Pregenerated sensors for SLC35E2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042202Ensembl transcript IDs: ENSMUST00000043829.11, ENSMUST00000105608.9, ENSMUST00000118607.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGGAAGGCCAGAAGAGCTCTGCCAACCAATACCCACAAGCACGTaGTCTTCGGTGTCAGCAGCTCCACAGCCAGATCTTGAGCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: AGRPEELCQPIPTST*SSVSAAPQPDLEQT Trigger: TGTCTGCTCAAGATCTGGCTGTGGAGCTGCTGACACCGAAGAGCACGTGCTTGTGGGTATTGGTTGGCAGAGCTCTTCTGGCCTTCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 90 bp | CTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTCCCCATCTaGTTTCCAGGAAGGAGCGAGAGACCTGCCCTGCATCATTTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: LWCSARQKLSPKFPI*FPGRSERPALHHFP Trigger: AGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTTCCTGGAAATCAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 90 bp | TGGAGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTaGTTCACTTGCAGCCAGGGAAGCTGTAGATCATTTGGTCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: WSLCLFHSAGWARRH*FTCSQGSCRSFGPV Trigger: CACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 90 bp | AAGTTTAGGTCTCCTGGATGGCATCAAACAGACAGCAACTCGGGTTaGTCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGG | + |
|
Preference number: 1 (lower is better) Translates to: KFRSPGWHQTDSNSG*SWSLCLFHSAGWAR Trigger: CCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCTGTTTGATGCCATCCAGGAGACCTAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 90 bp | TTACCCCTTTCCAATGTTAAGAAGACATCACTTGCTGGGCGGTGGTaGCGCACGCCTTTAATCCTAGCACTCGGGAGACAGAGGCAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: LPLSNVKKTSLAGRW*RTPLILALGRQRQV Trigger: CACCTGCCTCTGTCTCCCGAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCAGCAAGTGATGTCTTCTTAACATTGGAAAGGGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 90 bp | ACTTGCAGCCAGGGAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTaGCAGGCAGAAGCTGAGTCCCAAATTCCCCATCTGATTTCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: TCSQGSCRSFGPVVL*QAEAESQIPHLISR Trigger: CCTGGAAATCAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR GCA 90 bp | GTAAGAAGCCAGGCATGTAGAGCTCTGAGCATACTTAGACAGGTCTaGGGGAAGGCCAGAAGAGCTCTGCCAACCAATACCCACAAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: VRSQACRALSILRQV*GKARRALPTNTHKH Trigger: GTGCTTGTGGGTATTGGTTGGCAGAGCTCTTCTGGCCTTCCCGCAGACCTGTCTAAGTATGCTCAGAGCTCTACATGCCTGGCTTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 90 bp | TCTTTACCCCTTTCCAATGTTAAGAAGACATCACTTGCTGGGCGGTaGTGGCGCACGCCTTTAATCCTAGCACTCGGGAGACAGAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SLPLSNVKKTSLAGR*WRTPLILALGRQRQ Trigger: CTGCCTCTGTCTCCCGAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCAGCAAGTGATGTCTTCTTAACATTGGAAAGGGGTAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 90 bp | CACAGCACTGTCTCTCCGTGGCAGGAGAAACTTGTCTCTTCTGCCTaGTACTCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCT | + |
|
Preference number: 1 (lower is better) Translates to: HSTVSPWQEKLVSSA*YSGFYGSMLESLAS Trigger: AGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCAGGCAGAAGAGACAAGTTTCTCCTGCCACGGAGAGACAGTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 90 bp | CGATTCTCAACCCAGCCCTGTCCTGGAAGACCTGAAGGAAGCAGCTaGTTCCATGATCTTTCCACCTATGAGGAAAAGTCTCAAAGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: RFSTQPCPGRPEGSS*FHDLSTYEEKSQSS Trigger: GCTGCTTTGAGACTTTTCCTCATAGGTGGAAAGATCATGGAATCAGCTGCTTCCTTCAGGTCTTCCAGGACAGGGCTGGGTTGAGAATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 90 bp | ATTCCTGAAGCCCTGAGTACTATGCCTAGCATAATAAACGAAGGGTaGGAGAATGAAGAGATGAAGAGGCCGCCTCACAGGGAGATCAAT | + |
|
Preference number: 1 (lower is better) Translates to: IPEALSTMPSIINEG*ENEEMKRPPHREIN Trigger: ATTGATCTCCCTGTGAGGCGGCCTCTTCATCTCTTCATTCTCCCACCCTTCGTTTATTATGCTAGGCATAGTACTCAGGGCTTCAGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 90 bp | ATATGTGTGTGTGTATATGTGTGTGTGTTCATACACAAGCCAGTGTaGAGATGCCCAGAGAAGCCAGAGGCATTAGAATCCCTAATGCTG | + |
|
Preference number: 1 (lower is better) Translates to: ICVCVYVCVFIHKPV*RCPEKPEALESLML Trigger: CAGCATTAGGGATTCTAATGCCTCTGGCTTCTCTGGGCATCTGCACACTGGCTTGTGTATGAACACACACACATATACACACACACATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 90 bp | CTGCTACTCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTaGAATGTCTGTTTCATAGACTGTCAAGAACCAAGAGGCTTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: LLLWVLWLHARVIGI*NVCFIDCQEPRGFH Trigger: ATGGAAGCCTCTTGGTTCTTGACAGTCTATGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 90 bp | TGGCTGATCTTCAAGACGACCCGAATTCAATTCCCAGGAGCAACATaGCAGCTCATAATTATCTGTAACTCCAATTTCAGGGGATCCAAC | + |
|
Preference number: 1 (lower is better) Translates to: WLIFKTTRIQFPGAT*QLIIICNSNFRGSN Trigger: GTTGGATCCCCTGAAATTGGAGTTACAGATAATTATGAGCTGCCATGTTGCTCCTGGGAATTGAATTCGGGTCGTCTTGAAGATCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 90 bp | TTGATGTACCTTACATGGAGACACAGAGAAACCTCGACAGGCACCTaGTACATCAAAAAGAAGTGTCCCTTTAACTACAGCATAGCCTAT | + |
|
Preference number: 1 (lower is better) Translates to: LMYLTWRHRETSTGT*YIKKKCPFNYSIAY Trigger: ATAGGCTATGCTGTAGTTAAAGGGACACTTCTTTTTGATGTAGCAGGTGCCTGTCGAGGTTTCTCTGTGTCTCCATGTAAGGTACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CCA 90 bp | ACAGGTCTACACAGATTAATCCAACGTCTGCCATCTGTCCTCCACTaGATCTTTATTTTGAGAAGAGCAAAGAGGAAGGAACTAGAAACC | + |
|
Preference number: 1 (lower is better) Translates to: TGLHRLIQRLPSVLH*IFILRRAKRKELET Trigger: GGTTTCTAGTTCCTTCCTCTTTGCTCTTCTCAAAATAAAGATCCAGTGGAGGACAGATGGCAGACGTTGGATTAATCTGTGTAGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 90 bp | CACATTCACATACTTAAAATGGAAAAGCACTCCAGACCATCTGCTTaGATTAGAGATTTGCTGCCAACTTCCCAGAATGGGCAATCACAA | + |
