Pregenerated sensors for SLC35B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018999Ensembl transcript IDs: ENSMUST00000019143.9, ENSMUST00000138250.2
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCCAGAACAGAAGAGGGCAGCCACAGGCAGCACCAACCACCCTaGCAGAGAACTGAGTGCTGGACTTTGGTCAGCTGGGCAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: PPRTEEGSHRQHQPP*QRTECWTLVSWAGR Trigger: TCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTGCCCTCTTCTGTTCTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | AGAAGAGGGCAGCCACAGGCAGCACCAACCACCCTGGCAGAGAACTaGGTGCTGGACTTTGGTCAGCTGGGCAGGAAGAAGGGGAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: RRGQPQAAPTTLAEN*VLDFGQLGRKKGKG Trigger: TCCTTTCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTGCCCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GAGGGCAGCCACAGGCAGCACCAACCACCCTGGCAGAGAACTGAGTaGTGGACTTTGGTCAGCTGGGCAGGAAGAAGGGGAAAGGATATG | + |
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Preference number: 1 (lower is better) Translates to: EGSHRQHQPPWQRTE*WTLVSWAGRRGKDM Trigger: CATATCCTTTCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | GGCAGCCACAGGCAGCACCAACCACCCTGGCAGAGAACTGAGTGCTaGACTTTGGTCAGCTGGGCAGGAAGAAGGGGAAAGGATATGCAG | + |
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Preference number: 1 (lower is better) Translates to: GSHRQHQPPWQRTEC*TLVSWAGRRGKDMQ Trigger: CTGCATATCCTTTCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | GAAGTGTGTGGCTGGGTTCACAGGGGCAACAGTCTCTCAGGGTGCTaGAAGAGTGAGCTGTATTGGGCCACACTTCCTTCTCCATCTCCG | + |
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Preference number: 1 (lower is better) Translates to: EVCGWVHRGNSLSGC*KSELYWATLPSPSP Trigger: CGGAGATGGAGAAGGAAGTGTGGCCCAATACAGCTCACTCTTTCAGCACCCTGAGAGACTGTTGCCCCTGTGAACCCAGCCACACACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | GCGAAGGTCAGTGCCGCAATACCTAGTAACCACCATGCAAAGGCCTaGAATCCATCCTTGTCACTCAAGCCGGTCTGGACAGTCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: AKVSAAIPSNHHAKA*NPSLSLKPVWTVTC Trigger: GCAGGTGACTGTCCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTGGTTACTAGGTATTGCGGCACTGACCTTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
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| 3UTR TCA 90 bp | TGGCTGGGTTCACAGGGGCAACAGTCTCTCAGGGTGCTGAAAGAGTaGGCTGTATTGGGCCACACTTCCTTCTCCATCTCCGTAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: WLGSQGQQSLRVLKE*AVLGHTSFSISVNR Trigger: CCTGTTTACGGAGATGGAGAAGGAAGTGTGGCCCAATACAGCTCACTCTTTCAGCACCCTGAGAGACTGTTGCCCCTGTGAACCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | TTCTGTCTACTGCACGGCAGGAAGCAGCTGGGGCACTTGCTAGCTTaGGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: FCLLHGRKQLGHLLA*ASRARTLICSYISF Trigger: GAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCCAGCTGCTTCCTGCCGTGCAGTAGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | TGTCATGCCACCTCCCAGGCACACCCAAAAGCAGTCCCATATCTATaGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGTTTGAGCACA | + |
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Preference number: 1 (lower is better) Translates to: CHATSQAHPKAVPYL*NKKTSPCRSWGLST Trigger: TGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGTGTGCCTGGGAGGTGGCATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | CTGTGCGAGAGAAACATTGTGTGTAGCTGTTTGCAGAGGAGCAGATaGCTAGGTGAGGGTAATGAGGGTCTGGCCCTAAGTGGGGACGAG | + |
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Preference number: 1 (lower is better) Translates to: LCERNIVCSCLQRSR*LGEGNEGLALSGDE Trigger: CTCGTCCCCACTTAGGGCCAGACCCTCATTACCCTCACCTAGCCATCTGCTCCTCTGCAAACAGCTACACACAATGTTTCTCTCGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | CTCTTTGCCTTCCCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTaGTGCTGCTGTTCAGACCCATCAAAGAGCATCTTCAGAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LFAFPGDPEDWDSSL*CCCSDPSKSIFRGC Trigger: GCACCCTCTGAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGAAGGCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | CCTCTTCCCTCTTCCCTACCACCACGCATCAAGAGAGCAAAAAGCTaGGTAGCATTCTCTGGACCTCTCCCAATAACTGCTCCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: PLPSSLPPRIKRAKS*VAFSGPLPITAPHS Trigger: AGAGTGGGGAGCAGTTATTGGGAGAGGTCCAGAGAATGCTACCCAGCTTTTTGCTCTCTTGATGCGTGGTGGTAGGGAAGAGGGAAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | GCCCAACTAGAAGGGACATGTAGCAGTGGTTCTCTGCTCCTGGGCTaGGCTGGACAAGAATACGCAGTCGGTTCAGATAAAGCTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: AQLEGTCSSGSLLLG*AGQEYAVGSDKASM Trigger: CATGGAAGCTTTATCTGAACCGACTGCGTATTCTTGTCCAGCTCAGCCCAGGAGCAGAGAACCACTGCTACATGTCCCTTCTAGTTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GCCTTCCCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTGCTGCTaGTGTTCAGACCCATCAAAGAGCATCTTCAGAGGGTGCAACAAA | + |
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Preference number: 1 (lower is better) Translates to: AFPGDPEDWDSSLCC*CSDPSKSIFRGCNK Trigger: TTTGTTGCACCCTCTGAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | TTTGCCTTCCCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTGCTaGTGCTGTTCAGACCCATCAAAGAGCATCTTCAGAGGGTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: FAFPGDPEDWDSSLC*CCSDPSKSIFRGCN Trigger: GTTGCACCCTCTGAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGAAGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | CACACTTCCTTCTCCATCTCCGTAAACAGGCCAAGGGGCTTCACGTaGGAGATGGAAGGAAAGGTCTCCCTCTTCTCGATCCACTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: HTSFSISVNRPRGFT*EMEGKVSLFSIHFQ Trigger: TTGAAAGTGGATCGAGAAGAGGGAGACCTTTCCTTCCATCTCCCACGTGAAGCCCCTTGGCCTGTTTACGGAGATGGAGAAGGAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | CAAATATGGGCGGTGTCTGGATGCAGACCAGGCCTTTTCTGCCTGTaGCTCTTTTGCTGCTTGCCTCATGGTGGTAATTTCCGTAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: QIWAVSGCRPGLFCL*LFCCLPHGGNFRRQ Trigger: TTGCCTACGGAAATTACCACCATGAGGCAAGCAGCAAAAGAGCCACAGGCAGAAAAGGCCTGGTCTGCATCCAGACACCGCCCATATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | CACCCAAAAGCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTaGCGCAGCTGGGGTTTGAGCACACTCACGCCTGTGTATCAATCA | + |
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Preference number: 1 (lower is better) Translates to: HPKAVPYLWNKKTSP*RSWGLSTLTPVYQS Trigger: TGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | CACGTCAGACACTTTGCCAGGAGCTGGCAGTTCAGAAATGAATTATaGATGCTCCCGGCCTCTTCCATTCCTGGAATGTCTACAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: HVRHFARSWQFRNEL*MLPASSIPGMSTVR Trigger: CCTCACTGTAGACATTCCAGGAATGGAAGAGGCCGGGAGCATGCATAATTCATTTCTGAACTGCCAGCTCCTGGCAAAGTGTCTGACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | TGGAGCCACTGGGCTGTTCCCTTCCTTGGCTGTAAGGAACCATTATaGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGT | + |
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Preference number: 1 (lower is better) Translates to: WSHWAVPFLGCKEPL*RGRKRPWQAFTFSC Trigger: ACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATGGTTCCTTACAGCCAAGGAAGGGAACAGCCCAGTGGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GAGAAGACCAAGATACACAGCTCTCCAGACAGCAGTAATACTGACTaGAGGGTGCTGGTCACCAAGCAGCCACTTCAAAAACCCTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: EKTKIHSSPDSSNTD*RVLVTKQPLQKPLG Trigger: TCCTAAGGGTTTTTGAAGTGGCTGCTTGGTGACCAGCACCCTGCAGTCAGTATTACTGCTGTCTGGAGAGCTGTGTATCTTGGTCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | TTCTATCTCAGGGATGCCTATGTGGAATCTACAAATGCAGACTCGTaGGAGCAGATGAGTCCCATCCTTTTGGAGGAAGCTCTGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: FYLRDAYVESTNADS*EQMSPILLEEALEP Trigger: AGGCTCCAGAGCTTCCTCCAAAAGGATGGGACTCATCTGCTCTCACGAGTCTGCATTTGTAGATTCCACATAGGCATCCCTGAGATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | GAGAACAGACCATTACCAGCACTGGGAAGCTGTCAATGGCCAGAATaGCAATCAGTCTGCAAACCTGGGGACTTAGGTGGAGAAACAGTA | + |
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Preference number: 1 (lower is better) Translates to: ENRPLPALGSCQWPE*QSVCKPGDLGGETV Trigger: TACTGTTTCTCCACCTAAGTCCCCAGGTTTGCAGACTGATTGTCATTCTGGCCATTGACAGCTTCCCAGTGCTGGTAATGGTCTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | ACGCAGTCGGTTCAGATAAAGCTTCCATGCAAGCTCTCTGCCGAGTaGTTCCCATACACTGCACTCTTACTAGCGATGCTTACAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: TQSVQIKLPCKLSAE*FPYTALLLAMLTET Trigger: TGTTTCTGTAAGCATCGCTAGTAAGAGTGCAGTGTATGGGAAGCACTCGGCAGAGAGCTTGCATGGAAGCTTTATCTGAACCGACTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GCCATTCTCTGGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAATTaGGAGCAAAGCACAAAGGCTTTCTTGTGTTGCTGGGGGATAACC | + |
