Pregenerated sensors for SLC35B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021432Ensembl transcript IDs: ENSMUST00000021870.12, ENSMUST00000167513.3, ENSMUST00000224429.2, ENSMUST00000224645.2, ENSMUST00000225331.2, ENSMUST00000225396.2, ENSMUST00000225432.2, ENSMUST00000225461.2, ENSMUST00000225568.2, ENSMUST00000225714.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CAGTTGATGGATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATaGAGCCCCAGGCTGGTCACATATGCTGTGGGTTGCCCTGCATCC | + |
Preference number: 1 (lower is better) Translates to: QLMDAQGGSINFLQG*SPRLVTYAVGCPAS Trigger: GGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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3UTR GCA 90 bp | AGAGGCCCTGGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTaGGTAGGTAGCTTTCGCATAGACCCCAGGAGCACCTGCCCAGGG | + |
Preference number: 1 (lower is better) Translates to: RGPGGTWLTCFIFLA*VGSFRIDPRSTCPG Trigger: CCCTGGGCAGGTGCTCCTGGGGTCTATGCGAAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCCAGGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 90 bp | AGCATCAAGAAGCCTCACCTAGCGAAGGTACTGGCAGTTGATGGATaGCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAG | + |
Preference number: 1 (lower is better) Translates to: SIKKPHLAKVLAVDG*PGREHQFSSGMQPQ Trigger: CTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTGCCAGTACCTTCGCTAGGTGAGGCTTCTTGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CCA 90 bp | ACTCTGTCACATTGGTGCTCACACCCCACTAACAGTCAGCCACACTaGTGTGTACCCTTCACCCAGTCAGTCACTCTGCGTCCGTCATAC | + |
Preference number: 1 (lower is better) Translates to: TLSHWCSHPTNSQPH*CVPFTQSVTLRPSY Trigger: GTATGACGGACGCAGAGTGACTGACTGGGTGAAGGGTACACACCAGTGTGGCTGACTGTTAGTGGGGTGTGAGCACCAATGTGACAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 90 bp | TTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTTaGCCTGCATCCACTCACAGACTAGCAGCACCAATTAGACTCAGT | + |
Preference number: 1 (lower is better) Translates to: FLQGCSPRLVTYAVG*PASTHRLAAPIRLS Trigger: ACTGAGTCTAATTGGTGCTGCTAGTCTGTGAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 90 bp | GAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATaGTGTGGGTTGCCCTGCATCCACTCACAGACTAGCAGCACCAAT | + |
Preference number: 1 (lower is better) Translates to: EHQFSSGMQPQAGHI*CGLPCIHSQTSSTN Trigger: ATTGGTGCTGCTAGTCTGTGAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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3UTR CCA 90 bp | AACGGAATGGAGACACAGTGCCACTCACAGTACCGCGCTGCAGGCTaGGAGGATTTCCAATCAGTCTTACAACACGGTCCATTTCCAGTG | + |
Preference number: 1 (lower is better) Translates to: NGMETQCHSQYRAAG*EDFQSVLQHGPFPV Trigger: CACTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGCGGTACTGTGAGTGGCACTGTGTCTCCATTCCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CCA 90 bp | ACTCGGCCAGACTGGAACATATATCTTGCTCCCACTCTGTCACATTaGTGCTCACACCCCACTAACAGTCAGCCACACTGGTGTGTACCC | + |
Preference number: 1 (lower is better) Translates to: TRPDWNIYLAPTLSH*CSHPTNSQPHWCVP Trigger: GGGTACACACCAGTGTGGCTGACTGTTAGTGGGGTGTGAGCACCAATGTGACAGAGTGGGAGCAAGATATATGTTCCAGTCTGGCCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CCA 90 bp | TTTACTCAGCTCCTGCATTACACGCGTGCACTCAGTCATTGTGCATaGCATACTCCACTCTCATCGGCACTGACGCGCCACAAACACTCG | + |
Preference number: 1 (lower is better) Translates to: FTQLLHYTRALSHCA*HTPLSSALTRHKHS Trigger: CGAGTGTTTGTGGCGCGTCAGTGCCGATGAGAGTGGAGTATGCCATGCACAATGACTGAGTGCACGCGTGTAATGCAGGAGCTGAGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 90 bp | AAGCCAGACCATATATACCTAGCGAAGGTACTGGCAGTTGATGGATaGCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAG | + |
Preference number: 1 (lower is better) Translates to: KPDHIYLAKVLAVDG*PGREHQFSSGMQPQ Trigger: CTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTGCCAGTACCTTCGCTAGGTATATATGGTCTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR GCA 90 bp | AGTGAACGGCTTAGCAAAGAACAGGAAGGACAGGACAACGGTCATTaGTTTCCTTCCTGTTGTCACTGTTACAGCCAGAAGTGCACCGAA | + |
Preference number: 1 (lower is better) Translates to: SERLSKEQEGQDNGH*FPSCCHCYSQKCTE Trigger: TTCGGTGCACTTCTGGCTGTAACAGTGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGTCCTTCCTGTTCTTTGCTAAGCCGTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR TCA 90 bp | AAATATAAGCATCAAGAAGCCTCACCTAGCGAAGGTACTGGCAGTTaGTGGATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCA | + |
Preference number: 1 (lower is better) Translates to: KYKHQEASPSEGTGS*WMPREGASIFFRDA Trigger: TGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTGCCAGTACCTTCGCTAGGTGAGGCTTCTTGATGCTTATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CCA 90 bp | ACTCTTATAACAGAGAAGAATTTAAATAACACCAGCAAAACGGAATaGAGACACAGTGCCACTCACAGTACCGCGCTGCAGGCTGGGAGG | + |
Preference number: 1 (lower is better) Translates to: TLITEKNLNNTSKTE*RHSATHSTALQAGR Trigger: CCTCCCAGCCTGCAGCGCGGTACTGTGAGTGGCACTGTGTCTCCATTCCGTTTTGCTGGTGTTATTTAAATTCTTCTCTGTTATAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR GCA 90 bp | GTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTaGTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAA | + |
Preference number: 1 (lower is better) Translates to: VFCRGGCQGTTGCTI*SSDSGLQILWFVSQ Trigger: TTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CCA 90 bp | TGTACACAAACCCGATTGAGTAGGAATACAAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCATGGCCTTCTCCTGAACGTTCCCAA | + |
Preference number: 1 (lower is better) Translates to: CTQTRLSRNTKPSPS*KHCAVSWPSPERSQ Trigger: TTGGGAACGTTCAGGAGAAGGCCATGAAACTGCACAATGCTTCCAACTCGGAGATGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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3UTR TCA 90 bp | TCCTTCATACTGACTTTATTGCAACACGTCCTAGGTGTGGGCTCTTaGTCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGA | + |
Preference number: 1 (lower is better) Translates to: SFILTLLQHVLGVGS*SFGVDQKPVFCRGG Trigger: TCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAGAGCCCACACCTAGGACGTGTTGCAATAAAGTCAGTATGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR GCA 90 bp | ACATATACTTTACATATATACAAGAACAATCGTTTACTCAGCTCCTaGATTACACGCGTGCACTCAGTCATTGTGCATGGCATACTCCAC | + |
Preference number: 1 (lower is better) Translates to: TYTLHIYKNNRLLSS*ITRVHSVIVHGILH Trigger: GTGGAGTATGCCATGCACAATGACTGAGTGCACGCGTGTAATGCAGGAGCTGAGTAAACGATTGTTCTTGTATATATGTAAAGTATATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CCA 90 bp | GTTCCTACACAGTCTGTGCCAACGTCCTTGACTTTTTCATGTCCATaGCTTTCTTTATCATGTTGTACACCGATGGCAATCTTATTTTAT | + |
Preference number: 1 (lower is better) Translates to: VPTQSVPTSLTFSCP*LSLSCCTPMAILFY Trigger: ATAAAATAAGATTGCCATCGGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGACGTTGGCACAGACTGTGTAGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | CACCTGCCCAGGGATGGCACTGTGCACAGTGAGGTAGGTGAGTCCTCACATATGCAGGCTGGTCACATATaGTGTGGGTTGCCCTGCATC | + |
Preference number: 2 (lower is better) Translates to: HLPRDGTVHSEVGESSHMQAGHI*CGLPCI Trigger: GATGCAGGGCAACCCACAGCATATGTGACCAGCCTG...CATATGTGAGGACTCACCTACCTCACTGTGCACAGTGCCATCCCTGGGCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR CCA 90 bp | GATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 2 (lower is better) Translates to: DAQGGSINFLQGCSPRLVHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...GACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR TCA 90 bp | AGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTTTCATGGCCTTCTCCTaGACGTTCCCAATGACAGCG | + |
Preference number: 2 (lower is better) Translates to: SINFLQGCSPRLVTYAVGFMAFS*TFPMTA Trigger: CGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAA...ACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | AAAGGAGATCCCAAAGTATCCAGTGAGGGAAAACAGGAAGGCGTAGCCGTAAGTCCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 2 (lower is better) Translates to: KGDPKVSSEGKQEGVAVSPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...ACTTACGGCTACGCCTTCCTGTTTTCCCTCACTGGATACTTTGGGATCTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 |
