACCTCAACAAGTCATAAACATGGCTGGCA...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTTCCTTATATTCTACTATTAGGTGGGTATTGAGTGTGATCAAAGTGCCAGCTTTTCCAGTCCCTTaGTTAATTTCCATGACATCA | + |
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Preference number: 2 (lower is better) Translates to: CFSLYSTIRWVLSVIKVPAFPVP*LISMTS Trigger: TGATGTCATGGAAATTAATCAAGGGACTGGAAAAGC...TGGCACTTTGATCACACTCAATACCCACCTAATAGTAGAATATAAGGAAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR CAA 90 bp | TACATAAACATTTATACAAACCCTGTAACTCCATCAAGGATCCATTaGAATGGTATTGAAGTCAGCCAAGCTACAGAGAACTTTCACACT | + |
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Preference number: 2 (lower is better) Translates to: YINIYTNPVTPSRIH*NGIEVSQATENFHT Trigger: AGTGTGAAAGTTCTCTGTAGCTTGGCTGACTTCAATACCATTCAAATGGATCCTTGATGGAGTTACAGGGTTTGTATAAATGTTTATGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACCACATGGCCTCTGAGTaGTCCTCAGTGGGCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TATVTITLFPLPAPLSNHHMASE*SSVGRA Trigger: TGCCCTGCCCACTGAGGACAACTCAGAGGCCATGTG...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCCTTAATTTTCTGTGTTaGGAGTGGGGTGGGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: AHRRRQAKSLVDSRRASALNFLC*EWGGCG Trigger: CCCACACCCACCCCACTCCAAACACAGAAAATTAAG...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | AGCACAAAATCCTCATCGAACAGGCAATCCAACAGGTaGCAGAGGACACCATTAGCCACAAGGTCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: STKSSSNRQSNR*QRTPLATRSPG Trigger: TCCTGGTGACCTTGTGGCTAATGGTGTCCTCTGTCACCTGTTGGATTGCCTGTTCGATGAGGATTTTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGTCTGAGTCAGGTGGATaGAAGCCTGAGTCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LHGTQWCELVHFLVYLYMSESGG*KPESPV Trigger: CACTGGAGACTCAGGCTTCAATCCACCTGACTCAGA...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACCCTAAACTCCTAGTCTaGGATGAGCCAATGTTACCA | + |
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Preference number: 3 (lower is better) Translates to: TATVTITLFPLPAPLSNHPKLLV*DEPMLP Trigger: TGGTAACATTGGCTCATCCAAGACTAGGAGTTTAGG...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | GGTAGACAGCCGAAGAGCTTCTGCCAGCCATGTTTATaGCTTGTTGAGGTCCTACTTTGCAATCTGGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: GRQPKSFCQPCL*LVEVLLCNLVL Trigger: TAAGACCAGATTGCAAAGTAGGACCTCAACAAGTCATAAACATGGCTGGCAGAAGCTCTTCGGCTGTCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | CATTTCTTGGTCTACCTGTATATGTGTTCGAAGCTGTaGGTAGGTCTGACCAAGGCAAGCTCTGTCCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: HFLVYLYMCSKL*VGLTKASSVLS Trigger: ACTGAGGACAGAGCTTGCCTTGGTCAGACCTACTCACAGCTTCGAACACATATACAGGTAGACCAAGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGAAAGGATTAGCTACCTaGCAGTCCACCTGTGAAACT | + |
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Preference number: 3 (lower is better) Translates to: SGYTLSKPLSESGGLKPEKGLAT*QSTCET Trigger: AGTTTCACAGGTGGACTGCAAGGTAGCTAATCCTTT...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGACTTCAGCTTCTTCCTTaGATGAAAGGATTAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: QLLHCHSQSMGEHANRKGLQLLP*MKGLAT Trigger: GGTAGCTAATCCTTTCATCAAAGGAAGAAGCTGAAG...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGGGCTTTTCCAGTCCCTaGATTAATTTCCATGACATC | + |
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Preference number: 3 (lower is better) Translates to: LHGTQWCELVHFLVYLYMGFSSP*INFHDI Trigger: GATGTCATGGAAATTAATCAAGGGACTGGAAAAGCC...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR GCA 72 bp | GGTGAGAAGAGTGGTAGATTAAAATGCCGGAATTCTTaGTGGTGTCTACTGAGGTTACGGAATCTCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: GEKSGRLKCRNS*WCLLRLRNLRN Trigger: GTTTCTGAGATTCCGTAACCTCAGTAGACACCAGCAAGAATTCCGGCATTTTAATCTACCACTCTTCTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR CCA 72 bp | CATGTTTATGACTTGTTGAGGTCCTACTTTGCAATCTaGTCTTACTTTATGAGAGACCCCCACCTCCCACAA | + |