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Preference number: 1 (lower is better) Translates to: AILWKESKQLGNARN*EQSTKAFLCCWGIT Trigger: GGTTATCCCCCAGCAACACAAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAGAGAATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | CATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGTTTaGGCACACTCACGCCTGTGTATCAATCAATCATCATCGATGACT | + |
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Preference number: 1 (lower is better) Translates to: HIYGTRRLHPAAAGV*AHSRLCINQSSSMT Trigger: AGTCATCGATGATGATTGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | AGAGCTTCTGGGACTGTGAATGGGTTCACATCTAATTCAGGTCTTTaGGAACAGACCATTACCAGCACTGGGAAGCTGTCAATGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RASGTVNGFTSNSGL*EQTITSTGKLSMAR Trigger: TCTGGCCATTGACAGCTTCCCAGTGCTGGTAATGGTCTGTTCTCAAAGACCTGAATTAGATGTGAACCCATTCACAGTCCCAGAAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GATAAAGCTTCCATGCAAGCTCTCTGCCGAGTGCTTCCCATACACTaGACTCTTACTAGCGATGCTTACAGAAACACTAGACAAGGCATT | + |
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Preference number: 1 (lower is better) Translates to: DKASMQALCRVLPIH*TLTSDAYRNTRQGI Trigger: AATGCCTTGTCTAGTGTTTCTGTAAGCATCGCTAGTAAGAGTGCAGTGTATGGGAAGCACTCGGCAGAGAGCTTGCATGGAAGCTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | CAATCTGGTGAGTTTCTTCCTGAACATCAACTGTACATGGTAATATaGACACAAGCCTCTTCCCTCTTCCCTACCACCACGCATCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QSGEFLPEHQLYMVI*TQASSLFPTTTHQE Trigger: CTCTTGATGCGTGGTGGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTCAGGAAGAAACTCACCAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | AAGTTAGCTTCAAAAAGGAAGCCTTCCACAGCAATAAATAAGAACTaGGCAAACGTGACGATGTTCCCGCATCCTGGATGTGTCTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: KLASKRKPSTAINKN*ANVTMFPHPGCVCV Trigger: CACGCAGACACATCCAGGATGCGGGAACATCGTCACGTTTGCGCAGTTCTTATTTATTGCTGTGGAAGGCTTCCTTTTTGAAGCTAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
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| 3UTR CCA 90 bp | TTCCTTGGCTGTAAGGAACCATTATGGAGAGGGAGGAAGAGGCCTTaGCAAGCATTTACTTTCTCATGTAACACACGTCAGACACTTTGC | + |
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Preference number: 1 (lower is better) Translates to: FLGCKEPLWRGRKRP*QAFTFSCNTRQTLC Trigger: GCAAAGTGTCTGACGTGTGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATGGTTCCTTACAGCCAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GTCTGCCTGGTAGCCTTGCTTGTTTTGTTTATTCTATCTCAGGGATaGCTATGTGGAATCTACAAATGCAGACTCGTGAGAGCAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: VCLVALLVLFILSQG*LCGIYKCRLVRADE Trigger: CTCATCTGCTCTCACGAGTCTGCATTTGTAGATTCCACATAGGCATCCCTGAGATAGAATAAACAAAACAAGCAAGGCTACCAGGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | TCTCCCTCTTCTCGATCCACTTTCAAGTTTTCTTCCTTTCTAATGTaGAATGAGCGCTGCAGGACTGCTCTAACTACAGAAAGCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: SPSSRSTFKFSSFLM*NERCRTALTTESNR Trigger: CCTGTTGCTTTCTGTAGTTAGAGCAGTCCTGCAGCGCTCATTGCACATTAGAAAGGAAGAAAACTTGAAAGTGGATCGAGAAGAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | AGTGCTGGACTTTGGTCAGCTGGGCAGGAAGAAGGGGAAAGGATATaGAGAACCAACCTCATAAAATCAACTGTAAGTCTACCTAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SAGLWSAGQEEGERI*RTNLIKSTVSLPSV Trigger: TACACTAGGTAGACTTACAGTTGATTTTATGAGGTTGGTTCTGCATATCCTTTCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CCA 90 bp | TGCTACTTTTCAAATCATCCTTCTTGGGAAGCTGAGGCCATTCTCTaGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAATTGCGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: CYFSNHPSWEAEAIL*KESKQLGNARNCEQ Trigger: TTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAGAGAATGGCCTCAGCTTCCCAAGAAGGATGATTTGAAAAGTAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | CCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGAGTGAGGTCTaGTATTTACACAGCTCAAAGTCTGAATGCTCACTAATGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: PSLTAQIAPMAGSEV*YLHSSKSECSLMSL Trigger: CAAAGACATTAGTGAGCATTCAGACTTTGAGCTGTGTAAATATCAGACCTCACTCCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | CTCTTCTCGATCCACTTTCAAGTTTTCTTCCTTTCTAATGTGCAATaGGCGCTGCAGGACTGCTCTAACTACAGAAAGCAACAGGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LFSIHFQVFFLSNVQ*ALQDCSNYRKQQVK Trigger: TTTCACCTGTTGCTTTCTGTAGTTAGAGCAGTCCTGCAGCGCTCATTGCACATTAGAAAGGAAGAAAACTTGAAAGTGGATCGAGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | GGCAACCCCACATATTTCAAAGTAGCTACAGAGCTTCTGGGACTGTaGATGGGTTCACATCTAATTCAGGTCTTTGAGAACAGACCATTA | + |
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Preference number: 1 (lower is better) Translates to: GNPTYFKVATELLGL*MGSHLIQVFENRPL Trigger: TAATGGTCTGTTCTCAAAGACCTGAATTAGATGTGAACCCATTCACAGTCCCAGAAGCTCTGTAGCTACTTTGAAATATGTGGGGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR GCA 90 bp | GTAATGAGCACATTTTCTCTATATTCTGTCAATGTCAGCTTCAAGTaGCACAGACAAGATGCAGTCAATAACTCTCAGCGGAAAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: VMSTFSLYSVNVSFK*HRQDAVNNSQRKAQ Trigger: TTGGGCTTTCCGCTGAGAGTTATTGACTGCATCTTGTCTGTGGCACTTGAAGCTGACATTGACAGAATATAGAGAAAATGTGCTCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | AGAAAACTAGAAGCTCTGAGACTTGGAATTCAACAAATATGGTTCTaGTGTTCTGGCAAAGAAATAGAAAAGCAAATGCAGAGGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: RKLEALRLGIQQIWF*CSGKEIEKQMQRLP Trigger: GGGCAGCCTCTGCATTTGCTTTTCTATTTCTTTGCCAGAACATCAGAACCATATTTGTTGAATTCCAAGTCTCAGAGCTTCTAGTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR TCA 90 bp | ACATGTCTTAAGCTCTATTTTGAGACAAACGATATGCTCTGTCTCTaGACAAAGGTGTTTAATAGGCAGTTCTCTACATTCCATGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: TCLKLYFETNDMLCL*TKVFNRQFSTFHGA Trigger: GGCTCCATGGAATGTAGAGAACTGCCTATTAAACACCTTTGTTCAGAGACAGAGCATATCGTTTGTCTCAAAATAGAGCTTAAGACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR TCA 90 bp | TATAACCCAAGCGTCCACCCCTGTCCTGCCACCTCATACACGAGTCATGCTGCCGGGCACTTGCTAGCTTaGGCCAGCAGAGCCCGCACT | + |
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Preference number: 2 (lower is better) Translates to: YNPSVHPCPATSYTSHAAGHLLA*ASRART Trigger: AGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCC...GGCAGCATGACTCGTGTATGAGGTGGCAGGACAGGGGTGGACGCTTGGGTTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGACTCAACTGCCCAAGGGGATGCAGGTGCAGTCAGGAACCCAGGGGTCATGGCATCAGCTAAAGTaGAATGGTGGCCAGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PGTQLPKGMQVQSGTQGSWHQLK*NGGQTC Trigger: GCAGGTCTGGCCACCATTTCACTTTAGCTGATGCCA...TGACCCCTGGGTTCCTGACTGCACCTGCATCCCCTTGGGCAGTTGAGTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR CCA 90 bp | GCGGGCCCGGGAAATGACTGCAGGCTGAGACCCCTCAGAACTACCATGTGTTCCGCTTCACGTGGGAGATaGAAGGAAAGGTCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGPGNDCRLRPLRTTMCSASRGR*KERSPS Trigger: AGAGGGAGACCTTTCCTTCCATCTCCCACGTGAAGC...GGAACACATGGTAGTTCTGAGGGGTCTCAGCCTGCAGTCATTTCCCGGGCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGACTCAACTGCCCAAGGGGATGCAGGTGCAGTCAGGAACCCAGGGGTCACACATAGTGGAAGAATaGAAGGCTGTCGTCTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: PGTQLPKGMQVQSGTQGSHIVEE*KAVVCA Trigger: CGCACAGACGACAGCCTTCCATTCTTCCACTATGTG...TGACCCCTGGGTTCCTGACTGCACCTGCATCCCCTTGGGCAGTTGAGTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR TCA 90 bp | GCGGGCCCGGGAAATGACTGCAGGCTGAGACCCCTCAGAACTACCATGTGTTCCATCAGACCTTCAGAGTaGTCAGCGGAAAAGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGPGNDCRLRPLRTTMCSIRPSE*SAEKSQ Trigger: CTGGCTCTTTTCCGCTGATCACTCTGAAGGTCTGAT...GGAACACATGGTAGTTCTGAGGGGTCTCAGCCTGCAGTCATTTCCCGGGCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCAGAGAACTGAGTGCTGGACTTTGGTCAGCTGGGCAGGAAGAAGGGGAAGTCTCTCAGGGTGCTaGAAGAGTGAGCTGTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: PWQRTECWTLVSWAGRRGSLSGC*KSELYW Trigger: CCAATACAGCTCACTCTTTCAGCACCCTGAGAGACT...TCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGACTCAACTGCCCAAGGGGATGCAGGTGCAGTCAGGAACCCAGGGGTCATTTTCGCATGTCCACTaGATCACTCAGTGCCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: PGTQLPKGMQVQSGTQGSFSHVH*ITQCLI Trigger: AATCAGGCACTGAGTGATCCAGTGGACATGCGAAAA...TGACCCCTGGGTTCCTGACTGCACCTGCATCCCCTTGGGCAGTTGAGTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGGGCCCGGGAAATGACTGCAGGCTGAGACCCCTCAGAACTACCATGTGTTCCAAGAGTGAGCTGTATTaGGCCACACTTCCTTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AGPGNDCRLRPLRTTMCSKSELY*ATLPSP