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3UTR-3UTR CCA 90 bp | AGTCCCTTTCTACAGAGGGAGGTTAAGGTAGGACAGAAGCAGAGGCCCTGGAGGCTCAGTCATTGTGCATaGCATACTCCACTCTCATCG | + |
Preference number: 2 (lower is better) Translates to: SPFLQREVKVGQKQRPWRLSHCA*HTPLSS Trigger: CGATGAGAGTGGAGTATGCCATGCACAATGACTGAG...CCTCCAGGGCCTCTGCTTCTGTCCTACCTTAACCTCCCTCTGTAGAAAGGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR TCA 90 bp | CAGAACAAAGGAGATCCCAAAGTATCCAGTGAGGGAAAACAGGAAGGCGTAGCCTTCATGGCCTTCTCCTaGACGTTCCCAATGACAGCG | + |
Preference number: 2 (lower is better) Translates to: QNKGDPKVSSEGKQEGVAFMAFS*TFPMTA Trigger: CGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAA...GGCTACGCCTTCCTGTTTTCCCTCACTGGATACTTTGGGATCTCCTTTGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTCTGTAGAGGTGGATaGCAAGGAACCACTGGATGT | + |
Preference number: 2 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSFCRGG*QGTTGC Trigger: ACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | AGTCCCTTTCTACAGAGGGAGGTTAAGGTAGGACAGAAGCAGAGGCCCTGGAGGCTGGAACATATATCTTaGTCCCACTCTGTCACATTG | + |
Preference number: 2 (lower is better) Translates to: SPFLQREVKVGQKQRPWRLEHIS*SHSVTL Trigger: CAATGTGACAGAGTGGGAGCAAGATATATGTTCCAG...CCTCCAGGGCCTCTGCTTCTGTCCTACCTTAACCTCCCTCTGTAGAAAGGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR CCA 90 bp | CCTGGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTGCGTAGGTAGCTTTTGGTCACATATGCTGTaGGTTGCCCTGCATCCACTC | + |
Preference number: 2 (lower is better) Translates to: PGGTWLTCFIFLACVGSFWSHML*VALHPL Trigger: GAGTGGATGCAGGGCAACCCACAGCATATGTGACCA...AAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR CCA 90 bp | CGTAAGTCCCAACAGGGTTCTTTGAACAAAATGCCACTGCAGGGCCCAGTCCACAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 2 (lower is better) Translates to: RKSQQGSLNKMPLQGPVHKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...GTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGACTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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3UTR-3UTR CCA 90 bp | CCTGGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTGCGTAGGTAGCTTTGGAGAGAGTAGGAGGTaGATTTGGCTCATTGTCTAC | + |
Preference number: 2 (lower is better) Translates to: PGGTWLTCFIFLACVGSFGESRR*IWLIVY Trigger: GTAGACAATGAGCCAAATCCACCTCCTACTCTCTCC...AAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR CCA 90 bp | AAAGGAGATCCCAAAGTATCCAGTGAGGGAAAACAGGAAGGCGTAGCCGTAAGTCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 2 (lower is better) Translates to: KGDPKVSSEGKQEGVAVSHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...ACTTACGGCTACGCCTTCCTGTTTTCCCTCACTGGATACTTTGGGATCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 |
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3UTR-3UTR TCA 90 bp | ATGCCAAGGACAACTAACAAGCCAGACCATATATACCTAGCGAAGGTACTGGCACAGTCCACTAGTGCATaGCAGTCCCAGCAAAATGTA | + |
Preference number: 2 (lower is better) Translates to: MPRTTNKPDHIYLAKVLAQSTSA*QSQQNV Trigger: TACATTTTGCTGGGACTGTCATGCACTAGTGGACTG...TGCCAGTACCTTCGCTAGGTATATATGGTCTGGCTTGTTAGTTGTCCTTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATTTCTGTAGAGGTGGATaGCAAGGAACCACTGGATGT | + |
Preference number: 2 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYFCRGG*QGTTGC Trigger: ACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATTCTGTAGAGGTGGATaGCAAGGAACCACTGGATGT | + |
Preference number: 2 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQFCRGG*QGTTGC Trigger: ACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | CTGTGTCCAGTTGACATAAAATATAAGCATCAAGAAGCCTCACCTAGCGAAGGTAATTTTCTTCAGGGATaGAGCCCCAGGCTGGTCACA | + |
Preference number: 2 (lower is better) Translates to: LCPVDIKYKHQEASPSEGNFLQG*SPRLVT Trigger: TGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATT...ACCTTCGCTAGGTGAGGCTTCTTGATGCTTATATTTTATGTCAACTGGACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR GCA 90 bp | TGTCCATGGCTTTCTTTATCATGTTGTACACCGATGGCAATCTTATTTTATCCACCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 2 (lower is better) Translates to: CPWLSLSCCTPMAILFYPPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...TGGATAAAATAAGATTGCCATCGGTGTACAACATGATAAAGAAAGCCATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | CTGTGTCCAGTTGACATAAAATATAAGCATCAAGAAGCCTCACCTAGCGAAGGTTACACTCCCCTTTCATaGAGTCCCATGCTAACGAGA | + |
Preference number: 2 (lower is better) Translates to: LCPVDIKYKHQEASPSEGYTPLS*SPMLTR Trigger: TCTCGTTAGCATGGGACTGCATGAAAGGGGAGTGTA...ACCTTCGCTAGGTGAGGCTTCTTGATGCTTATATTTTATGTCAACTGGACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR GCA 90 bp | AATACCAGCTTCCTGTCTATCAAAGGCTACACTGTATGTTCAACCCAGTACTCAAAAAAGGACACAGTCTaGAGGAAGCAAAGGCTCACC | + |
Preference number: 2 (lower is better) Translates to: NTSFLSIKGYTVCSTQYSKKDTV*RKQRLT Trigger: GGTGAGCCTTTGCTTCCTGCAGACTGTGTCCTTTTT...TGAGTACTGGGTTGAACATACAGTGTAGCCTTTGATAGACAGGAAGCTGGTATT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR GCA 90 bp | GTCCTTGACTTTTTCATGTCCATGGCTTTCTTTATCATGTTGTACACCGATGGCGAGTTGGAAGCATTGTaGAGTTTCATGGCCTTCTCC | + |
Preference number: 2 (lower is better) Translates to: VLDFFMSMAFFIMLYTDGELEAL*SFMAFS Trigger: GGAGAAGGCCATGAAACTGCACAATGCTTCCAACTC...GCCATCGGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR CCA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAAAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 2 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR CAA 90 bp | GATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTaGTATCACAAGCCTTTGCAAAGTGAATTGATTAATGGTTGTTCC | + |
Preference number: 2 (lower is better) Translates to: DVQSAHLTAAFRSFG*YHKPLQSELINGCS Trigger: GGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR TCA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATTTGATCATTTGGAGTTaGTCAAAAGCCTGTATTCTG | + |
Preference number: 2 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYLIIWS*SKACIL Trigger: CAGAATACAGGCTTTTGATCAACTCCAAATGATCAA...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR GCA 90 bp | GTCCTTGACTTTTTCATGTCCATGGCTTTCTTTATCATGTTGTACACCGATGGCTTTATCTTTCTGGCCTaGGTAGGTAGCTTTCGCATA | + |
Preference number: 2 (lower is better) Translates to: VLDFFMSMAFFIMLYTDGFIFLA*VGSFRI Trigger: TATGCGAAAGCTACCTACGCAGGCCAGAAAGATAAA...GCCATCGGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CAA 90 bp | CATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTaGCAAAGTGAATTGATTAATGGTTGTTCCCACAGAGCTTTATTT | + |
Preference number: 2 (lower is better) Translates to: HLTAAFRSFGLYHKP*QSELINGCSHRALF Trigger: AAATAAAGCTCTGTGGGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR TCA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATTGATCATTTGGAGTTaGTCAAAAGCCTGTATTCTG | + |
Preference number: 2 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQLIIWS*SKACIL Trigger: CAGAATACAGGCTTTTGATCAACTCCAAATGATCAA...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
||
3UTR-3UTR TCA 90 bp | GTCCTTGACTTTTTCATGTCCATGGCTTTCTTTATCATGTTGTACACCGATGGCGATAAGAGACTGGGATaGAAAGAATTCTTTGTGGAG | + |
Preference number: 2 (lower is better) Translates to: VLDFFMSMAFFIMLYTDGDKRLG*KEFFVE Trigger: CTCCACAAAGAATTCTTTTCATCCCAGTCTCTTATC...GCCATCGGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR CAA 90 bp | ATCAGTCTTACAACACGGTCCATTTCCAGTGAAATGTTCAGAACATaGCTAGGAAGCACTTTCCTTCATACTGACTTTATTGCAACACGT | + |
Preference number: 2 (lower is better) Translates to: ISLTTRSISSEMFRT*LGSTFLHTDFIATR Trigger: ACGTGTTGCAATAAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGAAATGGACCGTGTTGTAAGACTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
||
3UTR-3UTR TCA 90 bp | AATACCAGCTTCCTGTCTATCAAAGGCTACACTGTATGTTCAACCCAGTACTCACACTGCTGTTTAAGGTaGAATATGAAATCCAGTATC | + |