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Preference number: 3 (lower is better) Translates to: HVYDLLRSYFAI*SYFMRDPHLPQ Trigger: TTGTGGGAGGTGGGGGTCTCTCATAAAGTAAGACCAGATTGCAAAGTAGGACCTCAACAAGTCATAAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR CCA 72 bp | ACATCGTACAGTTGTTACATTGCCACAGCCAGTCCATaGGGGAACATGCAAATAGAAAAGGAGATTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: TSYSCYIATASP*GNMQIEKEIAC Trigger: ACAAGCAATCTCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTGTACGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | CACCTACTAAATACCTTTCTCTATGTACAATACAGATaGTGGGCAAACACATGGCCTCTGAGTTGTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HLLNTFLYVQYR*WANTWPLSCPQ Trigger: CTGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGAAAGGTATTTAGTAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | CTCCTAGTCTTGGATGAGCCAATGTTACCAGCTTCATaGATGGAGATAAACCAACACAGGTGCATTAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LLVLDEPMLPAS*MEINQHRCINV Trigger: GACATTAATGCACCTGTGTTGGTTTATCTCCATTCATGAAGCTGGTAACATTGGCTCATCCAAGACTAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR TCA 72 bp | CTTCTTATCAACTTCATACAGAGGACTGTTCTTGCTTaGGGTGAGAAGAGTGGTAGATTAAAATGCCGGAAT | + |
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Preference number: 3 (lower is better) Translates to: LLINFIQRTVLA*GEKSGRLKCRN Trigger: ATTCCGGCATTTTAATCTACCACTCTTCTCACCTCAAGCAAGAACAGTCCTCTGTATGAAGTTGATAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| 3UTR CCA 72 bp | TTAGCAATACCTAAACTAAACATTGAAATATCTTCATaGGACACAGTGGTGCGAACTTGTCCATTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LAIPKLNIEISS*DTVVRTCPFLG Trigger: ACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTTTAGTTTAGGTATTGCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGACGGGGCCGGTGGAGGTaGTGGCTGCAGTTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QLLHCHSQSMGEHANRKGRGRWR*WLQLGL Trigger: CAGCCCCAACTGCAGCCACCACCTCCACCGGCCCCG...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CCA 90 bp | ACAGAGGACACCATTAGCCACAAGGTCACCAGGATGGGCAAGCTTCTGTGGCATACTTTGCGGATCCTCTaGCGCATGCTAGCCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TEDTISHKVTRMGKLLWHTLRIL*RMLARE Trigger: CTCCCGGGCTAGCATGCGCCAGAGGATCCGCAAAGT...ATGCCACAGAAGCTTGCCCATCCTGGTGACCTTGTGGCTAATGGTGTCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CCA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCTTTTCTCCTGCTCCCTaGTGCCTTCCCACGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AHRRRQAKSLVDSRRASAFSPAP*CLPTST Trigger: TGTGCTCGTGGGAAGGCACCAGGGAGCAGGAGAAAA...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR GCA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCCCTCTGCCAGGTACTTaGTCGTCAAGCCAATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: AHRRRQAKSLVDSRRASAPLPGT*SSSQFH Trigger: GTGGAATTGGCTTGACGAGCAAGTACCTGGCAGAGG...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CCA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACGCAGGTTCTCGATGGTaGTCACCACATGGTTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TATVTITLFPLPAPLSNHAGSRW*SPHGSA Trigger: CGCCGAACCATGTGGTGACCACCATCGAGAACCTGC...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR TCA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACGTCCACGACAGGTCCTaGAGGATTGCGGAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TATVTITLFPLPAPLSNHVHDRS*RIAELL Trigger: AAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGAC...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTGAAGTCAGCCAAGCTACAGAGAACTTTCACACTGACACGTGAAATTGGTGGTGGCTGCAGTTaGGGCTGCGGAGGCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVLKSAKLQRTFTLTREIGGGCS*GCGGSG Trigger: CCCCGAGCCTCCGCAGCCCCAACTGCAGCCACCACC...AATTTCACGTGTCAGTGTGAAAGTTCTCTGTAGCTTGGCTGACTTCAATACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGGCCGCTGCCCTCAGCTaGCAGGTTCTCGATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGYTLSKPLSESGGLKPEAAALS*QVLDGG Trigger: ACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGC...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGATCTCCTGCTCCCTGGTaGCTTCCCACGAGCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: QLLHCHSQSMGEHANRKGSPAPW*LPTSTS Trigger: GGATGTGCTCGTGGGAAGGCACCAGGGAGCAGGAGA...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACAGATCCCGTACAGGGTaGCTCCTCCTAAGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TATVTITLFPLPAPLSNHRSRTG*LLLRPE Trigger: TTCTGGTCTTAGGAGGAGCCACCCTGTACGGGATCT...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACAGACTACGATGCCGATaGAATGCACAGCCTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TATVTITLFPLPAPLSNHRLRCR*NAQPCT Trigger: GGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCT...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGCCCTGTTCAGCACTTTaGGGATCCTCTGGCGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LHGTQWCELVHFLVYLYMPCSAL*GSSGAC Trigger: GCATGCGCCAGAGGATCCGCAAAGTGCTGAACAGGG...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTATGTACAATACAGATGATGGGCAAACACATGGCCTCTGAGTTGTCCTCAGCTCTACCTGAGCCGTaGTGGGTAAGTCCACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTIQMMGKHMASELSSALPEP*WVSPRQ Trigger: CTGTCGTGGACTTACCCAGCACGGCTCAGGTAGAGC...TGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | AACATTGAAATATCTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCATCCGCTCCCACCATaGAGCCCATACCCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NIEISSWDTVVRTCPFLGHPLPP*SPYPGC Trigger: GCATCCTGGGTATGGGCTGCATGGTGGGAGCGGATG...ACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGCAGCTTATTTTCTCCTaGTCCCTGGTGCCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGYTLSKPLSESGGLKPEQLIFS*SLVPSH Trigger: GTGGGAAGGCACCAGGGAGCAGGAGAAAATAAGCTG...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAACTGGTGTGTTCGCATaGAAATCCTCTGCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLHCHSQSMGEHANRKGTGVFA*KSSARY Trigger: GTACCTGGCAGAGGATTTTCATGCGAACACACCAGT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | AACATTGAAATATCTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTACTGAAGGCTCTACCTaGGCCGTGCTGGGTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIEISSWDTVVRTCPFLGTEGST*AVLGKS Trigger: GGACTTACCCAGCACGGCTCAGGTAGAGCCTTCAGT...ACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAAAACAGTCCAGGAGCTaGACACTGGTCAGAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHCHSQSMGEHANRKGKQSRS*TLVRVV Trigger: CACAACTCTGACCAGTGTCCAGCTCCTGGACTGTTT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGTACACTCGGGGATCCTaGGCTATGTATGTAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGYTLSKPLSESGGLKPEYTRGS*AMYVEV Trigger: CACCTCTACATACATAGCCCAGGATCCCCGAGTGTA...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | AACATTGAAATATCTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGAGCCGTGCTaGGTAAGTCCACGACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NIEISSWDTVVRTCPFLGLPEPC*VSPRQV Trigger: GACCTGTCGTGGACTTACCCAGCACGGCTCAGGTAG...ACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGCAGGCTGTACAGATCTaGTGTGAGCAGAGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGTQWCELVHFLVYLYMQAVQI*CEQRKV Trigger: AACCTTTCTCTGCTCACAGCAGATCTGTACAGCCTG...