Pregenerated sensors for SLC35E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019731Ensembl transcript IDs: ENSMUST00000152080.8
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGCCAGGACCCAGAGCTCCCCTGATGGCCCACCAAGTGTCATGTaGTCAGTCAGGCTGCCAGAATATTCTGAAGCTTCTGAGCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: GARTQSSPDGPPSVM*SVRLPEYSEASELK Trigger: CTTGAGCTCAGAAGCTTCAGAATATTCTGGCAGCCTGACTGAGCACATGACACTTGGTGGGCCATCAGGGGAGCTCTGGGTCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CCA 90 bp | AGTGCTAGGAAGGCAGGCAGGCCTGTACCACTGCGTGGCATTCTGTaGACAGAATCTAAGGCTGCACGAATGCTAGACAGGCACTCTACC | + |
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Preference number: 1 (lower is better) Translates to: SARKAGRPVPLRGIL*TESKAARMLDRHST Trigger: GGTAGAGTGCCTGTCTAGCATTCGTGCAGCCTTAGATTCTGTCCACAGAATGCCACGCAGTGGTACAGGCCTGCCTGCCTTCCTAGCACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR GCA 90 bp | TGGGTATGGCAGCTCCTCCAGGCACGGAGGCTAAGGCTGGAGGAGTaGCTTCTATTCTGTGGTCAGCCTGGTCTAAATAGGCAGATACTA | + |
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Preference number: 1 (lower is better) Translates to: WVWQLLQARRLRLEE*LLFCGQPGLNRQIL Trigger: TAGTATCTGCCTATTTAGACCAGGCTGACCACAGAATAGAAGGCACTCCTCCAGCCTTAGCCTCCGTGCCTGGAGGAGCTGCCATACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CCA 90 bp | TATCCCAGCTGTCCTCTCCATGATATCCCAGATGCCATCTCCTGTTaGCTTCCAGGATTGCAGCCAGGAGGTGCCAGTTCTGTAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: YPSCPLHDIPDAISC*LPGLQPGGASSVEH Trigger: ATGCTCTACAGAACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAACAGGAGATGGCATCTGGGATATCATGGAGAGGACAGCTGGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CCA 90 bp | CAAGAGCATGACAGGTTTCCTGTTTCAGACCCAAGGTTTTGGGGCTaGGGTCTAGCCATGAAGAGCTCACTGCTTGGAGTCCTCCCAACA | + |
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Preference number: 1 (lower is better) Translates to: QEHDRFPVSDPRFWG*GLAMKSSLLGVLPT Trigger: TGTTGGGAGGACTCCAAGCAGTGAGCTCTTCATGGCTAGACCCCAGCCCCAAAACCTTGGGTCTGAAACAGGAAACCTGTCATGCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CCA 90 bp | GGAAAGCAAGAGCATGACAGGTTTCCTGTTTCAGACCCAAGGTTTTaGGGCTGGGGTCTAGCCATGAAGAGCTCACTGCTTGGAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GKQEHDRFPVSDPRF*GWGLAMKSSLLGVL Trigger: GAGGACTCCAAGCAGTGAGCTCTTCATGGCTAGACCCCAGCCCCAAAACCTTGGGTCTGAAACAGGAAACCTGTCATGCTCTTGCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR TCA 90 bp | TCCATCCCATGGCCGACAAGATGTTCCCCAGAGAAACTTAGGTTCTaGGGAAACTGTCATCACCACTCCTTGGCCTTCTGTGCCATCAGG | + |
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Preference number: 1 (lower is better) Translates to: SIPWPTRCSPEKLRF*GNCHHHSLAFCAIR Trigger: CCTGATGGCACAGAAGGCCAAGGAGTGGTGATGACAGTTTCCTCAGAACCTAAGTTTCTCTGGGGAACATCTTGTCGGCCATGGGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CCA 90 bp | ACAAGCAACACTGTACTCGGGTATGAATACCTCCTTCTACCTCTGTaGCTGCAACTTCAGTACCCTTCGGCATTGCCTGCTACCACTGAC | + |
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Preference number: 1 (lower is better) Translates to: TSNTVLGYEYLLLPL*LQLQYPSALPATTD Trigger: GTCAGTGGTAGCAGGCAATGCCGAAGGGTACTGAAGTTGCAGCCACAGAGGTAGAAGGAGGTATTCATACCCGAGTACAGTGTTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR TCA 90 bp | TACCCCTTCCTATCATTTACCTGCTGTCAATTGCCACAATGGCATTaGGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: YPFLSFTCCQLPQWH*AHRLGEVSCFCFKS Trigger: ACTCTTGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATTGACAGCAGGTAAATGATAGGAAGGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR TCA 90 bp | TGCTCTCATATAGCCCAGGCTGGCTTCCAATTCACTATGTTACACTaGACTCCTGATCCTAACTGCCTCAGCCTCCTGAGTAATGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: CSHIAQAGFQFTMLH*TPDPNCLSLLSNGV Trigger: TACTCCATTACTCAGGAGGCTGAGGCAGTTAGGATCAGGAGTTCAGTGTAACATAGTGAATTGGAAGCCAGCCTGGGCTATATGAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR GCA 90 bp | TTTGAATGGACAGATGTAAACTGTGGATCAAGTCTGTTTTGTTGTTaGTCTCATATAGCCCAGGCTGGCTTCCAATTCACTATGTTACAC | + |
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Preference number: 1 (lower is better) Translates to: FEWTDVNCGSSLFCC*SHIAQAGFQFTMLH Trigger: GTGTAACATAGTGAATTGGAAGCCAGCCTGGGCTATATGAGAGCAACAACAAAACAGACTTGATCCACAGTTTACATCTGTCCATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACAAGCCCTCCATCCTTCTaGGCTGTATCCCAGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LCSDRCLRPAFPSEENPTSPPSF*AVSQLS Trigger: GGACAGCTGGGATACAGCCCAGAAGGATGGAGGGCT...