|
Preference number: 1 (lower is better) Translates to: HIHILKMEKHSRPSA*IRDLLPTSQNGQSQ Trigger: TTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATCTCTAATTCAAGCAGATGGTCTGGAGTGCTTTTCCATTTTAAGTATGTGAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CCA 90 bp | ACAAAGTCAATTAAAAATGTATTGTTATGGTATAGTCATAACAAATaGTCAAGCAGGGCCGTTCCACGATTCTCAACCCAGCCCTGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: TKSIKNVLLWYSHNK*SSRAVPRFSTQPCP Trigger: AGGACAGGGCTGGGTTGAGAATCGTGGAACGGCCCTGCTTGACCATTTGTTATGACTATACCATAACAATACATTTTTAATTGACTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGGGGGTCCTGTGGTGCTCTaGCAGGCAGAAGCTGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TATRVDPGACAYSTVQAGGPVVL*QAEAES Trigger: GGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACC...CCCAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | CGGGAGACAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGGACAGCAACTCGGGTTaGTCCTGGAGCCTGTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: RETEAGGFLSSRPAWSTKDSNSG*SWSLCL Trigger: TAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTC...CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGTCTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCACCCAAATTCCCCATCTaGTTTCCAGGAAGGAGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLIPQCRLGTETLVHLQPPKFPI*FPGRSE Trigger: CTCGCTCCTTCCTGGAAATCAGATGGGGAATTTGGG...TGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | CGGGAGACAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGAAGGAGCGAGAGACCTaGCCTGCATCATTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: RETEAGGFLSSRPAWSTKKERET*PASFPS Trigger: AGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTT...CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGTCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CCA 90 bp | TATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGGGAAGATCATTTGGTCCTGTaGTGCTCTGCCAGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSTVQAGHGDTGSLAAREDHLVL*CSARQK Trigger: CTTCTGCCTGGCAGAGCACCACAGGACCAAATGATC...TTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CAA 90 bp | CACGGAGACACTGGTTCACTTGCAGCCAGGGAAGCTGTAGATCATTaGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: HGDTGSLAAREAVDH*VLWCSARQKLSPKF Trigger: GAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGCCCAAATTCCCCATCTaGTTTCCAGGAAGGAGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: RQQLGLILEPVLIPQCRLPKFPI*FPGRSE Trigger: CTCGCTCCTTCCTGGAAATCAGATGGGGAATTTGGG...CAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGAGACCTGGTGGCTCAGGCAGTCATCATATGATCCCTGGTGAAGAGTTATTCCACAGTGCAGGCTaGGCACGGAGACACTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LWRPGGSGSHHMIPGEELFHSAG*ARRHWF Trigger: GAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAA...TAACTCTTCACCAGGGATCATATGATGACTGCCTGAGCCACCAGGTCTCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATGTAGCACAGGCCAAGGAGGAGACACTTCTCCTTCACACAGCACTGTCTCTCTGCCAGGCAGAAGCTaGGTCCCAAATTCCCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: QCSTGQGGDTSPSHSTVSLPGRS*VPNSPS Trigger: AGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAG...AGAGACAGTGCTGTGTGAAGGAGAAGTGTCTCCTCCTTGGCCTGTGCTACATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACGGTCCTGTGGTGCTCTaGCAGGCAGAAGCTGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: CCQLPRMGNHKMVAETWDGPVVL*QAEAES Trigger: GGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACC...GTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGGTGGTGGTGATAGAAAAGTTTAGGTCTCCTGGATGGCATCAAACAGACTTCCACAGTGCAGGCTaGGCACGGAGACACTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VVVVVIEKFRSPGWHQTDFHSAG*ARRHWF Trigger: GAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAA...GTCTGTTTGATGCCATCCAGGAGACCTAAACTTTTCTATCACCACCACCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACCTGCCAGGCAGAAGCTaGGTCCCAAATTCCCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: CCQLPRMGNHKMVAETWDLPGRS*VPNSPS Trigger: AGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAG...GTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTAACCCAAGGCCCACTGTTGTCCTCCACTCCACCTTAAGCTCTGGAGACCTGTCATATGATCCCTGGTaGAGAGTTAGTTGTGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: VNPRPTVVLHSTLSSGDLSYDPW*RVSCAC Trigger: ACATGCACAACTAACTCTTCACCAGGGATCATATGA...CAGGTCTCCAGAGCTTAAGGTGGAGTGGAGGACAACAGTGGGCCTTGGGTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATTCCACAGTGCAGGCTaGGCACGGAGACACTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: EICCQLPRMGNHKMVAETFHSAG*ARRHWF Trigger: GAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAA...TGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | CAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAACAACGACAGCAACTCGGGTTaGTCCTGGAGCCTGTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QLPRMGNHKMVAETWDNNDSNSG*SWSLCL Trigger: TAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTC...GTTGTTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTGACACGTACTTGTAATCTCAGTCCTGAGAACGATGACTTAGAAGAATCTAGACAGGCGGATTTCTaGGTTCGAGGCCAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VVTRTCNLSPENDDLEESRQADF*VRGQPG Trigger: ACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGTCT...AGATTCTTCTAAGTCATCGTTCTCAGGACTGAGATTACAAGTACGTGTCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR GCA 90 bp | CATGTGCACGAAAGACTTAGAGCAGGGAGGACCAGTGAGACCTGGACAAGGAGTGAAACTTGTCTCTTCTaGCTGCTACTCTGGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: HVHERLRAGRTSETWTRSETCLF*LLLWVL Trigger: TAAAACCCAGAGTAGCAGGCAGAAGAGACAAGTTTC...ACTCCTTGTCCAGGTCTCACTGGTCCTCCCTGCTCTAAGTCTTTCGTGCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACACCCAAATTCCCCATCTaGTTTCCAGGAAGGAGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: EICCQLPRMGNHKMVAETPKFPI*FPGRSE Trigger: CTCGCTCCTTCCTGGAAATCAGATGGGGAATTTGGG...TGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGCATCTGGAATGTCTGTTTCATAGACTGTCAAGAACCAAGAGGCTTCCATGACAGCAACTCGGGTTaGTCCTGGAGCCTGTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: IGIWNVCFIDCQEPRGFHDSNSG*SWSLCL Trigger: TAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTC...ATGGAAGCCTCTTGGTTCTTGACAGTCTATGAAACAGACATTCCAGATGCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | GATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGAAGGAGCGAGAGACCTaGCCTGCATCATTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DLLPTSQNGQSQNGSRNMKERET*PASFPS Trigger: AGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTT...CATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTACTCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTAGACACTGGTTCACTTaGAGCCAGGGAAGCTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: CYSGFYGSMLESLASGMSRHWFT*SQGSCR Trigger: TCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCT...AGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGAACCTCAGCGTGTTAACCCAAGGCCCACTGTTGTCCTCCACTCCACCTTAAGAGTCATTGGCATCTaGAATGTCTGTTTCATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VEPQRVNPRPTVVLHSTLRVIGI*NVCFID Trigger: GTCTATGAAACAGACATTCCAGATGCCAATGACTCT...TAAGGTGGAGTGGAGGACAACAGTGGGCCTTGGGTTAACACGCTGAGGTTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGCATCTGGAATGTCTGTTTCATAGACTGTCAAGAACCAAGAGGCTTCCATAAGGAGCGAGAGACCTaGCCTGCATCATTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IGIWNVCFIDCQEPRGFHKERET*PASFPS Trigger: AGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTT...ATGGAAGCCTCTTGGTTCTTGACAGTCTATGAAACAGACATTCCAGATGCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGACACGTACTTGTAATCTCAGTCCTGAGAACGATGACTTAGAAGAATCTGATCATTTGGTCCTGTaGTGCTCTGCCAGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VVTRTCNLSPENDDLEESDHLVL*CSARQK Trigger: CTTCTGCCTGGCAGAGCACCACAGGACCAAATGATC...AGATTCTTCTAAGTCATCGTTCTCAGGACTGAGATTACAAGTACGTGTCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATGTAGCACAGGCCAAGGAGGAGACACTTCTCCTTCACACAGCACTGTCTCTAGAGTCATTGGCATCTaGAATGTCTGTTTCATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: QCSTGQGGDTSPSHSTVSRVIGI*NVCFID Trigger: GTCTATGAAACAGACATTCCAGATGCCAATGACTCT...AGAGACAGTGCTGTGTGAAGGAGAAGTGTCTCCTCCTTGGCCTGTGCTACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGACACGTACTTGTAATCTCAGTCCTGAGAACGATGACTTAGAAGAATCTGCTCTGGAGACCTGGTaGCTCAGGCAGTCATCATAT | + |
|
Preference number: 2 (lower is better) Translates to: VVTRTCNLSPENDDLEESALETW*LRQSSY Trigger: ATATGATGACTGCCTGAGCCACCAGGTCTCCAGAGC...AGATTCTTCTAAGTCATCGTTCTCAGGACTGAGATTACAAGTACGTGTCACCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGCATCTGGAATGTCTGTTTCATAGACTGTCAAGAACCAAGAGGCTTCCATAGACACTGGTTCACTTaGAGCCAGGGAAGCTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: IGIWNVCFIDCQEPRGFHRHWFT*SQGSCR Trigger: TCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCT...ATGGAAGCCTCTTGGTTCTTGACAGTCTATGAAACAGACATTCCAGATGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAACAACCTTGTCTCTTCTGCCTaGTACTCTGGGTTTTATGGC | + |
|
Preference number: 2 (lower is better) Translates to: QLPRMGNHKMVAETWDNNLVSSA*YSGFYG Trigger: GCCATAAAACCCAGAGTAGCAGGCAGAAGAGACAAG...GTTGTTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTGACACGTACTTGTAATCTCAGTCCTGAGAACGATGACTTAGAAGAATCTATACTTAGACAGGTCTaGGGGAAGGCCAGAAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVTRTCNLSPENDDLEESILRQV*GKARRA Trigger: AGCTCTTCTGGCCTTCCCGCAGACCTGTCTAAGTAT...AGATTCTTCTAAGTCATCGTTCTCAGGACTGAGATTACAAGTACGTGTCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGATCACAAAGCCACTTGTTTTGTGCTGTTTTTAAGGCACAAAGTAAAGTGTGTAACAGAGCCCTaGGGGTCCTGGATTTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: EQDHKATCFVLFLRHKVKCVTEP*GSWIWL Trigger: AAGCCAAATCCAGGACCCCCAGGGCTCTGTTACACA...CTTTACTTTGTGCCTTAAAAACAGCACAAAACAAGTGGCTTTGTGATCCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAGAGTCATTGGCATCTaGAATGTCTGTTTCATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: CCQLPRMGNHKMVAETWDRVIGI*NVCFID Trigger: GTCTATGAAACAGACATTCCAGATGCCAATGACTCT...GTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR GCA 72 bp | CACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTaGAGCCAGGGAAGCTGTAGATCATTTGGTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSAGWARRHWFT*SQGSCRSFGPV Trigger: CACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 72 bp | TCTGCCAGGCAGAAGCTGAGTCCCAAATTCCCCATCTaGTTTCCAGGAAGGAGCGAGAGACCTGCCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SARQKLSPKFPI*FPGRSERPALH Trigger: ATGCAGGGCAGGTCTCTCGCTCCTTCCTGGAAATCAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGAGACAGGCGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQRQADF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGTCTCTGCCTCCCAAGTGCTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | TACTTAGACAGGTCTGCGGGAAGGCCAGAAGAGCTCTaGCAACCAATACCCACAAGCACGTGCTCTTCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLDRSAGRPEEL*QPIPTSTCSSV Trigger: CACCGAAGAGCACGTGCTTGTGGGTATTGGTTGGCAGAGCTCTTCTGGCCTTCCCGCAGACCTGTCTAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | TCTCCTGGATGGCATCAAACAGACAGCAACTCGGGTTaGTCCTGGAGCCTGTGCTTATTCCACAGTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPGWHQTDSNSG*SWSLCLFHSAG