Pregenerated sensors for SLC35E4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048807Ensembl transcript IDs: ENSMUST00000051207.2, ENSMUST00000109995.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTaGGGCAAGCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PDLDPPSSGRVCCER*GKQGQEVGLSQSPW Trigger: CCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGCTTGCCTCACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR CCA 90 bp | ATAGTCGTTGACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTaGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IVVDTGSSGKHTCQT*THHPVAGFAVRGEA Trigger: TGCCTCACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAACGACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR TCA 90 bp | TTATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTaGAGCCGCAGTAGCTACCTGAAGTTGGCACAGGCTACCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LLGMEGPNPGVEAPE*SRSSYLKLAQATSS Trigger: AGATGAGGTAGCCTGTGCCAACTTCAGGTAGCTACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR GCA 90 bp | ACCTTCATCATAGTCGTTGACACTGGTTCCTCTGGCAAGCACACGTaGCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: TFIIVVDTGSSGKHT*QTWTHHPVAGFAVR Trigger: TCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAACGACTATGATGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCGTTTGCTGTGAGAGGTaGGGCAAGCAGGGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GEPSHDEACSGDPHSLHFVCCER*GKQGQE Trigger: CTCCTGTCCCTGCTTGCCTCACCTCTCACAGCAAAC...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCCTTCCAGAAGGTaGCTTCTCTCCTGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGSPSRR*LLSWAW Trigger: CCAGGCCCAGGAGAGAAGGCACCTTCTGGAAGGGCT...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTACGAAGCCTGCTCTGGTaGCCCTCACAGCCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVRSLLW*PSQPPL Trigger: AAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCG...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCATGGCAGGGTTTGCTGTaGGAGGTGAGGCAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YWGWKAQIQGWRHQSEAAWQGLL*EVRQAG Trigger: CCCTGCTTGCCTCACCTCTCACAGCAAACCCTGCCA...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAAGCCCTTCCAGAAGGTaGCTTCTCTCCTGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: YWGWKAQIQGWRHQSEAASPSRR*LLSWAW Trigger: CCAGGCCCAGGAGAGAAGGCACCTTCTGGAAGGGCT...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTATTCATCCTAACACTTTaGGGTTCCCTAAGTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVFILTL*GSLSLP Trigger: GGGCAAACTTAGGGAACCTCAAAGTGTTAGGATGAA...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR-3UTR CAA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGCACACGTGCCAGACTaGGACCCACCATCCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: YWGWKAQIQGWRHQSEAAAHVPD*DPPSSG Trigger: GCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGC...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR CCA 72 bp | AAGCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTaGTGTGTAGCCTCCCAGGCAGCCCTTCCAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: KQGQEVGLSQSP*CVASQAALPEG Trigger: ACCTTCTGGAAGGGCTGCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR CCA 72 bp | GACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTaGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: DTGSSGKHTCQT*THHPVAGFAVR Trigger: TCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR GCA 72 bp | ATAGTCGTTGACACTGGTTCCTCTGGCAAGCACACGTaGCAGACTTGGACCCACCATCCAGTGGCAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IVVDTGSSGKHT*QTWTHHPVAGF Trigger: AAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAACGACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR TCA 72 bp | TCCCTAAGTTTGCCCAGCAACCTTCATCATAGTCGTTaGCACTGGTTCCTCTGGCAAGCACACGTGCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: SLSLPSNLHHSR*HWFLWQAHVPD Trigger: GTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAACGACTATGATGAAGGTTGCTGGGCAAACTTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCCTTCCCGACGGTGGATGCTGTaGGGCACGGGGCGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGGSLSKSLVCSLPGSPSRRWML*GTGRWA Trigger: GGCCCAGCGCCCCGTGCCGCACAGCATCCACCGTCG...GGAAGGGCTGCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTCGACGGTGGATGCTGTaGGGCACGGGGCGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VPLASTRARLGPTIQWQGRRWML*GTGRWA Trigger: GGCCCAGCGCCCCGTGCCGCACAGCATCCACCGTCG...ACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCGGGCGGCCATGCTCCTaGGCACTTCCAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFGRPCS*ALPATA Trigger: TGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCC...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCTGCTCAGGCCCACGTTaGCGCACGCCATGGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFCSGPR*RTPWRY Trigger: GTACCTCCATGGCGTGCGGCAACGTGGGCCTGAGCA...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCCTTCCGGTCCAAGGGGACAGTaGTCAGGCCCACGTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GGGSLSKSLVCSLPGSPSGPRGQ*SGPRCR Trigger: GCGGCAACGTGGGCCTGAGCACTGTCCCCTTGGACC...GGAAGGGCTGCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCCAGCATGTGCAGTGCTaGAAGCAGCAGGGGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGQHVQC*KQQGPS Trigger: GGACGGCCCCTGCTGCTTTCAGCACTGCACATGCTG...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTACTCGCCGGAGCAGGCTaGCCAAGGACCTGGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVLAGAG*PRTWGL Trigger: CAAACCCCAGGTCCTTGGGCAGCCTGCTCCGGCGAG...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTAGGGCGGCCATGCTCCTaGGCACTTCCAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVGRPCS*ALPATA Trigger: TGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCC...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCTCGCAGACAGGTaGCCACCAGCAAGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGSLADR*PPARSR Trigger: GCGGCTTCTTGCTGGTGGCCACCTGTCTGCGAGGCT...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCGCACCAGTGCTGCACTaGCCAGCAGGCAGAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFAPVLH*PAGRNW Trigger: CCAGTTTCTGCCTGCTGGCCAGTGCAGCACTGGTGC...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTAAGAGGCGAGAGTCAGTaGGAGGCAGCGGTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVRGESQ*EAAVGL Trigger: CAGCCCCACCGCTGCCTCCCACTGACTCTCGCCTCT...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCAGAGGCGAGAGTCAGTaGGAGGCAGCGGTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWQAHVPDLDPPSSGRVCRGESQ*EAAVGL Trigger: CAGCCCCACCGCTGCCTCCCACTGACTCTCGCCTCT...GCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCCCACTTGTTGAGGCTTaGCATGCTGGCTCCCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFPLVEA*HAGSRQ Trigger: TTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGG...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | GTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTCAGCATGTGCAGTGCTaGAAGCAGCAGGGGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VPLASTRARLGPTIQWQGQHVQC*KQQGPS Trigger: GGACGGCCCCTGCTGCTTTCAGCACTGCACATGCTG...ACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCGCGGCTGCCAGCATGTaGAGTGCTGAAAGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGAAASM*SAESSR Trigger: CCTGCTGCTTTCAGCACTGCACATGCTGGCAGCCGC...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGGTCCAAGGGGACAGTaGTCAGGCCCACGTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YWGWKAQIQGWRHQSEAAGPRGQ*SGPRCR Trigger: GCGGCAACGTGGGCCTGAGCACTGTCCCCTTGGACC...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCGTCATCATGCCTTCATaGTGCTCCAGTGGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFVIMPS*CSSGQR Trigger: CCGCTGCCCACTGGAGCACCATGAAGGCATGATGAC...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCGGCAGAGCGGGCCCATaGCAGCAAACTGCAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGGRAGP*QQTAED Trigger: ATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCC...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCCAGACAAGGCCATTGTaGACAGTGGTGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFQTRPL*TVVWWW Trigger: CCACCACCACACCACTGTTCACAATGGCCTTGTCTG...