Pregenerated sensors for SLC35C2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017664Ensembl transcript IDs: ENSMUST00000017808.14, ENSMUST00000109298.8, ENSMUST00000109299.8, ENSMUST00000109300.9, ENSMUST00000129210.8, ENSMUST00000129336.8, ENSMUST00000130393.2, ENSMUST00000131409.2, ENSMUST00000132270.8, ENSMUST00000133961.8, ENSMUST00000145301.8, ENSMUST00000155289.8, ENSMUST00000156134.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTaGAGCGGCTCTGAGAAACCGGCTGGGCTGCTGGACCTGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SRRLRVLAGSSEATT*SGSEKPAGLLDLAK Trigger: CTTGGCCAGGTCCAGCAGCCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CCA 90 bp | GCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTGGGCTGGTCACTGTTGTCCCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: AAGPGQDLPAGMTTE*PALLLLGWSLLSLG Trigger: ACCCAGGGACAACAGTGACCAGCCCAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR GCA 90 bp | TGTCCCTGGGTCACAAAATATTCCTCTTCCCCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGCAGTTCCAGGTCAGCGCTGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CPWVTKYSSSPSSSS*WLLRSSSSRSALEP Trigger: GGGCTCCAGCGCTGACCTGGAACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGGGGAAGAGGAATATTTTGTGACCCAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR CCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATaGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: HSFISCGGSMVWPQG*GLGHKQEHGLQKAE Trigger: CTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR TCA 90 bp | GGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTaGGCCTGGCATTCGCTTTTTGGGACCAAGCTCCACAGGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GDRPLAPFTDSSGPM*AWHSLFGTKLHREE Trigger: CTCTTCCCTGTGGAGCTTGGTCCCAAAAAGCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR TCA 90 bp | TCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTaGCAGCTCAGGTCCTATGTGAGCCTGGCATTCGCTTTTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SEPEQWWRQATGSLH*QLRSYVSLAFAFWD Trigger: GTCCCAAAAAGCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CCA 90 bp | CCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTaGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PQSESERLPHLSRSP*LSEPEQWWRQATGS Trigger: GGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR TCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGAACTGGCTCCCTTCACTaGCAGCTCAGGTCCTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGTGSLH*QLRSYV Trigger: CACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGT...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RAGGSESLQEALRPPLAAGMTTE*PALLLL Trigger: CAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCC...CGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCATCTGCCAGCAGGGATaGCCACAGAGTGGCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KSRRLRVLAGSSEATTCSICQQG*PQSGLL Trigger: AAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGAT...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SLQEALRPPLAAALRNRLGMTTE*PALLLL Trigger: CAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCC...CAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGTGGAATGTAGAGCCTTaGGGGCCACATGCAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLQEALRPPLAAALRNRLWNVEP*GPHAGR Trigger: TCTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCA...CAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGCCTGGTGGAGACAGGCCACTaGCTCCCTTCACTGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HSFISCGGSMVWPQGWGLVETGH*LPSLTA Trigger: AGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCAC...CAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGCTTTTTGGGACCAAGCTCCACAGGGAAGAGCCGGAGGCTCAGAGTCCTTGGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FAFWDQAPQGRAGGSESLGMTTE*PALLLL Trigger: CAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCC...CAAGGACTCTGAGCCTCCGGCTCTTCCCTGTGGAGCTTGGTCCCAAAAAGCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCGTGGAGACAGGCCACTaGCTCCCTTCACTGACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RSPWLSEPEQWWRQATGSVETGH*LPSLTA Trigger: AGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCAC...GGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGACTCTCACGTTCACCTTaGCTCTCAGAACCAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGLSRSP*LSEPEQ Trigger: TTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAG...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCGTGTGGCCCCAAGGATaGGGCCTGGGGCACAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: HLSRSPWLSEPEQWWRQAVWPQG*GLGHKQ Trigger: CTGTTTGTGCCCCAGGCCCCATCCTTGGGGCCACAC...GGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CAA 90 bp | CCTTCACTGACAGCTCAGGTCCTATGTGAGCCTGGCATTCGCTTTTaGGGACCAAGCTCCACAGGGAAGAGCCGGAGGCTCAGAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PSLTAQVLCEPGIRF*GPSSTGKSRRLRVL Trigger: AAGGACTCTGAGCCTCCGGCTCTTCCCTGTGGAGCTTGGTCCCAAAAAGCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAACACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ANTHLFPAVGPWCGPKDGGMTTE*PALLLL Trigger: CAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCC...CCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTGTTTGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCAGGACCAGGGCTGCACGCAGTTCCTCCAGCTTGAAGATGAGAGAGAAAGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TTRTRAARSSSSLKMREKGMTTE*PALLLL Trigger: CAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCC...TTTCTCTCTCATCTTCAAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTGAGCCTGGCATTCGCTGCCTTAGGCAACACTaGGCTGTGGAGAGGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: GHWLPSLTAQVLCEPGIRCLRQH*AVERKS Trigger: TGATTTCCTCTCCACAGCCCAGTGTTGCCTAAGGCA...GCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CAA 