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCTCCTCCAGGCACGGAGGCTAAGGCTGGAGGAGTGCCTTCTATTCTGGTTGGCTTCCAGGATTaGAGCCAGGAGGTGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: MAAPPGTEAKAGGVPSILVGFQD*SQEVPV Trigger: AACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAAC...CAGAATAGAAGGCACTCCTCCAGCCTTAGCCTCCGTGCCTGGAGGAGCTGCCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGCTCCTCCAGGCACGGAGGCTAAGGCTGGAGGAGTGCCTTCTATTCTGGGATCGGGTCAGTCCTaGAGAGGGAGAGGTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: MAAPPGTEAKAGGVPSILGSGQS*RGRGEC Trigger: ACATTCACCTCTCCCTCTCCAGGACTGACCCGATCC...CAGAATAGAAGGCACTCCTCCAGCCTTAGCCTCCGTGCCTGGAGGAGCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | GATCCTCCTGAATCTGCTTTAAGAGTGCTAGGAAGGCAGGCAGGCCTGTACCACCTGCTACCACTGACCTaGGAGGGACTGGCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPPESALRVLGRQAGLYHLLPLT*EGLAPA Trigger: TGCTGGAGCCAGTCCCTCCCAGGTCAGTGGTAGCAG...GTGGTACAGGCCTGCCTGCCTTCCTAGCACTCTTAAAGCAGATTCAGGAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGACTTCATGCATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCCCCAGCTGTCTCCTTCTACCTCTGTaGCTGCAACTTCAGTACCCT | + |
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Preference number: 2 (lower is better) Translates to: QDFMHAGKHCSQSGSPSCLLLPL*LQLQYP Trigger: AGGGTACTGAAGTTGCAGCCACAGAGGTAGAAGGAG...ACAGCTGGGGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCATGAAGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CAA 90 bp | CCTCTCCATGATATCCCAGATGCCATCTCCTGTTGGCTTCCAGGATaGCAGCCAGGAGGTGCCAGTTCTGTAGAGCATGTCCCTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: PLHDIPDAISCWLPG*QPGGASSVEHVPTL Trigger: GAGAGTAGGGACATGCTCTACAGAACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAACAGGAGATGGCATCTGGGATATCATGGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCATCACCACTCCTTGGCCTTCTGTGCCATCAGGAGAGTGGGGAGCAGACAACAGCTGTCCTCTCCATaGTATCCCAGATGCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: CHHHSLAFCAIRRVGSRQQLSSP*YPRCHL Trigger: GAGATGGCATCTGGGATATCATGGAGAGGACAGCTG...TTGTCTGCTCCCCACTCTCCTGATGGCACAGAAGGCCAAGGAGTGGTGATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGACTTCATGCATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCCCCAGCTGTGAATCTGGTCTACCCTaGTTGTCTCATCCATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QDFMHAGKHCSQSGSPSCESGLP*LSHPFQ Trigger: CTGGAATGGATGAGACAATCAGGGTAGACCAGATTC...ACAGCTGGGGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCATGAAGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACACAGACCTCTGTAATATaGCAGGGACAACCCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: LCSDRCLRPAFPSEENPTQTSVI*QGQPCT Trigger: TGTACAGGGTTGTCCCTGGCATATTACAGAGGTCTG...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCACTCCTTGGCCTTCTGTaGCATCAGGAGAGTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CHNGIELTGLGKSLASASLLGLL*HQESGE Trigger: CTCCCCACTCTCCTGATGGCACAGAAGGCCAAGGAG...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACATACACAAATGCAGAGTaGCCTCTTAGTGGAGGCGTA | + |
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Preference number: 2 (lower is better) Translates to: LCSDRCLRPAFPSEENPTYTNAE*PLSGGV Trigger: TACGCCTCCACTAAGAGGCCACTCTGCATTTGTGTA...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCGACCCAGAGCTCCCCTaGTGGCCCACCAAGTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LGKSLASASRVPKTIGMGDPELP*WPTKCH Trigger: ATGACACTTGGTGGGCCATCAGGGGAGCTCTGGGTC...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACATGTGCTCAGTCAGGCTaGCAGAATATTCTGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LCSDRCLRPAFPSEENPTCAQSG*QNILKL Trigger: AAGCTTCAGAATATTCTGGCAGCCTGACTGAGCACA...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTGTGCCATCAGGAGAGTaGGGAGCAGACAAGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NCHNGIELTGLGKSLASAVPSGE*GADKLL Trigger: GAGCAGCTTGTCTGCTCCCCACTCTCCTGATGGCAC...AGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CAA 90 bp | ATGCATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCCCCAGCTGTTaGTCTTTTGATCCGAGAATCTGGTCTACCCTGATTGTCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: MHAGKHCSQSGSPSC*SFDPRIWSTLIVSS Trigger: GGATGAGACAATCAGGGTAGACCAGATTCTCGGATCAAAAGACAAACAGCTGGGGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAGATGCCATCTCCTGTTaGCTTCCAGGATTGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CHNGIELTGLGKSLASASDAISC*LPGLQP Trigger: TGGCTGCAATCCTGGAAGCCAACAGGAGATGGCATC...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGCTCCTCCAGGCACGGAGGCTAAGGCTGGAGGAGTGCCTTCTATTCTGTTCCTATCATTTACCTaGTGTCAATTGCCACAATGG | + |