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | CACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTTGCTCAGGCCCACGTTaGCGCACGCCATGGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HTCQTWTHHPVAGFAVRGCSGPR*RTPWRY Trigger: GTACCTCCATGGCGTGCGGCAACGTGGGCCTGAGCA...ACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCCCCATGGCAGCAAACTaGAGAGGATGGTGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFPMAAN*RGWCLR Trigger: CCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGG...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCCTTCCGTCATCATGCCTTCATaGTGCTCCAGTGGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GGGSLSKSLVCSLPGSPSVIMPS*CSSGQR Trigger: CCGCTGCCCACTGGAGCACCATGAAGGCATGATGAC...GGAAGGGCTGCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCACAGTGGTGTGGTGGTaGTGGCCAGCTGTGCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGTVVWW*WPAVLG Trigger: ACCTAGCACAGCTGGCCACCACCACCACACCACTGT...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTAGCACCAGTGCTGCACTaGCCAGCAGGCAGAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVAPVLH*PAGRNW Trigger: CCAGTTTCTGCCTGCTGGCCAGTGCAGCACTGGTGC...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | CTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCATCATGCCTTCATGGTaGTCCAGTGGGCAGCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LWQAHVPDLDPPSSGRVCIMPSW*SSGQRH Trigger: GTGCCGCTGCCCACTGGAGCACCATGAAGGCATGAT...GCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCCGGCTGAGGTCATCATaGCTTCATGGTGCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGRLRSS*LHGAPV Trigger: CACTGGAGCACCATGAAGGCATGATGACCTCAGCCG...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCAGCCCTTCCGGCCGTCCGAAGCCATaGACTGTGAAGATCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GGGSLSKSLVCSLPGSPSGRPKP*TVKIHL Trigger: CAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCC...GGAAGGGCTGCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGGTGTGGTGGTGGTaGCCAGCTGTGCTAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGKHTCQTWTHHPVAGFAVVWWW*PAVLGP Trigger: TGGACCTAGCACAGCTGGCCACCACCACCACACCAC...AGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TTGACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGAGCCTCGCAGACAGGTaGCCACCAGCAAGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LTLVPLASTRARLGPTIQSLADR*PPARSR Trigger: GCGGCTTCTTGCTGGTGGCCACCTGTCTGCGAGGCT...CTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | GTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTCCAGCAAGGAGAAGCTaGCCAGGTTGTAGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLASTRARLGPTIQWQGPARRS*PGCRPR Trigger: CCGTGGTCTACAACCTGGCCAGCTTCTCCTTGCTGG...ACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCAGACCTTTGCCAGGCTaGTCCCTGTTCCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWQAHVPDLDPPSSGRVCRPLPG*SLFHNP Trigger: GGGGTTGTGGAACAGGGACCAGCCTGGCAAAGGTCT...GCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | CACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTCCACTTGTTGAGGCTTaGCATGCTGGCTCCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCQTWTHHPVAGFAVRGPLVEA*HAGSRQ Trigger: TTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGG...ACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | CACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTATCATGCCTTCATGGTaGTCCAGTGGGCAGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTCQTWTHHPVAGFAVRGIMPSW*SSGQRH Trigger: GTGCCGCTGCCCACTGGAGCACCATGAAGGCATGAT...ACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTCGGCTGAGGTCATCATaGCTTCATGGTGCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPLASTRARLGPTIQWQGRLRSS*LHGAPV Trigger: CACTGGAGCACCATGAAGGCATGATGACCTCAGCCG...ACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTAGGCCGTCCGAAGCCATaGACTGTGAAGATCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVGRPKP*TVKIHL Trigger: CAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCC...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCAGGTTGCCCAGTACGTaGACAGTGAGGGCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWQAHVPDLDPPSSGRVCRLPST*TVRADV Trigger: CACATCTGCCCTCACTGTCCACGTACTGGGCAACCT...GCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | CACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTGAGAGGTAGACCTTTGCCAGGCTaGTCCCTGTTCCACAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTCQTWTHHPVAGFAVRGRPLPG*SLFHNP Trigger: GGGGTTGTGGAACAGGGACCAGCCTGGCAAAGGTCT...ACCTCTCACAGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TTGACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGACAGTGGTGTGGTGGTaGTGGCCAGCTGTGCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLVPLASTRARLGPTIQTVVWW*WPAVLG Trigger: ACCTAGCACAGCTGGCCACCACCACCACACCACTGT...CTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTAGGTTGCCCAGTACGTaGACAGTGAGGGCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKHTCQTWTHHPVAGFARLPST*TVRADV Trigger: CACATCTGCCCTCACTGTCCACGTACTGGGCAACCT...AGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | TGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCAGTAAGCAGAGCACTTTGTTaGACAGACTTGAAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WGWKAQIQGWRHQSEAAVSRALC*TDLKPR Trigger: GCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCT...TACTGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCCAGCCATGACGAAGCCTGCTCTGGTGACCCTCACAGCCTCCACTTCATAAAGAAACATTCCTaGAAGGGTGAGGGTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEPSHDEACSGDPHSLHFIKKHS*KGEGDA Trigger: GGCATCACCCTCACCCTTTCAGGAATGTTTCTTTAT...GAAGTGGAGGCTGTGAGGGTCACCAGAGCAGGCTTCGTCATGGCTGGGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCAGCGGCTGCCAGCATGTaGAGTGCTGAAAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPAAASM*SAESSR Trigger: CCTGCTGCTTTCAGCACTGCACATGCTGGCAGCCGC...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCAGGCAGAGCGGGCCCATaGCAGCAAACTGCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPGRAGP*QQTAED Trigger: ATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCC...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCAGGCCATTGTGAACAGTaGTGTGGTGGTGGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPGHCEQ*CGGGGQ Trigger: CTGGCCACCACCACCACACCACTGTTCACAATGGCC...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TTGACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGAACTGGGCAAAGAAGTaGCATACAGCAGGGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLVPLASTRARLGPTIQNWAKK*HTAGSP Trigger: CGGTGACCCTGCTGTATGCCACTTCTTTGCCCAGTT...CTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCACCAGCAAGGAGAAGCTaGCCAGGTTGTAGACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPPARRS*PGCRPR Trigger: CCGTGGTCTACAACCTGGCCAGCTTCTCCTTGCTGG...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCACCCATGGCAGCAAACTaGAGAGGATGGTGTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPPMAAN*RGWCLR Trigger: CCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGG...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR GCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCATCCAGCCTCTCTTCTTaGAGCAGAGCACCACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPSSLSS*SRAPLC Trigger: ACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGA...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS-3UTR TCA 90 bp | TCTCCCTTTCCTCATGGCCATTGTCCAAGGTTAGATTCAGGCAGGGGCTGTCCAATAAAGAAACATTCCTaGAAGGGTGAGGGTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFPHGHCPRLDSGRGCPIKKHS*KGEGDA Trigger: GGCATCACCCTCACCCTTTCAGGAATGTTTCTTTAT...TGGACAGCCCCTGCCTGAATCTAACCTTGGACAATGGCCATGAGGAAAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| 3UTR CAA 72 bp | TGTGTGACTACCGAGCATTGTCTTCATCCTAACACTTaGAGGTTCCCTAAGTTTGCCCAGCAACCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CVTTEHCLHPNT*RFPKFAQQPSS Trigger: TGATGAAGGTTGCTGGGCAAACTTAGGGAACCTCAAAGTGTTAGGATGAAGACAATGCTCGGTAGTCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 90 bp | AACAGCCACACCAGTGCTGCCACAACCACTCTCGCCGGAGCAGGCTaGCCAAGGACCTGGGGTTTGTCCGGAGGCCACTTGGGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSHTSAATTTLAGAG*PRTWGLSGGHLGRP Trigger: TGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCAGCCTGCTCCGGCGAGAGTGGTTGTGGCAGCACTGGTGTGGCTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 90 bp | CCGGAGCAGGCTGCCCAAGGACCTGGGGTTTGTCCGGAGGCCACTTaGGGCGGCCATGCTCCTGGGCACTTCCAGCCACAGCAACTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PEQAAQGPGVCPEAT*GGHAPGHFQPQQLL Trigger: AAGCAGTTGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCAGCCTGCTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 90 bp | TGCCCAAGGACCTGGGGTTTGTCCGGAGGCCACTTGGGGCGGCCATaGTCCTGGGCACTTCCAGCCACAGCAACTGCTTCGGCTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPRTWGLSGGHLGRP*SWALPATATASAEV Trigger: GACCTCAGCCGAAGCAGTTGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCCCAAGGACCTGGGGTTaGTCCGGAGGCCACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGPRTWG*SGGHLG Trigger: CCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGG...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 90 bp | AGGACCTGGGGTTTGTCCGGAGGCCACTTGGGGCGGCCATGCTCCTaGGCACTTCCAGCCACAGCAACTGCTTCGGCTGAGGTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RTWGLSGGHLGRPCS*ALPATATASAEVIM Trigger: CATGATGACCTCAGCCGAAGCAGTTGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 90 bp | GCTCTCCAGCCAGACTACATGCAGCCCCTAGGCAGAGCGGGCCCATaGCAGCAAACTGCAGAGGATGGTGTCTTCGGCCAAGCAGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: ALQPDYMQPLGRAGP*QQTAEDGVFGQAAT Trigger: CGTTGCTGCTTGGCCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCCTAGGGGCTGCATGTAGTCTGGCTGGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CAA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCACCAAGGACCTGGGGTTaGTCCGGAGGCCACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YWGWKAQIQGWRHQSEAAPRTWG*SGGHLG Trigger: CCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGG...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 90 bp | AGACTACATGCAGCCCCTAGGCAGAGCGGGCCCATGGCAGCAAACTaGAGAGGATGGTGTCTTCGGCCAAGCAGCAACGCAGACAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHAAPRQSGPMAAN*RGWCLRPSSNADKA Trigger: GGCCTTGTCTGCGTTGCTGCTTGGCCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCCTAGGGGCTGCATGTAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 90 bp | GCAGCCCCTAGGCAGAGCGGGCCCATGGCAGCAAACTGCAGAGGATaGTGTCTTCGGCCAAGCAGCAACGCAGACAAGGCCATTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAPRQSGPMAANCRG*CLRPSSNADKAIVN Trigger: GTTCACAATGGCCTTGTCTGCGTTGCTGCTTGGCCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCCTAGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS TCA 90 bp | GGGCCGTCCGAAGCCATGCACTGTGAAGATCCACTTGTTGAGGCTTaGCATGCTGGCTCCCGCCAACAGCCACACCAGTGCTGCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPSEAMHCEDPLVEA*HAGSRQQPHQCCHN Trigger: GTTGTGGCAGCACTGGTGTGGCTGTTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS TCA 90 bp | GAGGATGGTGTCTTCGGCCAAGCAGCAACGCAGACAAGGCCATTGTaGACAGTGGTGTGGTGGTGGTGGCCAGCTGTGCTAGGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EDGVFGQAATQTRPL*TVVWWWWPAVLGPR Trigger: CCTTGGACCTAGCACAGCTGGCCACCACCACCACACCACTGTTCACAATGGCCTTGTCTGCGTTGCTGCTTGGCCGAAGACACCATCCTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 90 bp | GCCAGCATGTGCAGTGCTGAAAGCAGCAGGGGCCGTCCGAAGCCATaGACTGTGAAGATCCACTTGTTGAGGCTTGACATGCTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASMCSAESSRGRPKP*TVKIHLLRLDMLAP Trigger: GGGAGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCCCCTGCTGCTTTCAGCACTGCACATGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 90 bp | GCACCAGTGCTGCACTGGCCAGCAGGCAGAAACTGGGCAAAGAAGTaGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTTCTTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: APVLHWPAGRNWAKK*HTAGSPCPASLLAA Trigger: TGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTGTATGCCACTTCTTTGCCCAGTTTCTGCCTGCTGGCCAGTGCAGCACTGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCGTGAAGATCCACTTGTaGAGGCTTGACATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGVKIHL*RLDMLA Trigger: AGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCAC...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGACAGGAGGTGGGTCTCTCTCAAAGTCCCTGGTGTGTAGCCTCCCAGGCCAGCAGAGCACTTTGTaGAACAGACTTGAAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGTGGGSLSKSLVCSLPGQQSTL*NRLEAS Trigger: CGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTG...GCCTGGGAGGCTACACACCAGGGACTTTGAGAGAGACCCACCTCCTGTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS-3UTR CAA 90 bp | GTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTGTGAAGATCCACTTGTaGAGGCTTGACATGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLASTRARLGPTIQWQGVKIHL*RLDMLA Trigger: AGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCAC...ACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGTGGCAGGGTTTGCTGTCCAGCCTCTCTTCTaGCAGCAGAGCACTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGKHTCQTWTHHPVAGFAVQPLF*QQSTLL Trigger: CAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGAC...AGCAAACCCTGCCACTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
||
| CDS TCA 90 bp | TGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTTGTTGAACAGACTTaGAGCCTCGCAGACAGGTGGCCACCAGCAAGAAGCCGCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPASLLAAEHFVEQT*SLADRWPPARSRNQ Trigger: CTGGTTGCGGCTTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
||
| CDS TCA 90 bp | AGGGTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTTGTTaGACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVTVSSLSSCSRALC*TDLKPRRQVATSKK Trigger: CTTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
||
| CDS TCA 90 bp | GTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACCACTTTGTTaGACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTVSSLSSCSRAPLC*TDLKPRRQVATSKK Trigger: CTTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
||
| CDS-3UTR CAA 90 bp | TATTGGGGATGGAAGGCCCAAATCCAGGGGTGGAGGCACCAGAGTGAAGCCGCATTGCAGCAGAGCACTTaGTTGAACAGACTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YWGWKAQIQGWRHQSEAALQQST*LNRLEA Trigger: GGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAA...TGCGGCTTCACTCTGGTGCCTCCACCCCTGGATTTGGGCCTTCCATCCCCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
||
| CDS-3UTR CAA 90 bp | TTGACACTGGTTCCTCTGGCAAGCACACGTGCCAGACTTGGACCCACCATCCAGACTGTGAAGATCCACTaGTTGAGGCTTGACATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLVPLASTRARLGPTIQTVKIH*LRLDML Trigger: CAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGT...CTGGATGGTGGGTCCAAGTCTGGCACGTGTGCTTGCCAGAGGAACCAGTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | GCCGGAGCAGGCTGCCCAAGGACCTGGGGTTTGTCCGGAGGCCACTaGGGGCGGCCATGCTCCTGGGCACTTCCAGCCACAGCAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGAGCPRTWGLSGGH*GRPCSWALPATATA Trigger: AGCAGTTGCTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCAGCCTGCTCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 72 bp | GCTGCCCAAGGACCTGGGGTTTGTCCGGAGGCCACTTaGGGCGGCCATGCTCCTGGGCACTTCCAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: AAQGPGVCPEAT*GGHAPGHFQPQ Trigger: CTGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | GGCTGCCCAAGGACCTGGGGTTTGTCCGGAGGCCACTaGGGGCGGCCATGCTCCTGGGCACTTCCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GCPRTWGLSGGH*GRPCSWALPAT Trigger: TGTGGCTGGAAGTGCCCAGGAGCATGGCCGCCCCAAGTGGCCTCCGGACAAACCCCAGGTCCTTGGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 72 bp | GGTGGCCACCAGCAAGAAGCCGCAACCAGCTGGAGGTaGCCGGAGCTCTCCAGCCAGACTACATGCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GGHQQEAATSWR*PELSSQTTCSP Trigger: GGGGCTGCATGTAGTCTGGCTGGAGAGCTCCGGGCACCTCCAGCTGGTTGCGGCTTCTTGCTGGTGGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | GTGGCCAGCTGTGCTAGGTCCAAGGGGACAGTGCTCAGGCCCACGTaGCCGCACGCCATGGAGGTACCGAAGGTGAGGCTGAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VASCARSKGTVLRPT*PHAMEVPKVRLSSS Trigger: GCTGCTGCTCAGCCTCACCTTCGGTACCTCCATGGCGTGCGGCAACGTGGGCCTGAGCACTGTCCCCTTGGACCTAGCACAGCTGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS TCA 72 bp | GTGGCATGCCAGGGCGGCTGCCAGCATGTGCAGTGCTaGAAGCAGCAGGGGCCGTCCGAAGCCATGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VACQGGCQHVQC*KQQGPSEAMHC