Preference number: 2 (lower is better) Translates to: NTSFLSIKGYTVCSTQYSHCCLR*NMKSSI Trigger: GATACTGGATTTCATATTTCACCTTAAACAGCAGTG...TGAGTACTGGGTTGAACATACAGTGTAGCCTTTGATAGACAGGAAGCTGGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR-3UTR TCA 90 bp | TCCAGTGAAATGTTCAGAACATTGCTAGGAAGCACTTTCCTTCATACTGACTTTCTTTGCAAAGTGAATTaGTTAATGGTTGTTCCCACA | + |
Preference number: 2 (lower is better) Translates to: SSEMFRTLLGSTFLHTDFLCKVN*LMVVPT Trigger: TGTGGGAACAACCATTAATCAATTCACTTTGCAAAG...AAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
||
3UTR-3UTR TCA 90 bp | CCCTTCATCCCATCTCCATTCTCTGCCATAACAAATTCTATTAAAACACCATTTCTTTGCAAAGTGAATTaGTTAATGGTTGTTCCCACA | + |
Preference number: 2 (lower is better) Translates to: PFIPSPFSAITNSIKTPFLCKVN*LMVVPT Trigger: TGTGGGAACAACCATTAATCAATTCACTTTGCAAAG...AAATGGTGTTTTAATAGAATTTGTTATGGCAGAGAATGGAGATGGGATGAAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021870.12 ENSMUST00000225432.2 |
||
3UTR GCA 72 bp | GGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTTaGCCTGCATCCACTCACAGACTAGCAGCACCAATT | + |
Preference number: 3 (lower is better) Translates to: GCSPRLVTYAVG*PASTHRLAAPI Trigger: AATTGGTGCTGCTAGTCTGTGAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
||
3UTR CCA 72 bp | CTCCTGCATTACACGCGTGCACTCAGTCATTGTGCATaGCATACTCCACTCTCATCGGCACTGACGCGCCAC | + |
Preference number: 3 (lower is better) Translates to: LLHYTRALSHCA*HTPLSSALTRH Trigger: GTGGCGCGTCAGTGCCGATGAGAGTGGAGTATGCCATGCACAATGACTGAGTGCACGCGTGTAATGCAGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR GCA 72 bp | CACACTGGTGTGTACCCTTCACCCAGTCAGTCACTCTaGGTCCGTCATACACTCCCCTTTCATGCAGTCCCA | + |
Preference number: 3 (lower is better) Translates to: HTGVYPSPSQSL*VRHTLPFHAVP Trigger: TGGGACTGCATGAAAGGGGAGTGTATGACGGACGCAGAGTGACTGACTGGGTGAAGGGTACACACCAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR GCA 72 bp | TCAGCTCCTGCATTACACGCGTGCACTCAGTCATTGTaGATGGCATACTCCACTCTCATCGGCACTGACGCG | + |
Preference number: 3 (lower is better) Translates to: SAPALHACTQSL*MAYSTLIGTDA Trigger: CGCGTCAGTGCCGATGAGAGTGGAGTATGCCATGCACAATGACTGAGTGCACGCGTGTAATGCAGGAGCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR GCA 72 bp | TTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATaGTGTGGGTTGCCCTGCATCCACTCACAGACTAGC | + |
Preference number: 3 (lower is better) Translates to: FSSGMQPQAGHI*CGLPCIHSQTS Trigger: GCTAGTCTGTGAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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3UTR CCA 72 bp | CATTGGTGCTCACACCCCACTAACAGTCAGCCACACTaGTGTGTACCCTTCACCCAGTCAGTCACTCTGCGT | + |
Preference number: 3 (lower is better) Translates to: HWCSHPTNSQPH*CVPFTQSVTLR Trigger: ACGCAGAGTGACTGACTGGGTGAAGGGTACACACCAGTGTGGCTGACTGTTAGTGGGGTGTGAGCACCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR CCA 72 bp | GGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTaGTCACATATGCTGTGGGTTGCCCTGCATCCACTC | + |
Preference number: 3 (lower is better) Translates to: GASIFFRDAAPG*SHMLWVALHPL Trigger: GAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
||
3UTR TCA 72 bp | GTCATTGTGCATGGCATACTCCACTCTCATCGGCACTaGCGCGCCACAAACACTCGGCCAGACTGGAACATA | + |
Preference number: 3 (lower is better) Translates to: VIVHGILHSHRH*RATNTRPDWNI Trigger: TATGTTCCAGTCTGGCCGAGTGTTTGTGGCGCGTCAGTGCCGATGAGAGTGGAGTATGCCATGCACAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR GCA 72 bp | CGCCACAAACACTCGGCCAGACTGGAACATATATCTTaGTCCCACTCTGTCACATTGGTGCTCACACCCCAC | + |
Preference number: 3 (lower is better) Translates to: RHKHSARLEHIS*SHSVTLVLTPH Trigger: GTGGGGTGTGAGCACCAATGTGACAGAGTGGGAGCAAGATATATGTTCCAGTCTGGCCGAGTGTTTGTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 72 bp | TCAGTCACTCTGCGTCCGTCATACACTCCCCTTTCATaGAGTCCCATGCTAACGAGACCACATTTCCACTGG | + |
Preference number: 3 (lower is better) Translates to: SVTLRPSYTPLS*SPMLTRPHFHW Trigger: CCAGTGGAAATGTGGTCTCGTTAGCATGGGACTGCATGAAAGGGGAGTGTATGACGGACGCAGAGTGACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 72 bp | AAGCCTCACCTAGCGAAGGTACTGGCAGTTGATGGATaGCCAGGGAGGGAGCATCAATTTTCTTCAGGGATG | + |
Preference number: 3 (lower is better) Translates to: KPHLAKVLAVDG*PGREHQFSSGM Trigger: CATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTGCCAGTACCTTCGCTAGGTGAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR GCA 72 bp | GGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTaGGTAGGTAGCTTTCGCATAGACCCCAGGAGCACC | + |
Preference number: 3 (lower is better) Translates to: GGTWLTCFIFLA*VGSFRIDPRST Trigger: GGTGCTCCTGGGGTCTATGCGAAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR-3UTR CAA 90 bp | CCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATAAAACCATCTCCGAGTaGGAAGCATTGTGCAGTTTC | + |
Preference number: 3 (lower is better) Translates to: PREGASIFFRDAAPGWSHKTISE*EALCSF Trigger: GAAACTGCACAATGCTTCCAACTCGGAGATGGTTTT...ATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
||
3UTR-3UTR CAA 90 bp | CGTAAGTCCCAACAGGGTTCTTTGAACAAAATGCCACTGCAGGGCCCAGTCCACAAAACCATCTCCGAGTaGGAAGCATTGTGCAGTTTC | + |
Preference number: 3 (lower is better) Translates to: RKSQQGSLNKMPLQGPVHKTISE*EALCSF Trigger: GAAACTGCACAATGCTTCCAACTCGGAGATGGTTTT...GTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGACTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
||
3UTR GCA 72 bp | AGAACAATCGTTTACTCAGCTCCTGCATTACACGCGTaGACTCAGTCATTGTGCATGGCATACTCCACTCTC | + |
Preference number: 3 (lower is better) Translates to: RTIVYSAPALHA*TQSLCMAYSTL Trigger: GAGAGTGGAGTATGCCATGCACAATGACTGAGTGCACGCGTGTAATGCAGGAGCTGAGTAAACGATTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR GCA 72 bp | CATATATACCTAGCGAAGGTACTGGCAGTTGATGGATaGCCAGGGAGGGAGCATCAATTTTCTTCAGGGATG | + |
Preference number: 3 (lower is better) Translates to: HIYLAKVLAVDG*PGREHQFSSGM Trigger: CATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATCCATCAACTGCCAGTACCTTCGCTAGGTATATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
||
3UTR-3UTR CAA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCGAAATGTTCAGAACATaGCTAGGAAGCACTTTCCTT | + |
Preference number: 3 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSEMFRT*LGSTFL Trigger: AAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTC...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR CAA 90 bp | CGTAAGTCCCAACAGGGTTCTTTGAACAAAATGCCACTGCAGGGCCCAGTCCACTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 3 (lower is better) Translates to: RKSQQGSLNKMPLQGPVHCTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...GTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGACTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
||
3UTR-3UTR CAA 90 bp | CGTAAGTCCCAACAGGGTTCTTTGAACAAAATGCCACTGCAGGGCCCAGTCCACCTTGATCATTTGGAGTaGATCAAAAGCCTGTATTCT | + |
Preference number: 3 (lower is better) Translates to: RKSQQGSLNKMPLQGPVHLDHLE*IKSLYS Trigger: AGAATACAGGCTTTTGATCAACTCCAAATGATCAAG...GTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGACTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR-3UTR CAA 90 bp | AGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 3 (lower is better) Translates to: SINFLQGCSPRLVTYAVGCTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...ACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR TCA 72 bp | ATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTaGCAGCGGCCTTCAGATCCTTTGGTTTGTATCACA | + |
Preference number: 3 (lower is better) Translates to: MPRNHWMYNLLI*QRPSDPLVCIT Trigger: TGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CCA 72 bp | ACAGAGAAGAATTTAAATAACACCAGCAAAACGGAATaGAGACACAGTGCCACTCACAGTACCGCGCTGCAG | + |
Preference number: 3 (lower is better) Translates to: TEKNLNNTSKTE*RHSATHSTALQ Trigger: CTGCAGCGCGGTACTGTGAGTGGCACTGTGTCTCCATTCCGTTTTGCTGGTGTTATTTAAATTCTTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR CAA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCCCAACAGGGTTCTTaGAACAAAATGCCACTGCAG | + |