Trigger: TGGAGAAGGAAGTGTGGCCCAATACAGCTCACTCTT...GGAACACATGGTAGTTCTGAGGGGTCTCAGCCTGCAGTCATTTCCCGGGCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | CTTCTGTCTACTGCACGGCAGGAAGCAGCTGGGGCACTTGCTAGCTaGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLSTARQEAAGALAS*SQQSPHSYLFLHLL Trigger: AAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCCAGCTGCTTCCTGCCGTGCAGTAGACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCCCAACACCAACACGCTGGAGGGAGTCCGGCCTCATCACTCCTGGGGTCTGTGGAATCTACAAATaGAGACTCGTGAGAGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SLPTPTRWRESGLITPGVCGIYK*RLVRAD Trigger: ATCTGCTCTCACGAGTCTGCATTTGTAGATTCCACA...GACCCCAGGAGTGATGAGGCCGGACTCCCTCCAGCGTGTTGGTGTTGGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAATAACTGCTCCCCACTCTTTTTCTTCTTTGGAGCCACTGGGCTGTTCCCTTGGCCCGGGAAATGACTaGAGGCTGAGACCCCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PITAPHSFSSLEPLGCSLGPGND*RLRPLR Trigger: TCTGAGGGGTCTCAGCCTGCAGTCATTTCCCGGGCC...AAGGGAACAGCCCAGTGGCTCCAAAGAAGAAAAAGAGTGGGGAGCAGTTATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | ATGGAAGGCTGTCGTCTGTGCGAGAGAAACATTGTGTGTAGCTGTTaGCAGAGGAGCAGATGGCTAGGTGAGGGTAATGAGGGTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MEGCRLCERNIVCSC*QRSRWLGEGNEGLA Trigger: GGCCAGACCCTCATTACCCTCACCTAGCCATCTGCTCCTCTGCAAACAGCTACACACAATGTTTCTCTCGCACAGACGACAGCCTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | GCCGCAATACCTAGTAACCACCATGCAAAGGCCTGGAATCCATCCTaGTCACTCAAGCCGGTCTGGACAGTCACCTGCTTTGCTGACATG | + |
|
Preference number: 2 (lower is better) Translates to: AAIPSNHHAKAWNPS*SLKPVWTVTCFADM Trigger: CATGTCAGCAAAGCAGGTGACTGTCCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTGGTTACTAGGTATTGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGGACTCAACTGCCCAAGGGGATGCAGGTGCAGTCAGGAACCCAGGGGTCAACAGAAAGCAACAGGTaGAAGAAGTGTGTGATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PGTQLPKGMQVQSGTQGSTESNR*KKCVIF Trigger: AAAGATCACACACTTCTTTCACCTGTTGCTTTCTGT...TGACCCCTGGGTTCCTGACTGCACCTGCATCCCCTTGGGCAGTTGAGTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGCGTCCACCCCTGTCCTaGCACCTCATACACGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: IQRASLPSLTAQIAPMAGRPPLS*HLIHES Trigger: TGACTCGTGTATGAGGTGGCAGGACAGGGGTGGACG...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGGTAGCAGTGGTTCTCTaGTCCTGGGCTGAGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IQRASLPSLTAQIAPMAGVAVVL*SWAELD Trigger: GTCCAGCTCAGCCCAGGAGCAGAGAACCACTGCTAC...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGGACTCAACTGCCCAAGGGGATGCAGGTGCAGTCAGGAACCCAGGGGTCAAACAAGCATACACAATaGGAAGGAAAACAGAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: PGTQLPKGMQVQSGTQGSNKHTQ*EGKQNL Trigger: AAGGTTCTGTTTTCCTTCTCATTGTGTATGCTTGTT...TGACCCCTGGGTTCCTGACTGCACCTGCATCCCCTTGGGCAGTTGAGTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAATAACTGCTCCCCACTCTTTTTCTTCTTTGGAGCCACTGGGCTGTTCCCTTTCTCTGCTCCTGGGCTaGGCTGGACAAGAATACGCA | + |
|
Preference number: 2 (lower is better) Translates to: PITAPHSFSSLEPLGCSLSLLLG*AGQEYA Trigger: TGCGTATTCTTGTCCAGCTCAGCCCAGGAGCAGAGA...AAGGGAACAGCCCAGTGGCTCCAAAGAAGAAAAAGAGTGGGGAGCAGTTATTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTACAGAGTCTCTTGGAAGATGCCCATTCTTGCCGACATCAGCAGAGCGAAGGTCACTCAAGCCGGTCTaGACAGTCACCTGCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CTESLGRCPFLPTSAERRSLKPV*TVTCFA Trigger: AGCAAAGCAGGTGACTGTCCAGACCGGCTTGAGTGA...CCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CAA 90 bp | GCTTCCCAAACTGTCTGTACAGAGTCTCTTGGAAGATGCCCATTCTaGCCGACATCAGCAGAGCGAAGGTCAGTGCCGCAATACCTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ASQTVCTESLGRCPF*PTSAERRSVPQYLV Trigger: TACTAGGTATTGCGGCACTGACCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAGTTTGGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGACCCCTCAGAACTACCATGTGTTCCTCCCAGAACAGAAGAGGGCAGCCACAGATAGTTCTCTTTGCTaGTGCTGTTCAGACCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: ETPQNYHVFLPEQKRAATDSSLC*CCSDPS Trigger: TGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATC...TGTGGCTGCCCTCTTCTGTTCTGGGAGGAACACATGGTAGTTCTGAGGGGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCACTTGCTAGCTTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATTTGTGCCTGGAATGTTaGCTGTGCTGCAAAGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GALASLSQQSPHSYLFLHLCLEC*LCCKVL Trigger: AAGCACTTTGCAGCACAGCCAACATTCCAGGCACAA...ATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAACCCACAGGAGTCCCATaGAAGTGTGTGGCTGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QQSPHSYLFLHLLQQNPQPTGVP*KCVAGF Trigger: GAACCCAGCCACACACTTCCATGGGACTCCTGTGGG...TTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | GTATCTTCTGGCTACCAGGTCTTAACGCCTCTCACAGACACATATTaGAAACCCACAGGAGTCCCATGGAAGTGTGTGGCTGGGTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: VSSGYQVLTPLTDTY*KPTGVPWKCVAGFT Trigger: TGTGAACCCAGCCACACACTTCCATGGGACTCCTGTGGGTTTCAAATATGTGTCTGTGAGAGGCGTTAAGACCTGGTAGCCAGAAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | GAACATCAACTGTACATGGTAATATGCACACAAGCCTCTTCCCTCTTCCCTACCGTGAAATGTGCGTGGTaGGATCCAGCCGTCTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: EHQLYMVICTQASSLFPTVKCAW*DPAVYS Trigger: GGAGTAGACGGCTGGATCCCACCACGCACATTTCAC...GGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTACAGAGTCTCTTGGAAGATGCCCATTCTTGCCGACATCAGCAGAGCGAAGGGGCATAGTACCTTATTaGGATAGCTGGTGGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CTESLGRCPFLPTSAERRGIVPY*DSWWLP Trigger: AGGAAGCCACCAGCTATCCCAATAAGGTACTATGCC...CCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCCCAAACTGTCTGTACAGAGTCTCTTGGAAGATGCCCATTCTTGCCGACCACCATGCAAAGGCCTaGAATCCATCCTTGTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: CFPNCLYRVSWKMPILADHHAKA*NPSLSL Trigger: GAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTG...GTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAGTTTGGGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CAA 90 bp | CCATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGTTaGAGCACACTCACGCCTGTGTATCAATCAATCATCATCGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: PYLWNKKTSPCRSWG*STLTPVYQSIIIDD Trigger: GTCATCGATGATGATTGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | GGCCATTCTCTGGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAATaGCGAGCAAAGCACAAAGGCTTTCTTGTGTTGCTGGGGGATAAC | + |
|
Preference number: 2 (lower is better) Translates to: GHSLERKQTARKCSQ*RAKHKGFLVLLGDN Trigger: GTTATCCCCCAGCAACACAAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAGAGAATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGTAACCACCATGCAAAGGCCTGGAATCCATCCTTGTCACTCAAGCCGGTCTGGCAATCAGAGAGCCTaGTCTGAATATCATATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVTTMQRPGIHPCHSSRSGNQRA*SEYHMQ Trigger: CTGCATATGATATTCAGATCAGGCTCTCTGATTGCC...AGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTGGTTACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAGTGAGCTGTATTGGGCCACACTTCCTTCTCCATCTCCGTAAACAGGCCGAATGTTGGCTGTGCTaGAAAGTGCTTAAGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ERVSCIGPHFLLHLRKQAECWLC*KVLKCA Trigger: TGCACACTTAAGCACTTTGCAGCACAGCCAACATTC...GGCCTGTTTACGGAGATGGAGAAGGAAGTGTGGCCCAATACAGCTCACTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCACTTGCTAGCTTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATTCAGGGATGCCTATGTaGAATCTACAAATGCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: GALASLSQQSPHSYLFLHSGMPM*NLQMQT Trigger: AGTCTGCATTTGTAGATTCCACATAGGCATCCCTGA...ATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGGCTGAGGCCATTCTCTaGAAAGAAAGCAAACAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IQRASLPSLTAQIAPMAGAEAIL*KESKQL Trigger: GAGCTGTTTGCTTTCTTTCCAGAGAATGGCCTCAGC...