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Preference number: 2 (lower is better) Translates to: MAAPPGTEAKAGGVPSILFLSFT*CQLPQW Trigger: CCATTGTGGCAATTGACAGCAGGTAAATGATAGGAA...CAGAATAGAAGGCACTCCTCCAGCCTTAGCCTCCGTGCCTGGAGGAGCTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGACTTCATGCATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCCCCAGCTGTTCCCATATTTTGAAATaGGACAAGATGGTTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: QDFMHAGKHCSQSGSPSCSHILK*DKMVSI Trigger: GATGGAAACCATCTTGTCTCATTTCAAAATATGGGA...ACAGCTGGGGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCATGAAGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTTGGAGTCCTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTGCTATTGCCTGCTACCACTaGCCTGGGAGGGACTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HCLESSQHTEKSSSMYFAIACYH*PGRDWL Trigger: GAGCCAGTCCCTCCCAGGTCAGTGGTAGCAGGCAAT...AGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCCCACCAAGTGTCATGTaGTCAGTCAGGCTGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGKSLASASRVPKTIGMGPPSVM*SVRLPE Trigger: TTCTGGCAGCCTGACTGAGCACATGACACTTGGTGG...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAGTTTGTGGGTGTCCATaGTATGATCACATCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CHNGIELTGLGKSLASASVCGCP*YDHILQ Trigger: CTGCAGGATGTGATCATAGCATGGACACCCACAAAC...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATGCATGCAAGGGCTCTGTATCATTaGTGGGATCAGGTAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: WSNIRVCSAEGGQDFMHARALYH*WDQVMP Trigger: TGGCATTACCTGATCCCACCAATGATACAGAGCCCT...TGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAATGTTACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATGCATGCAGAGAAACTTAGGTTCTaGGGAAACTGTCATCACCAC | + |
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Preference number: 2 (lower is better) Translates to: WSNIRVCSAEGGQDFMHAEKLRF*GNCHHH Trigger: GTGGTGATGACAGTTTCCTCAGAACCTAAGTTTCTC...TGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAATGTTACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCATTATGTAACCCAGACTGACTTTAAACCCATGGCCATCTTCCTGCCTCAGACCAGGGTCTCTCTGTaGTTCTTTTCTGCCCCGAGT | + |
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Preference number: 2 (lower is better) Translates to: SHYVTQTDFKPMAIFLPQTRVSL*FFSAPS Trigger: ACTCGGGGCAGAAAAGAACCACAGAGAGACCCTGGT...CTGAGGCAGGAAGATGGCCATGGGTTTAAAGTCAGTCTGGGTTACATAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCGCTCTGTATCATTGGTaGGATCAGGTAATGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: LGKSLASASRVPKTIGMGALYHW*DQVMPP Trigger: GGGTGGCATTACCTGATCCCACCAATGATACAGAGC...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CAA 90 bp | ATACCCCTTCCTATCATTTACCTGCTGTCAATTGCCACAATGGCATaGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: IPLPIIYLLSIATMA*SSQAWGSLLLLLQE Trigger: CTCTTGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATTGACAGCAGGTAAATGATAGGAAGGGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTTGGAGTCCTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTGCTAGGACTGGGGTGCCATaGTGTACCTGTGAGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: HCLESSQHTEKSSSMYFARTGVP*CTCELS Trigger: ACTGAGCTCACAGGTACATCATGGCACCCCAGTCCT...AGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCTTGGAGTCCTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTGCTTTGGGCAGCACTAGCTaGAAGTGGCCAACTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HCLESSQHTEKSSSMYFALGSTS*KWPTAL Trigger: CAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAA...AGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTAAGCCCAGGCTGGTCTaGAACTTACTTTGTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: NCHNGIELTGLGKSLASAKPRLV*NLLCRE Trigger: TTCTCTACAAAGTAAGTTCCAGACCAGCCTGGGCTT...AGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR TCA 72 bp | ATCCCAGTGCTCGGGAGGCAGAGGCAGGCGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPVLGRQRQADF*VRGQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGCACTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATGCATGCACCCCCAGGCCCTGCTTaGGCACCCACAAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: WSNIRVCSAEGGQDFMHAPPGPA*APTRQR Trigger: CCTCTGCCTTGTGGGTGCCAAAGCAGGGCCTGGGGG...TGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAATGTTACTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CAA 90 bp | ACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTGGCCAACTGCCTTGGGGTGTTGGCTTCCAGGATaGCAGCCAGGAGGTGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TISLPLGSTSCKWPTALGCWLPG*QPGGAS Trigger: ACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAACA...CCCCAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR GCA 72 bp | TACCTCTGTGGCTGCAACTTCAGTACCCTTCGGCATTaGCTGCTACCACTGACCTGGGAGGGACTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: YLCGCNFSTLRH*LLPLTWEGLAP Trigger: TGGAGCCAGTCCCTCCCAGGTCAGTGGTAGCAGGCAATGCCGAAGGGTACTGAAGTTGCAGCCACAGAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR GCA 72 bp | TTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATaGATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: FVYAVLRVARTS*MQVSTVARAAA Trigger: GGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR GCA 72 bp | CTGAGGAAACTGTCATCACCACTCCTTGGCCTTCTGTaGCATCAGGAGAGTGGGGAGCAGACAAGCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LRKLSSPLLGLL*HQESGEQTSCS Trigger: GGAGCAGCTTGTCTGCTCCCCACTCTCCTGATGGCACAGAAGGCCAAGGAGTGGTGATGACAGTTTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACAGCTTGGGGAAGTCTCTaGCTTCTGCTTCAAGAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LCSDRCLRPAFPSEENPTAWGSL*LLLQEY Trigger: GTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAAGC...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | CCATCCTTCTGGGCTGTATCCCAGCTGTCCTCTCCATaGTATCCCAGATGCCATCTCCTGTTGGCTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSFWAVSQLSSP*YPRCHLLLASR Trigger: CCTGGAAGCCAACAGGAGATGGCATCTGGGATATCATGGAGAGGACAGCTGGGATACAGCCCAGAAGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | TGCTTTGGCACCCACAAGGCAGAGGAAGGTCACAGCTaGTGGGCTGATGGTCACTATAAGTCTGCCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CFGTHKAEEGHS*WADGHYKSALG Trigger: CCCAAGGGCAGACTTATAGTGACCATCAGCCCATCAGCTGTGACCTTCCTCTGCCTTGTGGGTGCCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | AAGGCAGGCAGGCCTGTACCACTGCGTGGCATTCTGTaGACAGAATCTAAGGCTGCACGAATGCTAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KAGRPVPLRGIL*TESKAARMLDR Trigger: CCTGTCTAGCATTCGTGCAGCCTTAGATTCTGTCCACAGAATGCCACGCAGTGGTACAGGCCTGCCTGCCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCCTCCTGAGTAATGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCTGTCATCACCACTCCTaGGCCTTCTGTGCCATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSNGVTFVYAVLRVACHHHS*AFCAIR Trigger: CCTGATGGCACAGAAGGCCAAGGAGTGGTGATGACA...GGCCACCCTCAGCACTGCATACACGAATGTTACTCCATTACTCAGGAGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | ACCCAGAGCTCCCCTGATGGCCCACCAAGTGTCATGTaGTCAGTCAGGCTGCCAGAATATTCTGAAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQSSPDGPPSVM*SVRLPEYSEAS Trigger: AGAAGCTTCAGAATATTCTGGCAGCCTGACTGAGCACATGACACTTGGTGGGCCATCAGGGGAGCTCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | ATGGTCACTATAAGTCTGCCCTTGGGCAGCACTAGCTaGAAGTGGCCAACTGCCTTGGGGTATTCTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MVTISLPLGSTS*KWPTALGYSRA Trigger: AGCCCTAGAATACCCCAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGTGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | TGTCCTCTCCATGATATCCCAGATGCCATCTCCTGTTaGCTTCCAGGATTGCAGCCAGGAGGTGCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CPLHDIPDAISC*LPGLQPGGASS Trigger: AGAACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAACAGGAGATGGCATCTGGGATATCATGGAGAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | GGAGGCGTAAACCAGGGTCTCTCTGTGGTTCTTTTCTaGCCCGAGTTTGTGGGTGTCCATGCTATGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: GGVNQGLSVVLF*PEFVGVHAMIT Trigger: TGTGATCATAGCATGGACACCCACAAACTCGGGGCAGAAAAGAACCACAGAGAGACCCTGGTTTACGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | ACTGCCTTGGGGTATTCTAGGGCTCTGTATCATTGGTaGGATCAGGTAATGCCACCCATGTCAGCCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TALGYSRALYHW*DQVMPPMSALH Trigger: ATGGAGGGCTGACATGGGTGGCATTACCTGATCCCACCAATGATACAGAGCCCTAGAATACCCCAAGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | ACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTaGCCAACTGCCTTGGGGTATTCTAGGGCTCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: TISLPLGSTSCK*PTALGYSRALY Trigger: ATACAGAGCCCTAGAATACCCCAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | GAGCATGACAGGTTTCCTGTTTCAGACCCAAGGTTTTaGGGCTGGGGTCTAGCCATGAAGAGCTCACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EHDRFPVSDPRF*GWGLAMKSSLL Trigger: AAGCAGTGAGCTCTTCATGGCTAGACCCCAGCCCCAAAACCTTGGGTCTGAAACAGGAAACCTGTCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCCTCCTGAGTAATGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCATTGAGCTCACAGGCTaGGGGAAGTCTCTTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSNGVTFVYAVLRVAIELTG*GKSLAS Trigger: AGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAAT...GGCCACCCTCAGCACTGCATACACGAATGTTACTCCATTACTCAGGAGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | CCTGGTGTCCCATTTGCCAGAGCACAGTTAAAACCCTaGTACACATGCGGTCTCCTCACTGACAAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PGVPFARAQLKP*YTCGLLTDKQH Trigger: GTGTTGCTTGTCAGTGAGGAGACCGCATGTGTATCAGGGTTTTAACTGTGCTCTGGCAAATGGGACACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | CTGATGGCCCACCAAGTGTCATGTGCTCAGTCAGGCTaGCAGAATATTCTGAAGCTTCTGAGCTCAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LMAHQVSCAQSG*QNILKLLSSRR Trigger: CCTTCTTGAGCTCAGAAGCTTCAGAATATTCTGGCAGCCTGACTGAGCACATGACACTTGGTGGGCCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | CATCTTCCTGCCTCAGCCCCTCGATATATGCCACTATaGCAGGTCCCTAAACTGATCATTTTCCTGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLPASAPRYMPL*QVPKLIIFLRQ Trigger: CTGCCTCAGGAAAATGATCAGTTTAGGGACCTGCCATAGTGGCATATATCGAGGGGCTGAGGCAGGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | TTGGGGCTGGGGTCTAGCCATGAAGAGCTCACTGCTTaGAGTCCTCCCAACATACAGAGAAATCAAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LGLGSSHEELTA*SPPNIQRNQVP