Pregenerated sensors for SLC35D3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050473Ensembl transcript IDs: ENSMUST00000059805.6
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTGAACTTACTAAGTGATACCATCATTACTACAAGCCATCTTTaGAAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PLNLLSDTIITTSHL*KGWLRDSWYMQIFG Trigger: ACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAAGTTCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CCA 90 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTGGAAGGGGTaGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTAT | + |
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Preference number: 1 (lower is better) Translates to: LLSDTIITTSHLWKG*LRDSWYMQIFGYDY Trigger: ATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTTTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGTTTGGAAGGGGTGGCTaGGGGACTCTTGGTACATGC | + |
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Preference number: 2 (lower is better) Translates to: TEFWGVQCRPRWSVSLWLFGRGG*GTLGTC Trigger: GCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAA...CAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAAACTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTTTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGATTTGGTTAAGCACCTaGACAGGTCTCTTCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TEFWGVQCRPRWSVSLWLIWLST*TGLFFL Trigger: CAGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAAT...CAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAAACTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR GCA 90 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTGGAAGGGGTGGCTGAGGGTCCCTTTCAGCTCTTaGATCTCTAACCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LLSDTIITTSHLWKGWLRVPFSS*ISNPHP Trigger: GGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGAC...CCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGACGGTCTCTTCTTTCTGTaGCACCTCAGGCAAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: GWLRDSWYMQIFGYDYKDGLFFL*HLRQSP Trigger: GGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACC...GTCTTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR GCA 90 bp | GACTTCATAATCAAAGCTAGGAACCCATGTCTTCAAAATAGCTTCAACATTTCCGGGACTCTTGGTACATaGAGATATTTGGTTATGATT | + |
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Preference number: 2 (lower is better) Translates to: DFIIKARNPCLQNSFNISGTLGT*RYLVMI Trigger: AATCATAACCAAATATCTGCATGTACCAAGAGTCCC...GGAAATGTTGAAGCTATTTTGAAGACATGGGTTCCTAGCTTTGATTATGAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGTTTTACAGTGGCTGAGGGACTCTaGGTACATGCAGATATTTGG | + |
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Preference number: 3 (lower is better) Translates to: FGVCSADQGGLFPSGCFTVAEGL*VHADIW Trigger: CCAAATATCTGCATGTACCAAGAGTCCCTCAGCCAC...TGTAAAACAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CCA 72 bp | ATGTCCAGGAGTCTGAAGCTGAAGTCGCTTTTGATTTaGTTAAGCACCTGCACAGGTCTCTTCTTTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: MSRSLKLKSLLI*LSTCTGLFFLW Trigger: CCACAGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTCAGACTCCTGGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR TCA 72 bp | CCATCATTACTACAAGCCATCTTTGGAAGGGGTGGCTaGGGGACTCTTGGTACATGCAGATATTTGGTTATG | + |
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Preference number: 3 (lower is better) Translates to: PSLLQAIFGRGG*GTLGTCRYLVM Trigger: CATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CCA 72 bp | GATACCATCATTACTACAAGCCATCTTTGGAAGGGGTaGCTGAGGGACTCTTGGTACATGCAGATATTTGGT | + |
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Preference number: 3 (lower is better) Translates to: DTIITTSHLWKG*LRDSWYMQIFG Trigger: ACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CCA 72 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTaGAAGGGGTGGCTGAGGGACTCTTGGTACATGCAG | + |