90 bp | GTCAATGGGATTCTGGAGGCCAAGATCGGCTTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGATGCCACCGATGAACGAAGCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VNGILEAKIGFLQEY*CKGPADATDERSPQ Trigger: CTGGGGGCTTCGTTCATCGGTGGCATCCGCTGGACCCTTACACAAATACTCCTGCAGAAAGCCGATCTTGGCCTCCAGAATCCCATTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAAGATCGGCTTTCTGCAGGAGTATTTGTGTAAGGGTCCAGCGGATGCCAATCTGCCAGCAGGGATaGCCACAGAGTGGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RPRSAFCRSICVRVQRMPICQQG*PQSGLL Trigger: AAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGAT...TGGCATCCGCTGGACCCTTACACAAATACTCCTGCAGAAAGCCGATCTTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATGTGTGGCCCCAAGGATaGGGCCTGGGGCACAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LHDSFPDTPQSESERLPHVWPQG*GLGHKQ Trigger: CTGTTTGTGCCCCAGGCCCCATCCTTGGGGCCACAC...ATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCAGATCTTCTCAGAGGTaGACAAGTGGAGACCTTCGA | + |
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Preference number: 2 (lower is better) Translates to: KSRRLRVLAGSSEATTCSRSSQR*TSGDLR Trigger: TCGAAGGTCTCCACTTGTCCACCTCTGAGAAGATCT...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCGTTCCAGGTCAGCGCTaGAGCCCAGGCTCTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: INLLSEEAAVQVMRPSLSVPGQR*SPGSSG Trigger: CCCTGAAGAGCCTGGGCTCCAGCGCTGACCTGGAAC...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGATCTGCCAGCAGGGATaGCCACAGAGTGGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NLLSEEAAVQVMRPSLSMICQQG*PQSGLL Trigger: AAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGAT...CATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTATTTGTGTAAGGGTCCAGCGGATGCCACCGATGAACGAAGCCCCCAGCTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RSICVRVQRMPPMNEAPSCTGTQ*CRGSSS Trigger: ACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACA...GCTGGGGGCTTCGTTCATCGGTGGCATCCGCTGGACCCTTACACAAATACTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATCTGCCAGCAGGGATaGCCACAGAGTGGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: INLLSEEAAVQVMRPSLSICQQG*PQSGLL Trigger: AAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGAT...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CAA 90 bp | ATGAGCAGGACCACCAGGACCAGGGCTGCACGCAGTTCCTCCAGCTaGAAGATGAGAGAGAAAATCAGGATAAAGAGCACAGCAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: MSRTTRTRAARSSSS*KMREKIRIKSTAED Trigger: ATCCTCTGCTGTGCTCTTTATCCTGATTTTCTCTCTCATCTTCAAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTGGTCCTGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCTGCCTTAGGCAACACTaGGCTGTGGAGAGGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: HLSRSPWLSEPEQWWRQACLRQH*AVERKS Trigger: TGATTTCCTCTCCACAGCCCAGTGTTGCCTAAGGCA...GGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | CTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGACTCTCTCACGTTCACCTTaGCTCTCAGAACCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: LLSEEAAVQVMRPSLSMTLSRSP*LSEPEQ Trigger: TTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAG...AGTCATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGTGCAGACTTCCTTAAAGATGCCAGCGATGGAGAGTGTGAGGCTTGACGGAACATGGTGTCAATaGGATTCTGGAGGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRVQTSLKMPAMESVRLDGTWCQ*DSGGQD Trigger: ATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC...GTCAAGCCTCACACTCTCCATCGCTGGCATCTTTAAGGAAGTCTGCACCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCCTCTCACGTTCACCTTaGCTCTCAGAACCAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: INLLSEEAAVQVMRPSLSLSRSP*LSEPEQ Trigger: TTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAG...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCATGCCTTAGGCAACACTaGGCTGTGGAGAGGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: FPDTPQSESERLPHLSRSCLRQH*AVERKS Trigger: TGATTTCCTCTCCACAGCCCAGTGTTGCCTAAGGCA...TGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR GCA 72 bp | CCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGGCTaGTGGACCTGGCCAAGATCTGCCAGCAGGGATGAC | + |
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Preference number: 3 (lower is better) Translates to: PPLAAALRNRLG*WTWPRSASRDD Trigger: GTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CAA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGAGGAGGCTCAGAGTCCTaGCAGGAAGCTCTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGGGSES*QEALRP Trigger: TGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCC...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR GCA 72 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTaGAGCGGCTCTGAGAAACCGGCTGGGCTGCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: LRVLAGSSEATT*SGSEKPAGLLD Trigger: GTCCAGCAGCCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGAGGCTCAGAGTCCTaGCAGGAAGCTCTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: KSRRLRVLAGSSEATTCSGGSES*QEALRP Trigger: TGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCC...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CCA 72 bp | CCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTaGCCTGCTTTGCTGCTCCTGGGCTGGTCACTGTTG | + |