Trigger: TGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTGAGCTCTTCATGGCTAGACCCCAGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATGCATGCAGTGAGACGGGCCATTTaGCTCCCTGAAAAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: WSNIRVCSAEGGQDFMHAVRRAI*LPEKGK Trigger: TTTTCCTTTTTCAGGGAGCAAAATGGCCCGTCTCAC...TGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAATGTTACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | TGGCCGACAAGATGTTCCCCAGAGAAACTTAGGTTCTaGGGAAACTGTCATCACCACTCCTTGGCCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WPTRCSPEKLRF*GNCHHHSLAFC Trigger: ACAGAAGGCCAAGGAGTGGTGATGACAGTTTCCTCAGAACCTAAGTTTCTCTGGGGAACATCTTGTCGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | ACAAATGCTAAGGTCAGCCTGGGAGGCTTAGTGGGATaGCTCCATCTGGATGTGGTGCCCATGGTTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNAKVSLGGLVG*LHLDVVPMVLK Trigger: CTTTAAAACCATGGGCACCACATCCAGATGGAGTCATCCCACTAAGCCTCCCAGGCTGACCTTAGCATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | TCAGGAGTTAAGGACTGGGGTGCCATGATGTACCTGTaGGCTCAGTTCTTAGCAACAGAGGAGGCACAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SGVKDWGAMMYL*AQFLATEEAQM Trigger: CATTTGTGCCTCCTCTGTTGCTAAGAACTGAGCTCACAGGTACATCATGGCACCCCAGTCCTTAACTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | ATAGCCCAGGCTGGCTTCCAATTCACTATGTTACACTaGACTCCTGATCCTAACTGCCTCAGCCTCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: IAQAGFQFTMLH*TPDPNCLSLLS Trigger: ACTCAGGAGGCTGAGGCAGTTAGGATCAGGAGTTCAGTGTAACATAGTGAATTGGAAGCCAGCCTGGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | GGAGGGACTGGCTCCAGCAACAAACATCCCATATTTTaGAATGAGACAAGATGGTTTCCATCCCATGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GGTGSSNKHPIF*NETRWFPSHGR Trigger: TCGGCCATGGGATGGAAACCATCTTGTCTCATTTCAAAATATGGGATGTTTGTTGCTGGAGCCAGTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CCA 72 bp | CTGTCAATTGCCACAATGGCATTGAGCTCACAGGCTTaGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSIATMALSSQA*GSLLLLLQEYL Trigger: TAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | ATTGATACCCCTTCCTATCATTTACCTGCTGTCAATTaGCACAATGGCATTGAGCTCACAGGCTTGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IDTPSYHLPAVN*HNGIELTGLGK Trigger: CTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATTGACAGCAGGTAAATGATAGGAAGGGGTATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR TCA 72 bp | GACTGGCTCCAGCAACAAACATCCCATATTTTGAAATaGGACAAGATGGTTTCCATCCCATGGCCGACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DWLQQQTSHILK*DKMVSIPWPTR Trigger: TCTTGTCGGCCATGGGATGGAAACCATCTTGTCTCATTTCAAAATATGGGATGTTTGTTGCTGGAGCCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR GCA 72 bp | CTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTaGTGCCTTAGTTCATCTGGCTCCTCTACTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPTYREIKFHVF*CLSSSGSSTLS Trigger: TGACAGAGTAGAGGAGCCAGATGAACTAAGGCAGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACAGGCACAGCGACACGGTaGCCGGGAACGGGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSDRCLRPAFPSEENPTGTATR*PGTGRR Trigger: GCGCCTTCCCGTTCCCGGTCACCGTGTCGCTGTGCC...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGTCAGGGTCACCCATAGAGACCTCTGCAGTGACAGGTGTCTCAGGCCAGAGGCCAGGTCACTGCTaGCCAGGAAGGTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AESGSPIETSAVTGVSGQRPGHC*PGRWRG Trigger: ACCTCTCCACCTTCCTGGTCAGCAGTGACCTGGCCT...CTGGCCTGAGACACCTGTCACTGCAGAGGTCTCTATGGGTGACCCTGACTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CAA 72 bp | CTACCTCTGTGGCTGCAACTTCAGTACCCTTCGGCATaGCCTGCTACCACTGACCTGGGAGGGACTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLWLQLQYPSA*PATTDLGGTGS Trigger: GGAGCCAGTCCCTCCCAGGTCAGTGGTAGCAGGCAATGCCGAAGGGTACTGAAGTTGCAGCCACAGAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR TCA 90 bp | GATCCTCCTGAATCTGCTTTAAGAGTGCTAGGAAGGCAGGCAGGCCTGTACCACGCACCTTCCAGATGCTaGCGTGCGCCGACACCGACG | + |
|
Preference number: 4 (lower is better) Translates to: DPPESALRVLGRQAGLYHAPSRC*RAPTPT Trigger: CGTCGGTGTCGGCGCACGTCAGCATCTGGAAGGTGC...GTGGTACAGGCCTGCCTGCCTTCCTAGCACTCTTAAAGCAGATTCAGGAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACATGCCCAACACATTGGTaGTGGTCACTGGGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSDRCLRPAFPSEENPTCPTHW*WSLGCA Trigger: TGCGCAACCCAGTGACCAGCACCAATGTGTTGGGCA...