Pregenerated sensors for SLC35D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028521Ensembl transcript IDs: ENSMUST00000036195.13, ENSMUST00000150285.8, ENSMUST00000183432.6
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCACTTATGTGCACACTGCCAACGGGAGGCAGAAGCTGAGGTCTaGGCCCAGGAATGCAGTCCTGAGCAGGCCCAGCACGCCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: KHLCAHCQREAEAEV*AQECSPEQAQHALA Trigger: GGCTAGGGCGTGCTGGGCCTGCTCAGGACTGCATTCCTGGGCCCAGACCTCAGCTTCTGCCTCCCGTTGGCAGTGTGCACATAAGTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR TCA 90 bp | CCCAGGCAGGCTTTGGACACGGTGATATCCTCTGCCTCAGCTACCTaGGTGCTGACGTGCCAGGCATGGGCCACCATGCCTTGCGATCAT | + |
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Preference number: 1 (lower is better) Translates to: PRQALDTVISSASAT*VLTCQAWATMPCDH Trigger: ATGATCGCAAGGCATGGTGGCCCATGCCTGGCACGTCAGCACTCAGGTAGCTGAGGCAGAGGATATCACCGTGTCCAAAGCCTGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR TCA 90 bp | AAAGAGGGGACCTACCTGGAGTCGGGCAAGGGTCAGCAAGGGGACTaGAGGCTGCCAGCCTTCTGCGTTTCCCAAGTTTCTCTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: KEGTYLESGKGQQGD*RLPAFCVSQVSLQG Trigger: GCCCTGCAGAGAAACTTGGGAAACGCAGAAGGCTGGCAGCCTTCAGTCCCCTTGCTGACCCTTGCCCGACTCCAGGTAGGTCCCCTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | GCCCCTCCAAAGCCAGCGATGCTTCAGAGCCATGCCACCCAGCTCTaGCAATCACTCCTCCCTAAGGCAGTTCAGTCAATGTCCACTCAC | + |
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Preference number: 1 (lower is better) Translates to: APPKPAMLQSHATQL*QSLLPKAVQSMSTH Trigger: GTGAGTGGACATTGACTGAACTGCCTTAGGGAGGAGTGATTGCCAGAGCTGGGTGGCATGGCTCTGAAGCATCGCTGGCTTTGGAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR CCA 90 bp | AGCAGAGACAACGTCCATCATCATAGACGCCTCTGTTGGGCAGTCTaGTTCCAGAGACCTGAGGCTGCTGGTTCACTGTGGAGCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SRDNVHHHRRLCWAV*FQRPEAAGSLWSRP Trigger: AGGCCTGCTCCACAGTGAACCAGCAGCCTCAGGTCTCTGGAACCAGACTGCCCAACAGAGGCGTCTATGATGATGGACGTTGTCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | GCCAGCACCGATGCTTCTGACACTGTCCTGGAAGAAGGTGCTGCATaGAAATCCCAAATGCAGCTGATCTTCCAGCAGGTGCAGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: ASTDASDTVLEEGAA*KSQMQLIFQQVQQV Trigger: CACCTGCTGCACCTGCTGGAAGATCAGCTGCATTTGGGATTTCCATGCAGCACCTTCTTCCAGGACAGTGTCAGAAGCATCGGTGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR TCA 90 bp | CAACATTTGATCTGCCTGACTCATTCTGCACGTGTCAAAGCAGGGTaGGAGCAAAGAGGGGACCTACCTGGAGTCGGGCAAGGGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: QHLICLTHSARVKAG*EQRGDLPGVGQGSA Trigger: TGCTGACCCTTGCCCGACTCCAGGTAGGTCCCCTCTTTGCTCTCACCCTGCTTTGACACGTGCAGAATGAGTCAGGCAGATCAAATGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | CCTGCGAGGGACTTTCACTGCACTCCAGCTGAACGAGTGAGTGAATaGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: PARDFHCTPAERVSE*LASSTLACLQLNKE Trigger: CTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTCACTCACTCGTTCAGCTGGAGTGCAGTGAAAGTCCCTCGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR CCA 90 bp | TGTAATGAGAGCAGAGACAACGTCCATCATCATAGACGCCTCTGTTaGGCAGTCTGGTTCCAGAGACCTGAGGCTGCTGGTTCACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: CNESRDNVHHHRRLC*AVWFQRPEAAGSLW Trigger: CCACAGTGAACCAGCAGCCTCAGGTCTCTGGAACCAGACTGCCCAACAGAGGCGTCTATGATGATGGACGTTGTCTCTGCTCTCATTACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR GCA 90 bp | AAGGTCCGACTCTGGCTGAGGACTACACTTGAGAGTTCCAGGCTCTaGCCCCTCTATCTGTCCATGTGGTTAACAATGTGCTGGTCACTA | + |
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Preference number: 1 (lower is better) Translates to: KVRLWLRTTLESSRL*PLYLSMWLTMCWSL Trigger: TAGTGACCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCAGAGCCTGGAACTCTCAAGTGTAGTCCTCAGCCAGAGTCGGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | GGCACTGAAGGAAGGATGGCAGACCTGTGTCTGCTGAGCGCTGTGTaGACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: GTEGRMADLCLLSAV*TGFHIQYPLHSFSV Trigger: TACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGCTCAGCAGACACAGGTCTGCCATCCTTCCTTCAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | AGTTCCAGGCTCTGCCCCCTCTATCTGTCCATGTGGTTAACAATGTaGTGGTCACTAAGAGCCCTCAATATGGAAAGCAAAGGCCAGACC | + |
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Preference number: 1 (lower is better) Translates to: SSRLCPLYLSMWLTM*WSLRALNMESKGQT Trigger: GGTCTGGCCTTTGCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCAGAGCCTGGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | GCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAACATGGTaGCCTATGCTGCTGGCACTGAAGGAAGGATGGCAGACCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: ASEGKKQFHESWKTW*PMLLALKEGWQTCV Trigger: GACACAGGTCTGCCATCCTTCCTTCAGTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR CCA 90 bp | AACAGGGATACAAAGAGCAGCAACTACATCCACATGATGAAGGCATaGGGACGGGGTGGCAGCTGCCTTGATTGTCCCTTTAAGAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: NRDTKSSNYIHMMKA*GRGGSCLDCPFKKR Trigger: CCTTTTCTTAAAGGGACAATCAAGGCAGCTGCCACCCCGTCCCCATGCCTTCATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR TCA 90 bp | AGCATGCAAACACTTGATCTTCACAAGATGACAGTGCTCTGGCTGTaGACCAATGAGGGCAAAGACATGATGCAGGCTCTGCTCTCGTTC | + |
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Preference number: 1 (lower is better) Translates to: SMQTLDLHKMTVLWL*TNEGKDMMQALLSF Trigger: GAACGAGAGCAGAGCCTGCATCATGTCTTTGCCCTCATTGGTTCACAGCCAGAGCACTGTCATCTTGTGAAGATCAAGTGTTTGCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | ACTACACTTGAGAGTTCCAGGCTCTGCCCCCTCTATCTGTCCATGTaGTTAACAATGTGCTGGTCACTAAGAGCCCTCAATATGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TTLESSRLCPLYLSM*LTMCWSLRALNMES Trigger: GCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCAGAGCCTGGAACTCTCAAGTGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | CAGGCTGGACTTGAACTCACGATAGTCTTGGCTCAGCCTCTGGAGTaGTGGGATTACAGTATTGCCACCACATGCAGATTCAATTATTCA | + |
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Preference number: 1 (lower is better) Translates to: QAGLELTIVLAQPLE*WDYSIATTCRFNYS Trigger: TGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTCAAGTCCAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR GCA 90 bp | AGCTGCCTTGATTGTCCCTTTAAGAAAAGGGTTAGGCTGAGCCACTaGTATGCTGGTGTACAAAATATAGCTGTTCAGTCTCTTGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SCLDCPFKKRVRLSH*YAGVQNIAVQSLVG Trigger: GCCCACAAGAGACTGAACAGCTATATTTTGTACACCAGCATAGCAGTGGCTCAGCCTAACCCTTTTCTTAAAGGGACAATCAAGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | CACGATAGTCTTGGCTCAGCCTCTGGAGTGCTGGGATTACAGTATTaGCACCACATGCAGATTCAATTATTCATTCACTCGTTCGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: HDSLGSASGVLGLQY*HHMQIQLFIHSFGH Trigger: ATGACCGAACGAGTGAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | GCTGGACTTGAACTCACGATAGTCTTGGCTCAGCCTCTGGAGTGCTaGGATTACAGTATTGCCACCACATGCAGATTCAATTATTCATTC | + |
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Preference number: 1 (lower is better) Translates to: AGLELTIVLAQPLEC*DYSIATTCRFNYSF Trigger: GAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTCAAGTCCAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CCA 90 bp | TTAAATAGCCAAAGAAAATGTGACCATTCCTGCACTACTCGGCTCTaGGGTCGAGTGCTGAGAGCAGTTATCAACCCTGACTATAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LNSQRKCDHSCTTRL*GRVLRAVINPDYKG Trigger: GCCTTTATAGTCAGGGTTGATAACTGCTCTCAGCACTCGACCCCAGAGCCGAGTAGTGCAGGAATGGTCACATTTTCTTTGGCTATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR GCA 90 bp | TCAATAAATTTCCAAAGGCAGCAGTCAATCCCAGGGTTGTATAATTaGAAAGGAACATTGACTCCCCGCAATCAGGAGGCTCCAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SINFQRQQSIPGLYN*KGTLTPRNQEAPVS Trigger: AGACACTGGAGCCTCCTGATTGCGGGGAGTCAATGTTCCTTTGCAATTATACAACCCTGGGATTGACTGCTGCCTTTGGAAATTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR GCA 90 bp | ACCAATCAGTTCAGAAATGTAGGCCTTTGTGTGGAAATGAGGACCTaGAAACAGGGATACAAAGAGCAGCAACTACATCCACATGATGAA | + |