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Preference number: 3 (lower is better) Translates to: PGQDLPAGMTTE*PALLLLGWSLL Trigger: CAACAGTGACCAGCCCAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| 3UTR GCA 72 bp | CCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTaGTTTGCTGCTCCTGGGCTGGTCACTGTTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSASRDDHRVA*FAAPGLVTVVP Trigger: AGGGACAACAGTGACCAGCCCAGGAGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTGAGCCTGGCATTCGCCTGGGCTGGTCACTGTaGTCCCTGGGTCACAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GHWLPSLTAQVLCEPGIRLGWSL*SLGHKI Trigger: TATTTTGTGACCCAGGGACAACAGTGACCAGCCCAG...GCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| 3UTR TCA 72 bp | CCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTaGGCCTGGCATTCGCTTTTTGGGACCAAGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLAPFTDSSGPM*AWHSLFGTKLH Trigger: GTGGAGCTTGGTCCCAAAAAGCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| 3UTR GCA 72 bp | GTCACAAAATATTCCTCTTCCCCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGCAGTTCCAGGTCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: VTKYSSSPSSSS*WLLRSSSSRSA Trigger: CGCTGACCTGGAACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGGGGAAGAGGAATATTTTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCTGCAGGAGTATTTGTGTAAGGGTCCAGCGGATGCCACCGATGAACGAAGGAGGCTCAGAGTCCTaGCAGGAAGCTCTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AFCRSICVRVQRMPPMNEGGSES*QEALRP Trigger: TGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCC...TTCGTTCATCGGTGGCATCCGCTGGACCCTTACACAAATACTCCTGCAGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATGGAGGCTCAGAGTCCTaGCAGGAAGCTCTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LHDSFPDTPQSESERLPHGGSES*QEALRP Trigger: TGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCC...ATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCTCTCTCACGTTCACCTaGGCTCTCAGAACCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: INLLSEEAAVQVMRPSLSSLTFT*ALRTRT Trigger: TGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGA...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACATGGTGTCAATGGGATTCTGGAGGCCAAGATCGGCTTTCTGCAGGAGTACGCAGTTCCTCCAGCTaGAAGATGAGAGAGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GTWCQWDSGGQDRLSAGVRSSSS*KMREKI Trigger: GATTTTCTCTCTCATCTTCAAGCTGGAGGAACTGCG...TACTCCTGCAGAAAGCCGATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGACCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGPSSSS*WLLRSS Trigger: GCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGG...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGGATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGTTCCAGGTCAGCGCTaGAGCCCAGGCTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRMGPGAQTGAWATEGGAVPGQR*SPGSSG Trigger: CCCTGAAGAGCCTGGGCTCCAGCGCTGACCTGGAAC...CGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGAGTTCCAGGTCAGCGCTaGAGCCCAGGCTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGVPGQR*SPGSSG Trigger: CCCTGAAGAGCCTGGGCTCCAGCGCTGACCTGGAAC...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGGATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGCACGTCAAGTGCTGTTaGCAGTGCTGTGGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRMGPGAQTGAWATEGGAHVKCC*QCCGGH Trigger: GTGGCCCCCACAGCACTGGCAACAGCACTTGACGTG...CGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGCCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSESLQEALRPPLAAPSSSS*WLLRSS Trigger: GCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGG...CGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCAGCGGATGCCACCGATaGACGAAGCCCCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRRLRVLAGSSEATTCSSGCHR*TKPPAP Trigger: TGGTGCTGGGGGCTTCGTTCATCGGTGGCATCCGCT...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGGGCCCAGGGTCAGAGCTaGCTTCCACACAAAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSSEATTCSGSEKPAGAQGQS*LPHKGD Trigger: GTCGCCTTTGTGTGGAAGGCAGCTCTGACCCTGGGC...CCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGCAGGCCCACGTCAAGTaGTGTTGCCAGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSESLQEALRPPLAAQAHVK*CCQCCG Trigger: CCCACAGCACTGGCAACAGCACTTGACGTGGGCCTG...CGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGACCACATGCAGGGAGATaGCAGAGAGGCAGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGPHAGR*QRGRGQ Trigger: TTGCCCTCTGCCTCTCTGGCATCTCCCTGCATGTGG...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCCACAGGGAAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAPQGRAGGSESLQEALRPSSSS*WLLRSS Trigger: GCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGG...CCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTTCCCTGTGGAGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| 3UTR CAA 72 bp | CAAGCTCCACAGGGAAGAGCCGGAGGCTCAGAGTCCTaGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAPQGRAGGSES*QEALRPPLAAA Trigger: AGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTTCCCTGTGGAGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR TCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGCCTGAGCGGATGCCACCGATaGACGAAGCCCCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HSFISCGGSMVWPQGWGLSGCHR*TKPPAP Trigger: TGGTGCTGGGGGCTTCGTTCATCGGTGGCATCCGCT...CAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGCCCAGGGTCAGAGCTaGCTTCCACACAAAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALRPPLAAALRNRLAQGQS*LPHKGD Trigger: GTCGCCTTTGTGTGGAAGGCAGCTCTGACCCTGGGC...CAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGCAGGCCCACGTCAAGTaGTGTTGCCAGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALRPPLAAALRNRLQAHVK*CCQCCG Trigger: CCCACAGCACTGGCAACAGCACTTGACGTGGGCCTG...CAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCCACCAGGACCAGGGCTaGACGCAGTTCCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRRLRVLAGSSEATTCSHQDQG*TQFLQL Trigger: AAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTG...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGGCCACATGCAGGGAGATaGCAGAGAGGCAGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGSSEATTCSGSEKPAGPHAGR*QRGRGQ Trigger: TTGCCCTCTGCCTCTCTGGCATCTCCCTGCATGTGG...CCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTTCCTCTTCCTCCTGCTaGCTACTCCGGAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAAGPGQDLPAGMTTEWPSSSSC*LLRSSS Trigger: ACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGA...AGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTTGGAATGTAGAGCCTTaGGGGCCACATGCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAAGPGQDLPAGMTTEWPWNVEP*GPHAGR Trigger: TCTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCA...AGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | ACCGGCTGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTTGTGGCTGGAGCATTaGACCAGTGCCCTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGWAAGPGQDLPAGMTTELWLEH*TSALCQ Trigger: CTGACAAAGGGCACTGGTTCAATGCTCCAGCCACAA...CTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | ACCGGCTGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGWAAGPGQDLPAGMTTEKMTAR*SMVMKS Trigger: GCTCTTCATGACCATGCTGCACCTGGCCGTCATCTT...CTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGCCTGCACGTCAAGTGCTGTTaGCAGTGCTGTGGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSFISCGGSMVWPQGWGLHVKCC*QCCGGH Trigger: GTGGCCCCCACAGCACTGGCAACAGCACTTGACGTG...CAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACCCGTCCTCTTCCTCCTaGTGGCTACTCCGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWLSEPEQWWRQATGSLHPSSSS*WLLRSS Trigger: GCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGACGG...GTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | GCGGCTCTGAGAAACCGGCTGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGTGTCAATGGGATTCTaGAGGCCAAGATCGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AALRNRLGCWTWPRSASRVSMGF*RPRSAF Trigger: GAAAGCCGATCTTGGCCTCCAGAATCCCATTGACAC...CCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGTTTCTCAGAGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGAGGAAGCAGCCCTGTGTCCTaGAAGCGGAAGATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGAWGTNRSMGYRRRSGGSSPVS*KRKIFS Trigger: TGAGAAGATCTTCCGCTTCCAGGACACAGGGCTGCT...TCCTCCGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | GGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTGAGCCTGGCATTCGCTCCTCTTCCTCCTGCTaGCTACTCCGGAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHWLPSLTAQVLCEPGIRSSSSC*LLRSSS Trigger: ACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGA...GCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCAGCGGATGCCACCGATaGACGAAGCCCCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWLSEPEQWWRQATGSGCHR*TKPPAP Trigger: TGGTGCTGGGGGCTTCGTTCATCGGTGGCATCCGCT...GCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACAGGCCCACGTCAAGTaGTGTTGCCAGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAGSSEATTCSGSEKQAHVK*CCQCCG Trigger: CCCACAGCACTGGCAACAGCACTTGACGTGGGCCTG...TTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACACCAGGACCAGGGCTaGACGCAGTTCCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAGSSEATTCSGSEKHQDQG*TQFLQL Trigger: AAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTG...TTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACGCCTTGAGGGCCACATaGAGGGAGATGCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWLSEPEQWWRQATGSLHALRAT*REMPER Trigger: CCTCTCTGGCATCTCCCTGCATGTGGCCCTCAAGGC...GTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCGCCTTGAGGGCCACATaGAGGGAGATGCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTMVETGHWLPSLTAQVALRAT*REMPER Trigger: CCTCTCTGGCATCTCCCTGCATGTGGCCCTCAAGGC...GACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGGATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGGTGTCAATGGGATTCTaGAGGCCAAGATCGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRMGPGAQTGAWATEGGAVSMGF*RPRSAF Trigger: GAAAGCCGATCTTGGCCTCCAGAATCCCATTGACAC...CGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTAGCAGCCCTGTGTCCTaGAAGCGGAAGATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAAGPGQDLPAGMTTEWPSSPVS*KRKIFS Trigger: TGAGAAGATCTTCCGCTTCCAGGACACAGGGCTGCT...AGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGCCTGTGGAATGTAGAGCCTTaGGGGCCACATGCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSFISCGGSMVWPQGWGLWNVEP*GPHAGR Trigger: TCTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCA...CAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CATCGTGTACAGGGACACAGTGATGTAGAGGAAGCTCCAGTTGGACAGGCCCACGCCCAGGGTCAGAGCTaGCTTCCACACAAAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRVQGHSDVEEAPVGQAHAQGQS*LPHKGD Trigger: GTCGCCTTTGTGTGGAAGGCAGCTCTGACCCTGGGC...GTGGGCCTGTCCAACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACACGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTGCTAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWPRSASRDDHRVACFAAKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...AGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGGGGTGTCAATGGGATTCTaGAGGCCAAGATCGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSSEATTCSGSEKPAGVSMGF*RPRSAF Trigger: GAAAGCCGATCTTGGCCTCCAGAATCCCATTGACAC...CCCAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGGATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGAGATCTTCTCAGAGGTaGACAAGTGGAGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRMGPGAQTGAWATEGGARSSQR*TSGDLR Trigger: TCGAAGGTCTCCACTTGTCCACCTCTGAGAAGATCT...CGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTCCTCTTCCTCCTGCTaGCTACTCCGGAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLSEPEQWWRQATGSLHSSSSC*LLRSSS Trigger: ACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGA...GTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAATGGAATGTAGAGCCTTaGGGGCCACATGCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAGSSEATTCSGSEKWNVEP*GPHAGR Trigger: TCTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCA...TTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | TTCGCTTTTTGGGACCAAGCTCCACAGGGAAGAGCCGGAGGCTCAGAGTCCTTGTGGAATGTAGAGCCTTaGGGGCCACATGCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FAFWDQAPQGRAGGSESLWNVEP*GPHAGR Trigger: TCTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCA...CAAGGACTCTGAGCCTCCGGCTCTTCCCTGTGGAGCTTGGTCCCAAAAAGCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRTMVETGHWLPSLTAQVKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...GACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGCACCAGGACCAGGGCTaGACGCAGTTCCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHVHLGSQNQNNGGDRPLHQDQG*TQFLQL Trigger: AAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTG...CAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGGCCTGAGCAGCCCTGTGTCCTaGAAGCGGAAGATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSFISCGGSMVWPQGWGLSSPVS*KRKIFS Trigger: TGAGAAGATCTTCCGCTTCCAGGACACAGGGCTGCT...CAGGCCCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | AATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGGTTCCAGGTCAGCGCTaGAGCCCAGGCTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLLSEEAAVQVMRPSLSMVPGQR*SPGSSG Trigger: CCCTGAAGAGCCTGGGCTCCAGCGCTGACCTGGAAC...CATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | CTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATAGCGGATGCCACCGATaGACGAAGCCCCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHDSFPDTPQSESERLPHSGCHR*TKPPAP Trigger: TGGTGCTGGGGGCTTCGTTCATCGGTGGCATCCGCT...ATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPWLSEPEQWWRQATGSKMTAR*SMVMKS Trigger: GCTCTTCATGACCATGCTGCACCTGGCCGTCATCTT...GGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAAAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAGSSEATTCSGSEKKMTAR*SMVMKS Trigger: GCTCTTCATGACCATGCTGCACCTGGCCGTCATCTT...TTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWLSEPEQWWRQATGKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...GCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | ATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCCACGTCAAGTGCTGTTaGCAGTGCTGTGGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPHSPNLRDYLISHVHLGHVKCC*QCCGGH Trigger: GTGGCCCCCACAGCACTGGCAACAGCACTTGACGTG...GCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | GTGATGAGGCCTAGTCTCTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCAGGCCCACGTCAAGTaGTGTTGCCAGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VMRPSLSMTPFLIPHSPNQAHVK*CCQCCG Trigger: CCCACAGCACTGGCAACAGCACTTGACGTGGGCCTG...ATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAGAGACTAGGCCTCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGCCAAGATCGGCTTTCTaGAGGAGTATTTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSESLQEALRPPLAAPRSAF*RSICVR Trigger: CCTTACACAAATACTCCTGCAGAAAGCCGATCTTGG...CGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTATGAAGAGCGGAAAGTaGAAGCTCTTTGTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAAGPGQDLPAGMTTEWPMKSGK*KLFVSH Trigger: ATGGCTGACAAAGAGCTTCCACTTTCCGCTCTTCAT...AGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACGTTCCAGGTCAGCGCTaGAGCCCAGGCTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNLRDYLISHVHLGSQNVPGQR*SPGSSG Trigger: CCCTGAAGAGCCTGGGCTCCAGCGCTGACCTGGAAC...GTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGTCCTCTTCCTCCTGCTaGCTACTCCGGAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHVHLGSQNQNNGGDRPLSSSSC*LLRSSS Trigger: ACTGCTGCTCCGGAGTAGCCAGCAGGAGGAAGAGGA...CAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSESLQEALRPPLAAICCRT*CLWRSS Trigger: ACTGCTTCTCCATAGGCATCACGTTCTACAACAAAT...CGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAAGPGQDLPAGMTTEWPICCRT*CLWRSS Trigger: ACTGCTTCTCCATAGGCATCACGTTCTACAACAAAT...AGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATGCCCAGGGTCAGAGCTaGCTTCCACACAAAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHDSFPDTPQSESERLPHAQGQS*LPHKGD Trigger: GTCGCCTTTGTGTGGAAGGCAGCTCTGACCCTGGGC...ATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCCACGTCAAGTGCTGTTaGCAGTGCTGTGGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMTPFLIPHSPNLRDYLIHVKCC*QCCGGH Trigger: GTGGCCCCCACAGCACTGGCAACAGCACTTGACGTG...GATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCCACCAGGACCAGGGCTaGACGCAGTTCCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: INLLSEEAAVQVMRPSLSHQDQG*TQFLQL Trigger: AAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTG...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAACCGGCTGCCAAGATCGGCTTTCTaGAGGAGTATTTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQEALRPPLAAALRNRLPRSAF*RSICVR Trigger: CCTTACACAAATACTCCTGCAGAAAGCCGATCTTGG...CAGCCGGTTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | GTGATGAGGCCTAGTCTCTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCCACATGCAGGGAGATaGCAGAGAGGCAGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMRPSLSMTPFLIPHSPNPHAGR*QRGRGQ Trigger: TTGCCCTCTGCCTCTCTGGCATCTCCCTGCATGTGG...ATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAGAGACTAGGCCTCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACGCCTTGAGGGCCACATaGAGGGAGATGCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNLRDYLISHVHLGSQNALRAT*REMPER Trigger: CCTCTCTGGCATCTCCCTGCATGTGGCCCTCAAGGC...GTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACCAGCCTTGAGGGCCACATaGAGGGAGATGCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SESERLPHLSRSPWLSEPALRAT*REMPER Trigger: CCTCTCTGGCATCTCCCTGCATGTGGCCCTCAAGGC...TGGTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTGGAACATGGTGTCAATaGGATTCTGGAGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WTWPRSASRDDHRVACFAGTWCQ*DSGGQD Trigger: ATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC...AGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | TGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTAGATCTTCTCAGAGGTaGACAAGTGGAGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WTWPRSASRDDHRVACFARSSQR*TSGDLR Trigger: TCGAAGGTCTCCACTTGTCCACCTCTGAGAAGATCT...AGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | GCAAACACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGAGCAGCCCTGTGTCCTaGAAGCGGAAGATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANTHLFPAVGPWCGPKDGSSPVS*KRKIFS Trigger: TGAGAAGATCTTCCGCTTCCAGGACACAGGGCTGCT...CCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | GCAAACACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANTHLFPAVGPWCGPKDGCTGTQ*CRGSSS Trigger: ACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACA...CCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | TCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWLSEPEQWWRQATGCTGTQ*CRGSSS Trigger: ACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACA...GCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCAGCCCAGGGTCAGAGCTaGCTTCCACACAAAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPDTPQSESERLPHLSRSAQGQS*LPHKGD Trigger: GTCGCCTTTGTGTGGAAGGCAGCTCTGACCCTGGGC...TGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | ATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHSPNLRDYLISHVHLGKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...GCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
||
| CDS-3UTR GCA 90 bp | GGAACATGGTGTCAATGGGATTCTGGAGGCCAAGATCGGCTTTCTGCAGGAGTAAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTWCQWDSGGQDRLSAGVKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...TACTCCTGCAGAAAGCCGATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACCCACATGCAGGGAGATaGCAGAGAGGCAGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPNLRDYLISHVHLGSQNPHAGR*QRGRGQ Trigger: TTGCCCTCTGCCTCTCTGGCATCTCCCTGCATGTGG...GTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCGGCTCTGAGAAAGGAACATGGTGTCAATaGGATTCTGGAGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVLAGSSEATTCSGSEKGTWCQ*DSGGQD Trigger: ATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC...TTTCTCAGAGCCGCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| 3UTR CAA 72 bp | ATTCTGGAGGCCAAGATCGGCTTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGATGCCACCGATGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: ILEAKIGFLQEY*CKGPADATDER Trigger: TCGTTCATCGGTGGCATCCGCTGGACCCTTACACAAATACTCCTGCAGAAAGCCGATCTTGGCCTCCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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| CDS-3UTR TCA 90 bp | CATCTCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSRSPWLSEPEQWWRQACTGTQ*CRGSSS Trigger: ACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACA...GGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR TCA 90 bp | AAGATCGGCTTTCTGCAGGAGTATTTGTGTAAGGGTCCAGCGGATGCCACCGATTTGTGGCTGGAGCATTaGACCAGTGCCCTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIGFLQEYLCKGPADATDLWLEH*TSALCQ Trigger: CTGACAAAGGGCACTGGTTCAATGCTCCAGCCACAA...ATCGGTGGCATCCGCTGGACCCTTACACAAATACTCCTGCAGAAAGCCGATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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| CDS-3UTR GCA 90 bp | TCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCAAGTGCTGTTGCCAGTaGTGTGGGGGCCACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMTPFLIPHSPNLRDYLIKCCCQ*CGGHSS Trigger: AGAAGAGTGGCCCCCACAGCACTGGCAACAGCACTT...GATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGAAGAGCGGAAAGTaGAAGCTCTTTGTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QNNGGDRPLAPFTDSSGPMKSGK*KLFVSH Trigger: ATGGCTGACAAAGAGCTTCCACTTTCCGCTCTTCAT...AGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | TCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCATTGAACCAGTGCCCTaGACAGGGCGGAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMTPFLIPHSPNLRDYLIIEPVP*TGRRRG Trigger: TCCTCTTCTCCGCCCTGTCCAGGGCACTGGTTCAAT...GATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | CATCTCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCGTGTCAATGGGATTCTaGAGGCCAAGATCGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSRSPWLSEPEQWWRQAVSMGF*RPRSAF Trigger: GAAAGCCGATCTTGGCCTCCAGAATCCCATTGACAC...GGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | TCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCGGAACATGGTGTCAATaGGATTCTGGAGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWLSEPEQWWRQATGGTWCQ*DSGGQD Trigger: ATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC...GCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRTMVETGHWLPSLTAQVICCRT*CLWRSS Trigger: ACTGCTTCTCCATAGGCATCACGTTCTACAACAAAT...GACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| CDS-3UTR TCA 90 bp | AATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLSEEAAVQVMRPSLSMCTGTQ*CRGSSS Trigger: ACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACA...CATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | TCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACCAAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SESERLPHLSRSPWLSEPKMTAR*SMVMKS Trigger: GCTCTTCATGACCATGCTGCACCTGGCCGTCATCTT...TGGTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR GCA 90 bp | GCAAACACTCATTTATTTCCTGCGGTGGGTCCATGGTGTGGCCCCAAGGATGGGCCAAGATCGGCTTTCTaGAGGAGTATTTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANTHLFPAVGPWCGPKDGPRSAF*RSICVR Trigger: CCTTACACAAATACTCCTGCAGAAAGCCGATCTTGG...CCCATCCTTGGGGCCACACCATGGACCCACCGCAGGAAATAAATGAGTGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | TCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGGAACATGGTGTCAATaGGATTCTGGAGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHVHLGSQNQNNGGDRPLGTWCQ*DSGGQD Trigger: ATCTTGGCCTCCAGAATCCCATTGACACCATGTTCC...CAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| 3UTR CAA 72 bp | ACCACCAGGACCAGGGCTGCACGCAGTTCCTCCAGCTaGAAGATGAGAGAGAAAATCAGGATAAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTRTRAARSSSS*KMREKIRIKST Trigger: TGTGCTCTTTATCCTGATTTTCTCTCTCATCTTCAAGCTGGAGGAACTGCGTGCAGCCCTGGTCCTGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132270.8 |