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTGGCCAACTGCCTTGGGGGAGAGCATAGGAGTTTaGGTGGCCCTGGCGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TISLPLGSTSCKWPTALGESIGV*VALAAV Trigger: TACAGCCGCCAGGGCCACCCAAACTCCTATGCTCTC...CCCCAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTCCTGAGTAATGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCCACAGCGCTAGGATGTaGCACAGCGACACGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSNGVTFVYAVLRVAHSARM*HSDTVT Trigger: GGTCACCGTGTCGCTGTGCCACATCCTAGCGCTGTG...GGCCACCCTCAGCACTGCATACACGAATGTTACTCCATTACTCAGGAGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACTTCATGCATGCAGGTAAGCACTGTAGCCAGAGCGGCAGCCCCAGCTGTTGCTCAGGTCTGACGTaGAGATGGGAAGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDFMHAGKHCSQSGSPSCCSGLT*RWEEDG Trigger: GCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCA...ACAGCTGGGGCTGCCGCTCTGGCTACAGTGCTTACCTGCATGCATGAAGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTGATGGTCACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTGGTCAAAATCACCTTGTTaGCCACGTTACCGCCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DGLMVTISLPLGSTSCKWSKSPC*PRYRPR Trigger: GCGCGGGCGGTAACGTGGTCAACAAGGTGATTTTGA...CCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGTGACCATCAGCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTCCTGAGTAATGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCACTGGGCTCCGCAAGTaGTCTCTGCTGCTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSNGVTFVYAVLRVATGLRK*SLLLRS Trigger: AGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGT...GGCCACCCTCAGCACTGCATACACGAATGTTACTCCATTACTCAGGAGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCAGGACTTCATGCATGCAAGCAGCCGCAGGTGGTaGATCCTGGAGTCCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSNIRVCSAEGGQDFMHASSRRW*ILESLN Trigger: GTTGAGGGACTCCAGGATCCACCACCTGCGGCTGCT...TGCATGCATGAAGTCCTGGCCACCCTCAGCACTGCATACACGAATGTTACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTGATGGTCACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTGGAGGATATTGCGGTACTaGAAGTCACCCTGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGLMVTISLPLGSTSCKWRILRY*KSPCWG Trigger: CCCCCAGCAGGGTGACTTCCAGTACCGCAATATCCT...CCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGTGACCATCAGCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CAA 72 bp | ACAGCTGATGGGCTGATGGTCACTATAAGTCTGCCCTaGGGCAGCACTAGCTGCAAGTGGCCAACTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TADGLMVTISLP*GSTSCKWPTAL Trigger: CAAGGCAGTTGGCCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGTGACCATCAGCCCATCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCTGGGCATGGTGGCCTTaGCGGTGTGCGCGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLASASRVPKTIGMGWAWWP*RCARRR Trigger: TCTCCTACGCGCACACCGTCAAGGCCACCATGCCCA...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR GCA 90 bp | AATTGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTTCCAGATGCTGACGTaGGCCGACACCGACGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NCHNGIELTGLGKSLASAFQMLT*ADTDAK Trigger: CTTCGCGTCGGTGTCGGCGCACGTCAGCATCTGGAA...AGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAGAGTTTGGGTGGCCCTaGCGGCTGTATTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHNGIELTGLGKSLASASEFGWP*RLYWKW Trigger: CCACTTCCAATACAGCCGCCAGGGCCACCCAAACTC...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| 3UTR CAA 72 bp | GATATCCCAGATGCCATCTCCTGTTGGCTTCCAGGATaGCAGCCAGGAGGTGCCAGTTCTGTAGAGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DIPDAISCWLPG*QPGGASSVEHV Trigger: GACATGCTCTACAGAACTGGCACCTCCTGGCTGCAATCCTGGAAGCCAACAGGAGATGGCATCTGGGATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCACCGACGCGAAGTACTTaGCAAAGGCAAGCGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CHNGIELTGLGKSLASASPTRST*QRQAAV Trigger: TACTGCCGCTTGCCTTTGGCAAGTACTTCGCGTCGG...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTCAGGGTCACCCATAGAGACCTCTGCAGTGACAGGTGTCTCAGGCCAGGTGACAGGTATACCTTaGTGCTCTGTTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AESGSPIETSAVTGVSGQVTGIP*CSVSPS Trigger: TGAAGGAGAAACAGAGCACCAAGGTATACCTGTCAC...CTGGCCTGAGACACCTGTCACTGCAGAGGTCTCTATGGGTGACCCTGACTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTCCTGAGTAATGGAGTAACATTCGTGTATGCAGTGCTGAGGGTGGCCGCAGGTGGTGGATCCTaGAGTCCCTCAACACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSNGVTFVYAVLRVAAGGGS*SPSTPF Trigger: AAAAGGTGTTGAGGGACTCCAGGATCCACCACCTGC...GGCCACCCTCAGCACTGCATACACGAATGTTACTCCATTACTCAGGAGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCAGGAAGACACCCAGAATaGCGGTCATCATGCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CHNGIELTGLGKSLASASGRHPE*RSSCPT Trigger: TGTTGGGCATGATGACCGCCATTCTGGGTGTCTTCC...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCATGAAGAACACGGCGTaGCAGCCCAGGATGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSLASASRVPKTIGMGMKNTA*QPRMLS Trigger: GCTCAACATCCTGGGCTGCCACGCCGTGTTCTTCAT...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR TCA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCGATGATGGGGACCAGTaGCAGGTATACCTTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LGKSLASASRVPKTIGMGDDGDQ*QVYLGA Trigger: AGCACCAAGGTATACCTGTCACTGGTCCCCATCATC...