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Preference number: 1 (lower is better) Translates to: TNQFRNVGLCVEMRT*KQGYKEQQLHPHDE Trigger: TTCATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCGCAGGTCCAAAGAGCTaGAGTAACTGGTGCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCAGPKS*SNWCTV Trigger: GACTGTGCACCAGTTACTTCAGCTCTTTGGACCTGC...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAACTCCAGAGGCCTGTGTCTCCATCTCAGCTTAACTCAGACTGGAGCAACGGGAGGCAGAAGCTaGGGTCTGGGCCCAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: RENSRGLCLHLSLTQTGATGGRS*GLGPGM Trigger: CATTCCTGGGCCCAGACCTCAGCTTCTGCCTCCCGT...TGCTCCAGTCTGAGTTAAGCTGAGATGGAGACACAGGCCTCTGGAGTTTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR GCA 90 bp | AAACTCCAGAGGCCTGTGTCTCCATCTCAGCTTAACTCAGACTGGAGCAGGGAGGCTATGGGAGACGCGTaGAGTCAGGCACAGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KLQRPVSPSQLNSDWSREAMGDA*SQAQKP Trigger: TGGCTTCTGTGCCTGACTGCACGCGTCTCCCATAGC...CTCCCTGCTCCAGTCTGAGTTAAGCTGAGATGGAGACACAGGCCTCTGGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CAA 90 bp | AATGAGGGCAAAGACATGATGCAGGCTCTGCTCTCGTTCACGTGTTaGCCAGCACCGATGCTTCTGACACTGTCCTGGAAGAAGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: NEGKDMMQALLSFTC*PAPMLLTLSWKKVL Trigger: CAGCACCTTCTTCCAGGACAGTGTCAGAAGCATCGGTGCTGGCAAACACGTGAACGAGAGCAGAGCCTGCATCATGTCTTTGCCCTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGATACAAAGAGCAGCAACTACATCCACATGATGAAGGCATGGGGACGGGGTTTCCCAGGCACACTCTaGTCACCCCACAGTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RDTKSSNYIHMMKAWGRGFPGTL*SPHSLG Trigger: TCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAA...ACCCCGTCCCCATGCCTTCATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGGTGGCAGCTGCCTTGATTGTCCCTTTAAGAAAAGGGTTAGGCTGAGCCACGGCTTCTTCCACCCTTaGTTGTCTCCAGCTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: RGGSCLDCPFKKRVRLSHGFFHP*LSPAEQ Trigger: TTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCC...GTGGCTCAGCCTAACCCTTTTCTTAAAGGGACAATCAAGGCAGCTGCCACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTGTCTGGGCCCAGGAATaGAGTCCTGAGCAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: IDTKWVSGGGEQALYKKCVWAQE*SPEQAQ Trigger: CTGGGCCTGCTCAGGACTGCATTCCTGGGCCCAGAC...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCAGGATTTCAAAACACTaGTGCTTCACTGTCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCRISKH*CFTVRG Trigger: TCCTCTGACAGTGAAGCATCAGTGTTTTGAAATCCT...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCCACCTTTGGCAAATGTaGTACTATGAAGACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCHLWQM*YYEDSA Trigger: TGCACTGTCTTCATAGTATCACATTTGCCAAAGGTG...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATGTGCTGGTCACTAAGAGCCCTCAATATGGAAAGCAAAGGCCAGACCTACCCTCAGTGGCCCTGTaGCCCACTAACACTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: NNVLVTKSPQYGKQRPDLPSVAL*PTNTPW Trigger: CCATGGAGTGTTAGTGGGTCACAGGGCCACTGAGGG...TAGGTCTGGCCTTTGCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGTTCCCAGGCACACTCTaGTCACCCCACAGTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: FHYSLWEKAAWHRRGKKEFPGTL*SPHSLG Trigger: TCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAA...CTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTCTGACGTGCCAGGCATaGGCCACCATGCCTTGCGAT | + |
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Preference number: 2 (lower is better) Translates to: IDTKWVSGGGEQALYKKCLTCQA*ATMPCD Trigger: ATCGCAAGGCATGGTGGCCCATGCCTGGCACGTCAG...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR CCA 90 bp | CTATATAGCAAGTTCCAGAGCAGCCAAGGCTGCACAGTGAGACTGTATCTCAGAGCAGAAGCTGAGGTCTaGGCCCAGGAATGCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LYSKFQSSQGCTVRLYLRAEAEV*AQECSP Trigger: AGGACTGCATTCCTGGGCCCAGACCTCAGCTTCTGC...TCTGAGATACAGTCTCACTGTGCAGCCTTGGCTGCTCTGGAACTTGCTATATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGAATCCACCTTCAGGCTCTACCCCACCTTACTAAGGGTCTCGCATATCCTGCACATAGACACCAAGTaGGTAAGTGGAGGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LESTFRLYPTLLRVSHILHIDTK*VSGGGE Trigger: CTCTCCTCCTCCACTTACCCACTTGGTGTCTATGTG...CAGGATATGCGAGACCCTTAGTAAGGTGGGGTAGAGCCTGAAGGTGGATTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CAA 90 bp | AGACCTCACTACATAGCACAGGCTGGACTTGAACTCACGATAGTCTaGGCTCAGCCTCTGGAGTGCTGGGATTACAGTATTGCCACCACA | + |
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Preference number: 2 (lower is better) Translates to: RPHYIAQAGLELTIV*AQPLECWDYSIATT Trigger: TGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTCAAGTCCAGCCTGTGCTATGTAGTGAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGGCAGGTCCAAAGAGCTaGAGTAACTGGTGCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: FHYSLWEKAAWHRRGKKEAGPKS*SNWCTV Trigger: GACTGTGCACCAGTTACTTCAGCTCTTTGGACCTGC...CTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCTCTGTAGGTGAGAGCTaGCCTCACATCACTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IIACGRKQHGTDVGRKSISVGES*PHITSG Trigger: CCCTGAAGTGATGTGAGGTCAGCTCTCACCTACAGA...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGAGCTCTATGACAAAGAAAGCCAAAATCCAGATAGCTGTTTTCTTACGGCCAGGAATGCAGTCCTaGGCAGGCCCAGCACGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TQSSMTKKAKIQIAVFLRPGMQS*AGPARP Trigger: AGGGCGTGCTGGGCCTGCTCAGGACTGCATTCCTGG...CCGTAAGAAAACAGCTATCTGGATTTTGGCTTTCTTTGTCATAGAGCTCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAACTCCAGAGGCCTGTGTCTCCATCTCAGCTTAACTCAGACTGGAGCAATGAGGGCAAAGACATaGTGCAGGCTCTGCTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: RENSRGLCLHLSLTQTGAMRAKT*CRLCSR Trigger: ACGAGAGCAGAGCCTGCATCATGTCTTTGCCCTCAT...TGCTCCAGTCTGAGTTAAGCTGAGATGGAGACACAGGCCTCTGGAGTTTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAAGCAGTTTCATGAGTCTTGGAAAACATGGTGCCCTATGCTGCTGGCACCTGTTCAGTCTCTTGTaGGCTCTGGACTCATGGCGT | + |
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Preference number: 2 (lower is better) Translates to: ARSSFMSLGKHGALCCWHLFSLL*ALDSWR Trigger: ACGCCATGAGTCCAGAGCCCACAAGAGACTGAACAG...GTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGATTACAGTATTGCCACCACATGCAGATTCAATTATTCATTCACTCGTTCAGCTACCTGAGTGCTaGCGTGCCAGGCATGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: AGITVLPPHADSIIHSLVQLPEC*RARHGP Trigger: TGGCCCATGCCTGGCACGTCAGCACTCAGGTAGCTG...AACGAGTGAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAAGCAGTTTCATGAGTCTTGGAAAACATGGTGCCCTATGCTGCTGGCACACACATTGTATACACTaGCAGGGCCACCCAGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: ARSSFMSLGKHGALCCWHTHCIH*QGHPDS Trigger: GCTATCTGGGTGGCCCTGGCAGTGTATACAATGTGT...GTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAATGTGCTGGTCACTAAGAGCCCTCAATATGGAAAGCAAAGGCCAGACCTACAGCACTCAGCACAGTaGCTGCGAGGGACTTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: NNVLVTKSPQYGKQRPDLQHSAQ*LRGTFT Trigger: AGTGAAAGTCCCTCGCAGGCACTGTGCTGAGTGCTG...TAGGTCTGGCCTTTGCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAATCCACCTTCAGGCTCTACCCCACCTTACTAAGGGTCTCGCATATCCTGCTTCTAGCACTCACTTaGCAACTGCCCAAATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LESTFRLYPTLLRVSHILLLALT*QLPKFP Trigger: AGGAAATTTGGGCAGTTGGCAAGTGAGTGCTAGAAG...CAGGATATGCGAGACCCTTAGTAAGGTGGGGTAGAGCCTGAAGGTGGATTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTGTTGCCTAAGCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAACACATGATGAAGGCATaGGGACGGGGTGGCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLLPKHLKARSSFMSLGKHMMKA*GRGGSC Trigger: GCAGCTGCCACCCCGTCCCCATGCCTTCATCATGTG...TTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGCTTAGGCAACAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 90 bp | ACTAGTCTTAGAACAAAGACTGGGTCCTCTTTGGCTCTAATCTCTTaGTTCAGGAAAAGCAAGGCTTCCCCGGGTCTCTGGCTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TSLRTKTGSSLALIS*FRKSKASPGLWLLS Trigger: GCTGAGAAGCCAGAGACCCGGGGAAGCCTTGCTTTTCCTGAACAAAGAGATTAGAGCCAAAGAGGACCCAGTCTTTGTTCTAAGACTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCTTGCTTGTCTCCAGCTaGACAAAGAGGAAGCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: IIACGRKQHGTDVGRKSILLVSS*TKRKQT Trigger: TGTCTGCTTCCTCTTTGTTCAGCTGGAGACAAGCAA...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCCCAATAATGGAAAGATaGCCACCTAGCTCTTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: IIACGRKQHGTDVGRKSIPIMER*PPSSSL Trigger: GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGG...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGAAGCAGTTTCATGAGTCTTGGAAAACATGGTGCCCTATGCTGCTGGCACAAGAAAGAGCATCATTaGCAGAGAAGGACTCGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ARSSFMSLGKHGALCCWHKKEHH*QRRTRG Trigger: TCCCCGAGTCCTTCTCTGGCAATGATGCTCTTTCTT...GTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGATTCATGTGCAATCTGTCTCACCTACTGGAATCAAGGCCCCACTTAGGCAGGGAGAGGCAAAATCCTaGCCAACTGGAAACTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: VIHVQSVSPTGIKAPLRQGEAKS*PTGNYF Trigger: GAAGTAGTTTCCAGTTGGCCAGGATTTTGCCTCTCC...CTGCCTAAGTGGGGCCTTGATTCCAGTAGGTGAGACAGATTGCACATGAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CAA 90 bp | CACCTAGCTCTTCCCTCACACCAATCAGTTCAGAAATGTAGGCCTTaGTGTGGAAATGAGGACCTGCAAACAGGGATACAAAGAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HLALPSHQSVQKCRP*CGNEDLQTGIQRAA Trigger: TGCTGCTCTTTGTATCCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTGGTGTGAGGGAAGAGCTAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGATACAAAGAGCAGCAACTACATCCACATGATGAAGGCATGGGGACGGGGTAGGATTTCAAAACACTaGTGCTTCACTGTCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RDTKSSNYIHMMKAWGRGRISKH*CFTVRG Trigger: TCCTCTGACAGTGAAGCATCAGTGTTTTGAAATCCT...ACCCCGTCCCCATGCCTTCATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAAGAAAAGACCAAGTTCCAATAATGGAAAGATGCCCACCTAGCTCTTCCCTCGCCTTTGTGTGGAAATaGGGACCTGCAAACAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PRKDQVPIMERCPPSSSLAFVWK*GPANRD Trigger: ATCCCTGTTTGCAGGTCCTCATTTCCACACAAAGGC...GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGGAACTTGGTCTTTTCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCCCCATTCACTCAGATGAGCCTTATAAAGCGACTTTCCCCAGCTGTAGTTCTGGCTGTGAACCAATaGGGGCAAAGACATGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSPFTQMSLIKRLSPAVVLAVNQ*GQRHDA Trigger: TGCATCATGTCTTTGCCCTCATTGGTTCACAGCCAG...AACTACAGCTGGGGAAAGTCGCTTTATAAGGCTCATCTGAGTGAATGGGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGGTGGAAATGAGGACCTaGAAACAGGGATACAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FHYSLWEKAAWHRRGKKEVEMRT*KQGYKE Trigger: CTCTTTGTATCCCTGTTTGCAGGTCCTCATTTCCAC...CTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATCCAATAATGGAAAGATaGCCACCTAGCTCTTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ALCALGSIFSIHCTHSQYPIMER*PPSSSL Trigger: GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGG...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAATCCACCTTCAGGCTCTACCCCACCTTACTAAGGGTCTCGCATATCCTGTTTGAGATAGTGTTTTaGTTTATAGTCCAGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LESTFRLYPTLLRVSHILFEIVF*FIVQAG Trigger: GCCAGCCTGGACTATAAAGCAAAACACTATCTCAAA...CAGGATATGCGAGACCCTTAGTAAGGTGGGGTAGAGCCTGAAGGTGGATTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCTCTTACTACGTGATTCATGTGCAATCTGTCTCACCTACTGGAATCAAGCAGAGCAGCCAAGGCTaGACAGTGAGACTGTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: HSSYYVIHVQSVSPTGIKQSSQG*TVRLYL Trigger: GAGATACAGTCTCACTGTGCAGCCTTGGCTGCTCTG...CTTGATTCCAGTAGGTGAGACAGATTGCACATGAATCACGTAGTAAGAGCTGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGAGCTCTATGACAAAGAAAGCCAAAATCCAGATAGCTGTTTTCTTACGGCAGGCCTCAAACACCTaGCTTCTGAGGGTCTGGACG | + |
|
Preference number: 2 (lower is better) Translates to: TQSSMTKKAKIQIAVFLRQASNT*LLRVWT Trigger: CGTCCAGACCCTCAGAAGCCAGGTGTTTGAGGCCTG...CCGTAAGAAAACAGCTATCTGGATTTTGGCTTTCTTTGTCATAGAGCTCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCTCTGCTCTCGTTCACGTGTTTGCCAGCACCGATGCTTCTGACACTGTCCTCATATGTCTCAGGCTaGTTTCAAACTCACTATATA | + |
|
Preference number: 2 (lower is better) Translates to: QALLSFTCLPAPMLLTLSSYVSG*FQTHYI Trigger: TATATAGTGAGTTTGAAACCAGCCTGAGACATATGA...GGACAGTGTCAGAAGCATCGGTGCTGGCAAACACGTGAACGAGAGCAGAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCCCATTCACTCAGATGAGCCTTATAAAGCGACTTTCCCCAGCTGTAGTTTCTTGGCTCAGCCTCTaGAGTGCTGGGATTACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VSPFTQMSLIKRLSPAVVSWLSL*SAGITV Trigger: TACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGA...AACTACAGCTGGGGAAAGTCGCTTTATAAGGCTCATCTGAGTGAATGGGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGAAGCAGTTTCATGAGTCTTGGAAAACATGGTGCCCTATGCTGCTGGCACGAGATATATCCATTCTaGGATGCTCATCAGGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ARSSFMSLGKHGALCCWHEIYPF*DAHQVD Trigger: GTCTACCTGATGAGCATCTCAGAATGGATATATCTC...GTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTGTTGCCTAAGCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAAAGGTCCGACTCTGGCTaGGGACTACACTTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLPKHLKARSSFMSLGKRSDSG*GLHLRV Trigger: AACTCTCAAGTGTAGTCCTCAGCCAGAGTCGGACCT...TTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGCTTAGGCAACAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAATTGGTAAATAGAGTCTATATTGAAAAGACGTGTGAGAGGCGAACACCTCAGACCTGTGTCTGCTaGGCGCTGTGTGCACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SKLVNRVYIEKTCERRTPQTCVC*ALCALG Trigger: ACCCAGTGCACACAGCGCTCAGCAGACACAGGTCTG...AGGTGTTCGCCTCTCACACGTCTTTTCAATATAGACTCTATTTACCAATTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR TCA 90 bp | GTGATTCATGTGCAATCTGTCTCACCTACTGGAATCAAGGCCCCACTTAGGCAGTCACTCAGAGCTCTATaGCAAAGAAAGCCAAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: VIHVQSVSPTGIKAPLRQSLRAL*QRKPKS Trigger: GGATTTTGGCTTTCTTTGTCATAGAGCTCTGAGTGA...CTGCCTAAGTGGGGCCTTGATTCCAGTAGGTGAGACAGATTGCACATGAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | AGCACTTTCTCCTCAAAGCTTAGAACCCACTTTTGTGTCTGCCCAGGTTACTCTAGGGGTAAGGCCATCTaGCTAAGACAAAATACGAGC | + |
|
Preference number: 2 (lower is better) Translates to: STFSSKLRTHFCVCPGYSRGKAI*LRQNTS Trigger: GCTCGTATTTTGTCTTAGTCAGATGGCCTTACCCCT...AGAGTAACCTGGGCAGACACAAAAGTGGGTTCTAAGCTTTGAGGAGAAAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | GTGATTCATGTGCAATCTGTCTCACCTACTGGAATCAAGGCCCCACTTAGGCAGCAGCATGCAAACACTTaGTCTTCACAAGATGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: VIHVQSVSPTGIKAPLRQQHANT*SSQDDS Trigger: ACTGTCATCTTGTGAAGATCAAGTGTTTGCATGCTG...CTGCCTAAGTGGGGCCTTGATTCCAGTAGGTGAGACAGATTGCACATGAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR GCA 90 bp | AGCACTTTCTCCTCAAAGCTTAGAACCCACTTTTGTGTCTGCCCAGGTTACTCTCCTGGAAGAAGGTGCTaGATGGAAATCCCAAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: STFSSKLRTHFCVCPGYSPGRRC*MEIPNA Trigger: TGCATTTGGGATTTCCATGCAGCACCTTCTTCCAGG...AGAGTAACCTGGGCAGACACAAAAGTGGGTTCTAAGCTTTGAGGAGAAAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAACTCCAGAGGCCTGTGTCTCCATCTCAGCTTAACTCAGACTGGAGCAGACGCAAGTCACAACTaGATGTGTCTATATGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RENSRGLCLHLSLTQTGADASHN*MCLYVK Trigger: CTTTACATATAGACACATTCAGTTGTGACTTGCGTC...TGCTCCAGTCTGAGTTAAGCTGAGATGGAGACACAGGCCTCTGGAGTTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| 3UTR CAA 90 bp | AGCATACAGTCAATAAATTTCCAAAGGCAGCAGTCAATCCCAGGGTaGTATAATTGCAAAGGAACATTGACTCCCCGCAATCAGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SIQSINFQRQQSIPG*YNCKGTLTPRNQEA Trigger: AGCCTCCTGATTGCGGGGAGTCAATGTTCCTTTGCAATTATACAACCCTGGGATTGACTGCTGCCTTTGGAAATTTATTGACTGTATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATCCTCCCACATATTTCTaGTACAAGATCACAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ALCALGSIFSIHCTHSQYPPTYF*YKITEN Trigger: GTTTTCTGTGATCTTGTATCAGAAATATGTGGGAGG...