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| CDS-3UTR CCA 90 bp | GTGATGAGGCCTAGTCTCTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATAGATCTTCTCAGAGGTaGACAAGTGGAGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VMRPSLSMTPFLIPHSPNRSSQR*TSGDLR Trigger: TCGAAGGTCTCCACTTGTCCACCTCTGAGAAGATCT...ATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAGAGACTAGGCCTCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR GCA 90 bp | GTGATGAGGCCTAGTCTCTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCCAAGATCGGCTTTCTaGAGGAGTATTTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMRPSLSMTPFLIPHSPNPRSAF*RSICVR Trigger: CCTTACACAAATACTCCTGCAGAAAGCCGATCTTGG...ATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAGAGACTAGGCCTCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | ATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCATGAAGAGCGGAAAGTaGAAGCTCTTTGTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPHSPNLRDYLISHVHLGMKSGK*KLFVSH Trigger: ATGGCTGACAAAGAGCTTCCACTTTCCGCTCTTCAT...GCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | TCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACCAAGATCTTCTCAGAGGTaGACAAGTGGAGACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SESERLPHLSRSPWLSEPRSSQR*TSGDLR Trigger: TCGAAGGTCTCCACTTGTCCACCTCTGAGAAGATCT...TGGTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CCA 90 bp | ATAAATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGAAGAGCGGAAAGTaGAAGCTCTTTGTCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: INLLSEEAAVQVMRPSLSMKSGK*KLFVSH Trigger: ATGGCTGACAAAGAGCTTCCACTTTCCGCTCTTCAT...GGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR TCA 90 bp | AGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCACCTTGGCTCTCAGAACATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPNLRDYLISHVHLGSQNICCRT*CLWRSS Trigger: ACTGCTTCTCCATAGGCATCACGTTCTACAACAAAT...GTTCTGAGAGCCAAGGTGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000132270.8 |
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| 3UTR CAA 72 bp | CCCTCCACATTGAACTGCGTGGACAGTTCCTCCAGCTaGAAGATGAGAGAGAAAATCAGGATAAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSTLNCVDSSSS*KMREKIRIKST Trigger: TGTGCTCTTTATCCTGATTTTCTCTCTCATCTTCAAGCTGGAGGAACTGTCCACGCAGTTCAATGTGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145301.8 |
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| CDS-3UTR TCA 90 bp | GAAGATGAGAGAGAAAATCAGGATAAAGAGCACAGCAGAGGATTTGGTCATCGTATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDERENQDKEHSRGFGHRICCRT*CLWRSS Trigger: ACTGCTTCTCCATAGGCATCACGTTCTACAACAAAT...ACGATGACCAAATCCTCTGCTGTGCTCTTTATCCTGATTTTCTCTCTCATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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| CDS-3UTR CAA 90 bp | CCAAGGATGGGGCCTGGGGCACAAACAGGAGCATGGGCTACAGAAGGCGGAGCGCCACGTCAAGTGCTGTaGCCAGTGCTGTGGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRMGPGAQTGAWATEGGAPRQVL*PVLWGP Trigger: TGGCCCCCACAGCACTGGCAACAGCACTTGACGTGG...CGCTCCGCCTTCTGTAGCCCATGCTCCTGTTTGTGCCCCAGGCCCCATCCTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | CTGAGAAACCGGCTGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCCACGTCAAGTGCTGTaGCCAGTGCTGTGGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNRLGCWTWPRSASRDDPRQVL*PVLWGP Trigger: TGGCCCCCACAGCACTGGCAACAGCACTTGACGTGG...GTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGTTTCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | AAGAGCCGGAGGCTCAGAGTCCTTGCAGGAAGCTCTGAGGCCACCACTTGCAGCCCACGTCAAGTGCTGTaGCCAGTGCTGTGGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRRLRVLAGSSEATTCSPRQVL*PVLWGP Trigger: TGGCCCCCACAGCACTGGCAACAGCACTTGACGTGG...GCTGCAAGTGGTGGCCTCAGAGCTTCCTGCAAGGACTCTGAGCCTCCGGCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | TGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTAGGCTCTTCAGGGGCTaGGGGCCACCATCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WTWPRSASRDDHRVACFARLFRG*GPPSPL Trigger: CAGAGGTGATGGTGGCCCCAAGCCCCTGAAGAGCCT...AGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | CGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCCACGTCAAGTGCTGTaGCCAGTGCTGTGGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPWLSEPEQWWRQATGSPRQVL*PVLWGP Trigger: TGGCCCCCACAGCACTGGCAACAGCACTTGACGTGG...GGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | GGCCACTGGCTCCCTTCACTGACAGCTCAGGTCCTATGTGAGCCTGGCATTCGCCTGGAATGTAGAGCCTaGAGGGCCACATGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHWLPSLTAQVLCEPGIRLECRA*RATCRE Trigger: CTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCAG...GCGAATGCCAGGCTCACATAGGACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | ACCAGAACAATGGTGGAGACAGGCCACTGGCTCCCTTCACTGACAGCTCAGGTCAGGCTCTTCAGGGGCTaGGGGCCACCATCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRTMVETGHWLPSLTAQVRLFRG*GPPSPL Trigger: CAGAGGTGATGGTGGCCCCAAGCCCCTGAAGAGCCT...GACCTGAGCTGTCAGTGAAGGGAGCCAGTGGCCTGTCTCCACCATTGTTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | ACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTGCTCTGGAATGTAGAGCCTaGAGGGCCACATGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TWPRSASRDDHRVACFAALECRA*RATCRE Trigger: CTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCAG...AGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS GCA 90 bp | ACCAGTGCCCTGGACAGGGCGGAGAAGAGGAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGCGGAAAGTGGAAGCTCTTTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSALDRAEKRKMTAR*SMVMKSGKWKLFVS Trigger: GCTGACAAAGAGCTTCCACTTTCCGCTCTTCATGACCATGCTGCACCTGGCCGTCATCTTCCTCTTCTCCGCCCTGTCCAGGGCACTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000129210.8 ENSMUST00000129336.8 ENSMUST00000131409.2 ENSMUST00000133961.8 ENSMUST00000155289.8 ENSMUST00000156134.8 |