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR TCA 90 bp | TGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTCATTGGAGAAGATGTTCTaGAGGGAGAAGCATAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: CHNGIELTGLGKSLASASLEKMF*REKHSV Trigger: CACGCTATGCTTCTCCCTTCAGAACATCTTCTCCAA...TGAAGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR TCA 90 bp | CACTGCTTGGAGTCCTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTGCTAGTTGCAGAAGCCACTaGCTGCCAAGAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HCLESSQHTEKSSSMYFASCRSH*LPRAAA Trigger: CGCTGCTGCTCTTGGCAGTCAGTGGCTTCTGCAACT...AGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CCA 90 bp | TCTCATTATGTAACCCAGACTGACTTTAAACCCATGGCCATCTTCCTGCCTCAGTCATGCCCAACACATTaGTGCTGGTCACTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SHYVTQTDFKPMAIFLPQSCPTH*CWSLGC Trigger: GCAACCCAGTGACCAGCACCAATGTGTTGGGCATGA...CTGAGGCAGGAAGATGGCCATGGGTTTAAAGTCAGTCTGGGTTACATAATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| 3UTR CAA 72 bp | CCTATCATTTACCTGCTGTCAATTGCCACAATGGCATaGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PIIYLLSIATMA*SSQAWGSLLLL Trigger: CAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATTGACAGCAGGTAAATGATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CCA 90 bp | ATCCATTCCAGTGTTCATACTTGCTGTGAGCCTATGAACAGAACTAAATATCCCCCCTGGCGGCTGTATTaGAAGTGGTCTGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: IHSSVHTCCEPMNRTKYPPWRLY*KWSVRR Trigger: CCTCCTCACAGACCACTTCCAATACAGCCGCCAGGG...GGGATATTTAGTTCTGTTCATAGGCTCACAGCAAGTATGAACACTGGAATGGAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CCA 90 bp | CACTGCTTGGAGTCCTCCCAACATACAGAGAAATCAAGTTCCATGTATTTTGCTCGGCTGTATTGGAAGTaGTCTGTGAGGAGGATATTG | + |
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Preference number: 4 (lower is better) Translates to: HCLESSQHTEKSSSMYFARLYWK*SVRRIL Trigger: CAATATCCTCCTCACAGACCACTTCCAATACAGCCG...AGCAAAATACATGGAACTTGATTTCTCTGTATGTTGGGAGGACTCCAAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 90 bp | CAGGCGCGCAGCAGCGGCGGCAGCCCCGCGCACAGCGCTAGGATGTaGCACAGCGACACGGTGACCGGGAACGGGAAGGCGCTCAAAATC | + |
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Preference number: 5 (lower is better) Translates to: QARSSGGSPAHSARM*HSDTVTGNGKALKI Trigger: GATTTTGAGCGCCTTCCCGTTCCCGGTCACCGTGTCGCTGTGCCACATCCTAGCGCTGTGCGCGGGGCTGCCGCCGCTGCTGCGCGCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS TCA 90 bp | GGGCTTTTCCACTGGGCTCCGCAAGTGCTCTCTGCTGCTCAGGTCTaGCGTGGAGATGGGAAGAAGATGGCGCCGGGCCTGCTGATTCGC | + |
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Preference number: 5 (lower is better) Translates to: GLFHWAPQVLSAAQV*RGDGKKMAPGLLIR Trigger: GCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGTGGAAAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS GCA 90 bp | CACCATTGTGGGGCTTTTCCACTGGGCTCCGCAAGTGCTCTCTGCTaGTCAGGTCTGACGTGGAGATGGGAAGAAGATGGCGCCGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HHCGAFPLGSASALC*SGLTWRWEEDGAGP Trigger: AGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGTGGAAAAGCCCCACAATGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS GCA 90 bp | ATGCACCATTGTGGGGCTTTTCCACTGGGCTCCGCAAGTGCTCTCTaGTGCTCAGGTCTGACGTGGAGATGGGAAGAAGATGGCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: MHHCGAFPLGSASAL*CSGLTWRWEEDGAG Trigger: CCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGTGGAAAAGCCCCACAATGGTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 90 bp | CTGGGCTCCGCAAGTGCTCTCTGCTGCTCAGGTCTGACGTGGAGATaGGAAGAAGATGGCGCCGGGCCTGCTGATTCGCATCATACTTGG | + |
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Preference number: 5 (lower is better) Translates to: LGSASALCCSGLTWR*EEDGAGPADSHHTW Trigger: CCAAGTATGATGCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 90 bp | TTTCCACTGGGCTCCGCAAGTGCTCTCTGCTGCTCAGGTCTGACGTaGAGATGGGAAGAAGATGGCGCCGGGCCTGCTGATTCGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: FPLGSASALCCSGLT*RWEEDGAGPADSHH Trigger: ATGATGCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGTGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | ATGGCAGCTCCTCCAGGCACGGAGGCTAAGGCTGGAGGAGTGCCTTCTATTCTGACCGACGCGAAGTACTaGCCAAAGGCAAGCGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: MAAPPGTEAKAGGVPSILTDAKY*PKASGS Trigger: ACTGCCGCTTGCCTTTGGCAAGTACTTCGCGTCGGT...CAGAATAGAAGGCACTCCTCCAGCCTTAGCCTCCGTGCCTGGAGGAGCTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | GATGGGCTGATGGTCACTATAAGTCTGCCCTTGGGCAGCACTAGCTGCAAGTGGGCCCTGGCGGCTGTATaGGAAGTGGTCTGTGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: DGLMVTISLPLGSTSCKWALAAV*EVVCEE Trigger: CTCCTCACAGACCACTTCCAATACAGCCGCCAGGGC...CCACTTGCAGCTAGTGCTGCCCAAGGGCAGACTTATAGTGACCATCAGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | AATTGCCACAATGGCATTGAGCTCACAGGCTTGGGGAAGTCTCTTGCTTCTGCTTGGCAGCCCAGGATGTaGAGCAGCCGCAGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: NCHNGIELTGLGKSLASAWQPRM*SSRRWW Trigger: CCACCACCTGCGGCTGCTCAACATCCTGGGCTGCCA...AGCAGAAGCAAGAGACTTCCCCAAGCCTGTGAGCTCAATGCCATTGTGGCAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS TCA 90 bp | CTCAGGTCTGACGTGGAGATGGGAAGAAGATGGCGCCGGGCCTGCTaGTTCGCATCATACTTGGTCTTGTTGTACAGGAAGACACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LRSDVEMGRRWRRAC*FASYLVLLYRKTPR Trigger: TCTGGGTGTCTTCCTGTACAACAAGACCAAGTATGATGCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCAGTGACAGGTGTCTCAGGCCAGCCTTCCCCAGTGAGGAGAACCCAACAGCATCATACTTGGTCTaGTTGTACAGGAAGACACCC | + |