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Preference number: 3 (lower is better) Translates to: LLSDTIITTSHL*KGWLRDSWYMQ Trigger: CTGCATGTACCAAGAGTCCCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAAAGCTGAAGTCGCTTTaGATTTGGTTAAGCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKKLKSL*IWLSTC Trigger: GCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTT...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CCA 72 bp | ATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTGTaGCACCTCAGGCAAAGTCCCACTATTATTAATAAA | + |
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Preference number: 3 (lower is better) Translates to: IWLSTCTGLFFL*HLRQSPTIINK Trigger: TTTATTAATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGTTTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGCGATCGCCACCGAGATaGCCAGCACGCGGCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TEFWGVQCRPRWSVSLWLRSPPR*PARGPG Trigger: GCCGGGGCCGCGTGCTGGGCATCTCGGTGGCGATCG...CAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAAACTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGTTTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGGGCTCAGCGCGGCGGTaGAGCTGGTCAGGCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: TEFWGVQCRPRWSVSLWLGSARR*SWSGTA Trigger: TGCAGTGCCTGACCAGCTCCACCGCCGCGCTGAGCC...CAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAAACTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGTTTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGCCAGAAAAGACCCCGTaGGCGATCGCCACCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: TEFWGVQCRPRWSVSLWLPEKTP*AIATEM Trigger: CATCTCGGTGGCGATCGCGCACGGGGTCTTTTCTGG...CAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAAACTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTCCGTTACGTACCCAATaGGGTCGCCCGTCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPPLRTQ*GRPSGR Trigger: GCGACCTGACGGGCGACCCCATTGGGTACGTAACGG...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | ACCTGCACAGGTCTCTTCTTTCTGTGGCACCTCAGGCAAAGTCCCACTATTATTCTGCACGGAGTCACCTaGCCCCTCCGCACTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TCTGLFFLWHLRQSPTIILHGVT*PLRTLW Trigger: CCAGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAG...AATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTGACTCTTGCCCACCTTaGTGCACGGAGTCACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPDSCPP*CTESPA Trigger: GGCAGGTGACTCCGTGCAGCAAGGTGGGCAAGAGTC...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | TTTGGGGTGTGCAGTGCAGACCAAGGTGGTCTGTTTCCCTCTGGCTGTTTTACAAGGTCCAGGCGTGGATaGAGTCGGTGCTGGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: FGVCSADQGGLFPSGCFTRSRRG*SRCWRK Trigger: CTTTCGCCAGCACCGACTCCATCCACGCCTGGACCT...TGTAAAACAGCCAGAGGGAAACAGACCACCTTGGTCTGCACTGCACACCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTCAGCACCAGGTAGGCTaGGTGCACCAATACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPQHQVG*VHQYSQ Trigger: CTGGCTGTATTGGTGCACGCAGCCTACCTGGTGCTG...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | GGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGACGCGCGGCGGTGGAGCTaGTCAGGCACTGCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GWLRDSWYMQIFGYDYKDARRWS*SGTAPG Trigger: CCCTGGTGCAGTGCCTGACCAGCTCCACCGCCGCGC...GTCTTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | GGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGACCGTACATGGGCAGGCTaGGGCCGCGCAGCGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: GWLRDSWYMQIFGYDYKDRTWAG*GRAATR Trigger: TCTGGTCGCTGCGCGGCCTCAGCCTGCCCATGTACG...GTCTTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTCCACAACGCCAGCAATaGATAGAGAGGTGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPPQRQQ*IERWAP Trigger: TGGAGCCCACCTCTCTATTCATTGCTGGCGTTGTGG...