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| 3UTR CAA 72 bp | TACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATaGAAGCCTGAGTCTCCAGTGGTCTTCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTLSKPLSESGG*KPESPVVFSFF Trigger: GAAGAAGCTGAAGACCACTGGAGACTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGAGAAGGGATAACACTTaGCCCAAAGCCACAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SGYTLSKPLSESGGLKPERRDNT*PKATEI Trigger: AATCTCTGTGGCTTTGGGTCAAGTGTTATCCCTTCT...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| 3UTR CAA 72 bp | GACAGCCGAAGAGCTTCTGCCAGCCATGTTTATGACTaGTTGAGGTCCTACTTTGCAATCTGGTCTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSRRASASHVYD*LRSYFAIWSYF Trigger: AAAGTAAGACCAGATTGCAAAGTAGGACCTCAACAAGTCATAAACATGGCTGGCAGAAGCTCTTCGGCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAGTTCCTTGTGTTCCATaGTGGCTAATTGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLHCHSQSMGEHANRKGVPCVP*WLIEFH Trigger: GTGGAATTCAATTAGCCATCATGGAACACAAGGAAC...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAAGCTGGTGTAGGTGACTaGAGGCTCTACCTGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKAGVGD*RLYLSR Trigger: ACGGCTCAGGTAGAGCCTTCAGTCACCTACACCAGC...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | AACATTGAAATATCTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCAGGTCCTGAAGGATTaGGGAACTGCTTGTACACTC | + |
|
Preference number: 4 (lower is better) Translates to: NIEISSWDTVVRTCPFLGQVLKD*GTACTL Trigger: GAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTG...ACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAGATATTTCAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTGAAGTCAGCCAAGCTACAGAGAACTTTCACACTGACACGTGAAATTGGACAGCTAGGGTGGTaGTGTATACCAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVLKSAKLQRTFTLTREIGQLGW*CIPRRG Trigger: TCCTCTTCTTGGTATACACCACCACCCTAGCTGTCC...AATTTCACGTGTCAGTGTGAAAGTTCTCTGTAGCTTGGCTGACTTCAATACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTCCTTATATTCTACTATTAGGTGGGTATTGAGTGTGATCAAAGTGCCAGAAGGATTGCGGAACTaGTTGTACACTCGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSLYSTIRWVLSVIKVPEGLRN*LYTRGS Trigger: GGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTC...TGGCACTTTGATCACACTCAATACCCACCTAATAGTAGAATATAAGGAAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAACTGGCAGGTTCTCGATaGTGGTCACCACATGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKLAGSR*WSPHGS Trigger: CGAACCATGTGGTGACCACCATCGAGAACCTGCCAG...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTCCTTATATTCTACTATTAGGTGGGTATTGAGTGTGATCAAAGTGCCAACGATGCCGATGAAATaGACAGCCTTGTACCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CFSLYSTIRWVLSVIKVPTMPMK*TALYRI Trigger: GATCCGGTACAAGGCTGTGCATTTCATCGGCATCGT...TGGCACTTTGATCACACTCAATACCCACCTAATAGTAGAATATAAGGAAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | TCTCTATGTACAATACAGATGATGGGCAAACACATGGCCTCTGAGTTGTCCTCACTAATTGAATTCCACTaGAAAATGCACCAAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCTIQMMGKHMASELSSLIEFH*KMHQRD Trigger: GTCTCTTTGGTGCATTTTTCAGTGGAATTCAATTAG...TGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTATGTACAATACAGATGATGGGCAAACACATGGCCTCTGAGTTGTCCTCAAATTCCACTGAAAAATaGACCAAAGAGACCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCTIQMMGKHMASELSSNSTEK*TKETNH Trigger: ATGATTGGTCTCTTTGGTGCATTTTTCAGTGGAATT...TGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAACAGGAGGTAAAGACCTaGAAACTTGTAGTGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKQEVKT*KLVVEE Trigger: CTCTTCCACTACAAGTTTTCAGGTCTTTACCTCCTG...