Preference number: 3 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQSQQGS*NKMPLQ Trigger: CTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGA...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR GCA 72 bp | GGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATaGCAAGGAACCACTGGATGTACAATCTGCTCATCT | + |
Preference number: 3 (lower is better) Translates to: GVDQKPVFCRGG*QGTTGCTICSS Trigger: AGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CCA 72 bp | GCTAACAACCATAACCAAAAGCAACTCAAGGAAGAATaGCTTTGTCTGGCTTACCCATCCCAAGTCCCTTTC | + |
Preference number: 3 (lower is better) Translates to: ANNHNQKQLKEE*LCLAYPSQVPF Trigger: GAAAGGGACTTGGGATGGGTAAGCCAGACAAAGCCATTCTTCCTTGAGTTGCTTTTGGTTATGGTTGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR CCA 72 bp | ACCCGATTGAGTAGGAATACAAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCATGGCCTTCTCCTGAA | + |
Preference number: 3 (lower is better) Translates to: TRLSRNTKPSPS*KHCAVSWPSPE Trigger: TTCAGGAGAAGGCCATGAAACTGCACAATGCTTCCAACTCGGAGATGGTTTTGTATTCCTACTCAATCGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000224429.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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3UTR-3UTR CAA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATGGGCTCTTGATCATTaGGAGTTGATCAAAAGCCTG | + |
Preference number: 3 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQWALDH*ELIKSL Trigger: CAGGCTTTTGATCAACTCCAAATGATCAAGAGCCCA...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CCA 72 bp | CAGTCTGTGCCAACGTCCTTGACTTTTTCATGTCCATaGCTTTCTTTATCATGTTGTACACCGATGGCAATC | + |
Preference number: 3 (lower is better) Translates to: QSVPTSLTFSCP*LSLSCCTPMAI Trigger: GATTGCCATCGGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGACGTTGGCACAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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3UTR TCA 72 bp | CTGACTTTATTGCAACACGTCCTAGGTGTGGGCTCTTaGTCATTTGGAGTTGATCAAAAGCCTGTATTCTGT | + |
Preference number: 3 (lower is better) Translates to: LTLLQHVLGVGS*SFGVDQKPVFC Trigger: ACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAGAGCCCACACCTAGGACGTGTTGCAATAAAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR-3UTR CAA 90 bp | AATACCAGCTTCCTGTCTATCAAAGGCTACACTGTATGTTCAACCCAGTACTCAACTGGAACATATATCTaGCTCCCACTCTGTCACATT | + |
Preference number: 3 (lower is better) Translates to: NTSFLSIKGYTVCSTQYSTGTYI*LPLCHI Trigger: AATGTGACAGAGTGGGAGCAAGATATATGTTCCAGT...TGAGTACTGGGTTGAACATACAGTGTAGCCTTTGATAGACAGGAAGCTGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR TCA 72 bp | CACAGACTAGCAGCACCAATTAGACTCAGTAGTGAATaGAAGATAGAATGCATTCAGTTGGGACAGAAATGT | + |
Preference number: 3 (lower is better) Translates to: HRLAAPIRLSSE*KIECIQLGQKC Trigger: ACATTTCTGTCCCAACTGAATGCATTCTATCTTTCATTCACTACTGAGTCTAATTGGTGCTGCTAGTCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR-3UTR CAA 90 bp | CCCTTCATCCCATCTCCATTCTCTGCCATAACAAATTCTATTAAAACACCATTTGAAATGTTCAGAACATaGCTAGGAAGCACTTTCCTT | + |
Preference number: 3 (lower is better) Translates to: PFIPSPFSAITNSIKTPFEMFRT*LGSTFL Trigger: AAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTC...AAATGGTGTTTTAATAGAATTTGTTATGGCAGAGAATGGAGATGGGATGAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021870.12 ENSMUST00000225432.2 |
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3UTR-3UTR CAA 90 bp | TGTCCATGGCTTTCTTTATCATGTTGTACACCGATGGCAATCTTATTTTATCCAGAAATGTTCAGAACATaGCTAGGAAGCACTTTCCTT | + |
Preference number: 3 (lower is better) Translates to: CPWLSLSCCTPMAILFYPEMFRT*LGSTFL Trigger: AAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTC...TGGATAAAATAAGATTGCCATCGGTGTACAACATGATAAAGAAAGCCATGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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3UTR TCA 72 bp | ATAGGAAAAAGGCACTTAATAGATAAGAGACTGGGATaGAAAGAATTCTTTGTGGAGGACAACAGGCTAACA | + |
Preference number: 3 (lower is better) Translates to: IGKRHLIDKRLG*KEFFVEDNRLT Trigger: TGTTAGCCTGTTGTCCTCCACAAAGAATTCTTTTCATCCCAGTCTCTTATCTATTAAGTGCCTTTTTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR TCA 72 bp | CCTTTGGTTTGTATCACAAGCCTTTGCAAAGTGAATTaGTTAATGGTTGTTCCCACAGAGCTTTATTTTAAA | + |
Preference number: 3 (lower is better) Translates to: PLVCITSLCKVN*LMVVPTELYFK Trigger: TTTAAAATAAAGCTCTGTGGGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR GCA 90 bp | GATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCCCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: DAQGGSINFLQGCSPRLVPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...GACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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3UTR CAA 72 bp | GGGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTaGCCCTGCATCCACTCACAGACTAGCAGCACCAAT | + |
Preference number: 4 (lower is better) Translates to: GMQPQAGHICCG*PCIHSQTSSTN Trigger: ATTGGTGCTGCTAGTCTGTGAGTGGATGCAGGGCAACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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CDS-3UTR CCA 90 bp | GATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATGGCCTGCGTTTTaGAGGGCACTGAGATGGAGA | + |
Preference number: 4 (lower is better) Translates to: DAQGGSINFLQGCSPRLVTWPAF*RALRWR Trigger: TCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGT...GACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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CDS-3UTR GCA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCCCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
||
CDS-3UTR CCA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCCTGTCTTTCTTCTGCTaGCTGGGCCTCTCCACCCTG | + |
Preference number: 4 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSLSFFC*LGLSTL Trigger: CAGGGTGGAGAGGCCCAGCCAGCAGAAGAAAGACAG...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR TCA 90 bp | AGTCCCTTTCTACAGAGGGAGGTTAAGGTAGGACAGAAGCAGAGGCCCTGGAGGTTCATGGCCTTCTCCTaGACGTTCCCAATGACAGCG | + |
Preference number: 4 (lower is better) Translates to: SPFLQREVKVGQKQRPWRFMAFS*TFPMTA Trigger: CGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAA...CCTCCAGGGCCTCTGCTTCTGTCCTACCTTAACCTCCCTCTGTAGAAAGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
||
3UTR CAA 72 bp | GCGCCACAAACACTCGGCCAGACTGGAACATATATCTaGCTCCCACTCTGTCACATTGGTGCTCACACCCCA | + |
Preference number: 4 (lower is better) Translates to: APQTLGQTGTYI*LPLCHIGAHTP Trigger: TGGGGTGTGAGCACCAATGTGACAGAGTGGGAGCAAGATATATGTTCCAGTCTGGCCGAGTGTTTGTGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR TCA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGTTCATGGCCTTCTCCTaGACGTTCCCAATGACAGCG | + |
Preference number: 4 (lower is better) Translates to: GCQGTTGCTICSSDSGLQFMAFS*TFPMTA Trigger: CGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAA...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
||
CDS-3UTR TCA 90 bp | CCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATCAGTCCACTAGTGCATaGCAGTCCCAGCAAAATGTA | + |
Preference number: 4 (lower is better) Translates to: PREGASIFFRDAAPGWSHQSTSA*QSQQNV Trigger: TACATTTTGCTGGGACTGTCATGCACTAGTGGACTG...ATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR GCA 90 bp | GAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTCCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: EPLDVQSAHLTAAFRSFGPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...ACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR TCA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCCTGTGCCAACGTCCTTaGCTTTTTCATGTCCATGGC | + |