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAAAGACCAAGTTCCAATAATGGAAAGATGCCCACCTAGCTCTTCCCTCGAGCCACTGCTATGCTaGTGTACAAAATATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PRKDQVPIMERCPPSSSLEPLLC*CTKYSC Trigger: ACAGCTATATTTTGTACACCAGCATAGCAGTGGCTC...GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGGAACTTGGTCTTTTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTAAATTGGTAAATAGAGTCTATATTGAAAAGACGTGTGAGAGGCGAACACCTAGGTCCGACTCTGGCTaGGGACTACACTTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SKLVNRVYIEKTCERRTPRSDSG*GLHLRV Trigger: AACTCTCAAGTGTAGTCCTCAGCCAGAGTCGGACCT...AGGTGTTCGCCTCTCACACGTCTTTTCAATATAGACTCTATTTACCAATTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR GCA 90 bp | TATCTATCTATCTATTTATTTAGGCAGACTCTCATATGTCTCAGGCTGGTTTCATGGAAAGCACTTATGTaGACACTGCCAACGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: YLSIYLFRQTLICLRLVSWKALM*TLPTGG Trigger: GCCTCCCGTTGGCAGTGTGCACATAAGTGCTTTCCA...TGAAACCAGCCTGAGACATATGAGAGTCTGCCTAAATAAATAGATAGATAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATTTTCCATTCAGTCTAGAGCAGGACCATTACCAATGGATCTCTGTATTCCACCTTTGGCAAATGTaGTACTATGAAGACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: FHFPFSLEQDHYQWISVFHLWQM*YYEDSA Trigger: TGCACTGTCTTCATAGTATCACATTTGCCAAAGGTG...GAATACAGAGATCCATTGGTAATGGTCCTGCTCTAGACTGAATGGAAAATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTAAATTGGTAAATAGAGTCTATATTGAAAAGACGTGTGAGAGGCGAACACCTGAGATATATCCATTCTaGGATGCTCATCAGGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SKLVNRVYIEKTCERRTPEIYPF*DAHQVD Trigger: GTCTACCTGATGAGCATCTCAGAATGGATATATCTC...AGGTGTTCGCCTCTCACACGTCTTTTCAATATAGACTCTATTTACCAATTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 90 bp | CCCAAATTTCCTGTACTTCTATTTCACATCAGGCCCCTCACTAAGTaGTCAGAATACAACCATAATCATGAAGACATTGTTCTTTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PKFPVLLFHIRPLTK*SEYNHNHEDIVLCE Trigger: TTCACAAAGAACAATGTCTTCATGATTATGGTTGTATTCTGACAACTTAGTGAGGGGCCTGATGTGAAATAGAAGTACAGGAAATTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAGAGCTCTCTTCAAAGACTAAAGTCCACAGAAACCTTTATTTTCTTCTATGGGCCACCATGCCTTaGGATCATAAATTTATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TEELSSKTKVHRNLYFLLWATMP*DHKFIS Trigger: GCTAATAAATTTATGATCGCAAGGCATGGTGGCCCA...TAGAAGAAAATAAAGGTTTCTGTGGACTTTAGTCTTTGAAGAGAGCTCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAGTCCAAACTGCTCTTTCCACTTTTAAACAAGGATAAGAAACTGCTACTAAAGCAGAGAGCATTGTaGAAAGCACTTATGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: CKSKLLFPLLNKDKKLLLKQRAL*KALMCT Trigger: TGTGCACATAAGTGCTTTCCACAATGCTCTCTGCTT...TAGTAGCAGTTTCTTATCCTTGTTTAAAAGTGGAAAGAGCAGTTTGGACTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | CAACGGGAGGCAGAAGCTGAGGTCTGGGCCCAGGAATaGAGTCCTGAGCAGGCCCAGCACGCCCTAGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QREAEAEVWAQE*SPEQAQHALAL Trigger: GAGGGCTAGGGCGTGCTGGGCCTGCTCAGGACTGCATTCCTGGGCCCAGACCTCAGCTTCTGCCTCCCGTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | TTCCAGCAGGTGCAGCAGGTGGCTATGGGAGACGCGTaGAGTCAGGCACAGAAGCCAGGGCTCTGCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQQVQQVAMGDA*SQAQKPGLCRH Trigger: GTGCCTGCAGAGCCCTGGCTTCTGTGCCTGACTGCACGCGTCTCCCATAGCCACCTGCTGCACCTGCTGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | CATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATaGTTCAGAGCCATGCCACCCAGCTCTGGCAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: HAGPSKPLQSQR*FRAMPPSSGNH Trigger: GTGATTGCCAGAGCTGGGTGGCATGGCTCTGAAGCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR GCA 72 bp | GCACCCCAGGCAGGCTTTGGACACGGTGATATCCTCTaGCTCAGCTACCTGAGTGCTGACGTGCCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: APQAGFGHGDIL*LSYLSADVPGM Trigger: CATGCCTGGCACGTCAGCACTCAGGTAGCTGAGGCAGAGGATATCACCGTGTCCAAAGCCTGCCTGGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | GCTTTGGACACGGTGATATCCTCTGCCTCAGCTACCTaGGTGCTGACGTGCCAGGCATGGGCCACCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALDTVISSASAT*VLTCQAWATMP Trigger: AGGCATGGTGGCCCATGCCTGGCACGTCAGCACTCAGGTAGCTGAGGCAGAGGATATCACCGTGTCCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | TGGAGTCGGGCAAGGGTCAGCAAGGGGACTGAAGGCTaGCAGCCTTCTGCGTTTCCCAAGTTTCTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WSRARVSKGTEG*QPSAFPKFLCR Trigger: CCTGCAGAGAAACTTGGGAAACGCAGAAGGCTGGCAGCCTTCAGTCCCCTTGCTGACCCTTGCCCGACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | ACCTACCTGGAGTCGGGCAAGGGTCAGCAAGGGGACTaGAGGCTGCCAGCCTTCTGCGTTTCCCAAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TYLESGKGQQGD*RLPAFCVSQVS Trigger: AGAAACTTGGGAAACGCAGAAGGCTGGCAGCCTTCAGTCCCCTTGCTGACCCTTGCCCGACTCCAGGTAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | AAGCAAAGGCCAGACCTAAAGCCCTCAGTGGCCCTGTaGCCCACTAACACTCCATGGAGAGCCTGTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQRPDLKPSVAL*PTNTPWRACLG Trigger: GCCAAGACAGGCTCTCCATGGAGTGTTAGTGGGTCACAGGGCCACTGAGGGCTTTAGGTCTGGCCTTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR GCA 72 bp | AGCAGAGAGCATTGTGGAAAGCACTTATGTGCACACTaGCAACGGGAGGCAGAAGCTGAGGTCTGGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SREHCGKHLCAH*QREAEAEVWAQ Trigger: CTGGGCCCAGACCTCAGCTTCTGCCTCCCGTTGGCAGTGTGCACATAAGTGCTTTCCACAATGCTCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCTCTAGCTGGAACACATaGTATACACTGCCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCSSWNT*YTLPGP Trigger: TGGCCCTGGCAGTGTATACAATGTGTTCCAGCTAGA...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | CTGCGAGGGACTTTCACTGCACTCCAGCTGAACGAGTaGGTGAATGGCTGGCTTCTTCCACCCTTGCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRGTFTALQLNE*VNGWLLPPLLV Trigger: GACAAGCAAGGGTGGAAGAAGCCAGCCATTCACTCACTCGTTCAGCTGGAGTGCAGTGAAAGTCCCTCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | AGTCTTGGAAAACATGGTGCCCTATGCTGCTGGCACTaGAGGAAGGATGGCAGACCTGTGTCTGCTGAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: SLGKHGALCCWH*RKDGRPVSAER Trigger: GCGCTCAGCAGACACAGGTCTGCCATCCTTCCTTCAGTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | GTTTCCAGAGACAGCCCACTGGAAGGCAGCTCTAGCTaGAACACATTGTATACACTGCCAGGGCCACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSRDSPLEGSSS*NTLYTLPGPPR Trigger: TCTGGGTGGCCCTGGCAGTGTATACAATGTGTTCCAGCTAGAGCTGCCTTCCAGTGGGCTGTCTCTGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | AAGCCAGCGATGCTTCAGAGCCATGCCACCCAGCTCTaGCAATCACTCCTCCCTAAGGCAGTTCAGTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: KPAMLQSHATQL*QSLLPKAVQSM Trigger: CATTGACTGAACTGCCTTAGGGAGGAGTGATTGCCAGAGCTGGGTGGCATGGCTCTGAAGCATCGCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | AGCAGAGACAACGTCCATCATCATAGACGCCTCTGTTaGGCAGTCTGGTTCCAGAGACCTGAGGCTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SRDNVHHHRRLC*AVWFQRPEAAG Trigger: ACCAGCAGCCTCAGGTCTCTGGAACCAGACTGCCCAACAGAGGCGTCTATGATGATGGACGTTGTCTCTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAATCCACCTTCAGGCTCTACCCCACCTTACTAAGGGTCTCGCATATCCTGAGCCCTCAGTCATCCTaGTCCCATGCACCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LESTFRLYPTLLRVSHILSPQSS*SHAPLS Trigger: AGACAAGGGTGCATGGGACAAGGATGACTGAGGGCT...CAGGATATGCGAGACCCTTAGTAAGGTGGGGTAGAGCCTGAAGGTGGATTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | TGGAAGAAGGTGCTGCATGGAAATCCCAAATGCAGCTaGTCTTCCAGCAGGTGCAGCAGGTGGCTATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WKKVLHGNPKCS*SSSRCSRWLWE Trigger: CTCCCATAGCCACCTGCTGCACCTGCTGGAAGATCAGCTGCATTTGGGATTTCCATGCAGCACCTTCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | CAGTGCTCTGGCTGTGAACCAATGAGGGCAAAGACATaGTGCAGGCTCTGCTCTCGTTCACGTGTTTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QCSGCEPMRAKT*CRLCSRSRVCQ Trigger: CTGGCAAACACGTGAACGAGAGCAGAGCCTGCATCATGTCTTTGCCCTCATTGGTTCACAGCCAGAGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | AAGGCACTGGGCTCACACCAGCTGTTGGAACAGAGCTaGGTGTCTTTGCTCCAGAAAGCATGGTACCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: KALGSHQLLEQS*VSLLQKAWYLV Trigger: GACGAGGTACCATGCTTTCTGGAGCAAAGACACTCAGCTCTGTTCCAACAGCTGGTGTGAGCCCAGTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | GGAAGGATGGCAGACCTGTGTCTGCTGAGCGCTGTGTaGACTGGGTTCCATATTCAGTATCCACTGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRMADLCLLSAV*TGFHIQYPLHS Trigger: TGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGCTCAGCAGACACAGGTCTGCCATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | GACTTTCACTGCACTCCAGCTGAACGAGTGAGTGAATaGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DFHCTPAERVSE*LASSTLACLQL Trigger: CAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTCACTCACTCGTTCAGCTGGAGTGCAGTGAAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | AATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTaGACAAAGAGGAAGCAGACATTCCCAGGCACACTC | + |
|