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| 3UTR CAA 72 bp | ATTTATACAAACCCTGTAACTCCATCAAGGATCCATTaGAATGGTATTGAAGTCAGCCAAGCTACAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYTNPVTPSRIH*NGIEVSQATEN Trigger: GTTCTCTGTAGCTTGGCTGACTTCAATACCATTCAAATGGATCCTTGATGGAGTTACAGGGTTTGTATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| 3UTR CAA 72 bp | AGTTGCTTTTCCTTATATTCTACTATTAGGTGGGTATaGAGTGTGATCAAAGTGCCAGACTTTTCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCFSLYSTIRWV*SVIKVPDFSMV Trigger: CACCATTGAAAAGTCTGGCACTTTGATCACACTCAATACCCACCTAATAGTAGAATATAAGGAAAAGCAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTCCTTATATTCTACTATTAGGTGGGTATTGAGTGTGATCAAAGTGCCATTTCTTTATGACAACTaGCATAAAGCTGTAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: CFSLYSTIRWVLSVIKVPFLYDN*HKAVET Trigger: GGTCTCTACAGCTTTATGCCAGTTGTCATAAAGAAA...TGGCACTTTGATCACACTCAATACCCACCTAATAGTAGAATATAAGGAAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR TCA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAATCCATGATGGCTAATTaGATTCCACTGAAAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKSMMAN*IPLKNA Trigger: TGCATTTTTCAGTGGAATTCAATTAGCCATCATGGA...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS CCA 90 bp | AGCCCGGGAGGAGGCGGACAGGCTCACGCCGCCGCTGCCCTCAGCTaGCAGGTTCTCGATGGTGGTCACCACATGGTTCGGCGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGGGGQAHAAAALS*QVLDGGHHMVRRGR Trigger: CCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCGTGAGCCTGTCCGCCTCCTCCCGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS CCA 90 bp | CGGACAGGCTCACGCCGCCGCTGCCCTCAGCTGGCAGGTTCTCGATaGTGGTCACCACATGGTTCGGCGGGGCCGGTGGAGGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTGSRRRCPQLAGSR*WSPHGSAGPVEVVA Trigger: AGCCACCACCTCCACCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCGTGAGCCTGTCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS CCA 90 bp | ACAGGCTCACGCCGCCGCTGCCCTCAGCTGGCAGGTTCTCGATGGTaGTCACCACATGGTTCGGCGGGGCCGGTGGAGGTGGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSRRRCPQLAGSRW*SPHGSAGPVEVVAA Trigger: TGCAGCCACCACCTCCACCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCGTGAGCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS CCA 90 bp | GCCACAGAGATTAACATCTCCCTGTTCAGCACTTTGCGGATCCTCTaGCGCATGCTAGCCCGGGAGGAGGCGGACAGGCTCACGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ATEINISLFSTLRIL*RMLAREEADRLTPP Trigger: CGGCGGCGTGAGCCTGTCCGCCTCCTCCCGGGCTAGCATGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGAGATGTTAATCTCTGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS GCA 90 bp | GCCGTGCTGGGTAAGTCCACGACAGGTCCTGAAGGATTGCGGAACTaGTTGTACACTCGGGGATCCTGGGCTATGTATGTAGAGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVLGKSTTGPEGLRN*LYTRGSWAMYVEVE Trigger: CTCCACCTCTACATACATAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTTACCCAGCACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGATACACACTATCAAAACCTCTCTCTGAGTCAGGTGGATTGAAGCCTGAGAGGTGGTGGCTGCAGTaGGGGCTGCGGAGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGYTLSKPLSESGGLKPERWWLQ*GLRRLG Trigger: CCCGAGCCTCCGCAGCCCCAACTGCAGCCACCACCT...CTCAGGCTTCAATCCACCTGACTCAGAGAGAGGTTTTGATAGTGTGTATCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS TCA 90 bp | CTCCCACCATGCAGCCCATACCCAGGATGCAGACTACGATGCCGATaGAATGCACAGCCTTGTACCGGATCAGCAGGAAGAACCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPPCSPYPGCRLRCR*NAQPCTGSAGRTRR Trigger: TCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCTGGGTATGGGCTGCATGGTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTTACTATTACCCTATTCCCACTTCCCGCCCCGCTGTCAAACCACTCCCTGTTCAGCACTTaGCGGATCCTCTGGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TATVTITLFPLPAPLSNHSLFST*RILWRM Trigger: CATGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGA...GTGGTTTGACAGCGGGGCGGGAAGTGGGAATAGGGTAATAGTAACTGTAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGACACCATTAGCCACAAGGTCACCAGGATGGGCAAGCTTCTGTGGCATGTGAGCAGAGAAAGGTaGACCGAGGTGGCACTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: TEDTISHKVTRMGKLLWHVSRER*TEVALV Trigger: AACGAGTGCCACCTCGGTCAACCTTTCTCTGCTCAC...ATGCCACAGAAGCTTGCCCATCCTGGTGACCTTGTGGCTAATGGTGTCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS GCA 90 bp | ACCATGCAGCCCATACCCAGGATGCAGACTACGATGCCGATGAAATaGACAGCCTTGTACCGGATCAGCAGGAAGAACCAGGAGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TMQPIPRMQTTMPMK*TALYRISRKNQESK Trigger: TTTGCTCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCTGGGTATGGGCTGCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CAA 90 bp | GCTCACAGAAGAAGGCAGGCAAAGAGTCTGGTAGACAGCCGAAGAGCTTCTGCCACAGGTCCTGAAGGATaGCGGAACTGCTTGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: AHRRRQAKSLVDSRRASATGPEG*RNCLYT Trigger: AGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGT...GGCAGAAGCTCTTCGGCTGTCTACCAGACTCTTTGCCTGCCTTCTTCTGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS-3UTR CAA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGGGATTGCGGAACTGCTaGTACACTCGGGGATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHGTQWCELVHFLVYLYMGLRNC*YTRGSW Trigger: CCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCC...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
||
| CDS GCA 90 bp | GTTCAGAAAGCTCTGGAAGACTGGTGTGTTCGCATGAAAATCCTCTaGCAGGTACTTGCTCGTCAAGCCAATTCCACAAACGAGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VQKALEDWCVRMKIL*QVLARQANSTNEKG Trigger: TCCCTTCTCGTTTGTGGAATTGGCTTGACGAGCAAGTACCTGGCAGAGGATTTTCATGCGAACACACCAGTCTTCCAGAGCTTTCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS GCA 90 bp | TCTGGAAGACTGGTGTGTTCGCATGAAAATCCTCTGCCAGGTACTTaGTCGTCAAGCCAATTCCACAAACGAGAAGGGATAACACTTGAC | + |
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Preference number: 5 (lower is better) Translates to: SGRLVCSHENPLPGT*SSSQFHKREGITLD Trigger: GTCAAGTGTTATCCCTTCTCGTTTGTGGAATTGGCTTGACGAGCAAGTACCTGGCAGAGGATTTTCATGCGAACACACCAGTCTTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CAA 90 bp | TCTCTATGTACAATACAGATGATGGGCAAACACATGGCCTCTGAGTTGTCCTCATCCTCTGCCAGGTACTaGCTCGTCAAGCCAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLCTIQMMGKHMASELSSSSARY*LVKPIP Trigger: TGGAATTGGCTTGACGAGCAAGTACCTGGCAGAGGA...TGAGGACAACTCAGAGGCCATGTGTTTGCCCATCATCTGTATTGTACATAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CAA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAATGAAATGCACAGCCTaGTACCGGATCAGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QLLHCHSQSMGEHANRKGMKCTA*YRISRK Trigger: CTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCAT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 90 bp | GTATACCAAGAAGAGGAGGATGTAGTTCAGAAAGCTCTGGAAGACTaGTGTGTTCGCATGAAAATCCTCTGCCAGGTACTTGCTCGTCAA | + |