Trigger: GCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCTGTTTGATGCCATCCAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 72 bp | ATCCTAGCACTCGGGAGACAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILALGRQRQVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGTCTCCCGAGTGCTAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | CAGGGAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTaGCAGGCAGAAGCTGAGTCCCAAATTCCCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGSCRSFGPVVL*QAEAESQIPHL Trigger: CAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 72 bp | CTTGCAGCCAGGGAAGCTGTAGATCATTTGGTCCTGTaGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LAAREAVDHLVL*CSARQKLSPKF Trigger: GAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 72 bp | AAGGCCCACTGTTGTCCTCCACTCCACCTTAAGCTCTaGAGACCTGGTGGCTCAGGCAGTCATCATATGATC | + |
|
Preference number: 3 (lower is better) Translates to: KAHCCPPLHLKL*RPGGSGSHHMI Trigger: GATCATATGATGACTGCCTGAGCCACCAGGTCTCCAGAGCTTAAGGTGGAGTGGAGGACAACAGTGGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CCA 72 bp | TCCAATGTTAAGAAGACATCACTTGCTGGGCGGTGGTaGCGCACGCCTTTAATCCTAGCACTCGGGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SNVKKTSLAGRW*RTPLILALGRQ Trigger: CTGTCTCCCGAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCAGCAAGTGATGTCTTCTTAACATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATGTAGCACAGGCCAAGGAGGAGACACTTCTCCTTCACACAGCACTGTCTCTAGACAGCAACTCGGGTaGATCCTGGAGCCTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QCSTGQGGDTSPSHSTVSRQQLG*ILEPVL Trigger: AAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCT...AGAGACAGTGCTGTGTGAAGGAGAAGTGTCTCCTCCTTGGCCTGTGCTACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 72 bp | TGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTaGTTCACTTGCAGCCAGGGAAGCTGTAGATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CLFHSAGWARRH*FTCSQGSCRSF Trigger: AAATGATCTACAGCTTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 72 bp | CTTTCCAATGTTAAGAAGACATCACTTGCTGGGCGGTaGTGGCGCACGCCTTTAATCCTAGCACTCGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSNVKKTSLAGR*WRTPLILALGR Trigger: TCTCCCGAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCAGCAAGTGATGTCTTCTTAACATTGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | ATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTaGGTCCCAAATTCCCCATCTGATTTCCAGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IIWSCGALPGRS*VPNSPSDFQEG Trigger: TCCTTCCTGGAAATCAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR TCA 72 bp | GTGCTCTTCGGTGTCAGCAGCTCCACAGCCAGATCTTaGGCAGACAGGTCTACACAGATTAATCCAACGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLFGVSSSTARS*ADRSTQINPTS Trigger: AGACGTTGGATTAATCTGTGTAGACCTGTCTGCTCAAGATCTGGCTGTGGAGCTGCTGACACCGAAGAGCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 72 bp | CAAGACAGGCTTTTCTCTGTGTTGCCCTGGCTGTCCTaGAACTTGTTCTGTAGTCCAGACTGCCCTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QDRLFSVLPWLS*NLFCSPDCPQT Trigger: AGTTTGAGGGCAGTCTGGACTACAGAACAAGTTCCAGGACAGCCAGGGCAACACAGAGAAAAGCCTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 72 bp | GCCCTGAGTACTATGCCTAGCATAATAAACGAAGGGTaGGAGAATGAAGAGATGAAGAGGCCGCCTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSTMPSIINEG*ENEEMKRPPHR Trigger: CCTGTGAGGCGGCCTCTTCATCTCTTCATTCTCCCACCCTTCGTTTATTATGCTAGGCATAGTACTCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | ACCCAGCCCTGTCCTGGAAGACCTGAAGGAAGCAGCTaGTTCCATGATCTTTCCACCTATGAGGAAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQPCPGRPEGSS*FHDLSTYEEKS Trigger: AGACTTTTCCTCATAGGTGGAAAGATCATGGAATCAGCTGCTTCCTTCAGGTCTTCCAGGACAGGGCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | ATTCCCCATCTGATTTCCAGGAAGGAGCGAGAGACCTaGCCTGCATCATTTCCCTCTAGTACAGAAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: IPHLISRKERET*PASFPSSTEGT Trigger: TGTTCCTTCTGTACTAGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTTCCTGGAAATCAGATGGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CCA 72 bp | GTGGCAGGAGAAACTTGTCTCTTCTGCCTGCTACTCTaGGTTTTATGGCTCCATGCTAGAGTCATTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: VAGETCLFCLLL*VLWLHARVIGI Trigger: GATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCAGGCAGAAGAGACAAGTTTCTCCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR GCA 72 bp | TATGTGTGTGTGTTCATACACAAGCCAGTGTGCAGATaGCCAGAGAAGCCAGAGGCATTAGAATCCCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: YVCVFIHKPVCR*PEKPEALESLM Trigger: CATTAGGGATTCTAATGCCTCTGGCTTCTCTGGGCATCTGCACACTGGCTTGTGTATGAACACACACACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | GAAGTTGGTGAAACACTCTACATGAGTTCTGGGAACTaGACTTGGGTCCTCAGCAAGAAACATAACCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: EVGETLYMSSGN*TWVLSKKHNHS Trigger: CGAGTGGTTATGTTTCTTGCTGAGGACCCAAGTTCAGTTCCCAGAACTCATGTAGAGTGTTTCACCAACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | CTTACATGGAGACACAGAGAAACCTCGACAGGCACCTaGTACATCAAAAAGAAGTGTCCCTTTAACTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTWRHRETSTGT*YIKKKCPFNYS Trigger: GCTGTAGTTAAAGGGACACTTCTTTTTGATGTAGCAGGTGCCTGTCGAGGTTTCTCTGTGTCTCCATGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | CTAGAGTTCAAGGACACTATGGGTTACATAGGTAAATaGAATCTCAGGAGGAGCCGGCATTGTTTCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LEFKDTMGYIGK*NLRRSRHCFPS Trigger: AGATGGGAAACAATGCCGGCTCCTCCTGAGATTGCATTTACCTATGTAACCCATAGTGTCCTTGAACTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACTGTGCCATTCAGAATCGCCCGCTTCACATTCACATACTTAAAATGGAATCCATGCTAGAGTCATaGGCATCTGGAATGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SHCAIQNRPLHIHILKMESMLES*ASGMSV