Pregenerated sensors for SLC35D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033114Ensembl transcript IDs: ENSMUST00000099441.6, ENSMUST00000220792.2, ENSMUST00000222168.2, ENSMUST00000222794.2, ENSMUST00000222866.2, ENSMUST00000223461.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTATTTCGAAGACATTCCTTTTTGTGCTCTGACCAAGCAGGTGACTaGCCCATGTGTGGGACCTCTGGTCTACCCACTCCTGCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VFRRHSFLCSDQAGD*PMCGTSGLPTPAEA Trigger: AGCCTCAGCAGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR GCA 90 bp | TTTGAAACCTCAGAGCCCACCCCAGGGACACATTTCCTCCAGCAATaGCACCCAACCAGGGACCACACATTCAAATGTCTAAGACTACGG | + |
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Preference number: 1 (lower is better) Translates to: FETSEPTPGTHFLQQ*HPTRDHTFKCLRLR Trigger: CCGTAGTCTTAGACATTTGAATGTGTGGTCCCTGGTTGGGTGGCATTGCTGGAGGAAATGTGTCCCTGGGGTGGGCTCTGAGGTTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR GCA 90 bp | ACGTGTGAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTaGTCTGACCAAGCAGGTGACTGCCCCATGTGTGGGACCTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: TCEVAFFVFRRHSFL*SDQAGDCPMCGTSG Trigger: ACCAGAGGTCCCACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR GCA 90 bp | TACAAAAATGTAGCCTTCCAAGTTGAATGTGAGGTCAGAGCCAGCTaGTATGAACGCCCCAAGAACGATGGCCAAGACGCTGAGGATGAT | + |
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Preference number: 1 (lower is better) Translates to: YKNVAFQVECEVRAS*YERPKNDGQDAEDD Trigger: ATCATCCTCAGCGTCTTGGCCATCGTTCTTGGGGCGTTCATAGCAGCTGGCTCTGACCTCACATTCAACTTGGAAGGCTACATTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR GCA 90 bp | TCCATCCTATTCTTTGAGACAGTGTCTCTCACTGAACCTGATGCTTaGCATTTAAGACTGGCTGGCAAGCCAGAGTCTCAGGACATGTCT | + |
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Preference number: 1 (lower is better) Translates to: SILFFETVSLTEPDA*HLRLAGKPESQDMS Trigger: AGACATGTCCTGAGACTCTGGCTTGCCAGCCAGTCTTAAATGGCAAGCATCAGGTTCAGTGAGAGACACTGTCTCAAAGAATAGGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CCA 90 bp | CACATAGTGAGGGCCCTGTGGATGACTTTAGCAAATTCACTTAGTTaGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTG | + |
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Preference number: 1 (lower is better) Translates to: HIVRALWMTLANSLS*KVLYCESWVPRGSL Trigger: CAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCAACTAAGTGAATTTGCTAAAGTCATCCACAGGGCCCTCACTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR CCA 90 bp | AGCTCGTCAAACCACAAACAAGAAACTGAGCAAGCAAACCTGAAATaGATGGAGACTTTGAAACCTCAGAGCCCACCCCAGGGACACATT | + |
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Preference number: 1 (lower is better) Translates to: SSSNHKQETEQANLK*METLKPQSPPQGHI Trigger: AATGTGTCCCTGGGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGTTTCTTGTTTGTGGTTTGACGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR TCA 90 bp | TACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACGTGTaGGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: YCESWVPRGSLCSDV*GSFLCISKTFLFVL Trigger: GAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACACGTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR TCA 90 bp | AACCGATACATTCTTGATCGCTCCAACCACCGCTGTGGTCAGAGCTaGGTTGTAATAACTGCAAAGAGCTGTGGAGTACATCAGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: NRYILDRSNHRCGQS*VVITAKSCGVHQEK Trigger: TTTCTCCTGATGTACTCCACAGCTCTTTGCAGTTATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAGCGATCAAGAATGTATCGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR TCA 90 bp | CACCCAACCAGGGACCACACATTCAAATGTCTAAGACTACGGAGATaGACTGATGGCTTTGGGTTTTTGCAAAGTTTTTCCAACACTTGT | + |