Preference number: 3 (lower is better) Translates to: NGWLLPPLLVSS*TKRKQTFPGTL Trigger: GAGTGTGCCTGGGAATGTCTGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | TGCTCTCGTTCACGTGTTTGCCAGCACCGATGCTTCTaGCACTGTCCTGGAAGAAGGTGCTGCATGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: CSRSRVCQHRCF*HCPGRRCCMEI Trigger: GATTTCCATGCAGCACCTTCTTCCAGGACAGTGTCAGAAGCATCGGTGCTGGCAAACACGTGAACGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | ACCATTCCTGCACTACTCGGCTCTGGGGTCGAGTGCTaGGAGCAGTTATCAACCCTGACTATAAAGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TIPALLGSGVEC*EQLSTLTIKAL Trigger: CAGTGCCTTTATAGTCAGGGTTGATAACTGCTCTCAGCACTCGACCCCAGAGCCGAGTAGTGCAGGAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CCA 72 bp | ACAAAGAGCAGCAACTACATCCACATGATGAAGGCATaGGGACGGGGTGGCAGCTGCCTTGATTGTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TKSSNYIHMMKA*GRGGSCLDCPF Trigger: AAAGGGACAATCAAGGCAGCTGCCACCCCGTCCCCATGCCTTCATCATGTGGATGTAGTTGCTGCTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | ACGTGTTTGCCAGCACCGATGCTTCTGACACTGTCCTaGAAGAAGGTGCTGCATGGAAATCCCAAATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCLPAPMLLTLS*KKVLHGNPKCS Trigger: GCTGCATTTGGGATTTCCATGCAGCACCTTCTTCCAGGACAGTGTCAGAAGCATCGGTGCTGGCAAACACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCATCTAGCTGGAACACATaGTATACACTGCCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EWLASSTLACLQLNKEEASSWNT*YTLPGP Trigger: TGGCCCTGGCAGTGTATACAATGTGTTCCAGCTAGA...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR GCA 72 bp | GAAGGCTGCCAGCCTTCTGCGTTTCCCAAGTTTCTCTaGAGGGCACATTTACGTCAAACCCTTCATGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EGCQPSAFPKFL*RAHLRQTLHGF Trigger: GAAACCATGAAGGGTTTGACGTAAATGTGCCCTGCAGAGAAACTTGGGAAACGCAGAAGGCTGGCAGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CCA 72 bp | GAGAGTTCCAGGCTCTGCCCCCTCTATCTGTCCATGTaGTTAACAATGTGCTGGTCACTAAGAGCCCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ESSRLCPLYLSM*LTMCWSLRALN Trigger: ATTGAGGGCTCTTAGTGACCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCAGAGCCTGGAACTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGTGGCAGCTGCCTTGATTGTCCCTTTAAGAAAAGGGTTAGGCTGAGCCACCAGTCAATCCCAGGGTaGTATAATTGCAAAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: RGGSCLDCPFKKRVRLSHQSIPG*YNCKGT Trigger: TGTTCCTTTGCAATTATACAACCCTGGGATTGACTG...GTGGCTCAGCCTAACCCTTTTCTTAAAGGGACAATCAAGGCAGCTGCCACCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | ATTCTGAGATGCTCATCAGGTAGACGTATCTGTAGGTaGGAGCTGACCTCACATCACTTCAGGGAGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ILRCSSGRRICR*ELTSHHFRERD Trigger: GTCCCTCTCCCTGAAGTGATGTGAGGTCAGCTCTCACCTACAGATACGTCTACCTGATGAGCATCTCAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | TCTTCACAAGATGACAGTGCTCTGGCTGTGAACCAATaGGGGCAAAGACATGATGCAGGCTCTGCTCTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSQDDSALAVNQ*GQRHDAGSALV Trigger: AACGAGAGCAGAGCCTGCATCATGTCTTTGCCCTCATTGGTTCACAGCCAGAGCACTGTCATCTTGTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | CTTGAACTCACGATAGTCTTGGCTCAGCCTCTGGAGTaGTGGGATTACAGTATTGCCACCACATGCAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: LELTIVLAQPLE*WDYSIATTCRF Trigger: GAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CCA 72 bp | GAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAACATaGTGCCCTATGCTGCTGGCACTGAAGGAAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: EGKKQFHESWKT*CPMLLALKEGW Trigger: CCATCCTTCCTTCAGTGCCAGCAGCATAGGGCACCATGTTTTCCAAGACTCATGAAACTGCTTCTTGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAATCCACCTTCAGGCTCTACCCCACCTTACTAAGGGTCTCGCATATCCTGAGGCCCCTCACTAAGTaGTCAGAATACAACCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: LESTFRLYPTLLRVSHILRPLTK*SEYNHN Trigger: ATTATGGTTGTATTCTGACAACTTAGTGAGGGGCCT...CAGGATATGCGAGACCCTTAGTAAGGTGGGGTAGAGCCTGAAGGTGGATTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCTCTTACTACGTGATTCATGTGCAATCTGTCTCACCTACTGGAATCAAGGAACTCACGATAGTCTaGGCTCAGCCTCTGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HSSYYVIHVQSVSPTGIKELTIV*AQPLEC Trigger: GCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTC...CTTGATTCCAGTAGGTGAGACAGATTGCACATGAATCACGTAGTAAGAGCTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | ACACTTGATCTTCACAAGATGACAGTGCTCTGGCTGTaGACCAATGAGGGCAAAGACATGATGCAGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLDLHKMTVLWL*TNEGKDMMQAL Trigger: CAGAGCCTGCATCATGTCTTTGCCCTCATTGGTTCACAGCCAGAGCACTGTCATCTTGTGAAGATCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | GCTCACACCAGCTGTTGGAACAGAGCTGAGTGTCTTTaGTCCAGAAAGCATGGTACCTCGTCAACATTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AHTSCWNRAECL*SRKHGTSSTFD Trigger: ATCAAATGTTGACGAGGTACCATGCTTTCTGGAGCAAAGACACTCAGCTCTGTTCCAACAGCTGGTGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CCA 72 bp | TGCCCCCTCTATCTGTCCATGTGGTTAACAATGTGCTaGTCACTAAGAGCCCTCAATATGGAAAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPLYLSMWLTMC*SLRALNMESKG Trigger: GCCTTTGCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CCA 72 bp | GAACTCACGATAGTCTTGGCTCAGCCTCTGGAGTGCTaGGATTACAGTATTGCCACCACATGCAGATTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ELTIVLAQPLEC*DYSIATTCRFN Trigger: ATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCAGTCAATCCCAGGGTaGTATAATTGCAAAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: FHYSLWEKAAWHRRGKKEQSIPG*YNCKGT Trigger: TGTTCCTTTGCAATTATACAACCCTGGGATTGACTG...CTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTTCTTCTAGCACTCACTaGCCAACTGCCCAAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IDTKWVSGGGEQALYKKCSSSTH*PTAQIS Trigger: GGAAATTTGGGCAGTTGGCAAGTGAGTGCTAGAAGA...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | AAGCACTCAGCATGCAAACACTTGATCTTCACAAGATaGCAGTGCTCTGGCTGTGAACCAATGAGGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KHSACKHLIFTR*QCSGCEPMRAK Trigger: CTTTGCCCTCATTGGTTCACAGCCAGAGCACTGTCATCTTGTGAAGATCAAGTGTTTGCATGCTGAGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | CCTTGTCCCATGCACCCTTGTCTTCTAGCACTCACTTaGCAACTGCCCAAATTTCCTGTACTTCTATTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PCPMHPCLLALT*QLPKFPVLLFH Trigger: GTGAAATAGAAGTACAGGAAATTTGGGCAGTTGGCAAGTGAGTGCTAGAAGACAAGGGTGCATGGGACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | CTTGGCTCAGCCTCTGGAGTGCTGGGATTACAGTATTaGCACCACATGCAGATTCAATTATTCATTCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: LGSASGVLGLQY*HHMQIQLFIHS Trigger: CGAGTGAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR TCA 72 bp | CTTCCTTTTCAGAGAAGCACTCAGCATGCAAACACTTaGTCTTCACAAGATGACAGTGCTCTGGCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPFQRSTQHANT*SSQDDSALAVN Trigger: GTTCACAGCCAGAGCACTGTCATCTTGTGAAGATCAAGTGTTTGCATGCTGAGTGCTTCTCTGAAAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGAGCTCTATGACAAAGAAAGCCAAAATCCAGATAGCTGTTTTCTTACGGTTGTCCCATGCACCCTaGTCTTCTAGCACTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TQSSMTKKAKIQIAVFLRLSHAP*SSSTHL Trigger: CAAGTGAGTGCTAGAAGACAAGGGTGCATGGGACAA...CCGTAAGAAAACAGCTATCTGGATTTTGGCTTTCTTTGTCATAGAGCTCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | TTCAGAAATGTAGGCCTTTGTGTGGAAATGAGGACCTaGAAACAGGGATACAAAGAGCAGCAACTACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: FRNVGLCVEMRT*KQGYKEQQLHP Trigger: TGGATGTAGTTGCTGCTCTTTGTATCCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR GCA 72 bp | AACGTAAAAGTTAAAAACAAGACACTAGAGAGTCTCTaGATCCTACAGGTGAACTGCGAACAGCAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NVKVKNKTLESL*ILQVNCEQQEQ Trigger: CTGCTCCTGCTGTTCGCAGTTCACCTGTAGGATGCAGAGACTCTCTAGTGTCTTGTTTTTAACTTTTACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR TCA 72 bp | CTCTTTGATCCATCTCTCTTCACAGCTCTTACTACGTaGTTCATGTGCAATCTGTCTCACCTACTGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LFDPSLFTALTT*FMCNLSHLLES Trigger: TGATTCCAGTAGGTGAGACAGATTGCACATGAATCACGTAGTAAGAGCTGTGAAGAGAGATGGATCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR GCA 72 bp | GTGTGTTTGTTTGTTTGTTTGTTTGAGATAGTGTTTTaGTTTATAGTCCAGGCTGGCCTCATTATGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: VCLFVCLFEIVF*FIVQAGLIMHP Trigger: GGGGTGCATAATGAGGCCAGCCTGGACTATAAAGCAAAACACTATCTCAAACAAACAAACAAACAAACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CCA 72 bp | AAAATGATGTCATCACATAGACACCAAGTGGGTAAGTaGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KMMSSHRHQVGK*RRRAGTLQKVL Trigger: TAACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTATGTGATGACATCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGATTACAGTATTGCCACCACATGCAGATTCAATTATTCATTCACTCGTTGATTTCATCATCGTTTaGTTTTCTTGGGTGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGITVLPPHADSIIHSLVDFIIV*FSWVCL Trigger: CAAACACACCCAAGAAAACAAAACGATGATGAAATC...AACGAGTGAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCAGGAATGCAGTCCTGAGCAGGCCCAGCACGCCCTAGCCCTCAGTCATAGAGAACCGCTACCGTaGCCACCATCTGGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WAQECSPEQAQHALALSHREPLP*PPSGQV Trigger: GACTTGGCCAGATGGTGGCCACGGTAGCGGTTCTCT...ATGACTGAGGGCTAGGGCGTGCTGGGCCTGCTCAGGACTGCATTCCTGGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCAGAGAACCGCTACCGTaGCCACCATCTGGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCREPLP*PPSGQV Trigger: GACTTGGCCAGATGGTGGCCACGGTAGCGGTTCTCT...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCTTACTGGCCTCTGACTaGTTGCTCAGCTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCLLASD*LLSCSS Trigger: GGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAA...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCATCACACAGGAGAGGGTaGACTGCAGCAGGAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EWLASSTLACLQLNKEEASHRRG*TAAGTG Trigger: CCCTGTTCCTGCTGCAGTTCACCCTCTCCTGTGTGA...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