Preference number: 4 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSLCQRP*LFHVHG Trigger: GCCATGGACATGAAAAAGTCAAGGACGTTGGCACAG...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCTTTCTTCTGCTGGCTaGGCCTCTCCACCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYLSSAG*ASPPCS Trigger: GGAGCAGGGTGGAGAGGCCCAGCCAGCAGAAGAAAG...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR CCA 90 bp | GCGCTGCAGGCTGGGAGGATTTCCAATCAGTCTTACAACACGGTCCATTTCCAGTGGAGGGCACTGAGATaGAGACATACTTCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: ALQAGRISNQSYNTVHFQWRALR*RHTSWS Trigger: ACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCA...CTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
||
CDS-3UTR TCA 90 bp | GCGCTGCAGGCTGGGAGGATTTCCAATCAGTCTTACAACACGGTCCATTTCCAGCAGTCCACTAGTGCATaGCAGTCCCAGCAAAATGTA | + |
Preference number: 4 (lower is better) Translates to: ALQAGRISNQSYNTVHFQQSTSA*QSQQNV Trigger: TACATTTTGCTGGGACTGTCATGCACTAGTGGACTG...CTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
||
CDS-3UTR TCA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGCAGTCCACTAGTGCATaGCAGTCCCAGCAAAATGTA | + |
Preference number: 4 (lower is better) Translates to: GCQGTTGCTICSSDSGLQQSTSA*QSQQNV Trigger: TACATTTTGCTGGGACTGTCATGCACTAGTGGACTG...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | GATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACCCCAATGACAGCGTCTaGACACAGCGCCAGGGAGAT | + |
Preference number: 4 (lower is better) Translates to: DVQSAHLTAAFRSFGLYHPNDSV*TQRQGD Trigger: ATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGG...GTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGGAGTTGGAAGCATTGTaGAGTTTCATGGCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: GCQGTTGCTICSSDSGLQELEAL*SFMAFS Trigger: GGAGAAGGCCATGAAACTGCACAATGCTTCCAACTC...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
||
CDS-3UTR CCA 90 bp | TGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCACATGGCCTGCGTTTTaGAGGGCACTGAGATGGAGA | + |
Preference number: 4 (lower is better) Translates to: CRGGCQGTTGCTICSSDSTWPAF*RALRWR Trigger: TCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGT...GCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR CCA 90 bp | ATTGTGCAGTTTCATGGCCTTCTCCTGAACGTTCCCAATGACAGCGTCTGCACAACATGGCCTGCGTTTTaGAGGGCACTGAGATGGAGA | + |
Preference number: 4 (lower is better) Translates to: IVQFHGLLLNVPNDSVCTTWPAF*RALRWR Trigger: TCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGT...TGTGCAGACGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAAACTGCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225461.2 ENSMUST00000225714.2 |
||
CDS-3UTR CCA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 4 (lower is better) Translates to: GCQGTTGCTICSSDSGLQHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | TCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGGCCACAGTCAAGGCCTaGAACTTGGTCTCTGCTCTT | + |
Preference number: 4 (lower is better) Translates to: SAHLTAAFRSFGLYHKPLATVKA*NLVSAL Trigger: AAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGC...CAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR GCA 90 bp | GTCAGCCACACTGGTGTGTACCCTTCACCCAGTCAGTCACTCTGCGTCCGTCATTGTTACAGCCAGAAGTaGACCGAAGATTTTAATGAG | + |
Preference number: 4 (lower is better) Translates to: VSHTGVYPSPSQSLCVRHCYSQK*TEDFNE Trigger: CTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACA...ATGACGGACGCAGAGTGACTGACTGGGTGAAGGGTACACACCAGTGTGGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CCA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCGAAGATGACTTGGGTTaGGTAATTCAGGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSEDDLG*VIQVAQ Trigger: TTGGGCTACCTGAATTACCCAACCCAAGTCATCTTC...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR TCA 90 bp | TCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: SAHLTAAFRSFGLYHKPLLLLLS*VSCSSI Trigger: AATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG...CAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR GCA 90 bp | TGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCCTGCAACTTGGTCTCTaGTCTTTTCGGATGCTTCGT | + |
Preference number: 4 (lower is better) Translates to: CRGGCQGTTGCTICSSDSLQLGL*SFRMLR Trigger: ACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAG...GCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR GCA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACCCATTGTTTCTGCTCTaGCACAGTCAAGGCCTGCAA | + |
Preference number: 4 (lower is better) Translates to: FCRGGCQGTTGCTICSSDPLFLL*HSQGLQ Trigger: TTGCAGGCCTTGACTGTGGCAGAGCAGAAACAATGG...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR GCA 90 bp | TGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGAGTTGGAAGCATTGTaGAGTTTCATGGCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: CRGGCQGTTGCTICSSDSELEAL*SFMAFS Trigger: GGAGAAGGCCATGAAACTGCACAATGCTTCCAACTC...GCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGCAAAGTGAAACATGGCCTGCGTTTTaGAGGGCACTGAGATGGAGA | + |
Preference number: 4 (lower is better) Translates to: LTAAFRSFGLYHKPLQSETWPAF*RALRWR Trigger: TCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGT...TTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | GAACACAGTTCCTACACAGTCTGTGCCAACGTCCTTGACTTTTTCATGTCCATGCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: EHSSYTVCANVLDFFMSMLLLLS*VSCSSI Trigger: AATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG...CATGGACATGAAAAAGTCAAGGACGTTGGCACAGACTGTGTAGGAACTGTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTTTCATGGCCTTCTCCTaGACGTTCCCAATGACAGCG | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTFMAFS*TFPMTA Trigger: CGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAA...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR TCA 90 bp | GTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTCTGTGCCAACGTCCTTaGCTTTTTCATGTCCATGGC | + |
Preference number: 4 (lower is better) Translates to: VFCRGGCQGTTGCTICSSLCQRP*LFHVHG Trigger: GCCATGGACATGAAAAAGTCAAGGACGTTGGCACAG...AGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTACATGGCCTGCGTTTTaGAGGGCACTGAGATGGAGA | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTTWPAF*RALRWR Trigger: TCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGT...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR CCA 90 bp | GAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTGAAGATGACTTGGGTTaGGTAATTCAGGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: EPLDVQSAHLTAAFRSFGEDDLG*VIQVAQ Trigger: TTGGGCTACCTGAATTACCCAACCCAAGTCATCTTC...ACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: GCQGTTGCTICSSDSGLQCQIKV*CNCAVS Trigger: GCTGACAGCACAATTGCACCAAACTTTAATCTGACA...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CGTAAGTCCCAACAGGGTTCTTTGAACAAAATGCCACTGCAGGGCCCAGTCCACTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: RKSQQGSLNKMPLQGPVHCQIKV*CNCAVS Trigger: GCTGACAGCACAATTGCACCAAACTTTAATCTGACA...GTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGACTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224429.2 |