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Preference number: 1 (lower is better) Translates to: HPTRDHTFKCLRLRR*TDGFGFLQSFSNTC Trigger: ACAAGTGTTGGAAAAACTTTGCAAAAACCCAAAGCCATCAGTTCATCTCCGTAGTCTTAGACATTTGAATGTGTGGTCCCTGGTTGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CCA 90 bp | AGTGGCCTGCTGAAAGTCTCCAGTAGAGACGCTAATAATGACAGTTaGGATGAGCATGAAGCAGGCATTATAGAAAAGCACTCCATATTT | + |
|
Preference number: 1 (lower is better) Translates to: SGLLKVSSRDANNDS*DEHEAGIIEKHSIF Trigger: AAATATGGAGTGCTTTTCTATAATGCCTGCTTCATGCTCATCCCAACTGTCATTATTAGCGTCTCTACTGGAGACTTTCAGCAGGCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR TCA 90 bp | ATGATAAATAAGACATTCTTCCAGTGTCTGAATTCAGTGGCCTGCTaGAAGTCTCCAGTAGAGACGCTAATAATGACAGTTGGGATGAGC | + |
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Preference number: 1 (lower is better) Translates to: MINKTFFQCLNSVAC*KSPVETLIMTVGMS Trigger: GCTCATCCCAACTGTCATTATTAGCGTCTCTACTGGAGACTTTCAGCAGGCCACTGAATTCAGACACTGGAAGAATGTCTTATTTATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTGAGGTCAGAGCCAGCTGCTATGAACGCCCCAAGAACGATGGCCAAGACGTCAGATCCAGAGGGATaGTTTCTTCATCCACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NVRSEPAAMNAPRTMAKTSDPEG*FLHPQV Trigger: AACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGA...CGTCTTGGCCATCGTTCTTGGGGCGTTCATAGCAGCTGGCTCTGACCTCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACCATTCTTCCAGTGTCTaGATTCAGTGGCCTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: WKVLYCESWVPRGSLCSDHSSSV*IQWPAE Trigger: TTCAGCAGGCCACTGAATTCAGACACTGGAAGAATG...GTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCTTCGGGTCCATTTTCTGTTTGGTATAAACTCCATTTGCCGCGGTGAAAAAGGGCCAGTGCACTaGGCACCTATTGTCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: QLLRVHFLFGINSICRGEKGPVH*APIVLT Trigger: TGTGAGGACAATAGGTGCCCAGTGCACTGGCCCTTT...TTCACCGCGGCAAATGGAGTTTATACCAAACAGAAAATGGACCCGAAGGAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR CAA 90 bp | GTGACGTGTGAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTaGTGCTCTGACCAAGCAGGTGACTGCCCCATGTGTGGGACCTCT | + |
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Preference number: 2 (lower is better) Translates to: VTCEVAFFVFRRHSF*CSDQAGDCPMCGTS Trigger: AGAGGTCCCACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACACGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR CAA 90 bp | AGGGCCCTGTGGATGACTTTAGCAAATTCACTTAGTTGGAAGGTTTaGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: RALWMTLANSLSWKV*YCESWVPRGSLCSD Trigger: GTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCAACTAAGTGAATTTGCTAAAGTCATCCACAGGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAATGGAATCGTAAACTTCCTGAGCACGGTGAACATCGGCAAGCTTAATTTATCTACCCACTCCTGCTaGGGCTGCTCTTTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VNGIVNFLSTVNIGKLNLSTHSC*GCSFQP Trigger: AGGCTGGAAAGAGCAGCCTCAGCAGGAGTGGGTAGA...TAAATTAAGCTTGCCGATGTTCACCGTGCTCAGGAAGTTTACGATTCCATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACGTGTACTACGGAGATGAACTaGTGGCTTTGGGTTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: RFCTVSRGFLVAHCAVTCTTEMN*WLWVFA Trigger: TGCAAAAACCCAAAGCCATCAGTTCATCTCCGTAGT...ACACGTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCACAGTGCTGATAAGCAAAGTCACCCTTGAAACATCTTCCCCAGCACATTCAAAGCTTCAAAGATaGAAGGGCCAGTGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KATVLISKVTLETSSPAHSKLQR*KGQCTG Trigger: CCCAGTGCACTGGCCCTTTCATCTTTGAAGCTTTGA...ATGTGCTGGGGAAGATGTTTCAAGGGTGACTTTGCTTATCAGCACTGTGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCAAGCCAGAGTCTCAGGACATGTCTGTCTCTGCTACCCAAAGCTGAGATGTAATATCACACTGTaGGGCATATATAGACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GWQARVSGHVCLCYPKLRCNITL*GIYRQD