Trigger: AACAGACATTCCAGATGCCAATGACTCTAGCATGGA...TTCCATTTTAAGTATGTGAATGTGAAGCGGGCGATTCTGAATGGCACAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | AGACATCACTTGGACAGATGTGACAGGAGGCTGTGCTaGGCATCTGTTATTATCACTGAGCAAAGTGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: RHHLDRCDRRLC*ASVIITEQSDH Trigger: ATGATCACTTTGCTCAGTGATAATAACAGATGCTCAGCACAGCCTCCTGTCACATCTGTCCAAGTGATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | AGCACTCCAGACCATCTGCTTGAATTAGAGATTTGCTaGCAACTTCCCAGAATGGGCAATCACAAAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: STPDHLLELEIC*QLPRMGNHKMV Trigger: TACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATCTCTAATTCAAGCAGATGGTCTGGAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | AAAAGATTGATGTTCAAAGGCAGGAGTCAGAAGTGGTaGCACGTACTTGTAATCTCAGTCCTGAGAACGATG | + |
|
Preference number: 3 (lower is better) Translates to: KRLMFKGRSQKW*HVLVISVLRTM Trigger: CATCGTTCTCAGGACTGAGATTACAAGTACGTGTCACCACTTCTGACTCCTGCCTTTGAACATCAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR GCA 72 bp | AAAAGCACTCCAGACCATCTGCTTGAATTAGAGATTTaGTGCCAACTTCCCAGAATGGGCAATCACAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: KSTPDHLLELEI*CQLPRMGNHKM Trigger: CATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATCTCTAATTCAAGCAGATGGTCTGGAGTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CCA 72 bp | TTCAAGACGACCCGAATTCAATTCCCAGGAGCAACATaGCAGCTCATAATTATCTGTAACTCCAATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FKTTRIQFPGAT*QLIIICNSNFR Trigger: CCTGAAATTGGAGTTACAGATAATTATGAGCTGCCATGTTGCTCCTGGGAATTGAATTCGGGTCGTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | ATACTTAAAATGGAAAAGCACTCCAGACCATCTGCTTaGATTAGAGATTTGCTGCCAACTTCCCAGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILKMEKHSRPSA*IRDLLPTSQNG Trigger: CCCATTCTGGGAAGTTGGCAGCAAATCTCTAATTCAAGCAGATGGTCTGGAGTGCTTTTCCATTTTAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | ATTAGAATCCCTAATGCTGAAGTTATAGGAAGTTGGTaGAACACTCTACATGAGTTCTGGGAACTGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: IRIPNAEVIGSW*NTLHEFWELNL Trigger: CAAGTTCAGTTCCCAGAACTCATGTAGAGTGTTTCACCAACTTCCTATAACTTCAGCATTAGGGATTCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CCA 72 bp | ACTCAGGAGGAATTATCCAGGACAAGGAATGACACGTaGTGTCAATATTTGTACATTTACATCAGTAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TQEELSRTRNDT*CQYLYIYISNN Trigger: ATTGTTACTGATGTAAATGTACAAATATTGACACCACGTGTCATTCCTTGTCCTGGATAATTCCTCCTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR TCA 72 bp | GTGGCCTTTTCCAAAGTGCCAACATTGAACGAACATTaGACGAACATACTCACAATTACATTATTATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VAFSKVPTLNEH*TNILTITLLLS Trigger: ACTTAATAATAATGTAATTGTGAGTATGTTCGTTCAATGTTCGTTCAATGTTGGCACTTTGGAAAAGGCCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGGGAAAGGTCCATGCTGGAATaGGCAAGGCCACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTVQAGHGDTGSLAARERSMLE*ARPQQQ Trigger: CTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCT...TTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCAAGGAGGAGACACTTCTCCTTCACACAGCACTGTCTCTCCGTGGCAGAGGTCCATGCTGGAATaGGCAAGGCCACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGGDTSPSHSTVSPWQRSMLE*ARPQQQ Trigger: CTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCT...CTGCCACGGAGAGACAGTGCTGTGTGAAGGAGAAGTGTCTCCTCCTTGGCCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGCAGCACCTAACATGCTaGGCTCTCCCTCTAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFHSAGWARRHWFTCSQQHLTC*ALPLTG Trigger: CCCTGTTAGAGGGAGAGCCCAGCATGTTAGGTGCTG...CTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | TATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGGGAACCACAGCAGCAGCACTaGTGTAGAACTGCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSTVQAGHGDTGSLAAREPQQQH*CRTAVP Trigger: CGGAACTGCAGTTCTACACCAGTGCTGCTGCTGTGG...TTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGGGTGCTGTCTAGAGTCCTaGGGAACAAGGGGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TATRVDPGACAYSTVQAGCCLES*GTRGSV Trigger: CACAGAGCCCCTTGTTCCCCAGGACTCTAGACAGCA...CCCAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCGAAGTGTTTTTCCCTTaGGCTCTTCCTCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCLFHSAGWARRHWFTCEVFFP*ALPRSQ Trigger: CTGGCTGCGAGGAAGAGCCCAAGGGAAAAACACTTC...GCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCGAGCAAGCTCTCCTCTaGGCTGCCATCACCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAVDHLVLWCSARQKLSPEQALL*AAITFG Trigger: ACCAAAGGTGATGGCAGCCCAGAGGAGAGCTTGCTC...GGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTCCCCATCTGCAGCACCTAACATGCTaGGCTCTCCCTCTAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGPVVLCQAEAESQIPHLQHLTC*ALPLTG Trigger: CCCTGTTAGAGGGAGAGCCCAGCATGTTAGGTGCTG...CAGATGGGGAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCCACAGCAGCAGCACTaGTGTAGAACTGCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSCRSFGPVVLCQAEAESPQQQH*CRTAVP Trigger: CGGAACTGCAGTTCTACACCAGTGCTGCTGCTGTGG...GGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCGAAGAAGGTCCATGCTaGAATGAGCAAGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCLFHSAGWARRHWFTCEEGPC*NEQGHS Trigger: GCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTC...GCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCCTCTGTGTCATCTTCTaGGTTTCGGCTGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCLFHSAGWARRHWFTCLCVIF*VSAGGC Trigger: ACAGCCACCAGCCGAAACCCAGAAGATGACACAGAG...GCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAAGGAGCGAGAGACCTGCCCTGCATCATTTCCCTCTAGTACAGAAGGATGTCCTGGCTGTAGCTaGAGCTCTTCCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKERETCPASFPSSTEGCPGCS*SSSHSF Trigger: GAAGGAGTGGGAAGAGCTTCAGCTACAGCCAGGACA...TCCTTCTGTACTAGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGTGCATAGTCTCCTGCTaGTACTGCCTGGCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQQLGLILEPVLIPQCRLCIVSC*YCLALL Trigger: CAACAAGGCCAGGCAGTATCAGCAGGAGACTATGCA...CAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GTAGAACCTCAGCGTGTTAACCCAAGGCCCACTGTTGTCCTCCACTCCACCTTATGCTGTCTAGAGTCCTaGGGAACAAGGGGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEPQRVNPRPTVVLHSTLCCLES*GTRGSV Trigger: CACAGAGCCCCTTGTTCCCCAGGACTCTAGACAGCA...TAAGGTGGAGTGGAGGACAACAGTGGGCCTTGGGTTAACACGCTGAGGTTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CAA 72 bp | ACTGGTTCACTTGCAGCCAGGGAAGCTGTAGATCATTaGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGSLAAREAVDH*VLWCSARQKLS Trigger: ACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTCCCTGGCTGCAAGTGAACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| 3UTR CAA 72 bp | GTCTCCTGGATGGCATCAAACAGACAGCAACTCGGGTaGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSWMASNRQQLG*ILEPVLIPQCR Trigger: CCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCTGTTTGATGCCATCCAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCTTATTTCCGTGGCAGTaGACAACGCTAGTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAVDHLVLWCSARQKLSPLFPWQ*TTLVLP Trigger: TGGGAGGACTAGCGTTGTGCACTGCCACGGAAATAA...GGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTCCCACAGCAGCAGCACTaGTGTAGAACTGCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VDHLVLWCSARQKLSPKFPQQQH*CRTAVP Trigger: CGGAACTGCAGTTCTACACCAGTGCTGCTGCTGTGG...GAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGCACGAAAGACTTAGAGCAGGGAGGACCAGTGAGACCTGGACAAGGAGTCTCTGTGTCATCTTCTaGGTTTCGGCTGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVHERLRAGRTSETWTRSLCVIF*VSAGGC Trigger: ACAGCCACCAGCCGAAACCCAGAAGATGACACAGAG...ACTCCTTGTCCAGGTCTCACTGGTCCTCCCTGCTCTAAGTCTTTCGTGCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| CDS-3UTR CCA 90 bp | GTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAATTCTGCTGTCTAGAGTCCTaGGGAACAAGGGGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VDHLVLWCSARQKLSPKFCCLES*GTRGSV Trigger: CACAGAGCCCCTTGTTCCCCAGGACTCTAGACAGCA...GAATTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCTGTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCATAGAGACCCCCAAGTaGGAAGTGTTTTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVDHLVLWCSARQKLSPIETPK*EVFFPW Trigger: CCAAGGGAAAAACACTTCTCACTTGGGGGTCTCTAT...GGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGCGAGAGACCTGCCCTGCATCATTTCCCTCTAGTACAGAAGGAACATCTATGTCCTGGCTGTAGCTaGAGCTCTTCCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSERPALHHFPLVQKEHLCPGCS*SSSHSF Trigger: GAAGGAGTGGGAAGAGCTTCAGCTACAGCCAGGACA...TAGATGTTCCTTCTGTACTAGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGCACGAAAGACTTAGAGCAGGGAGGACCAGTGAGACCTGGACAAGGAGTCTCAGCAAAGGACACTaGCACATTCTTGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVHERLRAGRTSETWTRSLSKGH*HILEAD Trigger: GTCAGCCTCAAGAATGTGGCAGTGTCCTTTGCTGAG...ACTCCTTGTCCAGGTCTCACTGGTCCTCCCTGCTCTAAGTCTTTCGTGCACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| CDS-3UTR CCA 90 bp | GCATCAAACAGACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGGAAGTGTTTTTCCCTTaGGCTCTTCCTCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASNRQQLGLILEPVLIPQEVFFP*ALPRSQ Trigger: CTGGCTGCGAGGAAGAGCCCAAGGGAAAAACACTTC...CTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCTGTTTGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCAAACAGACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACACCTGCTGATACTGCCTaGCCTTGTTGTAGAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIKQTATRVDPGACAYSTPADTA*PCCRAR Trigger: TCTTGCTCTACAACAAGGCCAGGCAGTATCAGCAGG...TGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCTGTTTGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | CAATGTAGCACAGGCCAAGGAGGAGACACTTCTCCTTCACACAGCACTGTCTCTATAGAGACCCCCAAGTaGGAAGTGTTTTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSTGQGGDTSPSHSTVSIETPK*EVFFPW Trigger: CCAAGGGAAAAACACTTCTCACTTGGGGGTCTCTAT...AGAGACAGTGCTGTGTGAAGGAGAAGTGTCTCCTCCTTGGCCTGTGCTACATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAATGTCCTGGCTGTAGCTaGAGCTCTTCCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTSQNGQSQNGSRNMGQCPGCS*SSSHSF Trigger: GAAGGAGTGGGAAGAGCTTCAGCTACAGCCAGGACA...TTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGAGCAAGCTCTCCTCTaGGCTGCCATCACCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CYSGFYGSMLESLASGMSEQALL*AAITFG Trigger: ACCAAAGGTGATGGCAGCCCAGAGGAGAGCTTGCTC...AGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | TGCTACTCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTCAGCACCTAACATGCTaGGCTCTCCCTCTAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYSGFYGSMLESLASGMSQHLTC*ALPLTG Trigger: CCCTGTTAGAGGGAGAGCCCAGCATGTTAGGTGCTG...AGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGAGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGTGGTGATAGAAAAGTTTAGGTCTCCTGGATGGCATCAAACAGACCTCTGTGTCATCTTCTaGGTTTCGGCTGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVIEKFRSPGWHQTDLCVIF*VSAGGC Trigger: ACAGCCACCAGCCGAAACCCAGAAGATGACACAGAG...GTCTGTTTGATGCCATCCAGGAGACCTAAACTTTTCTATCACCACCACCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGGTGGTGATAGAAAAGTTTAGGTCTCCTGGATGGCATCAAACAGACCCTGCTGATACTGCCTaGCCTTGTTGTAGAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVVVVIEKFRSPGWHQTDPADTA*PCCRAR