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | CACCTGCACAGGTCTCTTCTTTCTGTGGCACCTCAGGCAAAGTCCCACTATTATTCTGATGCTGCCCCTTaGCTCTTGCCCACCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLHRSLLSVAPQAKSHYYSDAAP*LLPTLL Trigger: CAGCAAGGTGGGCAAGAGTCAAGGGGCAGCATCAGA...ATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | ACCTGCACAGGTCTCTTCTTTCTGTGGCACCTCAGGCAAAGTCCCACTATTATTCGGGTCCTTCCAGCCTaGAAAGGTCCAGGCGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TCTGLFFLWHLRQSPTIIRVLPA*KGPGVD Trigger: ATCCACGCCTGGACCTTTCCAGGCTGGAAGGACCCG...AATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | ACCTGCACAGGTCTCTTCTTTCTGTGGCACCTCAGGCAAAGTCCCACTATTATTCAACTGGTCCCCACTTaGCTGTCGCTCCTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TCTGLFFLWHLRQSPTIIQLVPT*LSLLSL Trigger: GAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTG...AATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTGCAGCGACCAGAGAGTaGGACTGGACTGCAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSAATRE*DWTAAW Trigger: CCACGCTGCAGTCCAGTCTCACTCTCTGGTCGCTGC...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTTACAGTGCAGTGTGGTaGAGTTCATGGCACAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPYSAVW*SSWHSR Trigger: TCGGCTGTGCCATGAACTTCACCACACTGCACTGTA...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAATGGGCTCCACGTCGCTaGACGCCACCATGCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKWAPRR*TPPCPP Trigger: CGGTGGGCATGGTGGCGTTCAGCGACGTGGAGCCCA...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTGGAAGGGGTGGCTGAGGGGAAAGGTCCAGGCGTaGATGGAGTCGGTGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLSDTIITTSHLWKGWLRGKVQA*MESVLA Trigger: CGCCAGCACCGACTCCATCCACGCCTGGACCTTTCC...CCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | CTAATTTGTCTCTGTCGGTCCCTTTCAGCTCTTGCATCTCTAACCCCCACCCCTATAACGAAAGGCAACTaGTCCCCACTTGGCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LICLCRSLSALASLTPTPITKGN*SPLGCR Trigger: GCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTTAT...AGGGGTGGGGGTTAGAGATGCAAGAGCTGAAAGGGACCGACAGAGACAAATTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTGGCGATCACATACTGTaGGGTGAGAGGCCCGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSGDHIL*GERPVL Trigger: GAGCACGGGCCTCTCACCGCACAGTATGTGATCGCC...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTCTGCCCCTTGACTCTTaGCCACCTTGCTGCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSLPLDS*PPCCTE Trigger: CTCCGTGCAGCAAGGTGGGCAAGAGTCAAGGGGCAG...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGACTGGACTGCAGCGTaGAGAGCACGGCAACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKDWTAA*RARQPQ Trigger: CTGGGGTTGCCGTGCTCTCCACGCTGCAGTCCAGTC...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAATCACATACTGTGCGGTaGGAGGCCCGTGCTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKSHTVR*EARAPC Trigger: ACACGGAGCACGGGCCTCTCACCGCACAGTATGTGA...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGAGCTGGTCAGGCACTaGACCAGGGTCAGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKELVRH*TRVRKE Trigger: CTCCTTCCTGACCCTGGTGCAGTGCCTGACCAGCTC...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTTCGCTCCTCTCCCTCTaGCTGCGATTCCAGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSSLLSL*LRFQIF Trigger: GAAGATCTGGAATCGCAGGCAGAGGGAGAGGAGCGA...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTGGAAGGGGTGGCTGAGGCGAATATGGAAACCATaGCCGGGTCCTTCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLSDTIITTSHLWKGWLRRIWKP*PGPSSL Trigger: CAGGCTGGAAGGACCCGGCCATGGTTTCCATATTCG...CCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAAGAGTGAGACTGGACTaGAGCGTGGAGAGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKRVRLD*SVESTA Trigger: TGCCGTGCTCTCCACGCTGCAGTCCAGTCTCACTCT...