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CDS-3UTR CCA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 4 (lower is better) Translates to: FCRGGCQGTTGCTICSSDHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CCTGGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTGCGTAGGTAGCTTTCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 4 (lower is better) Translates to: PGGTWLTCFIFLACVGSFHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...AAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR TCA 90 bp | ACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGCAAAGTGAATTGCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: TAAFRSFGLYHKPLQSELLLLLS*VSCSSI Trigger: AATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG...CAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | ACCCGATTGAGTAGGAATACAAAACCATCTCCGAGTTGGAAGCATTGTGCAGTTCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: TRLSRNTKPSPSWKHCAVLLLLS*VSCSSI Trigger: AATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG...AACTGCACAATGCTTCCAACTCGGAGATGGTTTTGTATTCCTACTCAATCGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS-3UTR TCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTCTGTGCCAACGTCCTTaGCTTTTTCATGTCCATGGC | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTLCQRP*LFHVHG Trigger: GCCATGGACATGAAAAAGTCAAGGACGTTGGCACAG...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | TCCAGTGAAATGTTCAGAACATTGCTAGGAAGCACTTTCCTTCATACTGACTTTGTCCTGTCTTTCTTCTaGTGGCTGGGCCTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: SSEMFRTLLGSTFLHTDFVLSFF*WLGLST Trigger: GGTGGAGAGGCCCAGCCAGCAGAAGAAAGACAGGAC...AAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR CCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTTGGAGGGCACTGAGATaGAGACATACTTCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTWRALR*RHTSWS Trigger: ACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCA...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR CCA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATGGAGGGCACTGAGATaGAGACATACTTCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQWRALR*RHTSWS Trigger: ACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCA...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | CTTGATCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATT | + |
Preference number: 4 (lower is better) Translates to: LDHLELIKSLYSVEVDAKLLLLS*VSCSSI Trigger: AATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG...CTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTCAGTCCACTAGTGCATaGCAGTCCCAGCAAAATGTA | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTQSTSA*QSQQNV Trigger: TACATTTTGCTGGGACTGTCATGCACTAGTGGACTG...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACCAGATTAAAGTTTGGTaGAATTGTGCTGTCAGCGAG | + |
Preference number: 4 (lower is better) Translates to: FCRGGCQGTTGCTICSSDQIKVW*NCAVSE Trigger: CTCGCTGACAGCACAATTGCACCAAACTTTAATCTG...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | CATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCAGAGTTGGAAGCATTGTaGAGTTTCATGGCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: HLELIKSLYSVEVDAKEPELEAL*SFMAFS Trigger: GGAGAAGGCCATGAAACTGCACAATGCTTCCAACTC...TGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | TGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: CRGGCQGTTGCTICSSDSCQIKV*CNCAVS Trigger: GCTGACAGCACAATTGCACCAAACTTTAATCTGACA...GCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | ATTGTGCAGTTTCATGGCCTTCTCCTGAACGTTCCCAATGACAGCGTCTGCACAGGCCAGAAATCTAACTaGGCTGTCAGATTAAAGTTT | + |
Preference number: 4 (lower is better) Translates to: IVQFHGLLLNVPNDSVCTGQKSN*AVRLKF Trigger: AAACTTTAATCTGACAGCCCAGTTAGATTTCTGGCC...TGTGCAGACGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAAACTGCACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224429.2 |
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CDS-3UTR CCA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACCATGTAGGTTTTTCCTaGTATTCTTCTCCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: FCRGGCQGTTGCTICSSDHVGFS*YSSPSV Trigger: GACAGAAGGAGAAGAATACCAGGAAAAACCTACATG...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAAGAAGATGACTTGGGTTaGGTAATTCAGGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQEDDLG*VIQVAQ Trigger: TTGGGCTACCTGAATTACCCAACCCAAGTCATCTTC...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CTTGATCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGCATTGTGCAGTTTCATaGCCTTCTCCTGAACGTTCC | + |
Preference number: 4 (lower is better) Translates to: LDHLELIKSLYSVEVDAKHCAVS*PSPERS Trigger: GGAACGTTCAGGAGAAGGCCATGAAACTGCACAATG...CTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | GTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: VFCRGGCQGTTGCTICSSKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...AGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | GATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: DVQSAHLTAAFRSFGLYHKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...GTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR TCA 90 bp | CATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCATTGTACCGCTTTCCTTaGATAAAAACTCCTCCTAGC | + |
Preference number: 4 (lower is better) Translates to: HLELIKSLYSVEVDAKEPLYRFP*IKTPPS Trigger: GCTAGGAGGAGTTTTTATTCAAGGAAAGCGGTACAA...TGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | GATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACTGTTACAGCCAGAAGTaGACCGAAGATTTTAATGAG | + |
Preference number: 4 (lower is better) Translates to: DVQSAHLTAAFRSFGLYHCYSQK*TEDFNE Trigger: CTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACA...GTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR GCA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATTGTTACAGCCAGAAGTaGACCGAAGATTTTAATGAG | + |
Preference number: 4 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYCYSQK*TEDFNE Trigger: CTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACA...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCATGTAGGTTTTTCCTaGTATTCTTCTCCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYHVGFS*YSSPSV Trigger: GACAGAAGGAGAAGAATACCAGGAAAAACCTACATG...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | CTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGCAAAGTGAACATGTAGGTTTTTCCTaGTATTCTTCTCCTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: LTAAFRSFGLYHKPLQSEHVGFS*YSSPSV Trigger: GACAGAAGGAGAAGAATACCAGGAAAAACCTACATG...TTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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3UTR CAA 72 bp | GCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTaGCAAAGTGAATTGATTAATGGTTGTTCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: AAFRSFGLYHKP*QSELINGCSHR Trigger: TCTGTGGGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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3UTR CAA 72 bp | GAGAACACAGTTCCTACACAGTCTGTGCCAACGTCCTaGACTTTTTCATGTCCATGGCTTTCTTTATCATGT | + |
Preference number: 4 (lower is better) Translates to: ENTVPTQSVPTS*TFSCPWLSLSC Trigger: ACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGACGTTGGCACAGACTGTGTAGGAACTGTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000225396.2 ENSMUST00000225461.2 |
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CDS-3UTR TCA 90 bp | CTTGATCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGTTGTACCGCTTTCCTTaGATAAAAACTCCTCCTAGC | + |
Preference number: 4 (lower is better) Translates to: LDHLELIKSLYSVEVDAKLYRFP*IKTPPS Trigger: GCTAGGAGGAGTTTTTATTCAAGGAAAGCGGTACAA...CTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CCA 90 bp | TTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: FGVDQKPVFCRGGCQGTTCQIKV*CNCAVS Trigger: GCTGACAGCACAATTGCACCAAACTTTAATCTGACA...AGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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3UTR CAA 72 bp | TCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTaGTATCACAAGCCTTTGCAAAGTGAATTGATTAAT | + |
Preference number: 4 (lower is better) Translates to: SAHLTAAFRSFG*YHKPLQSELIN Trigger: ATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225461.2 |
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CDS-3UTR CCA 90 bp | TTTAAAGAGGAGAGAGTAGGAGGTGGATTTGGCTCATTGTCTACATTGTATAGAAAACCATCTCCGAGTTaGAAGCATTGTGCAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: FKEERVGGGFGSLSTLYRKPSPS*KHCAVS Trigger: TGAAACTGCACAATGCTTCCAACTCGGAGATGGTTT...TCTATACAATGTAGACAATGAGCCAAATCCACCTCCTACTCTCTCCTCTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CCA 90 bp | TTTAAAGAGGAGAGAGTAGGAGGTGGATTTGGCTCATTGTCTACATTGTATAGATGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGC | + |
Preference number: 4 (lower is better) Translates to: FKEERVGGGFGSLSTLYRCQIKV*CNCAVS Trigger: GCTGACAGCACAATTGCACCAAACTTTAATCTGACA...TCTATACAATGTAGACAATGAGCCAAATCCACCTCCTACTCTCTCCTCTTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR GCA 90 bp | CCCTTCATCCCATCTCCATTCTCTGCCATAACAAATTCTATTAAAACACCATTTTGTTACAGCCAGAAGTaGACCGAAGATTTTAATGAG | + |
Preference number: 4 (lower is better) Translates to: PFIPSPFSAITNSIKTPFCYSQK*TEDFNE Trigger: CTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACA...AAATGGTGTTTTAATAGAATTTGTTATGGCAGAGAATGGAGATGGGATGAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021870.12 ENSMUST00000225432.2 |
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CDS GCA 90 bp | CTGAGGTTCACGCCCAGCACCACGACGTCCTCAACTGACTTGATGTaGGGCGACATGGCCTGCGTTTTGGAGGGCACTGAGATGGAGACA | + |
Preference number: 5 (lower is better) Translates to: LRFTPSTTTSSTDLM*GDMACVLEGTEMET Trigger: TGTCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS GCA 90 bp | AGCACCACGACGTCCTCAACTGACTTGATGTGCGGCGACATGGCCTaGGTTTTGGAGGGCACTGAGATGGAGACATACTTCCTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: STTTSSTDLMCGDMA*VLEGTEMETYFLEL Trigger: CAACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGTGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS GCA 90 bp | GCTGTCAGCGAGGGTAAACCAGATCAGGCCCAGGCTCATGCACACTaGGGCAGACACATCTGCAAGGTTGTACCGCTTTCCTTGAATAAA | + |
Preference number: 5 (lower is better) Translates to: AVSEGKPDQAQAHAH*GRHICKVVPLSLNK Trigger: TTTATTCAAGGAAAGCGGTACAACCTTGCAGATGTGTCTGCCGCAGTGTGCATGAGCCTGGGCCTGATCTGGTTTACCCTCGCTGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225568.2 |
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CDS-3UTR CAA 90 bp | GATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCAAAACCATCTCCGAGTaGGAAGCATTGTGCAGTTTC | + |
Preference number: 5 (lower is better) Translates to: DAQGGSINFLQGCSPRLVKTISE*EALCSF Trigger: GAAACTGCACAATGCTTCCAACTCGGAGATGGTTTT...GACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CAA 90 bp | GATGCCCAGGGAGGGAGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCTTGCTTTCCTTCCTGTaGTCACTGTTACAGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: DAQGGSINFLQGCSPRLVLLSFL*SLLQPE Trigger: TTCTGGCTGTAACAGTGACAACAGGAAGGAAAGCAA...GACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCTCCCTCCCTGGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CAA 90 bp | GGAAGCATTGTGCAGTTTCATGGCCTTCTCCTGAACGTTCCCAATGACAGCGTCGGACGGGAAGCAAGGTaGGCCAGAAATCTAACTGGG | + |
Preference number: 5 (lower is better) Translates to: GSIVQFHGLLLNVPNDSVGREAR*ARNLTG Trigger: CCCAGTTAGATTTCTGGCCAACCTTGCTTCCCGTCC...GACGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAAACTGCACAATGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224429.2 |
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CDS GCA 90 bp | CAGCGCCAGGGAGATAAGCATCACACCTGTCAGATTAAAGTTTGGTaGAATTGTGCTGTCAGCGAGGGTAAACCAGATCAGGCCCAGGCT | + |
Preference number: 5 (lower is better) Translates to: QRQGDKHHTCQIKVW*NCAVSEGKPDQAQA Trigger: AGCCTGGGCCTGATCTGGTTTACCCTCGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000224645.2 ENSMUST00000225396.2 ENSMUST00000225432.2 ENSMUST00000225568.2 |
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CDS-3UTR CAA 90 bp | TCACCCAGTCAGTCACTCTGCGTCCGTCATACACTCCCCTTTCATGCAGTCCCAACAGGACAACGGTCATaGCTTTCCTTCCTGTTGTCA | + |
Preference number: 5 (lower is better) Translates to: SPSQSLCVRHTLPFHAVPTGQRS*LSFLLS Trigger: TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGT...TGGGACTGCATGAAAGGGGAGTGTATGACGGACGCAGAGTGACTGACTGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS CCA 90 bp | ACACAGCGCCAGGGAGATAAGCATCACACCTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGCGAGGGTAAACCAGATCAGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: TQRQGDKHHTCQIKV*CNCAVSEGKPDQAQ Trigger: CTGGGCCTGATCTGGTTTACCCTCGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTGGCGCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000224645.2 ENSMUST00000225396.2 ENSMUST00000225432.2 ENSMUST00000225568.2 |
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CDS GCA 90 bp | GTTGAACTTGAGGTCCATTGTTTCTGCTCTGCCACAGTCAAGGCCTaGAACTTGGTCTCTGCTCTTTTCGGATGCTTCGTCCTGTCTTTC | + |
Preference number: 5 (lower is better) Translates to: VELEVHCFCSATVKA*NLVSALFGCFVLSF Trigger: GAAAGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR CAA 90 bp | GCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCGCACTTGAAGATGACTaGGGTTGGGTAATTCAGGTA | + |
Preference number: 5 (lower is better) Translates to: AKEPLDVQSAHLTAAFRSALEDD*GWVIQV Trigger: TACCTGAATTACCCAACCCAAGTCATCTTCAAGTGC...GGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | AGCATCAATTTTCTTCAGGGATGCAGCCCCAGGCTGGTCACATATGCTGTGGGTTCCCAACAGGGTTCTTaGAACAAAATGCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: SINFLQGCSPRLVTYAVGSQQGS*NKMPLQ Trigger: CTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGA...ACCCACAGCATATGTGACCAGCCTGGGGCTGCATCCCTGAAGAAAATTGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CAA 90 bp | TGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCTCCCAACAGGGTTCTTaGAACAAAATGCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: CQGTTGCTICSSDSGLQISQQGS*NKMPLQ Trigger: CTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGA...GATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | GCGCTGCAGGCTGGGAGGATTTCCAATCAGTCTTACAACACGGTCCATTTCCAGTTGCTTTCCTTCCTGTaGTCACTGTTACAGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: ALQAGRISNQSYNTVHFQLLSFL*SLLQPE Trigger: TTCTGGCTGTAACAGTGACAACAGGAAGGAAAGCAA...CTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS GCA 90 bp | GGAGACATACTTCCTGGAGTTGTTGAACTTGAGGTCCATTGTTTCTaGTCTGCCACAGTCAAGGCCTGCAACTTGGTCTCTGCTCTTTTC | + |
Preference number: 5 (lower is better) Translates to: GDILPGVVELEVHCF*SATVKACNLVSALF Trigger: GAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CCA 90 bp | TCTTTAAACACGCGGACGGGAAGCAAGGTTGGCCAGAAATCTAACTaGGCTGTCAGATTAAAGTTTGGTGCAATTGTGCTGTCAGCGAGG | + |
Preference number: 5 (lower is better) Translates to: SLNTRTGSKVGQKSN*AVRLKFGAIVLSAR Trigger: CCTCGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGCCCAGTTAGATTTCTGGCCAACCTTGCTTCCCGTCCGCGTGTTTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224429.2 |
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CDS-3UTR CAA 90 bp | GCGCTGCAGGCTGGGAGGATTTCCAATCAGTCTTACAACACGGTCCATTTCCAGACATACTTCCTGGAGTaGTTGAACTTGAGGTCCATT | + |
Preference number: 5 (lower is better) Translates to: ALQAGRISNQSYNTVHFQTYFLE*LNLRSI Trigger: AATGGACCTCAAGTTCAACAACTCCAGGAAGTATGT...CTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR CAA 90 bp | TGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCTTGCTTTCCTTCCTGTaGTCACTGTTACAGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: CQGTTGCTICSSDSGLQILLSFL*SLLQPE Trigger: TTCTGGCTGTAACAGTGACAACAGGAAGGAAAGCAA...GATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | GAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTACAGGACAACGGTCATaGCTTTCCTTCCTGTTGTCA | + |
Preference number: 5 (lower is better) Translates to: EPLDVQSAHLTAAFRSFGTGQRS*LSFLLS Trigger: TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGT...ACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | GGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATAACAGGAATCAGTTaGCAGCACTTGAAGATGACT | + |
Preference number: 5 (lower is better) Translates to: GCQGTTGCTICSSDSGLQITGIS*QHLKMT Trigger: AGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTAT...CTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCTTGCTTTCCTTCCTGTaGTCACTGTTACAGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: CRGGCQGTTGCTICSSDSLLSFL*SLLQPE Trigger: TTCTGGCTGTAACAGTGACAACAGGAAGGAAAGCAA...GCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACACAGGACAACGGTCATaGCTTTCCTTCCTGTTGTCA | + |