||
| CDS-3UTR CCA 90 bp | AGGGATACAAAGAGCAGCAACTACATCCACATGATGAAGGCATGGGGACGGGGTAGGCCAAGTCAGAGCTaGCAGCTACGAAGGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RDTKSSNYIHMMKAWGRGRPSQS*QLRRLR Trigger: TCGGAGCCTTCGTAGCTGCCAGCTCTGACTTGGCCT...ACCCCGTCCCCATGCCTTCATCATGTGGATGTAGTTGCTGCTCTTTGTATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCTAGCAATCATGCTGGCCCAAGCAAGCCCCTCCAAAGCCAGCGATGCCACGTATGCACCATTTaGTGCTGTCAGGACATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SFPSNHAGPSKPLQSQRCHVCTI*CCQDII Trigger: AATGATGTCCTGACAGCAGCAAATGGTGCATACGTG...GCATCGCTGGCTTTGGAGGGGCTTGCTTGGGCCAGCATGATTGCTAGGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCACAGGAGAGGGTGAACTaGAGCAGGAACAGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EWLASSTLACLQLNKEEAQERVN*SRNRVS Trigger: TGACACCCTGTTCCTGCTGCAGTTCACCCTCTCCTG...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
||
| CDS-3UTR CCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCAGGCCAAGTCAGAGCTaGCAGCTACGAAGGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IIACGRKQHGTDVGRKSIRPSQS*QLRRLR Trigger: TCGGAGCCTTCGTAGCTGCCAGCTCTGACTTGGCCT...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | AAAGACATGATGCAGGCTCTGCTCTCGTTCACGTGTTaGCCAGCACCGATGCTTCTGACACTGTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDMMQALLSFTC*PAPMLLTLSWK Trigger: CTTCCAGGACAGTGTCAGAAGCATCGGTGCTGGCAAACACGTGAACGAGAGCAGAGCCTGCATCATGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCAGCCCTCAAACTCCATTaGCTTTTGTGCATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEADIPRHTLLTPQSRKAALKLH*LLCISC Trigger: ACAGGAGATGCACAAAAGGCAATGGAGTTTGAGGGC...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
||
| CDS-3UTR GCA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCATTACTGGCCTCTGACTaGTTGCTCAGCTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWLASSTLACLQLNKEEALLASD*LLSCSS Trigger: GGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAA...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCCCTCATCTCTGTGTGTaGAGGATTTCGCGGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIACGRKQHGTDVGRKSIPHLCV*RISRGL Trigger: AAGCCCCCGCGAAATCCTCCACACACAGAGATGAGG...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCACTACGAAGGCTCCGATaGTCATTGCAAATACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEADIPRHTLLTPQSRKALRRLR*SLQIQS Trigger: TGACTGTATTTGCAATGATCATCGGAGCCTTCGTAG...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTTTCTCCTCAAAGCTTAGAACCCACTTTTGTGTCTGCCCAGGTTACTCTAGGCCAAGTCAGAGCTaGCAGCTACGAAGGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: STFSSKLRTHFCVCPGYSRPSQS*QLRRLR Trigger: TCGGAGCCTTCGTAGCTGCCAGCTCTGACTTGGCCT...AGAGTAACCTGGGCAGACACAAAAGTGGGTTCTAAGCTTTGAGGAGAAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR TCA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCTTTGTGCATCTCCTGTaGAATACGCAATGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIACGRKQHGTDVGRKSIFVHLL*NTQWPG Trigger: CCCTGGCCATTGCGTATTTCACAGGAGATGCACAAA...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | CAATCAGTTCAGAAATGTAGGCCTTTGTGTGGAAATGAGGACCTGCAAACAGGGCTTGTTACTGGCCTCTaGCTGCTTGCTCAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVQKCRPLCGNEDLQTGLVTGL*LLAQLL Trigger: GAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAACAAG...CCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | TACACTGCCAGGGCCACCCAGATAGCAAGCTATAGAGTAAAGGATTTCAAAACAAGAGAACCGCTACCGTaGCCACCATCTGGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTARATQIASYRVKDFKTREPLP*PPSGQV Trigger: GACTTGGCCAGATGGTGGCCACGGTAGCGGTTCTCT...TGTTTTGAAATCCTTTACTCTATAGCTTGCTATCTGGGTGGCCCTGGCAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | CAGTCAATCCCAGGGTTGTATAATTGCAAAGGAACATaGACTCCCCGCAATCAGGAGGCTCCAGTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSIPGLYNCKGT*TPRNQEAPVSS Trigger: GGAAGACACTGGAGCCTCCTGATTGCGGGGAGTCAATGTTCCTTTGCAATTATACAACCCTGGGATTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | CACTCACACAGGCTCTCTCAGAATGAGGAAAGGAGATATATCCATTCTGAGATGCTTGTTACTGGCCTCTaGCTGCTTGCTCAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSHRLSQNEERRYIHSEMLVTGL*LLAQLL Trigger: GAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAACAAG...CATCTCAGAATGGATATATCTCCTTTCCTCATTCTGAGAGAGCCTGTGTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | CTATATGTAAAGCAGACCGTGAGCAAGCAGAGAGCATaGTGGAAAGCACTTATGTGCACACTGCCAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYVKQTVSKQRA*WKALMCTLPTG Trigger: TCCCGTTGGCAGTGTGCACATAAGTGCTTTCCACAATGCTCTCTGCTTGCTCACGGTCTGCTTTACATATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CAA 72 bp | TACATAGCACAGGCTGGACTTGAACTCACGATAGTCTaGGCTCAGCCTCTGGAGTGCTGGGATTACAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YIAQAGLELTIV*AQPLECWDYSI Trigger: AATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGACTATCGTGAGTTCAAGTCCAGCCTGTGCTATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | CGGGGTGGCAGCTGCCTTGATTGTCCCTTTAAGAAAAGGGTTAGGCTGAGCCACGGCTCCGATGATCATTaGAAATACAGTCATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGSCLDCPFKKRVRLSHGSDDH*KYSHLN Trigger: ATTAAGATGACTGTATTTGCAATGATCATCGGAGCC...GTGGCTCAGCCTAACCCTTTTCTTAAAGGGACAATCAAGGCAGCTGCCACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTCAGGGCTTTTAGTGCCAAAGCTGCCACCTTTGGCAAATGTGATACTGACTGCTTGCTCAGCTaGTCTTCCGTGAAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLRAFSAKAATFGKCDTDCLLS*SSVKVM Trigger: CATCACTTTCACGGAAGAGCAGCTGAGCAAGCAGTC...AGTATCACATTTGCCAAAGGTGGCAGCTTTGGCACTAAAAGCCCTGAGAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGTGCTGGTCACTAAGAGCCCTCAATATGGAAAGCAAAGGCCAGACCTATGTCCAGCTTGTTACTaGCCTCTGACTGCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NNVLVTKSPQYGKQRPDLCPACY*PLTACS Trigger: TGAGCAAGCAGTCAGAGGCCAGTAACAAGCTGGACA...TAGGTCTGGCCTTTGCTTTCCATATTGAGGGCTCTTAGTGACCAGCACATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | TACACTGCCAGGGCCACCCAGATAGCAAGCTATAGAGTAAAGGATTTCAAAACATTTGTGCATCTCCTGTaGAATACGCAATGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTARATQIASYRVKDFKTFVHLL*NTQWPG Trigger: CCCTGGCCATTGCGTATTTCACAGGAGATGCACAAA...TGTTTTGAAATCCTTTACTCTATAGCTTGCTATCTGGGTGGCCCTGGCAGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | TTCCATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGGTATGCACCATTTGCTaGTGTCAGGACATCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHYSLWEKAAWHRRGKKEVCTIC*CQDIID Trigger: ATCAATGATGTCCTGACAGCAGCAAATGGTGCATAC...CTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATCTTCTGTTTCACGTATaGACCATTTGCTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCALGSIFSIHCTHSQYLLFHV*TICCCQ Trigger: CTGACAGCAGCAAATGGTGCATACGTGAAACAGAAG...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTCTACGAAGGCTCCGATaGTCATTGCAAATACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IDTKWVSGGGEQALYKKCLRRLR*SLQIQS Trigger: TGACTGTATTTGCAATGATCATCGGAGCCTTCGTAG...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | CAATCAGTTCAGAAATGTAGGCCTTTGTGTGGAAATGAGGACCTGCAAACAGGGCACGTATGCACCATTTaGTGCTGTCAGGACATCATT | + |
|