Trigger: GTCCTGTCTATATATGCCGCACAGTGTGATATTACA...TCTCAGCTTTGGGTAGCAGAGACAGACATGTCCTGAGACTCTGGCTTGCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CAA 90 bp | CACAAACAAGAAACTGAGCAAGCAAACCTGAAATGGATGGAGACTTaGAAACCTCAGAGCCCACCCCAGGGACACATTTCCTCCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: HKQETEQANLKWMET*KPQSPPQGHISSSN Trigger: ATTGCTGGAGGAAATGTGTCCCTGGGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGTTTCTTGTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTGCTCTGACCAAGCAGGTTCTACCCACTCCTGCTaGGGCTGCTCTTTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VAFFVFRRHSFLCSDQAGSTHSC*GCSFQP Trigger: AGGCTGGAAAGAGCAGCCTCAGCAGGAGTGGGTAGA...ACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCAGGAGTAAAGTGAATGGAATCGTAAACTTCCTGAGCACGGTGAACATCTCCAAGTACAATTGGTaGGGGAAAACCCTAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ASRSKVNGIVNFLSTVNISKYNW*GKTLVW Trigger: CCAGACTAGGGTTTTCCCTCACCAATTGTACTTGGA...GATGTTCACCGTGCTCAGGAAGTTTACGATTCCATTCACTTTACTCCTGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACATAGTGAGGGCCCTGTaGATGACTTTAGCAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: WKVLYCESWVPRGSLCSDIVRAL*MTLANS Trigger: TGAATTTGCTAAAGTCATCCACAGGGCCCTCACTAT...GTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATCAGTGTGGCAGGAACAGCTGAGAGCTCGTCAAACCACAAACAAGAAACTGTGTGCATGTGTATGTaGAGACCGGAGGCTAATGAT | + |
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Preference number: 2 (lower is better) Translates to: EISVAGTAESSSNHKQETVCMCM*RPEAND Trigger: ATCATTAGCCTCCGGTCTCCACATACACATGCACAC...AGTTTCTTGTTTGTGGTTTGACGAGCTCTCAGCTGTTCCTGCCACACTGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCAGGAGTAAAGTGAATGGAATCGTAAACTTCCTGAGCACGGTGAACATCTCAGATCCAGAGGGATaGTTTCTTCATCCACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ASRSKVNGIVNFLSTVNISDPEG*FLHPQV Trigger: AACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGA...GATGTTCACCGTGCTCAGGAAGTTTACGATTCCATTCACTTTACTCCTGGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACCTGAGTTGTAATAACTaGAAAGAGCTGTGGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: WKVLYCESWVPRGSLCSDLSCNN*KELWST Trigger: TGTACTCCACAGCTCTTTGCAGTTATTACAACTCAG...GTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGAAACATCTTCCCCAGCACATAGTGAGGGCCCTGTGGATGACTTTAGCAATGGCTTTGGGTTTTTaGAAAGTTTTTCCAACACTT | + |
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Preference number: 2 (lower is better) Translates to: PLKHLPQHIVRALWMTLAMALGF*KVFPTL Trigger: AAGTGTTGGAAAAACTTTGCAAAAACCCAAAGCCAT...TGCTAAAGTCATCCACAGGGCCCTCACTATGTGCTGGGGAAGATGTTTCAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR GCA 90 bp | TTCAGATCCAGAGGGATGCTTTCTTCATCCACAGGTTGTTTAGGTTTCAACTGGGGTATAAACTCCATTTaGCGCGGTGAAGATATCATT | + |
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Preference number: 2 (lower is better) Translates to: FRSRGMLSSSTGCLGFNWGINSI*RGEDII Trigger: AATGATATCTTCACCGCGGCAAATGGAGTTTATACC...CCAGTTGAAACCTAAACAACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGTAAACTTCCTGAGCACGGTGAACATCGGCAAGCTTAATTTACTTGTGCTTGGGAAAACCCTAGTCTaGAACTCAAAGCTTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: IVNFLSTVNIGKLNLLVLGKTLV*NSKLQR Trigger: TCTTTGAAGCTTTGAGTTCCAGACTAGGGTTTTCCC...AAGCACAAGTAAATTAAGCTTGCCGATGTTCACCGTGCTCAGGAAGTTTACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGATCCAGAGGGATGCTTTCTTCATCCACAGGTTGTTTAGGTTTCAACTGGGGTCCATTTTCTGTTTaGTATAAACTCCATTTGCCG | + |