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | GACTTCATAATCAAAGCTAGGAACCCATGTCTTCAAAATAGCTTCAACATTTCCGGGGCAGGCAGCGCTTaGAGACTACGTACATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DFIIKARNPCLQNSFNISGAGSA*RLRTWA Trigger: TGCCCATGTACGTAGTCTTCAAGCGCTGCCTGCCCC...GGAAATGTTGAAGCTATTTTGAAGACATGGGTTCCTAGCTTTGATTATGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | TTACTAAGTGATACCATCATTACTACAAGCCATCTTTGGAAGGGGTGGCTGAGGTGGTCACAGCAGAGTTaGTGTAGGTACAGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLSDTIITTSHLWKGWLRWSQQS*CRYSAV Trigger: CACTGCACTGTACCTACATCAACTCTGCTGTGACCA...CCTCAGCCACCCCTTCCAAAGATGGCTTGTAGTAATGATGGTATCACTTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR TCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTTGGCCACACAATAAATaGTGGAGCCCAGGGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSWPHNK*WSPGCS Trigger: TGAACACCCTGGGCTCCATCATTTATTGTGTGGCCA...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTCCCACCTCATCAGAATaGCCTTCTGCTCTTGAACTC | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSPTSSE*PSALEL Trigger: GAGTTCAAGAGCAGAAGGGCATTCTGATGAGGTGGG...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| 3UTR CAA 72 bp | AATGTCCAGGAGTCTGAAGCTGAAGTCGCTTTTGATTaGGTTAAGCACCTGCACAGGTCTCTTCTTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NVQESEAEVAFD*VKHLHRSLLSV Trigger: CACAGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTCAGACTCCTGGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTGAAGTCGCTTTTGATTTGGTTAAGCACCTGCACAGGTCTCTTCTTTCTCCAGATCTTCATAGTTaGTTTGCCTTCTGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EAEVAFDLVKHLHRSLLSPDLHS*FAFWSP Trigger: TGGAGACCAGAAGGCAAAGCAACTATGAAGATCTGG...AGAAAGAAGAGACCTGTGCAGGTGCTTAACCAAATCAAAAGCGACTTCAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CCA 90 bp | GACTTCATAATCAAAGCTAGGAACCCATGTCTTCAAAATAGCTTCAACATTTCCTACAGGCCACGAATATaGAAACCATGGCCGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DFIIKARNPCLQNSFNISYRPRI*KPWPGP Trigger: AGGACCCGGCCATGGTTTCCATATTCGTGGCCTGTA...GGAAATGTTGAAGCTATTTTGAAGACATGGGTTCCTAGCTTTGATTATGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | AGGCTGCGTGCACCAATACAGCCAGCACGCCCGTTACGTACCCAATaGGGTCGCCCGTCAGGTCGCCAGCTCCTGCCAGGGCGGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RLRAPIQPARPLRTQ*GRPSGRQLLPGRRR Trigger: GCGGCGCCGCCCTGGCAGGAGCTGGCGACCTGACGGGCGACCCCATTGGGTACGTAACGGGCGTGCTGGCTGTATTGGTGCACGCAGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | ATGGGCAGGCTGAGGCCGCGCAGCGACCAGAGAGTGAGACTGGACTaGAGCGTGGAGAGCACGGCAACCCCAGCGAAGGAGCGAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: MGRLRPRSDQRVRLD*SVESTATPAKERAR Trigger: CCTAGCTCGCTCCTTCGCTGGGGTTGCCGTGCTCTCCACGCTGCAGTCCAGTCTCACTCTCTGGTCGCTGCGCGGCCTCAGCCTGCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | GCAGATGACCAGCAGAGGGGTGGCGGAGACGGCGATCACATACTGTaGGGTGAGAGGCCCGTGCTCCGTGTCCGCGCTCGCCTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ADDQQRGGGDGDHIL*GERPVLRVRARLLD Trigger: ATCCAGAAGGCGAGCGCGGACACGGAGCACGGGCCTCTCACCGCACAGTATGTGATCGCCGTCTCCGCCACCCCTCTGCTGGTCATCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | GTGCTCCGTGTCCGCGCTCGCCTTCTGGATCAGCACCAGGTAGGCTaGGTGCACCAATACAGCCAGCACGCCCGTTACGTACCCAATGGG | + |
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Preference number: 5 (lower is better) Translates to: VLRVRARLLDQHQVG*VHQYSQHARYVPNG Trigger: CCCATTGGGTACGTAACGGGCGTGCTGGCTGTATTGGTGCACGCAGCCTACCTGGTGCTGATCCAGAAGGCGAGCGCGGACACGGAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS TCA 90 bp | GAAAGGTCCAGGCGTGGATGGAGTCGGTGCTGGCGAAAGAGCAGATaGCCAGCAGAGGGGTGGCGGAGACGGCGATCACATACTGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: ERSRRGWSRCWRKSR*PAEGWRRRRSHTVR Trigger: CCGCACAGTATGTGATCGCCGTCTCCGCCACCCCTCTGCTGGTCATCTGCTCTTTCGCCAGCACCGACTCCATCCACGCCTGGACCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | GCCAGTGAAATCCCTCTGATGCTGCCCCTTGACTCTTGCCCACCTTaGTGCACGGAGTCACCTGCCCCCTCCGCACTCTCTGGCTCGCTA | + |