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Preference number: 5 (lower is better) Translates to: LCSDRCLRPAFPSEENPTASYLV*LYRKTP Trigger: GGGTGTCTTCCTGTACAACAAGACCAAGTATGATGC...TGTTGGGTTCTCCTCACTGGGGAAGGCTGGCCTGAGACACCTGTCACTGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 90 bp | AGATGGGAAGAAGATGGCGCCGGGCCTGCTGATTCGCATCATACTTaGTCTTGTTGTACAGGAAGACACCCAGAATGGCGGTCATCATGC | + |
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Preference number: 5 (lower is better) Translates to: RWEEDGAGPADSHHT*SCCTGRHPEWRSSC Trigger: GCATGATGACCGCCATTCTGGGTGTCTTCCTGTACAACAAGACCAAGTATGATGCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | CTGATCATTTTCCTGAGGCAGCTTCTCATTGAAGCCCAGGCTGGTCTGGAACTTATCATGCCCAACACATaGGTGCTGGTCACTGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LIIFLRQLLIEAQAGLELIMPNT*VLVTGL Trigger: CAACCCAGTGACCAGCACCAATGTGTTGGGCATGAT...AAGTTCCAGACCAGCCTGGGCTTCAATGAGAAGCTGCCTCAGGAAAATGATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | TCTCATTATGTAACCCAGACTGACTTTAAACCCATGGCCATCTTCCTGCCTCAGGGGAACAATGCACCATaGTGGGGCTTTTCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: SHYVTQTDFKPMAIFLPQGNNAP*WGFSTG Trigger: CCCAGTGGAAAAGCCCCACAATGGTGCATTGTTCCC...CTGAGGCAGGAAGATGGCCATGGGTTTAAAGTCAGTCTGGGTTACATAATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | TTGGGGAAGTCTCTTGCTTCTGCTTCAAGAGTACCTAAGACCATAGGTATGGGCACATTCTGTGCAAAGTaGCAGAAGCCACTGACTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGKSLASASRVPKTIGMGTFCAK*QKPLTA Trigger: GGCAGTCAGTGGCTTCTGCAACTTTGCACAGAATGT...GCCCATACCTATGGTCTTAGGTACTCTTGAAGCAGAAGCAAGAGACTTCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS-3UTR CAA 90 bp | CTGATCATTTTCCTGAGGCAGCTTCTCATTGAAGCCCAGGCTGGTCTGGAACTTTCATACTTGGTCTTGTaGTACAGGAAGACACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LIIFLRQLLIEAQAGLELSYLVL*YRKTPR Trigger: TCTGGGTGTCTTCCTGTACAACAAGACCAAGTATGA...AAGTTCCAGACCAGCCTGGGCTTCAATGAGAAGCTGCCTCAGGAAAATGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 72 bp | AGCAGCGGCGGCAGCCCCGCGCACAGCGCTAGGATGTaGCACAGCGACACGGTGACCGGGAACGGGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SSGGSPAHSARM*HSDTVTGNGKA Trigger: CGCCTTCCCGTTCCCGGTCACCGTGTCGCTGTGCCACATCCTAGCGCTGTGCGCGGGGCTGCCGCCGCTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS TCA 72 bp | CACTGGGCTCCGCAAGTGCTCTCTGCTGCTCAGGTCTaGCGTGGAGATGGGAAGAAGATGGCGCCGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HWAPQVLSAAQV*RGDGKKMAPGL Trigger: CAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCCCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 72 bp | GGCTCCGCAAGTGCTCTCTGCTGCTCAGGTCTGACGTaGAGATGGGAAGAAGATGGCGCCGGGCCTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GSASALCCSGLT*RWEEDGAGPAD Trigger: ATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGCGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CAA 72 bp | GTGACCGGGAACGGGAAGGCGCTCAAAATCACCTTGTaGACCACGTTACCGCCCGCGCTCAGCGCGTACCAT | + |
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Preference number: 6 (lower is better) Translates to: VTGNGKALKITL*TTLPPALSAYH Trigger: ATGGTACGCGCTGAGCGCGGGCGGTAACGTGGTCAACAAGGTGATTTTGAGCGCCTTCCCGTTCCCGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CAA 90 bp | AGCGACACGGTGACCGGGAACGGGAAGGCGCTCAAAATCACCTTGTaGACCACGTTACCGCCCGCGCTCAGCGCGTACCATAGTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: SDTVTGNGKALKITL*TTLPPALSAYHSRH Trigger: GTGTCTACTATGGTACGCGCTGAGCGCGGGCGGTAACGTGGTCAACAAGGTGATTTTGAGCGCCTTCCCGTTCCCGGTCACCGTGTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 72 bp | GCAAGTGCTCTCTGCTGCTCAGGTCTGACGTGGAGATaGGAAGAAGATGGCGCCGGGCCTGCTGATTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: ASALCCSGLTWR*EEDGAGPADSH Trigger: ATGCGAATCAGCAGGCCCGGCGCCATCTTCTTCCCATCTCCACGTCAGACCTGAGCAGCAGAGAGCACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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| CDS CCA 72 bp | TATTGGAAGTGGTCTGTGAGGAGGATATTGCGGTACTaGAAGTCACCCTGCTGGGGGAACAATGCACCATTG | + |
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Preference number: 6 (lower is better) Translates to: YWKWSVRRILRY*KSPCWGNNAPL Trigger: CAATGGTGCATTGTTCCCCCAGCAGGGTGACTTCCAGTACCGCAATATCCTCCTCACAGACCACTTCCAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152080.8 |
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