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTCTACATTCCATGGAGCCTGGTCCTTGGTAAAATGGCTTATTTGCCCTTTTTAAGTGTGCAGGGGTaGCGGGAGGAAAGAGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: VLYIPWSLVLGKMAYLPFLSVQG*REERGT Trigger: TGTACCTCTTTCCTCCCGTCACCCCTGCACACTTAA...AAAGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTCTACATTCCATGGAGCCTGGTCCTTGGTAAAATGGCTTATTTGCCCTTTAGCCACTCCTCAGTCTaGGCACAGTCAGCACATAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLYIPWSLVLGKMAYLPFSHSSV*AQSAHS Trigger: ACTATGTGCTGACTGTGCTCAGACTGAGGAGTGGCT...AAAGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTATGGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGTAACAAACAAAGAGCTACAGTaGGCCGAGGAGATGGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HYGEGGRGLGKHLLSHVTNKELQ*AEEMES Trigger: GCTCTCCATCTCCTCGGCTCACTGTAGCTCTTTGTT...TGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAATAACTGCTCCCCACTCTTTTTCTTCTTTGGAGCCACTGGGCTGTTCCCTTACCCTAGAAAACTCCTaGAAATTACCACAAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PITAPHSFSSLEPLGCSLTLENS*KLPQAP Trigger: TGGGGCTTGTGGTAATTTTCAGGAGTTTTCTAGGGT...AAGGGAACAGCCCAGTGGCTCCAAAGAAGAAAAAGAGTGGGGAGCAGTTATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCCTGGAATCCATCCTTGTCACTCAAGCCGGTCTGGACAGTCACCTGCTTTAGAACATGGTTACCATaGTGGCATAGTACCTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: KAWNPSLSLKPVWTVTCFRTWLP*WHSTLL Trigger: CAATAAGGTACTATGCCATCATGGTAACCATGTTCT...AAAGCAGGTGACTGTCCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAAAGGGATACACATTCAATGGTGGCCAGACCTaGAGCAGAGGCCGCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLSVLTSPSTKPTKGYTFNGGQT*SRGRSH Trigger: GTGAGAGCGGCCTCTGCTGCAGGTCTGGCCACCATT...GAATGTGTATCCCTTTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGTTCAGAAATGAATTATaGATGCTCCCGGCCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IQRASLPSLTAQIAPMAGFRNEL*MLPASS Trigger: GGAAGAGGCCGGGAGCATGCATAATTCATTTCTGAA...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCTACATTCCATGGAGCCTGGTCCTTGGTAAAATGGCTTATTTGCCCTTTGACCATTACCAGCACTaGGAAGCTGTCAATGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLYIPWSLVLGKMAYLPFDHYQH*EAVNGQ Trigger: CTGGCCATTGACAGCTTCCCAGTGCTGGTAATGGTC...AAAGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTGTCAATGTCAGCTTCAAGTGCCACAGACAAGATGCAGTCAATAACTCTAAACATGCTGTGTCATaGCACCTCCCAGGCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: YSVNVSFKCHRQDAVNNSKHAVS*HLPGTP Trigger: GGGTGTGCCTGGGAGGTGGCATGACACAGCATGTTT...AGAGTTATTGACTGCATCTTGTCTGTGGCACTTGAAGCTGACATTGACAGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTATGGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGTAACATTTTCTTCTGTCTACTaGACGGCAGGAAGCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HYGEGGRGLGKHLLSHVTFSSVY*TAGSSW Trigger: CCAGCTGCTTCCTGCCGTGCAGTAGACAGAAGAAAA...TGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | GAACATCAACTGTACATGGTAATATGCACACAAGCCTCTTCCCTCTTCCCTACCCCGGCTAGAGGCCTTTaGTATTTGGCTTTTGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: EHQLYMVICTQASSLFPTPARGL*YLAFAL Trigger: TAGAGCAAAAGCCAAATAGCAAAGGCCTCTAGCCGG...GGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAAAGGGATACACATTCAAGAAGACTTCACCCTaGCGCAGCTGGGGTTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSVLTSPSTKPTKGYTFKKTSP*RSWGLS Trigger: GCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTT...GAATGTGTATCCCTTTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGGAAGGGGAAAGGATATaGAGAACCAACCTCATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IQRASLPSLTAQIAPMAGEGERI*RTNLIK Trigger: TTTTATGAGGTTGGTTCTGCATATCCTTTCCCCTTC...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTAAGAACTGAAAACATGTTTCTAGTGAAAGTGATAAAGACGGCGTCGGCAAGGGTGCTGAAAGAGTaGGCTGTATTGGGCCACACT | + |
|
Preference number: 2 (lower is better) Translates to: SLRTENMFLVKVIKTASARVLKE*AVLGHT Trigger: AGTGTGGCCCAATACAGCTCACTCTTTCAGCACCCT...TGCCGACGCCGTCTTTATCACTTTCACTAGAAACATGTTTTCAGTTCTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTATGGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGTAACAAGTTCTCTTTGCTGCTaGTGTTCAGACCCATCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HYGEGGRGLGKHLLSHVTSSLCC*CSDPSK Trigger: CTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACT...TGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTACAGAGTCTCTTGGAAGATGCCCATTCTTGCCGACATCAGCAGAGCGCCATTTTCTTTAAAATaGAGACAGTATGAGTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CLYRVSWKMPILADISRAPFSLK*RQYECF Trigger: GAAGCACTCATACTGTCTCCATTTTAAAGAAAATGG...CGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAAAGGGATACACATTCGAAGGCTGTCGTCTGTaGGAGAGAAACATTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSVLTSPSTKPTKGYTFEGCRL*ERNIVC Trigger: ACACACAATGTTTCTCTCGCACAGACGACAGCCTTC...GAATGTGTATCCCTTTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGATCACAGATCTGCTCATaGGGACAACTGCTTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRSQICS*GQLLLS Trigger: GGAGAGAAGCAGTTGTCCCCATGAGCAGATCTGTGA...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 90 bp | AAATGGCTCTTTACAAGAAATGACAGTAAAAAGGGCACATTCAGTTaGGCAAAACGTTCTATTCAAAGAGCCTCCCTTCCCTCCTTAACT | + |
|
Preference number: 2 (lower is better) Translates to: KWLFTRNDSKKGTFS*AKRSIQRASLPSLT Trigger: AGTTAAGGAGGGAAGGGAGGCTCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCTTGTAAAGAGCCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGATCACAGACACATATTTaGAACCCACAGGAGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRSQTHI*NPQESH Trigger: ATGGGACTCCTGTGGGTTTCAAATATGTGTCTGTGA...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CCACCCCTGTCCTGCCACCTCATACACGAGTCATGCTaGCGTGCGGCCGCAGACACACTACATTTCCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPLSCHLIHESC*RAAADTLHFPA Trigger: AGCCGGGAAATGTAGTGTGTCTGCGGCCGCACGGCAGCATGACTCGTGTATGAGGTGGCAGGACAGGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CGTCCACCCCTGTCCTGCCACCTCATACACGAGTCATaGTGCCGTGCGGCCGCAGACACACTACATTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: RPPLSCHLIHES*CRAAADTLHFP Trigger: CGGGAAATGTAGTGTGTCTGCGGCCGCACGGCAGCATGACTCGTGTATGAGGTGGCAGGACAGGGGTGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | CAGCCACAGGCAGCACCAACCACCCTGGCAGAGAACTaGGTGCTGGACTTTGGTCAGCTGGGCAGGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QPQAAPTTLAEN*VLDFGQLGRKK Trigger: CTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | ACACGGGGAGAGGAGAGCTTGGGGGAAGTACTCAACTaGAGGGAAGTGTCCAACCACAGGGCCCTGTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TRGEESLGEVLN*REVSNHRALCN Trigger: GTTGCACAGGGCCCTGTGGTTGGACACTTCCCTGCAGTTGAGTACTTCCCCCAAGCTCTCCTCTCCCCGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CACAGGCAGCACCAACCACCCTGGCAGAGAACTGAGTaGTGGACTTTGGTCAGCTGGGCAGGAAGAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HRQHQPPWQRTE*WTLVSWAGRRG Trigger: TCCCCTTCTTCCTGCCCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | ACAGAAGAGGGCAGCCACAGGCAGCACCAACCACCCTaGCAGAGAACTGAGTGCTGGACTTTGGTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TEEGSHRQHQPP*QRTECWTLVSW Trigger: CCAGCTGACCAAAGTCCAGCACTCAGTTCTCTGCCAGGGTGGTTGGTGCTGCCTGTGGCTGCCCTCTTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | CTGCACGGCAGGAAGCAGCTGGGGCACTTGCTAGCTTaGGCCAGCAGAGCCCGCACTCTTATCTGTTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LHGRKQLGHLLA*ASRARTLICSY Trigger: GTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCCAGCTGCTTCCTGCCGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CGGCATCCAGCTCACAGATCTGCTCATGGGGACAACTaGTTCTCTCCCAACACCAACACGCTGGAGGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RHPAHRSAHGDN*FSPNTNTLEGV Trigger: GACTCCCTCCAGCGTGTTGGTGTTGGGAGAGAAGCAGTTGTCCCCATGAGCAGATCTGTGAGCTGGATGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | CCAGCATCACCGGCATCCAGCTCACAGATCTGCTCATaGGGACAACTGCTTCTCTCCCAACACCAACACGCT | + |
|
Preference number: 3 (lower is better) Translates to: PASPASSSQICS*GQLLLSQHQHA Trigger: AGCGTGTTGGTGTTGGGAGAGAAGCAGTTGTCCCCATGAGCAGATCTGTGAGCTGGATGCCGGTGATGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | GAGGGTGCAACAAAGAGCTACAGTGAGCCGAGGAGATaGAGAGCCACTCCTCAGTCTGAGCACAGTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EGATKSYSEPRR*RATPQSEHSQH Trigger: GTGCTGACTGTGCTCAGACTGAGGAGTGGCTCTCCATCTCCTCGGCTCACTGTAGCTCTTTGTTGCACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | GGCTGGGTTCACAGGGGCAACAGTCTCTCAGGGTGCTaGAAGAGTGAGCTGTATTGGGCCACACTTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GWVHRGNSLSGC*KSELYWATLPS Trigger: AGAAGGAAGTGTGGCCCAATACAGCTCACTCTTTCAGCACCCTGAGAGACTGTTGCCCCTGTGAACCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTaGCGCAGCTGGGGTTTGAGCACACTCACGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AVPYLWNKKTSP*RSWGLSTLTPV Trigger: CACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | ATATGGGCGGTGTCTGGATGCAGACCAGGCCTTTTCTaGCTGTGGCTCTTTTGCTGCTTGCCTCATGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IWAVSGCRPGLF*LWLFCCLPHGG Trigger: ACCACCATGAGGCAAGCAGCAAAAGAGCCACAGGCAGAAAAGGCCTGGTCTGCATCCAGACACCGCCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | ACCTCCCAGGCACACCCAAAAGCAGTCCCATATCTATaGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSQAHPKAVPYL*NKKTSPCRSWG