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Preference number: 5 (lower is better) Translates to: VYQEEEDVVQKALED*CVRMKILCQVLARQ Trigger: TTGACGAGCAAGTACCTGGCAGAGGATTTTCATGCGAACACACCAGTCTTCCAGAGCTTTCTGAACTACATCCTCCTCTTCTTGGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS TCA 90 bp | TACTTGCTCGTCAAGCCAATTCCACAAACGAGAAGGGATAACACTTaGCCCAAAGCCACAGAGATTAACATCTCCCTGTTCAGCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: YLLVKPIPQTRRDNT*PKATEINISLFSTL Trigger: CAAAGTGCTGAACAGGGAGATGTTAATCTCTGTGGCTTTGGGTCAAGTGTTATCCCTTCTCGTTTGTGGAATTGGCTTGACGAGCAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CAA 90 bp | CAGTTGTTACATTGCCACAGCCAGTCCATGGGGGAACATGCAAATAGAAAAGGAATCTTCGTCGTAAAATaGCCAGGAGGTTTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QLLHCHSQSMGEHANRKGIFVVK*PGGFLL Trigger: GAGAAGAAAACCTCCTGGCAATTTTACGACGAAGAT...TCCTTTTCTATTTGCATGTTCCCCCATGGACTGGCTGTGGCAATGTAACAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CAA 90 bp | CTTCATGGGACACAGTGGTGCGAACTTGTCCATTTCTTGGTCTACCTGTATATGACCTTTAACAGTTCCTaGTGTTCCATGATGGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: LHGTQWCELVHFLVYLYMTFNSS*CSMMAN Trigger: ATTAGCCATCATGGAACACAAGGAACTGTTAAAGGT...CATATACAGGTAGACCAAGAAATGGACAAGTTCGCACCACTGTGTCCCATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS-3UTR CAA 90 bp | AAACCACAGTCATTAAGGGTCTTCAGATCTGAATGGACAAAATATTCAGAGAAAATTCTTCCCAGACATTaGAGATCCCGTACAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: KPQSLRVFRSEWTKYSEKILPRH*RSRTGW Trigger: CCACCCTGTACGGGATCTCAAATGTCTGGGAAGAAT...TTTCTCTGAATATTTTGTCCATTCAGATCTGAAGACCCTTAATGACTGTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | CGCCGCCGCTGCCCTCAGCTGGCAGGTTCTCGATGGTaGTCACCACATGGTTCGGCGGGGCCGGTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRRCPQLAGSRW*SPHGSAGPVEV Trigger: CACCTCCACCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | TCACGCCGCCGCTGCCCTCAGCTGGCAGGTTCTCGATaGTGGTCACCACATGGTTCGGCGGGGCCGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SRRRCPQLAGSR*WSPHGSAGPVE Trigger: CTCCACCGGCCCCGCCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | GGAGGCGGACAGGCTCACGCCGCCGCTGCCCTCAGCTaGCAGGTTCTCGATGGTGGTCACCACATGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: GGGQAHAAAALS*QVLDGGHHMVR Trigger: CCGAACCATGTGGTGACCACCATCGAGAACCTGCCAGCTGAGGGCAGCGGCGGCGTGAGCCTGTCCGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | ATTAACATCTCCCTGTTCAGCACTTTGCGGATCCTCTaGCGCATGCTAGCCCGGGAGGAGGCGGACAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: INISLFSTLRIL*RMLAREEADRL Trigger: GAGCCTGTCCGCCTCCTCCCGGGCTAGCATGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGAGATGTTAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 72 bp | GCCGTGCTGGGTAAGTCCACGACAGGTCCTGAAGGATaGCGGAACTGCTTGTACACTCGGGGATCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVLGKSTTGPEG*RNCLYTRGSWA Trigger: AGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTTACCCAGCACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS GCA 72 bp | CCGTGCTGGGTAAGTCCACGACAGGTCCTGAAGGATTaGGGAACTGCTTGTACACTCGGGGATCCTGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PCWVSPRQVLKD*GTACTLGDPGL Trigger: TAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTTACCCAGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 72 bp | AAAGCCACAGAGATTAACATCTCCCTGTTCAGCACTTaGCGGATCCTCTGGCGCATGCTAGCCCGGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KATEINISLFST*RILWRMLAREE Trigger: CTCCTCCCGGGCTAGCATGCGCCAGAGGATCCGCAAAGTGCTGAACAGGGAGATGTTAATCTCTGTGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 90 bp | GTGCTGGGTAAGTCCACGACAGGTCCTGAAGGATTGCGGAACTGCTaGTACACTCGGGGATCCTGGGCTATGTATGTAGAGGTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VLGKSTTGPEGLRNC*YTRGSWAMYVEVEE Trigger: TTCCTCCACCTCTACATACATAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTTACCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS TCA 72 bp | TGCAGCCCATACCCAGGATGCAGACTACGATGCCGATaGAATGCACAGCCTTGTACCGGATCAGCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CSPYPGCRLRCR*NAQPCTGSAGR