Trigger: TCTTGCTCTACAACAAGGCCAGGCAGTATCAGCAGG...GTCTGTTTGATGCCATCCAGGAGACCTAAACTTTTCTATCACCACCACCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACATAGAGACCCCCAAGTaGGAAGTGTTTTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCQLPRMGNHKMVAETWDIETPK*EVFFPW Trigger: CCAAGGGAAAAACACTTCTCACTTGGGGGTCTCTAT...GTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGTTTCATGCATAGTCTCCTGCTaGTACTGCCTGGCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFYGSMLESLASGMSVSCIVSC*YCLALL Trigger: CAACAAGGCCAGGCAGTATCAGCAGGAGACTATGCA...TGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGAAGTGTTTTTCCCTTaGGCTCTTCCTCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLLPTSQNGQSQNGSRNMEVFFP*ALPRSQ Trigger: CTGGCTGCGAGGAAGAGCCCAAGGGAAAAACACTTC...CATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGAAGAAGGTCCATGCTaGAATGAGCAAGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLPTSQNGQSQNGSRNMEEGPC*NEQGHS Trigger: GCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTC...CATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGAAGCAGCTGATTCCATGATCTTTCCACCTATGAGGAAAAGTCTCAAATGCATAGTCTCCTGCTaGTACTGCCTGGCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKEAADSMIFPPMRKSLKCIVSC*YCLALL Trigger: CAACAAGGCCAGGCAGTATCAGCAGGAGACTATGCA...TTTGAGACTTTTCCTCATAGGTGGAAAGATCATGGAATCAGCTGCTTCCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGTTTCACTCAGCAAAGGACACTaGCACATTCTTGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGFYGSMLESLASGMSVSLSKGH*HILEAD Trigger: GTCAGCCTCAAGAATGTGGCAGTGTCCTTTGCTGAG...TGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAACAACCTCAGCAAAGGACACTaGCACATTCTTGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRMGNHKMVAETWDNNLSKGH*HILEAD Trigger: GTCAGCCTCAAGAATGTGGCAGTGTCCTTTGCTGAG...GTTGTTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGTTTCATTATTTCCGTGGCAGTaGACAACGCTAGTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFYGSMLESLASGMSVSLFPWQ*TTLVLP Trigger: TGGGAGGACTAGCGTTGTGCACTGCCACGGAAATAA...TGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | GATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGCCTGCTGATACTGCCTaGCCTTGTTGTAGAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLLPTSQNGQSQNGSRNMPADTA*PCCRAR Trigger: TCTTGCTCTACAACAAGGCCAGGCAGTATCAGCAGG...CATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATATGATCCCTGGTGAAGAGTTAGTTGTGCATGTACACTTTGATGTAGAAGAAGGTCCATGCTaGAATGAGCAAGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHHMIPGEELVVHVHFDVEEGPC*NEQGHS Trigger: GCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTC...TACATCAAAGTGTACATGCACAACTAACTCTTCACCAGGGATCATATGATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| 3UTR CAA 72 bp | CAAAGTGATCATCTGAGAGCAGGATCACAAAGCCACTaGTTTTGTGCTGTTTTTAAGGCACAAAGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSDHLRAGSQSH*FCAVFKAQSKV Trigger: AACTTTACTTTGTGCCTTAAAAACAGCACAAAACAAGTGGCTTTGTGATCCTGCTCTCAGATGATCACTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| 3UTR CAA 72 bp | TGTGGCCTTTTCCAAAGTGCCAACATTGAACGAACATaGAACGAACATACTCACAATTACATTATTATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGLFQSANIERT*NEHTHNYIIIK Trigger: CTTAATAATAATGTAATTGTGAGTATGTTCGTTCAATGTTCGTTCAATGTTGGCACTTTGGAAAAGGCCACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| CDS-3UTR CAA 90 bp | TATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGGGAAGGAATGAGGGACAGGTaGACCAGCAGCCCTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YSTVQAGHGDTGSLAAREGMRDR*TSSPVY Trigger: GTACACAGGGCTGCTGGTCAACCTGTCCCTCATTCC...TTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CCA 90 bp | GTGCTGTCTAGAGTCCTGGGGAACAAGGGGCTCTGTGTCATCTTCTaGGTTTCGGCTGGTGGCTGTGACCAGACTCTGCATAGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLSRVLGNKGLCVIF*VSAGGCDQTLHSLL Trigger: CAGGAGACTATGCAGAGTCTGGTCACAGCCACCAGCCGAAACCCAGAAGATGACACAGAGCCCCTTGTTCCCCAGGACTCTAGACAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAAGGAGCGAGAGACCTGCCCTGCATCATTTCCCTCTAGTACAGAAGGAGGAATGAGGGACAGGTaGACCAGCAGCCCTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRKERETCPASFPSSTEGGMRDR*TSSPVY Trigger: GTACACAGGGCTGCTGGTCAACCTGTCCCTCATTCC...TCCTTCTGTACTAGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGATCATTTGGTCCTGTGGTGCTCTGCCAGGCAGAAGCTGAGTCCCAAAGGAATGAGGGACAGGTaGACCAGCAGCCCTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AVDHLVLWCSARQKLSPKGMRDR*TSSPVY Trigger: GTACACAGGGCTGCTGGTCAACCTGTCCCTCATTCC...TTTGGGACTCAGCTTCTGCCTGGCAGAGCACCACAGGACCAAATGATCTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CCA 90 bp | CCCACTCCTTCCAATCACAGGGATATCCATGAAGAAGGTCCATGCTaGAATGAGCAAGGCCACAGCAGCAGCACTGGTGTAGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTPSNHRDIHEEGPC*NEQGHSSSTGVELQ Trigger: CTGCAGTTCTACACCAGTGCTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTCATGGATATCCCTGTGATTGGAAGGAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAAGGAGCGAGAGACCTGCCCTGCATCATTTCCCTCTAGTACAGAAGGAAGAAGTGTTTTTCCCTaGGGCTCTTCCTCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKERETCPASFPSSTEGRSVFP*GSSSQP Trigger: TGGCTGCGAGGAAGAGCCCAAGGGAAAAACACTTCT...TCCTTCTGTACTAGAGGGAAATGATGCAGGGCAGGTCTCTCGCTCCTTCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTGTGCTTATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCGGGCTGCCATCACCTTaGGTAAAGACAATCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLCLFHSAGWARRHWFTCGLPSP*VKTIFS Trigger: TGAGAAGATTGTCTTTACCAAAGGTGATGGCAGCCC...GCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATAAGCACAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | TATTCCACAGTGCAGGCTGGGCACGGAGACACTGGTTCACTTGCAGCCAGGGAAGAAAACCCCAGGATGTaGAAGCTTATTTCCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSTVQAGHGDTGSLAAREENPRM*KLISVA