Trigger: ACAGTGCATGGCTTCGGACGGCCCCTGCTGCTTTCAGCACTGCACATGCTGGCAGCCGCCCTGGCATGCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 72 bp | TGGTGGTGGCCAGCTGTGCTAGGTCCAAGGGGACAGTaGTCAGGCCCACGTTGCCGCACGCCATGGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: WWWPAVLGPRGQ*SGPRCRTPWRY Trigger: GTACCTCCATGGCGTGCGGCAACGTGGGCCTGAGCACTGTCCCCTTGGACCTAGCACAGCTGGCCACCACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | AGCGCGCTGAGGTGGCTGCCGAACAGGAGCCGGGACAGGATGAGGTaGCCCACGACCATGAGGTTGCCCAGTACGTGGACAGTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SALRWLPNRSRDRMR*PTTMRLPSTWTVRA Trigger: TGCCCTCACTGTCCACGTACTGGGCAACCTCATGGTCGTGGGCAACCTCATCCTGTCCCGGCTCCTGTTCGGCAGCCACCTCAGCGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS GCA 72 bp | GCAGCCCCTAGGCAGAGCGGGCCCATGGCAGCAAACTaGAGAGGATGGTGTCTTCGGCCAAGCAGCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: AAPRQSGPMAAN*RGWCLRPSSNA Trigger: TGCGTTGCTGCTTGGCCGAAGACACCATCCTCTGCAGTTTGCTGCCATGGGCCCGCTCTGCCTAGGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 72 bp | CAGACAGGTGGCCACCAGCAAGAAGCCGCAACCAGCTaGAGGTGCCCGGAGCTCTCCAGCCAGACTACATGC | + |
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Preference number: 6 (lower is better) Translates to: QTGGHQQEAATS*RCPELSSQTTC Trigger: GCATGTAGTCTGGCTGGAGAGCTCCGGGCACCTCCAGCTGGTTGCGGCTTCTTGCTGGTGGCCACCTGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | TGTGCTAGGTCCAAGGGGACAGTGCTCAGGCCCACGTaGCCGCACGCCATGGAGGTACCGAAGGTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CARSKGTVLRPT*PHAMEVPKVRL Trigger: CAGCCTCACCTTCGGTACCTCCATGGCGTGCGGCAACGTGGGCCTGAGCACTGTCCCCTTGGACCTAGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | CCGAACAGGAGCCGGGACAGGATGAGGTTGCCCACGACCATGAGGTaGCCCAGTACGTGGACAGTGAGGGCAGATGTGAGGGCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PNRSRDRMRLPTTMR*PSTWTVRADVRASK Trigger: CTTGCTGGCCCTCACATCTGCCCTCACTGTCCACGTACTGGGCAACCTCATGGTCGTGGGCAACCTCATCCTGTCCCGGCTCCTGTTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | AGGTGGCTGCCGAACAGGAGCCGGGACAGGATGAGGTaGCCCACGACCATGAGGTTGCCCAGTACGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: RWLPNRSRDRMR*PTTMRLPSTWT Trigger: TGTCCACGTACTGGGCAACCTCATGGTCGTGGGCAACCTCATCCTGTCCCGGCTCCTGTTCGGCAGCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | AGCCGGGACAGGATGAGGTTGCCCACGACCATGAGGTaGCCCAGTACGTGGACAGTGAGGGCAGATGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRDRMRLPTTMR*PSTWTVRADVR Trigger: CCTCACATCTGCCCTCACTGTCCACGTACTGGGCAACCTCATGGTCGTGGGCAACCTCATCCTGTCCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | AGCAGCAGGGGCCGTCCGAAGCCATGCACTGTGAAGATCCACTTGTaGAGGCTTGACATGCTGGCTCCCGCCAACAGCCACACCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRGRPKPCTVKIHL*RLDMLAPANSHTSA Trigger: AGCACTGGTGTGGCTGTTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCCCCTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | GGCCGTCCGAAGCCATGCACTGTGAAGATCCACTTGTaGAGGCTTGACATGCTGGCTCCCGCCAACAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GRPKPCTVKIHL*RLDMLAPANSH Trigger: GTGGCTGTTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CCA 72 bp | CTGCACTGGCCAGCAGGCAGAAACTGGGCAAAGAAGTaGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LHWPAGRNWAKK*HTAGSPCPASL Trigger: AAGAGAGGCTGGACACGGTGACCCTGCTGTATGCCACTTCTTTGCCCAGTTTCTGCCTGCTGGCCAGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | CAGCAGGGTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTaGTTGAACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: QQGHRVQPLFLQQST*LNRLEASQTGGHQQ Trigger: TTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS CAA 90 bp | CAGGGTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACCACTTaGTTGAACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: QGHRVQPLFLQQSTT*LNRLEASQTGGHQQ Trigger: TTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS TCA 72 bp | GAAGCCATGCACTGTGAAGATCCACTTGTTGAGGCTTaGCATGCTGGCTCCCGCCAACAGCCACACCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: EAMHCEDPLVEA*HAGSRQQPHQC Trigger: GCACTGGTGTGGCTGTTGGCGGGAGCCAGCATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 90 bp | CAGGGTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTTGTaGAACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: QGHRVQPLFLQQSTL*NRLEASQTGGHQQE Trigger: TTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS CAA 90 bp | GGTCACCGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACCACTTTGTaGAACAGACTTGAAGCCTCGCAGACAGGTGGCCACCAGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GHRVQPLFLQQSTTL*NRLEASQTGGHQQE Trigger: TTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS TCA 72 bp | GTGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTTGTTaGACAGACTTGAAGCCTCGCAGACAGGTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: VSSLSSCSRALC*TDLKPRRQVAT Trigger: GGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS TCA 72 bp | TCCAGCCTCTCTTCTTGCAGCAGAGCACCACTTTGTTaGACAGACTTGAAGCCTCGCAGACAGGTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SSLSSCSRAPLC*TDLKPRRQVAT Trigger: GGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS GCA 72 bp | TGCAGTGCTGAAAGCAGCAGGGGCCGTCCGAAGCCATaGACTGTGAAGATCCACTTGTTGAGGCTTGACATG | + |
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Preference number: 6 (lower is better) Translates to: CSAESSRGRPKP*TVKIHLLRLDM Trigger: CATGTCAAGCCTCAACAAGTGGATCTTCACAGTGCATGGCTTCGGACGGCCCCTGCTGCTTTCAGCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | CGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACTTTGTaGAACAGACTTGAAGCCTCGCAGACAGGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RVQPLFLQQSTL*NRLEASQTGGH Trigger: GTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS CAA 72 bp | CGTGTCCAGCCTCTCTTCTTGCAGCAGAGCACCACTTaGTTGAACAGACTTGAAGCCTCGCAGACAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RVQPLFLQQSTT*LNRLEASQTGG Trigger: GCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS CAA 72 bp | GGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTTCTaGCAGCAGAGCACTTTGTTGAACAGACTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GIQQGHRVQPLF*QQSTLLNRLEA Trigger: GGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTGTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS CAA 90 bp | CAAAGAAGTGGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTTCTaGCAGCAGAGCACCACTTTGTTGAACAGACTTGAAGCCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QRSGIQQGHRVQPLF*QQSTTLLNRLEASQ Trigger: CTGCGAGGCTTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTGTATGCCACTTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS TCA 72 bp | TCTCTTCTTGCAGCAGAGCACTTTGTTGAACAGACTTaGAGCCTCGCAGACAGGTGGCCACCAGCAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SLLAAEHFVEQT*SLADRWPPARS Trigger: GCTTCTTGCTGGTGGCCACCTGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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| CDS TCA 72 bp | GGCCACCAACTCACAGTTGTGATAAAGAAACATTCCTaGAAGGGTGAGGGTGATGCCCAGGTAGCTGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GHQLTVVIKKHS*KGEGDAQVAER Trigger: GCGCTCAGCTACCTGGGCATCACCCTCACCCTTTCAGGAATGTTTCTTTATCACAACTGTGAGTTGGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051207.2 ENSMUST00000109995.2 |
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| CDS CAA 72 bp | GGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTTCTaGCAGCAGAGCACCACTTTGTTGAACAGACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GIQQGHRVQPLF*QQSTTLLNRLE Trigger: TTCAAGTCTGTTCAACAAAGTGGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTGTATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109995.2 |
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| CDS CAA 90 bp | CAAAGAAGTGGCATACAGCAGGGTCACCGTGTCCAGCCTCTCTTCTaGCAGCAGAGCACTTTGTTGAACAGACTTGAAGCCTCGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: QRSGIQQGHRVQPLF*QQSTLLNRLEASQT Trigger: TGTCTGCGAGGCTTCAAGTCTGTTCAACAAAGTGCTCTGCTGCAAGAAGAGAGGCTGGACACGGTGACCCTGCTGTATGCCACTTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051207.2 |
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