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Preference number: 5 (lower is better) Translates to: ASEIPLMLPLDSCPP*CTESPAPSALSGSL Trigger: TAGCGAGCCAGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAGCAAGGTGGGCAAGAGTCAAGGGGCAGCATCAGAGGGATTTCACTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | TTGCCCACCTTGCTGCACGGAGTCACCTGCCCCCTCCGCACTCTCTaGCTCGCTATTTCCGCTCTTGGCGGGCAGCTCCTCCATAACGAA | + |
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Preference number: 5 (lower is better) Translates to: LPTLLHGVTCPLRTL*LAISALGGQLLHNE Trigger: TTCGTTATGGAGGAGCTGCCCGCCAAGAGCGGAAATAGCGAGCCAGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAGCAAGGTGGGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | ATGGAAACCATGGCCGGGTCCTTCCAGCCTGGAAAGGTCCAGGCGTaGATGGAGTCGGTGCTGGCGAAAGAGCAGATGACCAGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: METMAGSFQPGKVQA*MESVLAKEQMTSRG Trigger: CCCTCTGCTGGTCATCTGCTCTTTCGCCAGCACCGACTCCATCCACGCCTGGACCTTTCCAGGCTGGAAGGACCCGGCCATGGTTTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | CTATTTCCGCTCTTGGCGGGCAGCTCCTCCATAACGAAAGGCAACTaGTCCCCACTTGGCTGTCGCTCCTCTCCCTCTGCCTGCGATTCC | + |
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Preference number: 5 (lower is better) Translates to: LFPLLAGSSSITKGN*SPLGCRSSPSACDS Trigger: GGAATCGCAGGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTTATGGAGGAGCTGCCCGCCAAGAGCGGAAATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | AGTGAAATCCCTCTGATGCTGCCCCTTGACTCTTGCCCACCTTGCTaGACGGAGTCACCTGCCCCCTCCGCACTCTCTGGCTCGCTATTT | + |
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Preference number: 5 (lower is better) Translates to: SEIPLMLPLDSCPPC*TESPAPSALSGSLF Trigger: AAATAGCGAGCCAGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAGCAAGGTGGGCAAGAGTCAAGGGGCAGCATCAGAGGGATTTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | TCATGGCACAGCCGATCAGGATACAGGCCACGAATATGGAAACCATaGCCGGGTCCTTCCAGCCTGGAAAGGTCCAGGCGTGGATGGAGT | + |
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Preference number: 5 (lower is better) Translates to: SWHSRSGYRPRIWKP*PGPSSLERSRRGWS Trigger: ACTCCATCCACGCCTGGACCTTTCCAGGCTGGAAGGACCCGGCCATGGTTTCCATATTCGTGGCCTGTATCCTGATCGGCTGTGCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 90 bp | CTTGGCGGGCAGCTCCTCCATAACGAAAGGCAACTGGTCCCCACTTaGCTGTCGCTCCTCTCCCTCTGCCTGCGATTCCAGATCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: LGGQLLHNERQLVPT*LSLLSLCLRFQIFI Trigger: TATGAAGATCTGGAATCGCAGGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTTATGGAGGAGCTGCCCGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 90 bp | AACGAAAGGCAACTGGTCCCCACTTGGCTGTCGCTCCTCTCCCTCTaGCTGCGATTCCAGATCTTCATAGTTGCTTTGCCTTCTGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: NERQLVPTWLSLLSL*LRFQIFIVALPSGL Trigger: GAGACCAGAAGGCAAAGCAACTATGAAGATCTGGAATCGCAGGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CAA 90 bp | CACCTGCACAGGTCTCTTCTTTCTGTGGCACCTCAGGCAAAGTCCCACTATTATAACTTGAGCAGGATGTaGAGGGAGCCAGAAAAGACC | + |
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Preference number: 5 (lower is better) Translates to: HLHRSLLSVAPQAKSHYYNLSRM*REPEKT Trigger: GGTCTTTTCTGGCTCCCTCAACATCCTGCTCAAGTT...ATAATAGTGGGACTTTGCCTGAGGTGCCACAGAAAGAAGAGACCTGTGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CAA 90 bp | GGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGACAGGGGCAGGCAGCGCTaGAAGACTACGTACATGGGC | + |