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Preference number: 2 (lower is better) Translates to: FRSRGMLSSSTGCLGFNWGPFSV*YKLHLP Trigger: CGGCAAATGGAGTTTATACCAAACAGAAAATGGACC...CCAGTTGAAACCTAAACAACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR GCA 72 bp | AGACATTCCTTTTTGTGCTCTGACCAAGCAGGTGACTaGCCCATGTGTGGGACCTCTGGTCTACCCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: RHSFLCSDQAGD*PMCGTSGLPTP Trigger: AGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR GCA 72 bp | TCAGAGCCCACCCCAGGGACACATTTCCTCCAGCAATaGCACCCAACCAGGGACCACACATTCAAATGTCTA | + |
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Preference number: 3 (lower is better) Translates to: SEPTPGTHFLQQ*HPTRDHTFKCL Trigger: TAGACATTTGAATGTGTGGTCCCTGGTTGGGTGGCATTGCTGGAGGAAATGTGTCCCTGGGGTGGGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR CAA 90 bp | AATGTGAGGTCAGAGCCAGCTGCTATGAACGCCCCAAGAACGATGGCCAAGACGCGAAGACATTCCTTTTaGTGCTCTGACCAAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: NVRSEPAAMNAPRTMAKTRRHSF*CSDQAG Trigger: ACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCG...CGTCTTGGCCATCGTTCTTGGGGCGTTCATAGCAGCTGGCTCTGACCTCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR TCA 72 bp | GGGAAAACCCTAGTCTGGAACTCAAAGCTTCAAAGATaGAAGGGCCAGTGCACTGGGCACCTATTGTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GKTLVWNSKLQR*KGQCTGHLLSS Trigger: TGAGGACAATAGGTGCCCAGTGCACTGGCCCTTTCATCTTTGAAGCTTTGAGTTCCAGACTAGGGTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR GCA 72 bp | TTCTTTGAGACAGTGTCTCTCACTGAACCTGATGCTTaGCATTTAAGACTGGCTGGCAAGCCAGAGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FFETVSLTEPDA*HLRLAGKPESQ Trigger: CTGAGACTCTGGCTTGCCAGCCAGTCTTAAATGGCAAGCATCAGGTTCAGTGAGAGACACTGTCTCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCACAGTGCTGATAAGCAAAGTCACCCTTGAAACATCTTCCCCAGCACATCGAAGACATTCCTTTTaGTGCTCTGACCAAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: KATVLISKVTLETSSPAHRRHSF*CSDQAG Trigger: ACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCG...ATGTGCTGGGGAAGATGTTTCAAGGGTGACTTTGCTTATCAGCACTGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR-3UTR CAA 90 bp | TATTGTGTCCCAAGTATGATAGCCTCCAGGAGTAAAGTGAATGGAATCGTAAACTGCACTGGGCACCTATaGTCCTCACAGCAGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: YCVPSMIASRSKVNGIVNCTGHL*SSQQWP Trigger: AGGCCACTGCTGTGAGGACAATAGGTGCCCAGTGCA...GTTTACGATTCCATTCACTTTACTCCTGGAGGCTATCATACTTGGGACACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR TCA 72 bp | TCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACGTGTaGGGTAGCTTTCTTTGTATTTCGAAGACATTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SWVPRGSLCSDV*GSFLCISKTFL Trigger: AAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACACGTCACTGCACAATGAGCCACGAGGAACCCACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR TCA 72 bp | ATTCTTGATCGCTCCAACCACCGCTGTGGTCAGAGCTaGGTTGTAATAACTGCAAAGAGCTGTGGAGTACAT | + |
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Preference number: 3 (lower is better) Translates to: ILDRSNHRCGQS*VVITAKSCGVH Trigger: ATGTACTCCACAGCTCTTTGCAGTTATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAGCGATCAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| 3UTR GCA 72 bp | GTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTaGTCTGACCAAGCAGGTGACTGCCCCATGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: VAFFVFRRHSFL*SDQAGDCPMCG Trigger: CCCACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR GCA 72 bp | GATGGAGTAATGTGTGCACACATGTATGTATGTGTGTaGATGTGTATGTGGAGACCGGAGGCTAATGATGGG | + |