Trigger: TCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCTGGGTATGGGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS GCA 72 bp | CCCATACCCAGGATGCAGACTACGATGCCGATGAAATaGACAGCCTTGTACCGGATCAGCAGGAAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: PIPRMQTTMPMK*TALYRISRKNQ Trigger: CTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCTGGGTATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 90 bp | CCCATACCCAGGATGCAGACTACGATGCCGATGAAATGCACAGCCTaGTACCGGATCAGCAGGAAGAACCAGGAGAGCAAAATCACCACC | + |
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Preference number: 6 (lower is better) Translates to: PIPRMQTTMPMKCTA*YRISRKNQESKITT Trigger: GGTGGTGATTTTGCTCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCTGGGTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS GCA 72 bp | GGTAAGTCCACGACAGGTCCTGAAGGATTGCGGAACTaGTTGTACACTCGGGGATCCTGGGCTATGTATGTA | + |
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Preference number: 6 (lower is better) Translates to: GKSTTGPEGLRN*LYTRGSWAMYV Trigger: TACATACATAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | GAAGGATTGCGGAACTGCTTGTACACTCGGGGATCCTaGGCTATGTATGTAGAGGTGGAGGAATACAGCACC | + |
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Preference number: 6 (lower is better) Translates to: EGLRNCLYTRGS*AMYVEVEEYST Trigger: GGTGCTGTATTCCTCCACCTCTACATACATAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 72 bp | AAGTCCACGACAGGTCCTGAAGGATTGCGGAACTGCTaGTACACTCGGGGATCCTGGGCTATGTATGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: KSTTGPEGLRNC*YTRGSWAMYVE Trigger: CTCTACATACATAGCCCAGGATCCCCGAGTGTACAAGCAGTTCCGCAATCCTTCAGGACCTGTCGTGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 72 bp | AGGATGCAGACTACGATGCCGATGAAATGCACAGCCTaGTACCGGATCAGCAGGAAGAACCAGGAGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RMQTTMPMKCTA*YRISRKNQESK Trigger: TTTGCTCTCCTGGTTCTTCCTGCTGATCCGGTACAAGGCTGTGCATTTCATCGGCATCGTAGTCTGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS GCA 72 bp | GCTCTGGAAGACTGGTGTGTTCGCATGAAAATCCTCTaGCAGGTACTTGCTCGTCAAGCCAATTCCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: ALEDWCVRMKIL*QVLARQANSTN Trigger: GTTTGTGGAATTGGCTTGACGAGCAAGTACCTGGCAGAGGATTTTCATGCGAACACACCAGTCTTCCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | CCAGGAGGTTTTCTTCTCCTTGTCGGACAGCTAGGGTaGTGGTGTATACCAAGAAGAGGAGGATGTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGGFLLLVGQLG*WCIPRRGGCSS Trigger: TGAACTACATCCTCCTCTTCTTGGTATACACCACCACCCTAGCTGTCCGACAAGGAGAAGAAAACCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | GGAGGTTTTCTTCTCCTTGTCGGACAGCTAGGGTGGTaGTGTATACCAAGAAGAGGAGGATGTAGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GGFLLLVGQLGW*CIPRRGGCSSE Trigger: TTCTGAACTACATCCTCCTCTTCTTGGTATACACCACCACCCTAGCTGTCCGACAAGGAGAAGAAAACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CCA 72 bp | GAAGAGGAGGATGTAGTTCAGAAAGCTCTGGAAGACTaGTGTGTTCGCATGAAAATCCTCTGCCAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: EEEDVVQKALED*CVRMKILCQVL Trigger: AAGTACCTGGCAGAGGATTTTCATGCGAACACACCAGTCTTCCAGAGCTTTCTGAACTACATCCTCCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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| CDS CAA 72 bp | CAAGGATCATATACTTCCACCATCTTCGTCGTAAAATaGCCAGGAGGTTTTCTTCTCCTTGTCGGACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: QGSYTSTIFVVK*PGGFLLLVGQL Trigger: TAGCTGTCCGACAAGGAGAAGAAAACCTCCTGGCAATTTTACGACGAAGATGGTGGAAGTATATGATCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105473.3 |
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