Trigger: ACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGTGTGCCTGGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | TCACAGGGGCAACAGTCTCTCAGGGTGCTGAAAGAGTaGGCTGTATTGGGCCACACTTCCTTCTCCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQGQQSLRVLKE*AVLGHTSFSIS Trigger: GGAGATGGAGAAGGAAGTGTGGCCCAATACAGCTCACTCTTTCAGCACCCTGAGAGACTGTTGCCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | GCGGTGTCTGGATGCAGACCAGGCCTTTTCTGCCTGTaGCTCTTTTGCTGCTTGCCTCATGGTGGTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: AVSGCRPGLFCL*LFCCLPHGGNF Trigger: GAAATTACCACCATGAGGCAAGCAGCAAAAGAGCCACAGGCAGAAAAGGCCTGGTCTGCATCCAGACACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTCTTGTGTTGCTGGGGGATAACCACTGCCTCCCACTTTGCCTGAGGAGTCACTCTTTTTCTTCTTaGGAGCCACTGGGCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GFLVLLGDNHCLPLCLRSHSFSS*EPLGCS Trigger: GGAACAGCCCAGTGGCTCCAAAGAAGAAAAAGAGTG...ACTCCTCAGGCAAAGTGGGAGGCAGTGGTTATCCCCCAGCAACACAAGAAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | CGTCAGACACTTTGCCAGGAGCTGGCAGTTCAGAAATaGATTATGCATGCTCCCGGCCTCTTCCATTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RQTLCQELAVQK*IMHAPGLFHSW Trigger: CCAGGAATGGAAGAGGCCGGGAGCATGCATAATTCATTTCTGAACTGCCAGCTCCTGGCAAAGTGTCTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GCCAGGCCTGTTTCTGTATGTAAACATGCTGTGTCATaGCACCTCCCAGGCACACCCAAAAGCAGTCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ARPVSVCKHAVS*HLPGTPKSSPI Trigger: TATGGGACTGCTTTTGGGTGTGCCTGGGAGGTGGCATGACACAGCATGTTTACATACAGAAACAGGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GGGGACCCAGAGGATTGGGATAGTTCTCTTTGCTGCTaGTGTTCAGACCCATCAAAGAGCATCTTCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GDPEDWDSSLCC*CSDPSKSIFRG Trigger: CCCTCTGAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GACCAGGCCTTTTCTGCCTGTGGCTCTTTTGCTGCTTaGCTCATGGTGGTAATTTCCGTAGGCAAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DQAFSACGSFAA*LMVVISVGKAQ Trigger: CTGAGCTTTGCCTACGGAAATTACCACCATGAGGCAAGCAGCAAAAGAGCCACAGGCAGAAAAGGCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CTGTCTGTACAGAGTCTCTTGGAAGATGCCCATTCTTaGCGACATCAGCAGAGCGAAGGTCAGTGCCGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSVQSLLEDAHS*RHQQSEGQCRN Trigger: ATTGCGGCACTGACCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CCA 72 bp | ACAGTTCTCTTTGCCTTCCCAGGGGACCCAGAGGATTaGGATAGTTCTCTTTGCTGCTGCTGTTCAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVLFAFPGDPED*DSSLCCCCSDP Trigger: TGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGAAGGCAAAGAGAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAACCCAAGCGTCCACCCCTGTCCTGCCACCTCATACACGAGTCATGCTGCCAGAGGCCTTTGCTATTaGGCTTTTGCTCTAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: YNPSVHPCPATSYTSHAARGLCY*AFALEF Trigger: AAACTCTAGAGCAAAAGCCAAATAGCAAAGGCCTCT...GGCAGCATGACTCGTGTATGAGGTGGCAGGACAGGGGTGGACGCTTGGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | GGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGTTTaGGCACACTCACGCCTGTGTATCAATCAATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRRLHPAAAGV*AHSRLCINQSS Trigger: TGATGATTGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | GAAGGGACATGTAGCAGTGGTTCTCTGCTCCTGGGCTaGGCTGGACAAGAATACGCAGTCGGTTCAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: EGTCSSGSLLLG*AGQEYAVGSDK Trigger: TTTATCTGAACCGACTGCGTATTCTTGTCCAGCTCAGCCCAGGAGCAGAGAACCACTGCTACATGTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTGCTaGTGCTGTTCAGACCCATCAAAGAGCATCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGDPEDWDSSLC*CCSDPSKSIFR Trigger: TCTGAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | TTCCCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTaGTGCTGCTGTTCAGACCCATCAAAGAGCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPGDPEDWDSSL*CCCSDPSKSIF Trigger: GAAGATGCTCTTTGATGGGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | AAGCTGGGTAGCATTCTCTGGACCTCTCCCAATAACTaGTCCCCACTCTTTTTCTTCTTTGGAGCCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KLGSILWTSPNN*SPLFFFFGATG Trigger: CCCAGTGGCTCCAAAGAAGAAAAAGAGTGGGGAGCAGTTATTGGGAGAGGTCCAGAGAATGCTACCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CTTGTGTTGCTGGGGGATAACCACTGCCTCCCACTTTaGCTGAGGAGTCTACCTTCCACCAGAAAAGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LVLLGDNHCLPL*LRSLPSTRKDV Trigger: TACATCTTTTCTGGTGGAAGGTAGACTCCTCAGGCAAAGTGGGAGGCAGTGGTTATCCCCCAGCAACACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GCTTCCCAAACTGTCTGTACAGAGTCTCTTGGAAGATaGCCATTCTTGCCGACATCAGCAGAGCGAAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASQTVCTESLGR*PFLPTSAERRS Trigger: TGACCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAGTTTGGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CCA 72 bp | GCATGTCCACTGGATCACTCAGTGCCTGATTGTGCCTaGAATGTTGGCTGTGCTGCAAAGTGCTTAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ACPLDHSVPDCA*NVGCAAKCLSV Trigger: CACACTTAAGCACTTTGCAGCACAGCCAACATTCCAGGCACAATCAGGCACTGAGTGATCCAGTGGACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | AAGGGGATCCAAGAGAGGACAATCAGACCTTCAGAGTaGTCAGCGGAAAAGAGCCAGGCCTGTTTCTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: KGIQERTIRPSE*SAEKSQACFCM Trigger: CATACAGAAACAGGCCTGGCTCTTTTCCGCTGATCACTCTGAAGGTCTGATTGTCCTCTCTTGGATCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GGGTCTAATTTTTCGCATGTCCACTGGATCACTCAGTaGCTGATTGTGCCTGGAATGTTGGCTGTGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSNFSHVHWITQ*LIVPGMLAVLQ Trigger: TTGCAGCACAGCCAACATTCCAGGCACAATCAGGCACTGAGTGATCCAGTGGACATGCGAAAAATTAGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | TTGCCAGGAGCTGGCAGTTCAGAAATGAATTATGCATaGTCCCGGCCTCTTCCATTCCTGGAATGTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LPGAGSSEMNYA*SRPLPFLECLQ Trigger: CTGTAGACATTCCAGGAATGGAAGAGGCCGGGAGCATGCATAATTCATTTCTGAACTGCCAGCTCCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CACTTTGCCAGGAGCTGGCAGTTCAGAAATGAATTATaGATGCTCCCGGCCTCTTCCATTCCTGGAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HFARSWQFRNEL*MLPASSIPGMS Trigger: AGACATTCCAGGAATGGAAGAGGCCGGGAGCATGCATAATTCATTTCTGAACTGCCAGCTCCTGGCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | CAATACTCTGGTAATTTGGCATCAGCTAAAGTGAAATaGTGGCCAGACCTGCAGCAGAGGCCGCTCTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QYSGNLASAKVK*WPDLQQRPLSH Trigger: ATGTGAGAGCGGCCTCTGCTGCAGGTCTGGCCACCATTTCACTTTAGCTGATGCCAAATTACCAGAGTATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | TATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTaGGGTTTGAGCACACTCACGCCTGTGTATCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: YLWNKKTSPCRS*GLSTLTPVYQS Trigger: TGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | AGAAACATTGTGTGTAGCTGTTTGCAGAGGAGCAGATaGCTAGGTGAGGGTAATGAGGGTCTGGCCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RNIVCSCLQRSR*LGEGNEGLALS Trigger: ACTTAGGGCCAGACCCTCATTACCCTCACCTAGCCATCTGCTCCTCTGCAAACAGCTACACACAATGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | CCTCAGTCTGAGCACAGTCAGCACATAGTGGAAGAATaGAAGGCTGTCGTCTGTGCGAGAGAAACATTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PQSEHSQHIVEE*KAVVCARETLC Trigger: ACACAATGTTTCTCTCGCACAGACGACAGCCTTCCATTCTTCCACTATGTGCTGACTGTGCTCAGACTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | TCTTCCCTACCACCACGCATCAAGAGAGCAAAAAGCTaGGTAGCATTCTCTGGACCTCTCCCAATAACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSLPPRIKRAKS*VAFSGPLPITA Trigger: AGCAGTTATTGGGAGAGGTCCAGAGAATGCTACCCAGCTTTTTGCTCTCTTGATGCGTGGTGGTAGGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | ATGTGGAATCTACAAATGCAGACTCGTGAGAGCAGATaGGTCCCATCCTTTTGGAGGAAGCTCTGGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MWNLQMQTRESR*VPSFWRKLWSL Trigger: AAGGCTCCAGAGCTTCCTCCAAAAGGATGGGACTCATCTGCTCTCACGAGTCTGCATTTGTAGATTCCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | AGGGATGCCTATGTGGAATCTACAAATGCAGACTCGTaGGAGCAGATGAGTCCCATCCTTTTGGAGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RDAYVESTNADS*EQMSPILLEEA Trigger: AGCTTCCTCCAAAAGGATGGGACTCATCTGCTCTCACGAGTCTGCATTTGTAGATTCCACATAGGCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | CTAATTTTTCGCATGTCCACTGGATCACTCAGTGCCTaGTTGTGCCTGGAATGTTGGCTGTGCTGCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LIFRMSTGSLSA*LCLECWLCCKV Trigger: CACTTTGCAGCACAGCCAACATTCCAGGCACAATCAGGCACTGAGTGATCCAGTGGACATGCGAAAAATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GTTCAGATAAAGCTTCCATGCAAGCTCTCTGCCGAGTaGTTCCCATACACTGCACTCTTACTAGCGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VQIKLPCKLSAE*FPYTALLLAML Trigger: AAGCATCGCTAGTAAGAGTGCAGTGTATGGGAAGCACTCGGCAGAGAGCTTGCATGGAAGCTTTATCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | AAGATACACAGCTCTCCAGACAGCAGTAATACTGACTaGAGGGTGCTGGTCACCAAGCAGCCACTTCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KIHSSPDSSNTD*RVLVTKQPLQK Trigger: TTTTTGAAGTGGCTGCTTGGTGACCAGCACCCTGCAGTCAGTATTACTGCTGTCTGGAGAGCTGTGTATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTCAGTGCCGCAATACCTAGTAACCACCATGCAAAGGCCTGGAATCCATCCATTCCTAGAATCATGTaGGCAATCAGAGAGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: KVSAAIPSNHHAKAWNPSIPRIM*AIREPD Trigger: ATCAGGCTCTCTGATTGCCAACATGATTCTAGGAAT...GGATGGATTCCAGGCCTTTGCATGGTGGTTACTAGGTATTGCGGCACTGACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR TCA 72 bp | GGGACTGTGAATGGGTTCACATCTAATTCAGGTCTTTaGGAACAGACCATTACCAGCACTGGGAAGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTVNGFTSNSGL*EQTITSTGKLS Trigger: TGACAGCTTCCCAGTGCTGGTAATGGTCTGTTCTCAAAGACCTGAATTAGATGTGAACCCATTCACAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GAGTTTCTTCCTGAACATCAACTGTACATGGTAATATaGACACAAGCCTCTTCCCTCTTCCCTACCACCACG | + |
|
Preference number: 3 (lower is better) Translates to: EFLPEHQLYMVI*TQASSLFPTTT Trigger: CGTGGTGGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTCAGGAAGAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | TGGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAATTaGGAGCAAAGCACAAAGGCTTTCTTGTGTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WKESKQLGNARN*EQSTKAFLCCW Trigger: CCAGCAACACAAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GGCCATTCTCTGGAAAGAAAGCAAACAGCTCGGAAATaGTCGCAATTGCGAGCAAAGCACAAAGGCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHSLERKQTARK*SQLRAKHKGFL Trigger: AAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAGAGAATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | CCATCCTTGTCACTCAAGCCGGTCTGGACAGTCACCTaGTTTGCTGACATGAAAGTGCAAATAAATATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSLSLKPVWTVT*FADMKVQINIP Trigger: AGGGATATTTATTTGCACTTTCATGTCAGCAAAGCAGGTGACTGTCCAGACCGGCTTGAGTGACAAGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CCA 72 bp | TGTAAGGAACCATTATGGAGAGGGAGGAAGAGGCCTTaGCAAGCATTTACTTTCTCATGTAACACACGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CKEPLWRGRKRP*QAFTFSCNTRQ Trigger: CTGACGTGTGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATGGTTCCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | TCAAATCATCCTTCTTGGGAAGCTGAGGCCATTCTCTaGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SNHPSWEAEAIL*KESKQLGNARN Trigger: ATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAGAGAATGGCCTCAGCTTCCCAAGAAGGATGATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTCAACAAAACGTCTGCCTGGTAGCCTaGCTTGTTTTGTTTATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSQQSPHSYLFLHLLQQNVCLVA*LVLFIL Trigger: TAGAATAAACAAAACAAGCAAGGCTACCAGGCAGAC...GTTTTGTTGAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAGGGGTTAGCTGGTGTAGGGAGGACAAACAGCATATGTGTGCTCTTATTTCTCACAGACACATATTaGAAACCCACAGGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IKGLAGVGRTNSICVLLFLTDTY*KPTGVP Trigger: TGGGACTCCTGTGGGTTTCAAATATGTGTCTGTGAG...AAATAAGAGCACACATATGCTGTTTGTCCTCCCTACACCAGCTAACCCCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTATGGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGTAACATGTGCGAGAGAAACATaGTGTGTAGCTGTTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HYGEGGRGLGKHLLSHVTCARET*CVAVCR Trigger: TCTGCAAACAGCTACACACAATGTTTCTCTCGCACA...TGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGACCACTGCCTCCCACTTaGCCTGAGGAGTCTACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRPLPPT*PEESTF Trigger: GAAGGTAGACTCCTCAGGCAAAGTGGGAGGCAGTGG...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | ACTGCTCAAATAGCTCCTATGGCTGGGAGTGAGGTCTaGTATTTACACAGCTCAAAGTCTGAATGCTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TAQIAPMAGSEV*YLHSSKSECSL Trigger: TAGTGAGCATTCAGACTTTGAGCTGTGTAAATATCAGACCTCACTCCCAGCCATAGGAGCTATTTGAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | GGTTACCATGATGGCATAGTACCTTATTGGGATAGCTaGTGGCTTCCTTCCCAAGTTAGCTTCAAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GYHDGIVPYWDS*WLPSQVSFKKE Trigger: TTCCTTTTTGAAGCTAACTTGGGAAGGAAGCCACCAGCTATCCCAATAAGGTACTATGCCATCATGGTAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTATGGAGAGGGAGGAAGAGGCCTTGGCAAGCATTTACTTTCTCATGTAACAATCATCATCGATGACTaGACAGGTGACAATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HYGEGGRGLGKHLLSHVTIIIDD*TGDNSQ Trigger: CTGAGAATTGTCACCTGTCAAGTCATCGATGATGAT...TGTTACATGAGAAAGTAAATGCTTGCCAAGGCCTCTTCCTCCCTCTCCATAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTGTCAATGTCAGCTTCAAGTGCCACAGACAAGATGCAGTCAATAACTCTCATGGAGCCTGGTCCTaGGTAAAATGGCTTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: YSVNVSFKCHRQDAVNNSHGAWS*VKWLIC Trigger: GCAAATAAGCCATTTTACCAAGGACCAGGCTCCATG...AGAGTTATTGACTGCATCTTGTCTGTGGCACTTGAAGCTGACATTGACAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | TCTCGATCCACTTTCAAGTTTTCTTCCTTTCTAATGTaGAATGAGCGCTGCAGGACTGCTCTAACTACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRSTFKFSSFLM*NERCRTALTTE Trigger: TTCTGTAGTTAGAGCAGTCCTGCAGCGCTCATTGCACATTAGAAAGGAAGAAAACTTGAAAGTGGATCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACATCAACTGTACATGGTAATATGCACACAAGCCTCTTCCCTCTTCCCTACCCAATACTCTGGTAATTaGGCATCAGCTAAAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EHQLYMVICTQASSLFPTQYSGN*ASAKVK Trigger: TTTCACTTTAGCTGATGCCAAATTACCAGAGTATTG...GGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | ATCCACTTTCAAGTTTTCTTCCTTTCTAATGTGCAATaGGCGCTGCAGGACTGCTCTAACTACAGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IHFQVFFLSNVQ*ALQDCSNYRKQ Trigger: TTGCTTTCTGTAGTTAGAGCAGTCCTGCAGCGCTCATTGCACATTAGAAAGGAAGAAAACTTGAAAGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | TCACGCCTGTGTATCAATCAATCATCATCGATGACTTaGCAGGTGACAATTCTCAGAAGTATCTTCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRLCINQSSSMT*QVTILRSIFWL Trigger: TAGCCAGAAGATACTTCTGAGAATTGTCACCTGTCAAGTCATCGATGATGATTGATTGATACACAGGCGTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | GTAGCCTTGCTTGTTTTGTTTATTCTATCTCAGGGATaGCTATGTGGAATCTACAAATGCAGACTCGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VALLVLFILSQG*LCGIYKCRLVR Trigger: TCTCACGAGTCTGCATTTGTAGATTCCACATAGGCATCCCTGAGATAGAATAAACAAAACAAGCAAGGCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR GCA 72 bp | ACATTTTCTCTATATTCTGTCAATGTCAGCTTCAAGTaGCACAGACAAGATGCAGTCAATAACTCTCAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: TFSLYSVNVSFK*HRQDAVNNSQR Trigger: CCGCTGAGAGTTATTGACTGCATCTTGTCTGTGGCACTTGAAGCTGACATTGACAGAATATAGAGAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAGCTCTGATCTTTGTTCTTAAAATGTACTACTCAATGAAGCGTTCCGAGGTCTTAAGCTCTATTTaGAGACAAACGATATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPALIFVLKMYYSMKRSEVLSSI*RQTICS Trigger: AGAGCATATCGTTTGTCTCAAAATAGAGCTTAAGAC...CTCGGAACGCTTCATTGAGTAGTACATTTTAAGAACAAAGATCAGAGCTGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR TCA 72 bp | ACATATTTCAAAGTAGCTACAGAGCTTCTGGGACTGTaGATGGGTTCACATCTAATTCAGGTCTTTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TYFKVATELLGL*MGSHLIQVFEN Trigger: GTTCTCAAAGACCTGAATTAGATGTGAACCCATTCACAGTCCCAGAAGCTCTGTAGCTACTTTGAAATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CCA 72 bp | GTGTTTAATAGGCAGTTCTCTACATTCCATGGAGCCTaGTCCTTGGTAAAATGGCTTATTTGCCCTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VFNRQFSTFHGA*SLVKWLICPFK Trigger: TTTAAAAGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAACTGCCTATTAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGAGAATATACAATAAAATaGAGAAGGGCCAGCCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RNDSKKGTFSLAKRSIQREYTIK*RRASLQ Trigger: TTGGAGGCTGGCCCTTCTCAATTTTATTGTATATTC...