Preference number: 4 (lower is better) Translates to: QSVQKCRPLCGNEDLQTGHVCTI*CCQDII Trigger: AATGATGTCCTGACAGCAGCAAATGGTGCATACGTG...CCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTCTTCTGTTTCACGTATaGACCATTTGCTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDTKWVSGGGEQALYKKCLLFHV*TICCCQ Trigger: CTGACAGCAGCAAATGGTGCATACGTGAAACAGAAG...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CAA 72 bp | CTTCCCTCACACCAATCAGTTCAGAAATGTAGGCCTTaGTGTGGAAATGAGGACCTGCAAACAGGGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSHQSVQKCRP*CGNEDLQTGIQ Trigger: TTGTATCCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTGGTGTGAGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | TCTTGGCTCAGCCTCTGGAGTGCTGGGATTACAGTATaGCCACCACATGCAGATTCAATTATTCATTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLSLWSAGITV*PPHADSIIHSL Trigger: GAGTGAATGAATAATTGAATCTGCATGTGGTGGCAATACTGTAATCCCAGCACTCCAGAGGCTGAGCCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | TACACTGCCAGGGCCACCCAGATAGCAAGCTATAGAGTAAAGGATTTCAAAACACTTCTGTTTCACGTATaGACCATTTGCTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTARATQIASYRVKDFKTLLFHV*TICCCQ Trigger: CTGACAGCAGCAAATGGTGCATACGTGAAACAGAAG...TGTTTTGAAATCCTTTACTCTATAGCTTGCTATCTGGGTGGCCCTGGCAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATTTTCCATTCAGTCTAGAGCAGGACCATTACCAATGGATCTCTGTATTCTGTCCAGCTTGTTACTaGCCTCTGACTGCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHFPFSLEQDHYQWISVFCPACY*PLTACS Trigger: TGAGCAAGCAGTCAGAGGCCAGTAACAAGCTGGACA...GAATACAGAGATCCATTGGTAATGGTCCTGCTCTAGACTGAATGGAAAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | GCGACTTTCCCCAGCTGTAGTTTTTATCATGCCTCTTaGATCCATCTCTCTTCACAGCTCTTACTACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATFPSCSFYHAS*IHLSSQLLLRD Trigger: ATCACGTAGTAAGAGCTGTGAAGAGAGATGGATCAAAGAGGCATGATAAAAACTACAGCTGGGGAAAGTCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTTGCCTAAGCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAACTACGAAGGCTCCGATaGTCATTGCAAATACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPKHLKARSSFMSLGKLRRLR*SLQIQS Trigger: TGACTGTATTTGCAATGATCATCGGAGCCTTCGTAG...TTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGCTTAGGCAACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAAAGACCAAGTTCCAATAATGGAAAGATGCCCACCTAGCTCTTCCCTCAGAGCAGAGTTATATTaGGTACAGAGTACTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRKDQVPIMERCPPSSSLRAELY*VQSTVA Trigger: TGCTACAGTACTCTGTACTCAATATAACTCTGCTCT...GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGGAACTTGGTCTTTTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
||
| CDS-3UTR GCA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATGGCTCCGATGATCATTaGAAATACAGTCATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALCALGSIFSIHCTHSQYGSDDH*KYSHLN Trigger: ATTAAGATGACTGTATTTGCAATGATCATCGGAGCC...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACACCAAGTGGGTAAGTGGAGGAGGAGAGCAGGCACTTTACAAAAAGTGTGGCTCCGATGATCATTaGAAATACAGTCATCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IDTKWVSGGGEQALYKKCGSDDH*KYSHLN Trigger: ATTAAGATGACTGTATTTGCAATGATCATCGGAGCC...ACACTTTTTGTAAAGTGCCTGCTCTCCTCCTCCACTTACCCACTTGGTGTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | AGTCTGTTGCCTAAGCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAAGTATGCACCATTTGCTaGTGTCAGGACATCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPKHLKARSSFMSLGKVCTIC*CQDIID Trigger: ATCAATGATGTCCTGACAGCAGCAAATGGTGCATAC...TTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGCTTAGGCAACAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| 3UTR CAA 72 bp | TCAATAAATTTCCAAAGGCAGCAGTCAATCCCAGGGTaGTATAATTGCAAAGGAACATTGACTCCCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SINFQRQQSIPG*YNCKGTLTPRN Trigger: ATTGCGGGGAGTCAATGTTCCTTTGCAATTATACAACCCTGGGATTGACTGCTGCCTTTGGAAATTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR CCA 90 bp | CACTCACACAGGCTCTCTCAGAATGAGGAAAGGAGATATATCCATTCTGAGATGAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSHRLSQNEERRYIHSEMNSPVI*FPKYSR Trigger: TCTACTATATTTTGGGAACCAAATCACGGGACTGTT...CATCTCAGAATGGATATATCTCCTTTCCTCATTCTGAGAGAGCCTGTGTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR TCA 90 bp | TATCTATCTATCTATTTATTTAGGCAGACTCTCATATGTCTCAGGCTGGTTTCATTTCCCCACCATCCTTaGGCATCCAATGAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSIYLFRQTLICLRLVSFPHHP*ASNEEA Trigger: AGCTTCTTCATTGGATGCTCAAGGATGGTGGGGAAA...TGAAACCAGCCTGAGACATATGAGAGTCTGCCTAAATAAATAGATAGATAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTTGCCTAAGCATCTGAAGGCAAGAAGCAGTTTCATGAGTCTTGGAAAAAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPKHLKARSSFMSLGKNSPVI*FPKYSR Trigger: TCTACTATATTTTGGGAACCAAATCACGGGACTGTT...TTTTCCAAGACTCATGAAACTGCTTCTTGCCTTCAGATGCTTAGGCAACAGACT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS-3UTR GCA 90 bp | TATCTATCTATCTATTTATTTAGGCAGACTCTCATATGTCTCAGGCTGGTTTCACACGTATGCACCATTTaGTGCTGTCAGGACATCATT | + |
|
Preference number: 4 (lower is better) Translates to: YLSIYLFRQTLICLRLVSHVCTI*CCQDII Trigger: AATGATGTCCTGACAGCAGCAAATGGTGCATACGTG...TGAAACCAGCCTGAGACATATGAGAGTCTGCCTAAATAAATAGATAGATAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| 3UTR CAA 72 bp | CCTGTACTTCTATTTCACATCAGGCCCCTCACTAAGTaGTCAGAATACAACCATAATCATGAAGACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLFHIRPLTK*SEYNHNHEDIV Trigger: AACAATGTCTTCATGATTATGGTTGTATTCTGACAACTTAGTGAGGGGCCTGATGTGAAATAGAAGTACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR GCA 90 bp | TATCTATCTATCTATTTATTTAGGCAGACTCTCATATGTCTCAGGCTGGTTTCAGAAGAAGCTGTAGTGTaGTACTTACTTTTGAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: YLSIYLFRQTLICLRLVSEEAVV*YLLLNL Trigger: TAGATTCAAAAGTAAGTAGCACACTACAGCTTCTTC...TGAAACCAGCCTGAGACATATGAGAGTCTGCCTAAATAAATAGATAGATAGATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCATTGGTGAGCACGCTCTaGTTGACCACCACGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEADIPRHTLLTPQSRKALVSTL*LTTTMR Trigger: CCTCATCGTGGTGGTCAACAAGAGCGTGCTCACCAA...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
||
| CDS GCA 90 bp | GTAGCATACATCAAGATGAACCCCATCACACAGGAGAGGGTGAACTaGAGCAGGAACAGGGTGTCAGCCCAGCCCTCAAACTCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAYIKMNPITQERVN*SRNRVSAQPSNSIA Trigger: GGCAATGGAGTTTGAGGGCTGGGCTGACACCCTGTTCCTGCTGCAGTTCACCCTCTCCTGTGTGATGGGGTTCATCTTGATGTATGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS-3UTR CAA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATCTGGCCTCTGACTGCTaGCTCAGCTGCTCTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: ALCALGSIFSIHCTHSQYLASDC*LSCSSV Trigger: CACGGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAG...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCATCACGTATGCACCATTaGCTGCTGTCAGGACATCAT | + |
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Preference number: 5 (lower is better) Translates to: EEADIPRHTLLTPQSRKASRMHH*LLSGHH Trigger: ATGATGTCCTGACAGCAGCAAATGGTGCATACGTGA...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | CCAAGAAAAGACCAAGTTCCAATAATGGAAAGATGCCCACCTAGCTCTTCCCTCCCCTTCGTGTCCAGCTaGTTACTGGCCTCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: PRKDQVPIMERCPPSSSLPFVSS*LLASDC Trigger: GCAGTCAGAGGCCAGTAACAAGCTGGACACGAAGGG...GAGGGAAGAGCTAGGTGGGCATCTTTCCATTATTGGAACTTGGTCTTTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS TCA 90 bp | TCACACTGCTCCTTTTCCCTTCGTGTCCAGCTTGTTACTGGCCTCTaGCTGCTTGCTCAGCTGCTCTTCCGTGAAAGTGATGTAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SHCSFSLRVQLVTGL*LLAQLLFRESDVRV Trigger: TACTCTTACATCACTTTCACGGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAACAAGCTGGACACGAAGGGAAAAGGAGCAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | CAATCAGTTCAGAAATGTAGGCCTTTGTGTGGAAATGAGGACCTGCAAACAGGGTTGGTGAGCACGCTCTaGTTGACCACCACGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: QSVQKCRPLCGNEDLQTGLVSTL*LTTTMR Trigger: CCTCATCGTGGTGGTCAACAAGAGCGTGCTCACCAA...CCCTGTTTGCAGGTCCTCATTTCCACACAAAGGCCTACATTTCTGAACTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCATCGAAGTCAGGAAACTaGACTACTCTGAGTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: EEADIPRHTLLTPQSRKASKSGN*TTLSVF Trigger: AAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGA...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | TACACTGCCAGGGCCACCCAGATAGCAAGCTATAGAGTAAAGGATTTCAAAACAGTGAGCACGCTCTTGTaGACCACCACGATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: YTARATQIASYRVKDFKTVSTLL*TTTMRK Trigger: CTTCCTCATCGTGGTGGTCAACAAGAGCGTGCTCAC...TGTTTTGAAATCCTTTACTCTATAGCTTGCTATCTGGGTGGCCCTGGCAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | ATTATAGCCTGTGGGAGAAAGCAGCATGGCACAGACGTGGGAAGAAAGAGCATCTCACGTATGCACCATTaGCTGCTGTCAGGACATCAT | + |