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Preference number: 3 (lower is better) Translates to: DGVMCAHMYVCV*MCMWRPEANDG Trigger: CCCATCATTAGCCTCCGGTCTCCACATACACATGCACACACATACATACATGTGTGCACACATTACTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CCA 72 bp | AGGGCCCTGTGGATGACTTTAGCAAATTCACTTAGTTaGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGT | + |
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Preference number: 3 (lower is better) Translates to: RALWMTLANSLS*KVLYCESWVPR Trigger: ACGAGGAACCCACGACTCACAGTACAAAACCTTCCAACTAAGTGAATTTGCTAAAGTCATCCACAGGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR CCA 72 bp | AACCACAAACAAGAAACTGAGCAAGCAAACCTGAAATaGATGGAGACTTTGAAACCTCAGAGCCCACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NHKQETEQANLK*METLKPQSPPQ Trigger: CTGGGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGTTTCTTGTTTGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CCA 72 bp | AGTTTATTTGGGCTTACAGTTCCAGAGAGATCAGTGTaGCAGGAACAGCTGAGAGCTCGTCAAACCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLFGLTVPERSV*QEQLRARQTTN Trigger: GTTTGTGGTTTGACGAGCTCTCAGCTGTTCCTGCCACACTGATCTCTCTGGAACTGTAAGCCCAAATAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTTGAAACATCTTCCCCAGCACATAGTGAGGGCCCTGTGGATGACTTTAGCAGCAAGCTTAATTTACTaGTGCTTGATAAGCCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: PLKHLPQHIVRALWMTLAASLIY*CLISHL Trigger: TAAGTGGCTTATCAAGCACAAGTAAATTAAGCTTGC...TGCTAAAGTCATCCACAGGGCCCTCACTATGTGCTGGGGAAGATGTTTCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR CCA 72 bp | AAGGCTATCTTGTTGTTCCTTCAAGATGGAGTAATGTaGGCTGGTGAGATGGCTCAGCAGTTAAGAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: KAILLFLQDGVM*AGEMAQQLRAM Trigger: CATTGCTCTTAACTGCTGAGCCATCTCACCAGCCCACATTACTCCATCTTGAAGGAACAACAAGATAGCCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CCA 72 bp | TTGAAACATCTTCCCCAGCACATAGTGAGGGCCCTGTaGATGACTTTAGCAAATTCACTTAGTTGGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LKHLPQHIVRAL*MTLANSLSWKV Trigger: AACCTTCCAACTAAGTGAATTTGCTAAAGTCATCCACAGGGCCCTCACTATGTGCTGGGGAAGATGTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTGAGAGCTCGTCAAACCACAAACAAGAAACTGAGCAAGCAAACCTGAAAAGAGATCAAACTCATTaGTCTCCTGAGTACAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TAESSSNHKQETEQANLKRDQTH*SPEYSE Trigger: CTCACTGTACTCAGGAGACAAATGAGTTTGATCTCT...TTTCAGGTTTGCTTGCTCAGTTTCTTGTTTGTGGTTTGACGAGCTCTCAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCACAGTGCTGATAAGCAAAGTCACCCTTGAAACATCTTCCCCAGCACATGATGAACTGATGGCTTaGGGTTTTTGCAAAGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KATVLISKVTLETSSPAHDELMA*GFCKVF Trigger: AAAAACTTTGCAAAAACCCAAAGCCATCAGTTCATC...ATGTGCTGGGGAAGATGTTTCAAGGGTGACTTTGCTTATCAGCACTGTGGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR-3UTR CAA 90 bp | GTCCCAAGTATGATAGCCTCCAGGAGTAAAGTGAATGGAATCGTAAACTTCCTGCAATTCCAAGTACAATaGGTGAGGGAAAACCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VPSMIASRSKVNGIVNFLQFQVQ*VRENPS Trigger: ACTAGGGTTTTCCCTCACCAATTGTACTTGGAATTG...CAGGAAGTTTACGATTCCATTCACTTTACTCCTGGAGGCTATCATACTTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223461.2 |
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| 3UTR TCA 72 bp | AGGGACCACACATTCAAATGTCTAAGACTACGGAGATaGACTGATGGCTTTGGGTTTTTGCAAAGTTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RDHTFKCLRLRR*TDGFGFLQSFS Trigger: GGAAAAACTTTGCAAAAACCCAAAGCCATCAGTTCATCTCCGTAGTCTTAGACATTTGAATGTGTGGTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| 3UTR TCA 72 bp | CCACACATTCAAATGTCTAAGACTACGGAGATGAACTaGTGGCTTTGGGTTTTTGCAAAGTTTTTCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PHIQMSKTTEMN*WLWVFAKFFQH Trigger: GTGTTGGAAAAACTTTGCAAAAACCCAAAGCCATCAGTTCATCTCCGTAGTCTTAGACATTTGAATGTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| 3UTR TCA 72 bp | TCTATACACCTCAACCCCAGGAATATTCCTGGACACTaGATAACTAACTATTTTCTATCATACTGTAATATC | + |