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Preference number: 5 (lower is better) Translates to: GWLRDSWYMQIFGYDYKDRGRQR*KTTYMG Trigger: GCCCATGTACGTAGTCTTCAAGCGCTGCCTGCCCCT...GTCTTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CAA 90 bp | AAGGGGTGGCTGAGGGACTCTTGGTACATGCAGATATTTGGTTATGATTATAAAGCAACTGGTCCCCACTaGGCTGTCGCTCCTCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: KGWLRDSWYMQIFGYDYKATGPH*AVAPLP Trigger: AGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGC...TTTATAATCATAACCAAATATCTGCATGTACCAAGAGTCCCTCAGCCACCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS-3UTR CAA 90 bp | GACTTCATAATCAAAGCTAGGAACCCATGTCTTCAAAATAGCTTCAACATTTCCGAGGGCGCGCCGTTCTaGAGCACCAGCACACCGATG | + |
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Preference number: 5 (lower is better) Translates to: DFIIKARNPCLQNSFNISEGAPF*STSTPM Trigger: CATCGGTGTGCTGGTGCTCAAGAACGGCGCGCCCTC...GGAAATGTTGAAGCTATTTTGAAGACATGGGTTCCTAGCTTTGATTATGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | CAGCAGAGGGGTGGCGGAGACGGCGATCACATACTGTaGGGTGAGAGGCCCGTGCTCCGTGTCCGCGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: QQRGGGDGDHIL*GERPVLRVRAR Trigger: GCGAGCGCGGACACGGAGCACGGGCCTCTCACCGCACAGTATGTGATCGCCGTCTCCGCCACCCCTCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS TCA 72 bp | GAGGGGTGGCGGAGACGGCGATCACATACTGTGCGGTaGGAGGCCCGTGCTCCGTGTCCGCGCTCGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: EGWRRRRSHTVR*EARAPCPRSPS Trigger: AGAAGGCGAGCGCGGACACGGAGCACGGGCCTCTCACCGCACAGTATGTGATCGCCGTCTCCGCCACCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | CTGAGGCCGCGCAGCGACCAGAGAGTGAGACTGGACTaGAGCGTGGAGAGCACGGCAACCCCAGCGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRPRSDQRVRLD*SVESTATPAKE Trigger: CTCCTTCGCTGGGGTTGCCGTGCTCTCCACGCTGCAGTCCAGTCTCACTCTCTGGTCGCTGCGCGGCCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | GCACCAATACAGCCAGCACGCCCGTTACGTACCCAATaGGGTCGCCCGTCAGGTCGCCAGCTCCTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: APIQPARPLRTQ*GRPSGRQLLPG Trigger: CCCTGGCAGGAGCTGGCGACCTGACGGGCGACCCCATTGGGTACGTAACGGGCGTGCTGGCTGTATTGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | TTGAGCAGGATGTTGAGGGAGCCAGAAAAGACCCCGTaGGCGATCGCCACCGAGATGCCCAGCACGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSRMLREPEKTP*AIATEMPSTRP Trigger: GGGCCGCGTGCTGGGCATCTCGGTGGCGATCGCGCACGGGGTCTTTTCTGGCTCCCTCAACATCCTGCTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | TTGCTGCACGGAGTCACCTGCCCCCTCCGCACTCTCTaGCTCGCTATTTCCGCTCTTGGCGGGCAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHGVTCPLRTL*LAISALGGQLL Trigger: GAGGAGCTGCCCGCCAAGAGCGGAAATAGCGAGCCAGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAGCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CAA 90 bp | AGCACCAGCACACCGATGAGCATGGTGACTAGGGGCAGGCAGCGCTaGAAGACTACGTACATGGGCAGGCTGAGGCCGCGCAGCGACCAG | + |
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Preference number: 6 (lower is better) Translates to: STSTPMSMVTRGRQR*KTTYMGRLRPRSDQ Trigger: CTGGTCGCTGCGCGGCCTCAGCCTGCCCATGTACGTAGTCTTCAAGCGCTGCCTGCCCCTAGTCACCATGCTCATCGGTGTGCTGGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS TCA 72 bp | AGGCGTGGATGGAGTCGGTGCTGGCGAAAGAGCAGATaGCCAGCAGAGGGGTGGCGGAGACGGCGATCACAT | + |
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Preference number: 6 (lower is better) Translates to: RRGWSRCWRKSR*PAEGWRRRRSH Trigger: ATGTGATCGCCGTCTCCGCCACCCCTCTGCTGGTCATCTGCTCTTTCGCCAGCACCGACTCCATCCACGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | GTCCGCGCTCGCCTTCTGGATCAGCACCAGGTAGGCTaGGTGCACCAATACAGCCAGCACGCCCGTTACGTA | + |