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR GCA 90 bp | GAGACCCCTCAGAACTACCATGTGTTCCTCCCAGAACAGAAGAGGGCAGCCACAATTACTGCAGCAGCCTaGGAACACCAGGCCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: ETPQNYHVFLPEQKRAATITAAA*EHQAHR Trigger: GCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAAT...TGTGGCTGCCCTCTTCTGTTCTGGGAGGAACACATGGTAGTTCTGAGGGGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR GCA 90 bp | CACCATGCAAAGGCCTGGAATCCATCCTTGTCACTCAAGCCGGTCTGGACAGTCATTACTGCAGCAGCCTaGGAACACCAGGCCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: HHAKAWNPSLSLKPVWTVITAAA*EHQAHR Trigger: GCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAAT...GACTGTCCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| CDS-3UTR TCA 90 bp | GAGACCCCTCAGAACTACCATGTGTTCCTCCCAGAACAGAAGAGGGCAGCCACACAGAGGCCAAGAAGATaGACCCGGGAAGTGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETPQNYHVFLPEQKRAATQRPRR*TREVEG Trigger: CCCTTCCACTTCCCGGGTTCATCTTCTTGGCCTCTG...TGTGGCTGCCCTCTTCTGTTCTGGGAGGAACACATGGTAGTTCTGAGGGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGGGACCCAGAGGATTGGGATAGTTCTCTTTGCTGCTGCTGTTCAGACCGGAGGTAGAACCACATaGCGGGCATCGTCACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQGTQRIGIVLFAAAVQTGGRTT*RASSHR Trigger: TCGGTGTGACGATGCCCGTCATGTGGTTCTACCTCC...GGTCTGAACAGCAGCAGCAAAGAGAACTATCCCAATCCTCTGGGTCCCCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR CCA 90 bp | GCGGGCCCGGGAAATGACTGCAGGCTGAGACCCCTCAGAACTACCATGTGTTCCCACCATGCAAAGGCCTaGAATCCATCCTTGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPGNDCRLRPLRTTMCSHHAKA*NPSLSL Trigger: GAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTG...GGAACACATGGTAGTTCTGAGGGGTCTCAGCCTGCAGTCATTTCCCGGGCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | ACTGCACGGCAGGAAGCAGCTGGGGCACTTGCTAGCTaGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TARQEAAGALAS*SQQSPHSYLFL Trigger: TAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCCAGCTGCTTCCTGCCGTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | TCGCAATTGCGAGCAAAGCACAAAGGCTTTCTTGTGTaGCTGGGGGATAACCACTGCCTCCCACTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLRAKHKGFLV*LGDNHCLPLCL Trigger: CAGGCAAAGTGGGAGGCAGTGGTTATCCCCCAGCAACACAAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | CCTAGTAACCACCATGCAAAGGCCTGGAATCCATCCTaGTCACTCAAGCCGGTCTGGACAGTCACCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNHHAKAWNPS*SLKPVWTVTCF Trigger: AAAGCAGGTGACTGTCCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGCCTTTGCATGGTGGTTACTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| 3UTR CAA 72 bp | ACTGTCTGTACAGAGTCTCTTGGAAGATGCCCATTCTaGCCGACATCAGCAGAGCGAAGGTCAGTGCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVCTESLGRCPF*PTSAERRSVPQ Trigger: TTGCGGCACTGACCTTCGCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCCCTCAGAACTACCATGTGTTCCTCCCAGAACAGAAGAGGGCAGCCACAGTCTGGACAGTCACCTaGTTTGCTGACATGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETPQNYHVFLPEQKRAATVWTVT*FADMKV Trigger: CACTTTCATGTCAGCAAAGCAGGTGACTGTCCAGAC...TGTGGCTGCCCTCTTCTGTTCTGGGAGGAACACATGGTAGTTCTGAGGGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGAGGCTGCCCGACGGTCTGCCTGGTAGCCTTGCTTGTTTTGTTTATTTCACTCAAGCCGGTCTaGACAGTCACCTGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCRGCPTVCLVALLVLFISLKPV*TVTCFA Trigger: AGCAAAGCAGGTGACTGTCCAGACCGGCTTGAGTGA...AATAAACAAAACAAGCAAGGCTACCAGGCAGACCGTCGGGCAGCCTCTGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCACTTGCTAGCTTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTGTACAGAGTCTCTTaGAAGATGCCCATTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GALASLSQQSPHSYLFLHLYRVS*KMPILA Trigger: GGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAG...ATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | GGCTACCAGGTCTTAACGCCTCTCACAGACACATATTaGAAACCCACAGGAGTCCCATGGAAGTGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GYQVLTPLTDTY*KPTGVPWKCVA Trigger: AGCCACACACTTCCATGGGACTCCTGTGGGTTTCAAATATGTGTCTGTGAGAGGCGTTAAGACCTGGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | TGGAACAAGAAGACTTCACCCTGCCGCAGCTGGGGTTaGAGCACACTCACGCCTGTGTATCAATCAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: WNKKTSPCRSWG*STLTPVYQSII Trigger: GATGATTGATTGATACACAGGCGTGAGTGTGCTCAAACCCCAGCTGCGGCAGGGTGAAGTCTTCTTGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | CTTGGAGTGCTTCCCAAACTGTCTGTACAGAGTCTCTaGGAAGATGCCCATTCTTGCCGACATCAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLPKLSVQSL*EDAHSCRHQQS Trigger: GCTCTGCTGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGACAGTTTGGGAAGCACTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGACGGTCTGCCTGGTAGCCTTGCTTGTTTTGTTTATTCTATCTCAGGGGAGTCTCTTGGAAGATaGCCATTCTTGCCGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPDGLPGSLACFVYSISGESLGR*PFLPTS Trigger: TGATGTCGGCAAGAATGGGCATCTTCCAAGAGACTC...CCCTGAGATAGAATAAACAAAACAAGCAAGGCTACCAGGCAGACCGTCGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTCTACATTCCATGGAGCCTGGTCCTTGGTAAAATGGCTTATTTGCCCTGAGGTGCCCAGCCAGTaGCACATAGTGAACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFSTFHGAWSLVKWLICPEVPSQ*HIVNWF Trigger: GAACCAGTTCACTATGTGGCACTGGCTGGGCACCTC...AGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | TGTCGTCTGTGCGAGAGAAACATTGTGTGTAGCTGTTaGCAGAGGAGCAGATGGCTAGGTGAGGGTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRLCERNIVCSC*QRSRWLGEGNE Trigger: CTCATTACCCTCACCTAGCCATCTGCTCCTCTGCAAACAGCTACACACAATGTTTCTCTCGCACAGACGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGGTGGCTTCCTTCCCAAGTTAGCTTCAAAAAGGAAGCCTTCCACAGCAATGGAAGATCACATTACTaGAGCAGCCTGCGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SWWLPSQVSFKKEAFHSNGRSHY*SSLRTP Trigger: TGGTGTTCGCAGGCTGCTGCAGTAATGTGATCTTCC...ATTGCTGTGGAAGGCTTCCTTTTTGAAGCTAACTTGGGAAGGAAGCCACCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCGACGGTCTGCCTGGTAGCCTTGCTTGTTTTGTTTATTCTATCTCAGGGAAAATAACGCCTCCTTaGAGTGCTTCCCAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPDGLPGSLACFVYSISGKITPP*SASQTV Trigger: GACAGTTTGGGAAGCACTCCAAGGAGGCGTTATTTT...CCCTGAGATAGAATAAACAAAACAAGCAAGGCTACCAGGCAGACCGTCGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR CCA 90 bp | GAGACCCCTCAGAACTACCATGTGTTCCTCCCAGAACAGAAGAGGGCAGCCACATGCCACATAGTGAACTaGTTCTGGAAGTACAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ETPQNYHVFLPEQKRAATCHIVN*FWKYKI Trigger: TATCTTGTACTTCCAGAACCAGTTCACTATGTGGCA...TGTGGCTGCCCTCTTCTGTTCTGGGAGGAACACATGGTAGTTCTGAGGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAAAAGCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTGCAGCTCACTTTTTGTaGTCCCGAGGTTTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TQKQSHIYGTRRLHPAAAAAHFL*SRGFST Trigger: TGTGGAAAAACCTCGGGACCACAAAAAGTGAGCTGC...AGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | TTTTTCTTCTTTGGAGCCACTGGGCTGTTCCCTTCCTaGGCTGTAAGGAACCATTATGGAGAGGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFFFGATGLFPS*AVRNHYGEGGR Trigger: TCTTCCTCCCTCTCCATAATGGTTCCTTACAGCCAAGGAAGGGAACAGCCCAGTGGCTCCAAAGAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| 3UTR CAA 72 bp | TTACACAGCTCAAAGTCTGAATGCTCACTAATGTCTTaGGGCTGTTCTACACACACGGCTGCTCTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSSKSECSLMS*GCSTHTAALCS Trigger: GGAGCACAGAGCAGCCGTGTGTGTAGAACAGCCCAAAGACATTAGTGAGCATTCAGACTTTGAGCTGTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR TCA 90 bp | CCAATAACTGCTCCCCACTCTTTTTCTTCTTTGGAGCCACTGGGCTGTTCCCTTGGCAATCAGAGAGCCTaGTCTGAATATCATATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PITAPHSFSSLEPLGCSLGNQRA*SEYHMQ Trigger: CTGCATATGATATTCAGATCAGGCTCTCTGATTGCC...AAGGGAACAGCCCAGTGGCTCCAAAGAAGAAAAAGAGTGGGGAGCAGTTATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTCAACAAAACTCAGAGAGCCTGATCTaGATATCATATGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQQSPHSYLFLHLLQQNSESLI*ISYAAA Trigger: TGCCGCTGCATATGATATTCAGATCAGGCTCTCTGA...GTTTTGTTGAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CCA 90 bp | CAGTTCTCTACATTCCATGGAGCCTGGTCCTTGGTAAAATGGCTTATTTGCCCTCCTTATTGGGATAGCTaGTGGCTTCCTTCCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QFSTFHGAWSLVKWLICPPYWDS*WLPSQV Trigger: AACTTGGGAAGGAAGCCACCAGCTATCCCAATAAGG...AGGGCAAATAAGCCATTTTACCAAGGACCAGGCTCCATGGAATGTAGAGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CCA 90 bp | GAACATCAACTGTACATGGTAATATGCACACAAGCCTCTTCCCTCTTCCCTACCGGCATAGTACCTTATTaGGATAGCTGGTGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EHQLYMVICTQASSLFPTGIVPY*DSWWLP Trigger: AGGAAGCCACCAGCTATCCCAATAAGGTACTATGCC...GGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CAA 72 bp | CTGGAAAGAAAGCAAACAGCTCGGAAATGCTCGCAATaGCGAGCAAAGCACAAAGGCTTTCTTGTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LERKQTARKCSQ*RAKHKGFLVLL Trigger: CAGCAACACAAGAAAGCCTTTGTGCTTTGCTCGCAATTGCGAGCATTTCCGAGCTGTTTGCTTTCTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR TCA 90 bp | ACCCAAAAGCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTAGAACATGGTTACCATaGTGGCATAGTACCTTATTG | + |