Trigger: TGCCACGGAAATAAGCTTCAACATCCTGGGGTTTTC...TTCCCTGGCTGCAAGTGAACCAGTGTCTCCGTGCCCAGCCTGCACTGTGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS GCA 90 bp | CTTCCCACTCCTTCCAATCACAGGGATATCCATGAAGAAGGTCCATaGTGGAATGAGCAAGGCCACAGCAGCAGCACTGGTGTAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTPSNHRDIHEEGP*WNEQGHSSSTGVEL Trigger: CAGTTCTACACCAGTGCTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTCATGGATATCCCTGTGATTGGAAGGAGTGGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGCAACTCGGGTTGATCCTGGAGCCTGTGCTTATTCCACAGTGCAGGCTGGAAAACCCCAGGATGTaGAAGCTTATTTCCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQQLGLILEPVLIPQCRLENPRM*KLISVA Trigger: TGCCACGGAAATAAGCTTCAACATCCTGGGGTTTTC...CAGCCTGCACTGTGGAATAAGCACAGGCTCCAGGATCAACCCGAGTTGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | GATTTGCTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGAGAAGTGTTTTTCCCTaGGGCTCTTCCTCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLPTSQNGQSQNGSRNMRSVFP*GSSSQP Trigger: TGGCTGCGAGGAAGAGCCCAAGGGAAAAACACTTCT...CATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAGCAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAAGGGCTGCCATCACCTTaGGTAAAGACAATCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTSQNGQSQNGSRNMGQGLPSP*VKTIFS Trigger: TGAGAAGATTGTCTTTACCAAAGGTGATGGCAGCCC...TTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGTTTCAGGGCTGCCATCACCTTaGGTAAAGACAATCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFYGSMLESLASGMSVSGLPSP*VKTIFS Trigger: TGAGAAGATTGTCTTTACCAAAGGTGATGGCAGCCC...TGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | CAACTTCCCAGAATGGGCAATCACAAAATGGTAGCAGAAACATGGGACAACAACGAAAACCCCAGGATGTaGAAGCTTATTTCCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLPRMGNHKMVAETWDNNENPRM*KLISVA Trigger: TGCCACGGAAATAAGCTTCAACATCCTGGGGTTTTC...GTTGTTGTCCCATGTTTCTGCTACCATTTTGTGATTGCCCATTCTGGGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTTTTATGGCTCCATGCTAGAGTCATTGGCATCTGGAATGTCTGTTTCAGACAGGCTAGTGATTTaGTTTCCAAAAACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SGFYGSMLESLASGMSVSDRLVI*FPKTMM Trigger: CATCATCGTTTTTGGAAACAAAATCACTAGCCTGTC...TGAAACAGACATTCCAGATGCCAATGACTCTAGCATGGAGCCATAAAACCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGAAGAGTTAGTTGTGCATGTACACTTTGATGTACCTTACATGGAGACAGACAGGCTAGTGATTTaGTTTCCAAAAACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGEELVVHVHFDVPYMETDRLVI*FPKTMM Trigger: CATCATCGTTTTTGGAAACAAAATCACTAGCCTGTC...TGTCTCCATGTAAGGTACATCAAAGTGTACATGCACAACTAACTCTTCACCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGATCACAAAGCCACTTGTTTTGTGCTGTTTTTAAGGCACAAAGTAAAGGACAGGCTAGTGATTTaGTTTCCAAAAACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EQDHKATCFVLFLRHKVKDRLVI*FPKTMM Trigger: CATCATCGTTTTTGGAAACAAAATCACTAGCCTGTC...CTTTACTTTGTGCCTTAAAAACAGCACAAAACAAGTGGCTTTGTGATCCTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105608.9 |
||
| CDS TCA 72 bp | CTGTCAGCAGCAACAGCACGATGTCCTGGCTGTAGCTaGAGCTCTTCCCACTCCTTCCAATCACAGGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: LSAATARCPGCS*SSSHSFQSQGY Trigger: ATATCCCTGTGATTGGAAGGAGTGGGAAGAGCTTCAGCTACAGCCAGGACATCGTGCTGTTGCTGCTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS GCA 72 bp | CCTTCCAATCACAGGGATATCCATGAAGAAGGTCCATaGTGGAATGAGCAAGGCCACAGCAGCAGCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSNHRDIHEEGP*WNEQGHSSSTG Trigger: ACCAGTGCTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTCATGGATATCCCTGTGATTGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS GCA 72 bp | CCAAAAACGATGATGCTGAGCCAGATAGACAAGGCGTaGTTCACAGTACTGGCGACACTGAACGTCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKTMMLSQIDKA*FTVLATLNVTG Trigger: CCCTGTGACGTTCAGTGTCGCCAGTACTGTGAAGCACGCCTTGTCTATCTGGCTCAGCATCATCGTTTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CCA 72 bp | TCCAATCACAGGGATATCCATGAAGAAGGTCCATGCTaGAATGAGCAAGGCCACAGCAGCAGCACTGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SNHRDIHEEGPC*NEQGHSSSTGV Trigger: TACACCAGTGCTGCTGCTGTGGCCTTGCTCATTCCAGCATGGACCTTCTTCATGGATATCCCTGTGATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS TCA 72 bp | TGTTGGTGGATAACGCAGCTGAAAACCCCAGGATGTTaGAGCTTATTTCCGTGGCAGTGCACAACGCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CWWITQLKTPGC*SLFPWQCTTLV Trigger: GACTAGCGTTGTGCACTGCCACGGAAATAAGCTTCAACATCCTGGGGTTTTCAGCTGCGTTATCCACCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CAA 90 bp | CAATCCATAATGTTGGTGGATAACGCAGCTGAAAACCCCAGGATGTaGAAGCTTATTTCCGTGGCAGTGCACAACGCTAGTCCTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QSIMLVDNAAENPRM*KLISVAVHNASPPM Trigger: CATGGGAGGACTAGCGTTGTGCACTGCCACGGAAATAAGCTTCAACATCCTGGGGTTTTCAGCTGCGTTATCCACCAACATTATGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CAA 90 bp | CCCAATGTGACAAGGATGGTGCCAATGGCAGACAGGCTAGTGATTTaGTTTCCAAAAACGATGATGCTGAGCCAGATAGACAAGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PNVTRMVPMADRLVI*FPKTMMLSQIDKAC Trigger: GCACGCCTTGTCTATCTGGCTCAGCATCATCGTTTTTGGAAACAAAATCACTAGCCTGTCTGCCATTGGCACCATCCTTGTCACATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||
| CDS CAA 72 bp | ACAAGGATGGTGCCAATGGCAGACAGGCTAGTGATTTaGTTTCCAAAAACGATGATGCTGAGCCAGATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TRMVPMADRLVI*FPKTMMLSQID Trigger: GTCTATCTGGCTCAGCATCATCGTTTTTGGAAACAAAATCACTAGCCTGTCTGCCATTGGCACCATCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043829.11 ENSMUST00000105608.9 ENSMUST00000118607.2 |
||