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| CDS-3UTR CAA 90 bp | ACCGGCTGGGCTGCTGGACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGWAAGPGQDLPAGMTTEFLQEY*CKGPAD Trigger: ATCCGCTGGACCCTTACACAAATACTCCTGCAGAAA...CTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGTCCAGCAGCCCAGCCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | AATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGAGGCTCTTCAGGGGCTaGGGGCCACCATCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLLSEEAAVQVMRPSLSMRLFRG*GPPSPL Trigger: CAGAGGTGATGGTGGCCCCAAGCCCCTGAAGAGCCT...CATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | CTCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATAGGCTCTTCAGGGGCTaGGGGCCACCATCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHDSFPDTPQSESERLPHRLFRG*GPPSPL Trigger: CAGAGGTGATGGTGGCCCCAAGCCCCTGAAGAGCCT...ATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CAA 90 bp | ACCTGGCCAAGATCTGCCAGCAGGGATGACCACAGAGTGGCCTGCTTTGCTGCTCGCAGTTCCTCCAGCTaGAAGATGAGAGAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TWPRSASRDDHRVACFAARSSSS*KMREKI Trigger: GATTTTCTCTCTCATCTTCAAGCTGGAGGAACTGCG...AGCAGCAAAGCAGGCCACTCTGTGGTCATCCCTGCTGGCAGATCTTGGCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS-3UTR CAA 90 bp | TCCATGACTCCTTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCCTGGAATGTAGAGCCTaGAGGGCCACATGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMTPFLIPHSPNLRDYLILECRA*RATCRE Trigger: CTCCCTGCATGTGGCCCTCAAGGCTCTACATTCCAG...GATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
||
| CDS TCA 90 bp | GGAGCATTGAACCAGTGCCCTTTGTCAGCCATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGTAGTATAGAAGGACCAGGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GALNQCPLSAICCRT*CLWRSSSIEGPGPG Trigger: CCCTGGGCCTGGTCCTTCTATACTACTGCTTCTCCATAGGCATCACGTTCTACAACAAATGGCTGACAAAGGGCACTGGTTCAATGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
||
| CDS-3UTR CAA 90 bp | CATCTCTCACGTTCACCTTGGCTCTCAGAACCAGAACAATGGTGGAGACAGGCCTTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HLSRSPWLSEPEQWWRQAFLQEY*CKGPAD Trigger: ATCCGCTGGACCCTTACACAAATACTCCTGCAGAAA...GGCCTGTCTCCACCATTGTTCTGGTTCTGAGAGCCAAGGTGAACGTGAGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS TCA 90 bp | AGAGCGGAAAGTGGAAGCTCTTTGTCAGCCATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGTAGTATAGAAGGACCAGGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAESGSSLSAICCRT*CLWRSSSIEGPGPG Trigger: CCCTGGGCCTGGTCCTTCTATACTACTGCTTCTCCATAGGCATCACGTTCTACAACAAATGGCTGACAAAGAGCTTCCACTTTCCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000129210.8 ENSMUST00000129336.8 ENSMUST00000130393.2 ENSMUST00000131409.2 ENSMUST00000133961.8 ENSMUST00000155289.8 ENSMUST00000156134.8 |
||
| CDS-3UTR CAA 90 bp | AATCTACTCTCTGAGGAAGCTGCAGTCCAGGTGATGAGGCCTAGTCTCTCCATGTTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: NLLSEEAAVQVMRPSLSMFLQEY*CKGPAD Trigger: ATCCGCTGGACCCTTACACAAATACTCCTGCAGAAA...CATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS-3UTR CAA 90 bp | TTTCCTGATACCCCACAGTCCGAATCTGAGAGACTACCTCATCTCTCACGTTCATTTCTGCAGGAGTATTaGTGTAAGGGTCCAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: FPDTPQSESERLPHLSRSFLQEY*CKGPAD Trigger: ATCCGCTGGACCCTTACACAAATACTCCTGCAGAAA...TGAACGTGAGAGATGAGGTAGTCTCTCAGATTCGGACTGTGGGGTATCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 |
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| CDS TCA 72 bp | AGGACCACCAGGACCAGGGCTGCACGAGGGACACAGTaGTGTAGAGGAAGCTCCAGTTGGACAGGCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: RTTRTRAARGTQ*CRGSSSWTGPR Trigger: ACGTGGGCCTGTCCAACTGGAGCTTCCTCTACATCACTGTGTCCCTCGTGCAGCCCTGGTCCTGGTGGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131409.2 |
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| CDS GCA 72 bp | CTGGACAGGGCGGAGAAGAGGAAGATGACGGCCAGGTaGAGCATGGTCATGAAGAGCGGAAAGTGGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LDRAEKRKMTAR*SMVMKSGKWKL Trigger: GAGCTTCCACTTTCCGCTCTTCATGACCATGCTGCACCTGGCCGTCATCTTCCTCTTCTCCGCCCTGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000129210.8 ENSMUST00000129336.8 ENSMUST00000131409.2 ENSMUST00000133961.8 ENSMUST00000155289.8 ENSMUST00000156134.8 |
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| CDS TCA 72 bp | AAGCCCTCCACATTGAACTGCGTGGAAGGGACACAGTaGTGTAGAGGAAGCTCCAGTTGGACAGGCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: KPSTLNCVEGTQ*CRGSSSWTGPR Trigger: ACGTGGGCCTGTCCAACTGGAGCTTCCTCTACATCACTGTGTCCCTTCCACGCAGTTCAATGTGGAGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129336.8 |
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| CDS TCA 72 bp | CAGCAGAGGATTTGGTCATCGTGTACAGGGACACAGTaGTGTAGAGGAAGCTCCAGTTGGACAGGCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: QQRIWSSCTGTQ*CRGSSSWTGPR Trigger: ACGTGGGCCTGTCCAACTGGAGCTTCCTCTACATCACTGTGTCCCTGTACACGATGACCAAATCCTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000017808.14 ENSMUST00000109298.8 ENSMUST00000109299.8 ENSMUST00000109300.9 ENSMUST00000129210.8 ENSMUST00000133961.8 ENSMUST00000155289.8 ENSMUST00000156134.8 |
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| CDS TCA 72 bp | AACCAGTGCCCTTTGTCAGCCATTTGTTGTAGAACGTaGTGCCTATGGAGAAGCAGTAGTATAGAAGGACCA | + |
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Preference number: 6 (lower is better) Translates to: NQCPLSAICCRT*CLWRSSSIEGP Trigger: TGGTCCTTCTATACTACTGCTTCTCCATAGGCATCACGTTCTACAACAAATGGCTGACAAAGGGCACTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132270.8 ENSMUST00000145301.8 |
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