|
Preference number: 3 (lower is better) Translates to: SIHLNPRNIPGH*ITNYFLSYCNI Trigger: GATATTACAGTATGATAGAAAATAGTTAGTTATTCAGTGTCCAGGAATATTCCTGGGGTTGAGGTGTATAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR CCA 90 bp | GGGTTCCTCGTGGCTCATTGTGCAGTGACGTGTGAGGTAGCTTTCTTTGTATTTGCGCCGACAGCAGCCTaGCCAGGCGAGAGGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: GFLVAHCAVTCEVAFFVFAPTAA*PGERAT Trigger: CGTTGCCCTCTCGCCTGGCCAGGCTGCTGTCGGCGC...AAATACAAAGAAAGCTACCTCACACGTCACTGCACAATGAGCCACGAGGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACTGCCCCATGTGTGGGACCTCTGGTCTACCCACTCCTGCTGAGGCTGCTTCCAAGTACAATTGGTaGGGGAAAACCGTATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDCPMCGTSGLPTPAEAASKYNW*GKTVCG Trigger: ACCACATACGGTTTTCCCTCACCAATTGTACTTGGA...AGCAGCCTCAGCAGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGGTGACTGCCCCATGTGTGGGACCTCTGGTCTACCCACTCCTGCTGAGCATTCTTCCAGTGTCTaGATTCAGTGGCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGDCPMCGTSGLPTPAEHSSSV*IQWPAE Trigger: TTCAGCAGGCCACTGAATTCAGACACTGGAAGAATG...CTCAGCAGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR CCA 90 bp | TTCAGATCCAGAGGGATGCTTTCTTCATCCACAGGTTGTTTAGGTTTCAACTGGGCGCCGACAGCAGCCTaGCCAGGCGAGAGGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: FRSRGMLSSSTGCLGFNWAPTAA*PGERAT Trigger: CGTTGCCCTCTCGCCTGGCCAGGCTGCTGTCGGCGC...CCAGTTGAAACCTAAACAACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACTGCCCCATGTGTGGGACCTCTGGTCTACCCACTCCTGCTGAGGCTGCTGTTTCAACTGGCTGCTaGGTGTTAAAAAGGAATATC | + |
|
Preference number: 4 (lower is better) Translates to: GDCPMCGTSGLPTPAEAAVSTGC*VLKRNI Trigger: GATATTCCTTTTTAACACTCAGCAGCCAGTTGAAAC...AGCAGCCTCAGCAGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGGTGACTGCCCCATGTGTGGGACCTCTGGTCTACCCACTCCTGCTGAGGGTATAAACTCCATTTaGCGCGGTGAAGATATCATT | + |
|
Preference number: 4 (lower is better) Translates to: QAGDCPMCGTSGLPTPAEGINSI*RGEDII Trigger: AATGATATCTTCACCGCGGCAAATGGAGTTTATACC...CTCAGCAGGAGTGGGTAGACCAGAGGTCCCACACATGGGGCAGTCACCTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR TCA 90 bp | GGCTGGCAAGCCAGAGTCTCAGGACATGTCTGTCTCTGCTACCCAAAGCTGAGACTCCATTTGCCGCGGTaGAGATATCATTCAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GWQARVSGHVCLCYPKLRLHLPR*RYHSRI Trigger: TATTCTTGAATGATATCTTCACCGCGGCAAATGGAG...TCTCAGCTTTGGGTAGCAGAGACAGACATGTCCTGAGACTCTGGCTTGCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| 3UTR CAA 72 bp | GAAACTGAGCAAGCAAACCTGAAATGGATGGAGACTTaGAAACCTCAGAGCCCACCCCAGGGACACATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETEQANLKWMET*KPQSPPQGHIS Trigger: GGAAATGTGTCCCTGGGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR CCA 90 bp | GGGTTCCTCGTGGCTCATTGTGCAGTGACGTGTGAGGTAGCTTTCTTTGTATTTCTCCAACCACCGCTGTaGTCAGAGCTGAGTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLVAHCAVTCEVAFFVFLQPPL*SELSCN Trigger: ATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAG...AAATACAAAGAAAGCTACCTCACACGTCACTGCACAATGAGCCACGAGGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR GCA 90 bp | ACTGAGCAAGCAAACCTGAAATGGATGGAGACTTTGAAACCTCAGAGCCCACCCTCAGATCCAGAGGGATaGTTTCTTCATCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEQANLKWMETLKPQSPPSDPEG*FLHPQV Trigger: AACCTGTGGATGAAGAAAGCATCCCTCTGGATCTGA...GGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTGCTCTGACCAACAGAGCCAGCTGCTATaGACGCCCCAAGAACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CEVAFFVFRRHSFLCSDQQSQLL*TPQERW