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Preference number: 4 (lower is better) Translates to: TQKQSHIYGTRRLHPAAARTWLP*WHSTLL Trigger: CAATAAGGTACTATGCCATCATGGTAACCATGTTCT...AGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR GCA 90 bp | AGTTTAAGAACTGAAAACATGTTTCTAGTGAAAGTGATAAAGACGGCGTCGGCAGGAAGATCACATTACTaGAGCAGCCTGCGAACACCA | + |
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Preference number: 4 (lower is better) Translates to: SLRTENMFLVKVIKTASAGRSHY*SSLRTP Trigger: TGGTGTTCGCAGGCTGCTGCAGTAATGTGATCTTCC...TGCCGACGCCGTCTTTATCACTTTCACTAGAAACATGTTTTCAGTTCTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CCA 90 bp | ACCCAAAAGCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTATAGTGAACTGGTTCTaGAAGTACAAGATAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TQKQSHIYGTRRLHPAAAIVNWF*KYKIEK Trigger: CTTTTCTATCTTGTACTTCCAGAACCAGTTCACTAT...AGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CAA 72 bp | CTCACGCCTGTGTATCAATCAATCATCATCGATGACTaGACAGGTGACAATTCTCAGAAGTATCTTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTPVYQSIIIDD*TGDNSQKYLLA Trigger: AGCCAGAAGATACTTCTGAGAATTGTCACCTGTCAAGTCATCGATGATGATTGATTGATACACAGGCGTGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR GCA 90 bp | TATTCTGTCAATGTCAGCTTCAAGTGCCACAGACAAGATGCAGTCAATAACTCTGCAATAAATAAGAACTaGGCAAACGTGACGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: YSVNVSFKCHRQDAVNNSAINKN*ANVTMF Trigger: GAACATCGTCACGTTTGCGCAGTTCTTATTTATTGC...AGAGTTATTGACTGCATCTTGTCTGTGGCACTTGAAGCTGACATTGACAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| 3UTR CAA 72 bp | TTTACAAGAAATGACAGTAAAAAGGGCACATTCAGTTaGGCAAAACGTTCTATTCAAAGAGCCTCCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: FTRNDSKKGTFS*AKRSIQRASLP Trigger: GGGAAGGGAGGCTCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCTTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR GCA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGAGCAAATAAATATCCCTaGAGACACCAGGGCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRANKYP*RHQGNG Trigger: TCCATTGCCCTGGTGTCTGCAGGGATATTTATTTGC...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR TCA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGAAGTCACCTGCTTTGCTaGCATGAAAGTGCAAATAAA | + |
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Preference number: 4 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRSHLLC*HESANK Trigger: TTTATTTGCACTTTCATGTCAGCAAAGCAGGTGACT...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR GCA 90 bp | AGAAATGACAGTAAAAAGGGCACATTCAGTTTGGCAAAACGTTCTATTCAAAGATTCTTGTCATCCTTTTaGAGCTCACTTTTTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RNDSKKGTFSLAKRSIQRFLSSF*SSLFVV Trigger: GACCACAAAAAGTGAGCTGCAAAAGGATGACAAGAA...TCTTTGAATAGAACGTTTTGCCAAACTGAATGTGCCCTTTTTACTGTCATTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 90 bp | ATCCTGGATGTGTCCGGGCCAGCAGCTCTAGGAAGATCACATTACTaGAGCAGCCTGCGAACACCAGGCCCACCGCGAAGGCCGGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: ILDVSGPAALGRSHY*SSLRTPGPPRRPGA Trigger: TGCGCCCGGCCTTCGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAATGTGATCTTCCTAGAGCTGCTGGCCCGGACACATCCAGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAAGCCTGGAATCCATCCTaGTCACTCAAGCCGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQSPHSYLFLHLLQQNPQAWNPS*SLKPVW Trigger: CCAGACCGGCTTGAGTGACAAGGATGGATTCCAGGC...TTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | GGGGCACTTGCTAGCTTGAGCCAGCAGAGCCCGCACTCTTATCTGTTCTTACATTCTGTACAGAGTCTCTaGGAAGATGCCCATTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GALASLSQQSPHSYLFLHSVQSL*EDAHSC Trigger: GCAAGAATGGGCATCTTCCAAGAGACTCTGTACAGA...ATGTAAGAACAGATAAGAGTGCGGGCTCTGCTGGCTCAAGCTAGCAAGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 90 bp | AAGTTAGCTTCAAAAAGGAAGCCTTCCACAGCAATAAATAAGAACTaGGCAAACGTGACGATGTTCCCGCATCCTGGATGTGTCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: KLASKRKPSTAINKN*ANVTMFPHPGCVRA Trigger: GGCCCGGACACATCCAGGATGCGGGAACATCGTCACGTTTGCGCAGTTCTTATTTATTGCTGTGGAAGGCTTCCTTTTTGAAGCTAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS CCA 90 bp | CATGAGGAGGTAGAACCACATGACGGGCATCGTCACACCGATGACTaGAACTTGATAGAGTTCAGACTTATTGAACAGGACAACGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: HEEVEPHDGHRHTDD*NLIEFRLIEQDNVV Trigger: GACCACGTTGTCCTGTTCAATAAGTCTGAACTCTATCAAGTTCCAGTCATCGGTGTGACGATGCCCGTCATGTGGTTCTACCTCCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | ATTCAAAGAGCCTCCCTTCCCTCCTTAACTGCTCAAATAGCTCCTATGGCTGGGCCGGATGCACACATATaGAGTCACGACATTCATGAG | + |
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Preference number: 5 (lower is better) Translates to: IQRASLPSLTAQIAPMAGPDAHI*SHDIHE Trigger: CTCATGAATGTCGTGACTCAATATGTGTGCATCCGG...CCCAGCCATAGGAGCTATTTGAGCAGTTAAGGAGGGAAGGGAGGCTCTTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | GAACATCAACTGTACATGGTAATATGCACACAAGCCTCTTCCCTCTTCCCTACCATGAGGCTCACAAACTaGCGCAGAGTCACAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: EHQLYMVICTQASSLFPTMRLTN*RRVTTS Trigger: ACTGGTTGTGACTCTGCGCAAGTTTGTGAGCCTCAT...GGTAGGGAAGAGGGAAGAGGCTTGTGTGCATATTACCATGTACAGTTGATGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | ACCCAAAAGCAGTCCCATATCTATGGAACAAGAAGACTTCACCCTGCCGCAGCTATTCCTAGAATCATGTaGGCAATCAGAGAGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TQKQSHIYGTRRLHPAAAIPRIM*AIREPD Trigger: ATCAGGCTCTCTGATTGCCAACATGATTCTAGGAAT...AGCTGCGGCAGGGTGAAGTCTTCTTGTTCCATAGATATGGGACTGCTTTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 90 bp | GTGTACATTAAGGTTCCAATGAAGACAAACGAGGTGCCCAGCCAGTaGCACATAGTGAACTGGTTCTGGAAGTACAAGATAGAAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: VYIKVPMKTNEVPSQ*HIVNWFWKYKIEKM Trigger: CATCTTTTCTATCTTGTACTTCCAGAACCAGTTCACTATGTGGCACTGGCTGGGCACCTCGTTTGTCTTCATTGGAACCTTAATGTACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGAGCCCGCACTCTTATCTGTTCTTACATCTCCTTCAACAAAACCCACAAGCAATGGAGGTATACTaGAACATACTGTATCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: QQSPHSYLFLHLLQQNPQAMEVY*NILYLF Trigger: GAAAAGATACAGTATGTTCAAGTATACCTCCATTGC...TTGTGGGTTTTGTTGAAGGAGATGTAAGAACAGATAAGAGTGCGGGCTCTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 72 bp | GTGTCCGGGCCAGCAGCTCTAGGAAGATCACATTACTaGAGCAGCCTGCGAACACCAGGCCCACCGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VSGPAALGRSHY*SSLRTPGPPRR Trigger: CCTTCGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAATGTGATCTTCCTAGAGCTGCTGGCCCGGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 72 bp | AGTCTCGGGCCAGCAGCTCTAGGAAGATCACATTACTaGAGCAGCCTGCGAACACCAGGCCCACCGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLGPAALGRSHY*SSLRTPGPPRR Trigger: CCTTCGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAATGTGATCTTCCTAGAGCTGCTGGCCCGAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138250.2 |
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| CDS CAA 72 bp | CCACATGACGGGCATCGTCACACCGATGACTGGAACTaGATAGAGTTCAGACTTATTGAACAGGACAACGTG | + |
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Preference number: 6 (lower is better) Translates to: PHDGHRHTDDWN*IEFRLIEQDNV Trigger: CACGTTGTCCTGTTCAATAAGTCTGAACTCTATCAAGTTCCAGTCATCGGTGTGACGATGCCCGTCATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS CAA 90 bp | AACTGGTTCTGGAAGTACAAGATAGAAAAGATGAGGCTCACAAACTaGCGCAGAGTCACAACCAGTGTGACGGTGAGGGAGGTACACTCT | + |
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Preference number: 6 (lower is better) Translates to: NWFWKYKIEKMRLTN*RRVTTSVTVREVHS Trigger: AGAGTGTACCTCCCTCACCGTCACACTGGTTGTGACTCTGCGCAAGTTTGTGAGCCTCATCTTTTCTATCTTGTACTTCCAGAACCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS GCA 72 bp | AAGGTTCCAATGAAGACAAACGAGGTGCCCAGCCAGTaGCACATAGTGAACTGGTTCTGGAAGTACAAGATA | + |
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Preference number: 6 (lower is better) Translates to: KVPMKTNEVPSQ*HIVNWFWKYKI Trigger: TATCTTGTACTTCCAGAACCAGTTCACTATGTGGCACTGGCTGGGCACCTCGTTTGTCTTCATTGGAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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| CDS CCA 72 bp | GTAGAACCACATGACGGGCATCGTCACACCGATGACTaGAACTTGATAGAGTTCAGACTTATTGAACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VEPHDGHRHTDD*NLIEFRLIEQD Trigger: GTCCTGTTCAATAAGTCTGAACTCTATCAAGTTCCAGTCATCGGTGTGACGATGCCCGTCATGTGGTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019143.9 |
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