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Preference number: 5 (lower is better) Translates to: IIACGRKQHGTDVGRKSISRMHH*LLSGHH Trigger: ATGATGTCCTGACAGCAGCAAATGGTGCATACGTGA...GATGCTCTTTCTTCCCACGTCTGTGCCATGCTGCTTTCTCCCACAGGCTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGCAGACATTCCCAGGCACACTCTGCTCACCCCACAGTCTAGGAAAGCAAAACTCCATTGCCTTTaGTGCATCTCCTGTGAAATA | + |
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Preference number: 5 (lower is better) Translates to: EEADIPRHTLLTPQSRKAKLHCL*CISCEI Trigger: TATTTCACAGGAGATGCACAAAAGGCAATGGAGTTT...TGCTTTCCTAGACTGTGGGGTGAGCAGAGTGTGCCTGGGAATGTCTGCTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS-3UTR CAA 90 bp | GCGCTGTGTGCACTGGGTTCCATATTCAGTATCCACTGCACTCATTCTCAGTATAGCCCTCAAACTCCATaGCCTTTTGTGCATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALCALGSIFSIHCTHSQYSPQTP*PFVHLL Trigger: CAGGAGATGCACAAAAGGCAATGGAGTTTGAGGGCT...ATACTGAGAATGAGTGCAGTGGATACTGAATATGGAACCCAGTGCACACAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS-3UTR CAA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCATCGAAGTCAGGAAACTaGACTACTCTGAGTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: EWLASSTLACLQLNKEEASKSGN*TTLSVF Trigger: AAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGA...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | TTCCATTTTCCATTCAGTCTAGAGCAGGACCATTACCAATGGATCTCTGTATTCCCCTTCGTGTCCAGCTaGTTACTGGCCTCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: FHFPFSLEQDHYQWISVFPFVSS*LLASDC Trigger: GCAGTCAGAGGCCAGTAACAAGCTGGACACGAAGGG...GAATACAGAGATCCATTGGTAATGGTCCTGCTCTAGACTGAATGGAAAATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS GCA 90 bp | AAAGGCCAAGTCAGAGCTGGCAGCTACGAAGGCTCCGATGATCATTaGAAATACAGTCATCTTAATACCCCAGGAGAAAGTCTTCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: KGQVRAGSYEGSDDH*KYSHLNTPGESLLE Trigger: CTCAAGAAGACTTTCTCCTGGGGTATTAAGATGACTGTATTTGCAATGATCATCGGAGCCTTCGTAGCTGCCAGCTCTGACTTGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 ENSMUST00000183432.6 |
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| CDS-3UTR CAA 90 bp | AGAGAAAACTCCAGAGGCCTGTGTCTCCATCTCAGCTTAACTCAGACTGGAGCATCGAAGTCAGGAAACTaGACTACTCTGAGTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RENSRGLCLHLSLTQTGASKSGN*TTLSVF Trigger: AAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGA...TGCTCCAGTCTGAGTTAAGCTGAGATGGAGACACAGGCCTCTGGAGTTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| CDS-3UTR CAA 90 bp | GTTTCCCCATTCACTCAGATGAGCCTTATAAAGCGACTTTCCCCAGCTGTAGTTTCACGTATGCACCATTaGCTGCTGTCAGGACATCAT | + |
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Preference number: 5 (lower is better) Translates to: VSPFTQMSLIKRLSPAVVSRMHH*LLSGHH Trigger: ATGATGTCCTGACAGCAGCAAATGGTGCATACGTGA...AACTACAGCTGGGGAAAGTCGCTTTATAAGGCTCATCTGAGTGAATGGGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| CDS-3UTR CAA 90 bp | GAATGGCTGGCTTCTTCCACCCTTGCTTGTCTCCAGCTGAACAAAGAGGAAGCAAAGAGCAGAGTTATATaGAGTACAGAGTACTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: EWLASSTLACLQLNKEEAKSRVI*STEYCS Trigger: GCTACAGTACTCTGTACTCAATATAACTCTGCTCTT...TGCTTCCTCTTTGTTCAGCTGGAGACAAGCAAGGGTGGAAGAAGCCAGCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS-3UTR CAA 90 bp | ACCTCCCACATATTTCTGATACAAGATCACAGAAAACTTAACAAATGTCCTTCTCTGGCCTCTGACTGCTaGCTCAGCTGCTCTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: TSHIFLIQDHRKLNKCPSLASDC*LSCSSV Trigger: CACGGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAG...AGAAGGACATTTGTTAAGTTTTCTGTGATCTTGTATCAGAAATATGTGGGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | ACCTCCCACATATTTCTGATACAAGATCACAGAAAACTTAACAAATGTCCTTCTGTGAGCACGCTCTTGTaGACCACCACGATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSHIFLIQDHRKLNKCPSVSTLL*TTTMRK Trigger: CTTCCTCATCGTGGTGGTCAACAAGAGCGTGCTCAC...AGAAGGACATTTGTTAAGTTTTCTGTGATCTTGTATCAGAAATATGTGGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGTCCAAACTGCTCTTTCCACTTTTAAACAAGGATAAGAAACTGCTACTAGTGAGCACGCTCTTGTaGACCACCACGATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CKSKLLFPLLNKDKKLLLVSTLL*TTTMRK Trigger: CTTCCTCATCGTGGTGGTCAACAAGAGCGTGCTCAC...TAGTAGCAGTTTCTTATCCTTGTTTAAAAGTGGAAAGAGCAGTTTGGACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| CDS TCA 90 bp | TTCTTAATGCAGCCAACTATCGTTGTGGTAAGAGCAGAGTTATATTaGGTACAGAGTACTGTAGCATACATCAAGATGAACCCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: FLMQPTIVVVRAELY*VQSTVAYIKMNPIT Trigger: TGTGATGGGGTTCATCTTGATGTATGCTACAGTACTCTGTACTCAATATAACTCTGCTCTTACCACAACGATAGTTGGCTGCATTAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS TCA 72 bp | TCCTTTTCCCTTCGTGTCCAGCTTGTTACTGGCCTCTaGCTGCTTGCTCAGCTGCTCTTCCGTGAAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SFSLRVQLVTGL*LLAQLLFRESD Trigger: ATCACTTTCACGGAAGAGCAGCTGAGCAAGCAGTCAGAGGCCAGTAACAAGCTGGACACGAAGGGAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 |
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| CDS CAA 90 bp | AGTGGAAACGTCTTTCGAGGTACATTTCTGTCGAAGTCAGGAAACTaGACTACTCTGAGTGTCTTTCCCACCCAGAGAACCGCTACCGTG | + |
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Preference number: 6 (lower is better) Translates to: SGNVFRGTFLSKSGN*TTLSVFPTQRTATV Trigger: CACGGTAGCGGTTCTCTGGGTGGGAAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGACAGAAATGTACCTCGAAAGACGTTTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 ENSMUST00000183432.6 |
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| CDS GCA 72 bp | GTCAGAGCTGGCAGCTACGAAGGCTCCGATGATCATTaGAAATACAGTCATCTTAATACCCCAGGAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VRAGSYEGSDDH*KYSHLNTPGES Trigger: ACTTTCTCCTGGGGTATTAAGATGACTGTATTTGCAATGATCATCGGAGCCTTCGTAGCTGCCAGCTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 ENSMUST00000183432.6 |
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| CDS CAA 72 bp | GTCTTTCGAGGTACATTTCTGTCGAAGTCAGGAAACTaGACTACTCTGAGTGTCTTTCCCACCCAGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: VFRGTFLSKSGN*TTLSVFPTQRT Trigger: GGTTCTCTGGGTGGGAAAGACACTCAGAGTAGTCAAGTTTCCTGACTTCGACAGAAATGTACCTCGAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 ENSMUST00000183432.6 |
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| CDS CCA 72 bp | AGGTTCAGTTTCTTTGTGCTGAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGAGGTAGTGGAAACGTC | + |
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Preference number: 6 (lower is better) Translates to: RFSFFVLNSPVI*FPKYSRGSGNV Trigger: GACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCACGGGACTGTTCAGCACAAAGAAACTGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036195.13 ENSMUST00000150285.8 ENSMUST00000183432.6 |
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| CDS TCA 72 bp | TATTCCACACTTTCCCCACCATCCTTGAGCATCCAATaGAGAAGCTGTAGTGTGCTACTTACTTTTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: YSTLSPPSLSIQ*RSCSVLLTFES Trigger: AGATTCAAAAGTAAGTAGCACACTACAGCTTCTTCATTGGATGCTCAAGGATGGTGGGGAAAGTGTGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183432.6 |
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| CDS CAA 90 bp | ATTCTTAATGCAGCCAACTATCGTTGTGGTAAGAGCAGAGTTATATaGAGTACAGAGTACTGTAGCATACATCAAGATGAACCCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ILNAANYRCGKSRVI*STEYCSIHQDEPHH Trigger: GTGATGGGGTTCATCTTGATGTATGCTACAGTACTCTGTACTCAATATAACTCTGCTCTTACCACAACGATAGTTGGCTGCATTAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS TCA 72 bp | CAGCCAACTATCGTTGTGGTAAGAGCAGAGTTATATTaGGTACAGAGTACTGTAGCATACATCAAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: QPTIVVVRAELY*VQSTVAYIKMN Trigger: GTTCATCTTGATGTATGCTACAGTACTCTGTACTCAATATAACTCTGCTCTTACCACAACGATAGTTGGCTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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| CDS CAA 72 bp | GCAGCCAACTATCGTTGTGGTAAGAGCAGAGTTATATaGAGTACAGAGTACTGTAGCATACATCAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: AANYRCGKSRVI*STEYCSIHQDE Trigger: TTCATCTTGATGTATGCTACAGTACTCTGTACTCAATATAACTCTGCTCTTACCACAACGATAGTTGGCTGC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036195.13 |
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