Trigger: CCATCGTTCTTGGGGCGTTCATAGCAGCTGGCTCTG...TTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGTTTTGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTGTGCAGTGACGGTCCATTTTCTGTTTaGTATAAACTCCATTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WKVLYCESWVPRGSLCSDGPFSV*YKLHLP Trigger: CGGCAAATGGAGTTTATACCAAACAGAAAATGGACC...GTCACTGCACAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| 3UTR CAA 72 bp | GAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTaGTGCTCTGACCAAGCAGGTGACTGCCCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVAFFVFRRHSF*CSDQAGDCPMC Trigger: ACACATGGGGCAGTCACCTGCTTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGCAAGCAAACCTGAAATGGATGGAGACTTTGAAACCTCAGAGCCCACCCGAGGATGATGTTCAATaGATATTGTGTCCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TEQANLKWMETLKPQSPPEDDVQ*ILCPKY Trigger: ATACTTGGGACACAATATTCATTGAACATCATCCTC...GGGTGGGCTCTGAGGTTTCAAAGTCTCCATCCATTTCAGGTTTGCTTGCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR CCA 90 bp | TGCAGAGATCAAACTCATTTGTCTCCTGAGTACAGTGAGCACTCTATACACCTCGCTAATAATGACAGTTaGGATGAGCATGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRDQTHLSPEYSEHSIHLANNDS*DEHEAG Trigger: GCCTGCTTCATGCTCATCCCAACTGTCATTATTAGC...GAGGTGTATAGAGTGCTCACTGTACTCAGGAGACAAATGAGTTTGATCTCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| 3UTR CAA 72 bp | TGGATGACTTTAGCAAATTCACTTAGTTGGAAGGTTTaGTACTGTGAGTCGTGGGTTCCTCGTGGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: WMTLANSLSWKV*YCESWVPRGSL Trigger: CAATGAGCCACGAGGAACCCACGACTCACAGTACAAAACCTTCCAACTAAGTGAATTTGCTAAAGTCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099441.6 ENSMUST00000223461.2 |
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| 3UTR CAA 72 bp | CCTGACTTTTTATATGAGTGCAGAGATCAAACTCATTaGTCTCCTGAGTACAGTGAGCACTCTATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDFLYECRDQTH*SPEYSEHSIHL Trigger: GAGGTGTATAGAGTGCTCACTGTACTCAGGAGACAAATGAGTTTGATCTCTGCACTCATATAAAAAGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR CCA 90 bp | TGTGAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTGCTCTGACCAAAACTGCAAAGAGCTGTaGAGTACATCAGGAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CEVAFFVFRRHSFLCSDQNCKEL*STSGET Trigger: GGTTTCTCCTGATGTACTCCACAGCTCTTTGCAGTT...TTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS-3UTR CAA 90 bp | TCGCTCCAACCACCGCTGTGGTCAGAGCTGAGTTGTAATAACTGCAAAGAGCTGGTCAGCAGCGCCTTGTaGACCAGCACGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLQPPLWSELSCNNCKELVSSAL*TSTMRK Trigger: CTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGAC...CAGCTCTTTGCAGTTATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGTCTCAGGACATGTCTGTCTCTGCTACCCAAAGCTGAGATAATTGATGTGGTCAGCAGCGCCTaGTTGACCAGCACGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLRTCLSLLPKAEIIDVVSSA*LTSTMR Trigger: CCTCATCGTGCTGGTCAACAAGGCGCTGCTGACCAC...ATCAATTATCTCAGCTTTGGGTAGCAGAGACAGACATGTCCTGAGACTCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
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| CDS TCA 90 bp | CCACCTGCCATGCTTGATCGCTCCAACCACCGCTGTGGTCAGAGCTaGGTTGTAATAACTGCAAAGAGCTGTGGAGTACATCAGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPAMLDRSNHRCGQS*VVITAKSCGVHQEK Trigger: TTTCTCCTGATGTACTCCACAGCTCTTTGCAGTTATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAGCGATCAAGCATGGCAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220792.