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Preference number: 6 (lower is better) Translates to: VRARLLDQHQVG*VHQYSQHARYV Trigger: TACGTAACGGGCGTGCTGGCTGTATTGGTGCACGCAGCCTACCTGGTGCTGATCCAGAAGGCGAGCGCGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | ATCCCTCTGATGCTGCCCCTTGACTCTTGCCCACCTTaGTGCACGGAGTCACCTGCCCCCTCCGCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IPLMLPLDSCPP*CTESPAPSALS Trigger: AGAGAGTGCGGAGGGGGCAGGTGACTCCGTGCAGCAAGGTGGGCAAGAGTCAAGGGGCAGCATCAGAGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | GCCAGTGAAATCCCTCTGATGCTGCCCCTTGACTCTTaGCCACCTTGCTGCACGGAGTCACCTGCCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASEIPLMLPLDS*PPCCTESPAPS Trigger: GGAGGGGGCAGGTGACTCCGTGCAGCAAGGTGGGCAAGAGTCAAGGGGCAGCATCAGAGGGATTTCACTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | ATGGCCGGGTCCTTCCAGCCTGGAAAGGTCCAGGCGTaGATGGAGTCGGTGCTGGCGAAAGAGCAGATGACC | + |
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Preference number: 6 (lower is better) Translates to: MAGSFQPGKVQA*MESVLAKEQMT Trigger: GGTCATCTGCTCTTTCGCCAGCACCGACTCCATCCACGCCTGGACCTTTCCAGGCTGGAAGGACCCGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | CTCTTGGCGGGCAGCTCCTCCATAACGAAAGGCAACTaGTCCCCACTTGGCTGTCGCTCCTCTCCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LLAGSSSITKGN*SPLGCRSSPSA Trigger: GGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTTATGGAGGAGCTGCCCGCCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CAA 72 bp | GCCCCCTCCGCACTCTCTGGCTCGCTATTTCCGCTCTaGGCGGGCAGCTCCTCCATAACGAAAGGCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: APSALSGSLFPL*AGSSSITKGNW Trigger: CCAGTTGCCTTTCGTTATGGAGGAGCTGCCCGCCAAGAGCGGAAATAGCGAGCCAGAGAGTGCGGAGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CAA 90 bp | GAGTCACCTGCCCCCTCCGCACTCTCTGGCTCGCTATTTCCGCTCTaGGCGGGCAGCTCCTCCATAACGAAAGGCAACTGGTCCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ESPAPSALSGSLFPL*AGSSSITKGNWSPL Trigger: AAGTGGGGACCAGTTGCCTTTCGTTATGGAGGAGCTGCCCGCCAAGAGCGGAAATAGCGAGCCAGAGAGTGCGGAGGGGGCAGGTGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | CAGCTCCTCCATAACGAAAGGCAACTGGTCCCCACTTaGCTGTCGCTCCTCTCCCTCTGCCTGCGATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLLHNERQLVPT*LSLLSLCLRFQ Trigger: CTGGAATCGCAGGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTGCCTTTCGTTATGGAGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | AGCCGATCAGGATACAGGCCACGAATATGGAAACCATaGCCGGGTCCTTCCAGCCTGGAAAGGTCCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SRSGYRPRIWKP*PGPSSLERSRR Trigger: ACGCCTGGACCTTTCCAGGCTGGAAGGACCCGGCCATGGTTTCCATATTCGTGGCCTGTATCCTGATCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS CCA 72 bp | TCATGGCACAGCCGATCAGGATACAGGCCACGAATATaGAAACCATGGCCGGGTCCTTCCAGCCTGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SWHSRSGYRPRI*KPWPGPSSLER Trigger: CCTTTCCAGGCTGGAAGGACCCGGCCATGGTTTCCATATTCGTGGCCTGTATCCTGATCGGCTGTGCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | CAACTGGTCCCCACTTGGCTGTCGCTCCTCTCCCTCTaGCTGCGATTCCAGATCTTCATAGTTGCTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QLVPTWLSLLSL*LRFQIFIVALP Trigger: AGGCAAAGCAACTATGAAGATCTGGAATCGCAGGCAGAGGGAGAGGAGCGACAGCCAAGTGGGGACCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | GTGTCCTTTAAGGACCTCCTTCCCACCTCATCAGAATaGCCTTCTGCTCTTGAACTCCTAGCCGCCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VSFKDLLPTSSE*PSALELLAASE Trigger: TTCACTGGCGGCTAGGAGTTCAAGAGCAGAAGGGCATTCTGATGAGGTGGGAAGGAGGTCCTTAAAGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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| CDS GCA 72 bp | CCTCTCCCTCTGCCTGCGATTCCAGATCTTCATAGTTaGTTTGCCTTCTGGTCTCCAAGAATTTGGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PLPLPAIPDLHS*FAFWSPRIWPH Trigger: GTGTGGCCAAATTCTTGGAGACCAGAAGGCAAAGCAACTATGAAGATCTGGAATCGCAGGCAGAGGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059805.6 |
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