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTCCTGAGTACAGTGAGCACTCTATACACCTCAACCCCAGGAATATTCCTGTCAGCAGCGCCTTGTaGACCAGCACGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPEYSEHSIHLNPRNIPVSSAL*TSTMRK Trigger: CTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGAC...AGGAATATTCCTGGGGTTGAGGTGTATAGAGTGCTCACTGTACTCAGGAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR CAA 90 bp | AGGATGATGTTCAATGAATATTGTGTCCCAAGTATGATAGCCTCCAGGAGTAAAGTGGTCAGCAGCGCCTaGTTGACCAGCACGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RMMFNEYCVPSMIASRSKVVSSA*LTSTMR Trigger: CCTCATCGTGCTGGTCAACAAGGCGCTGCTGACCAC...TTTACTCCTGGAGGCTATCATACTTGGGACACAATATTCATTGAACATCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
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| CDS-3UTR CAA 90 bp | AGGATGATGTTCAATGAATATTGTGTCCCAAGTATGATAGCCTCCAGGAGTAAAGTCAGCAGCGCCTTGTaGACCAGCACGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RMMFNEYCVPSMIASRSKVSSAL*TSTMRK Trigger: CTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGAC...TTTACTCCTGGAGGCTATCATACTTGGGACACAATATTCATTGAACATCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222794.2 ENSMUST00000223461.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCAGCAATGCCACCCAACCAGGGACCACACATTCAAATGTCTAAGACTAGCAAGCTTAATTTACTaGTGCTTGATAAGCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLQQCHPTRDHTFKCLRLASLIY*CLISHL Trigger: TAAGTGGCTTATCAAGCACAAGTAAATTAAGCTTGC...TAGTCTTAGACATTTGAATGTGTGGTCCCTGGTTGGGTGGCATTGCTGGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGTAGCTTTCTTTGTATTTCGAAGACATTCCTTTTTGTGCTCTGACCAATTCTTCATCCACAGGTaGTTTAGGTTTCAACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CEVAFFVFRRHSFLCSDQFFIHR*FRFQLA Trigger: AGCCAGTTGAAACCTAAACAACCTGTGGATGAAGAA...TTGGTCAGAGCACAAAAAGGAATGTCTTCGAAATACAAAGAAAGCTACCTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099441.6 |
||
| CDS CCA 72 bp | AGGAGCATGTGCCATAGAAGAGCGCCGACAGCAGCCTaGCCAGGCGAGAGGGCAACGGCGCCGCGTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSMCHRRAPTAA*PGERATAPRWA Trigger: AGCCCAACGCGGCGCCGTTGCCCTCTCGCCTGGCCAGGCTGCTGTCGGCGCTCTTCTATGGCACATGCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099441.6 ENSMUST00000220792.2 ENSMUST00000222168.2 ENSMUST00000222794.2 ENSMUST00000222866.2 ENSMUST00000223461.2 |
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| CDS CAA 72 bp | GTGAACATCGGCAAGCCGTATGTGGTCAGCAGCGCCTaGTTGACCAGCACGATGAGGAAGGAGCATGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VNIGKPYVVSSA*LTSTMRKEHVP Trigger: TGGCACATGCTCCTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGACCACATACGGCTTGCCGATGTTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222866.2 |
||
| CDS CAA 72 bp | TATGGTGGTAGCCATCCGTATGTGGTCAGCAGCGCCTaGTTGACCAGCACGATGAGGAAGGAGCATGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: YGGSHPYVVSSA*LTSTMRKEHVP Trigger: TGGCACATGCTCCTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGACCACATACGGATGGCTACCACCATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222794.2 |
||
| CDS CAA 72 bp | ATTGGTGAGGGAAAACCGTATGTGGTCAGCAGCGCCTaGTTGACCAGCACGATGAGGAAGGAGCATGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IGEGKPYVVSSA*LTSTMRKEHVP Trigger: TGGCACATGCTCCTTCCTCATCGTGCTGGTCAACAAGGCGCTGCTGACCACATACGGTTTTCCCTCACCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099441.6 ENSMUST00000220792.2 ENSMUST00000222168.2 |
||
| CDS TCA 72 bp | ATGCTTGATCGCTCCAACCACCGCTGTGGTCAGAGCTaGGTTGTAATAACTGCAAAGAGCTGTGGAGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: MLDRSNHRCGQS*VVITAKSCGVH Trigger: ATGTACTCCACAGCTCTTTGCAGTTATTACAACTCAGCTCTGACCACAGCGGTGGTTGGAGCGATCAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220792.2 |
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