Preference number: 5 (lower is better) Translates to: FCRGGCQGTTGCTICSSDTGQRS*LSFLLS Trigger: TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGT...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACGCACTTGAAGATGACTaGGGTTGGGTAATTCAGGTA | + |
Preference number: 5 (lower is better) Translates to: FCRGGCQGTTGCTICSSDALEDD*GWVIQV Trigger: TACCTGAATTACCCAACCCAAGTCATCTTCAAGTGC...GTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TGCCAAGGAACCACTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 5 (lower is better) Translates to: CQGTTGCTICSSDSGLQICTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...GATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | GTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTAAAACCATCTCCGAGTaGGAAGCATTGTGCAGTTTC | + |
Preference number: 5 (lower is better) Translates to: VFCRGGCQGTTGCTICSSKTISE*EALCSF Trigger: GAAACTGCACAATGCTTCCAACTCGGAGATGGTTTT...AGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | CATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCATCCCAACAGGGTTCTTaGAACAAAATGCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: HLELIKSLYSVEVDAKEPSQQGS*NKMPLQ Trigger: CTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGA...TGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | CTGGATGTACAATCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATTACTTCCTGGAGTTGTaGAACTTGAGGTCCATTGTT | + |
Preference number: 5 (lower is better) Translates to: LDVQSAHLTAAFRSFGLYYFLEL*NLRSIV Trigger: AACAATGGACCTCAAGTTCAACAACTCCAGGAAGTA...ATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTACATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS-3UTR CAA 90 bp | TCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGATAACAGGAATCAGTTaGCAGCACTTGAAGATGACT | + |
Preference number: 5 (lower is better) Translates to: SAHLTAAFRSFGLYHKPLITGIS*QHLKMT Trigger: AGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTAT...CAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | ATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAAAAAACCATCTCCGAGTaGGAAGCATTGTGCAGTTTC | + |
Preference number: 5 (lower is better) Translates to: IKSLYSVEVDAKEPLDVQKTISE*EALCSF Trigger: GAAACTGCACAATGCTTCCAACTCGGAGATGGTTTT...TTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATACAGGCTTTTGAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TCTGCTCATCTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 5 (lower is better) Translates to: SAHLTAAFRSFGLYHKPLCTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...CAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | CCTGGAGGAACATGGCTTACCTGTTTTATCTTTCTGGCCTGCGTAGGTAGCTTTTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 5 (lower is better) Translates to: PGGTWLTCFIFLACVGSFCTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...AAAGCTACCTACGCAGGCCAGAAAGATAAAACAGGTAAGCCATGTTCCTCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225396.2 |
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CDS-3UTR CAA 90 bp | CTTGATCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGTCCCAACAGGGTTCTTaGAACAAAATGCCACTGCAG | + |
Preference number: 5 (lower is better) Translates to: LDHLELIKSLYSVEVDAKSQQGS*NKMPLQ Trigger: CTGCAGTGGCATTTTGTTCAAAGAACCCTGTTGGGA...CTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | CTTGATCATTTGGAGTTGATCAAAAGCCTGTATTCTGTAGAGGTGGATGCCAAGACAGGACAACGGTCATaGCTTTCCTTCCTGTTGTCA | + |
Preference number: 5 (lower is better) Translates to: LDHLELIKSLYSVEVDAKTGQRS*LSFLLS Trigger: TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGT...CTTGGCATCCACCTCTACAGAATACAGGCTTTTGATCAACTCCAAATGATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | CTGACAGCGGCCTTCAGATCCTTTGGTTTGTATCACAAGCCTTTGCAAAGTGAAATAACAGGAATCAGTTaGCAGCACTTGAAGATGACT | + |
Preference number: 5 (lower is better) Translates to: LTAAFRSFGLYHKPLQSEITGIS*QHLKMT Trigger: AGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTAT...TTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | GTATTCTGTAGAGGTGGATGCCAAGGAACCACTGGATGTACAATCTGCTCATCTTGTACACAAACCCGATaGAGTAGGAATACAAAACCA | + |
Preference number: 5 (lower is better) Translates to: VFCRGGCQGTTGCTICSSCTQTR*SRNTKP Trigger: TGGTTTTGTATTCCTACTCAATCGGGTTTGTGTACA...AGATGAGCAGATTGTACATCCAGTGGTTCCTTGGCATCCACCTCTACAGAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS TCA 90 bp | TTGAGAAATATGCCAAGGACAACTAACAAGCCAGACCATATATACTaGAAAGTGAACGGCTTAGCAAAGAACAGGAAGGACAGGACAACG | + |
Preference number: 5 (lower is better) Translates to: LRNMPRTTNKPDHIY*KVNGLAKNRKDRTT Trigger: CGTTGTCCTGTCCTTCCTGTTCTTTGCTAAGCCGTTCACTTTTCAGTATATATGGTCTGGCTTGTTAGTTGTCCTTGGCATATTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |
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CDS-3UTR CAA 90 bp | TCCAGTGAAATGTTCAGAACATTGCTAGGAAGCACTTTCCTTCATACTGACTTTCTGGAGTTGTTGAACTaGAGGTCCATTGTTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: SSEMFRTLLGSTFLHTDFLELLN*RSIVSA Trigger: AGCAGAAACAATGGACCTCAAGTTCAACAACTCCAG...AAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS TCA 72 bp | GGTTCACGCCCAGCACCACGACGTCCTCAACTGACTTaGTGTGCGGCGACATGGCCTGCGTTTTGGAGGGCA | + |
Preference number: 6 (lower is better) Translates to: GSRPAPRRPQLT*CAATWPAFWRA Trigger: TGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGTGGTGCTGGGCGTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS GCA 72 bp | ACGCCCAGCACCACGACGTCCTCAACTGACTTGATGTaGGGCGACATGGCCTGCGTTTTGGAGGGCACTGAG | + |
Preference number: 6 (lower is better) Translates to: TPSTTTSSTDLM*GDMACVLEGTE Trigger: CTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGTGGTGCTGGGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS CAA 90 bp | AACTTGCTGAGGTTCACGCCCAGCACCACGACGTCCTCAACTGACTaGATGTGCGGCGACATGGCCTGCGTTTTGGAGGGCACTGAGATG | + |
Preference number: 6 (lower is better) Translates to: NLLRFTPSTTTSSTD*MCGDMACVLEGTEM Trigger: CATCTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAGCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS GCA 72 bp | ACGTCCTCAACTGACTTGATGTGCGGCGACATGGCCTaGGTTTTGGAGGGCACTGAGATGGAGACATACTTC | + |
Preference number: 6 (lower is better) Translates to: TSSTDLMCGDMA*VLEGTEMETYF Trigger: GAAGTATGTCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS CAA 90 bp | ACGACGTCCTCAACTGACTTGATGTGCGGCGACATGGCCTGCGTTTaGGAGGGCACTGAGATGGAGACATACTTCCTGGAGTTGTTGAAC | + |
Preference number: 6 (lower is better) Translates to: TTSSTDLMCGDMACV*EGTEMETYFLELLN Trigger: GTTCAACAACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS GCA 72 bp | CTGCTCTGCCACAGTCAAGGCCTGCAACTTGGTCTCTaGTCTTTTCGGATGCTTCGTCCTGTCTTTCTTCTG | + |
Preference number: 6 (lower is better) Translates to: LLCHSQGLQLGL*SFRMLRPVFLL Trigger: CAGAAGAAAGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CAA 90 bp | GCCTGCGTTTTGGAGGGCACTGAGATGGAGACATACTTCCTGGAGTaGTTGAACTTGAGGTCCATTGTTTCTGCTCTGCCACAGTCAAGG | + |
Preference number: 6 (lower is better) Translates to: ACVLEGTEMETYFLE*LNLRSIVSALPQSR Trigger: CCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTCCAAAACGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CAA 90 bp | AAAACTCCAGCCACACAGATGAGAAACTGTGTGAGCTTGCTAAACTaGCTGAGGTTCACGCCCAGCACCACGACGTCCTCAACTGACTTG | + |
Preference number: 6 (lower is better) Translates to: KTPATQMRNCVSLLN*LRFTPSTTTSSTDL Trigger: CAAGTCAGTTGAGGACGTCGTGGTGCTGGGCGTGAACCTCAGCAAGTTTAGCAAGCTCACACAGTTTCTCATCTGTGTGGCTGGAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS TCA 72 bp | CTGCAAGGTTGTACCGCTTTCCTTCTCCTTCTGTCCTaGGTGAGCTGTAGCTCGATTAGGCCAAATACGGAG | + |
Preference number: 6 (lower is better) Translates to: LQGCTAFLLLLS*VSCSSIRPNTE Trigger: CTCCGTATTTGGCCTAATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAGGAAAGCGGTACAACCTTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225461.2 ENSMUST00000225714.2 |
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CDS CAA 72 bp | CATTGTTTCTGCTCTGCCACAGTCAAGGCCTGCAACTaGGTCTCTGCTCTTTTCGGATGCTTCGTCCTGTCT | + |
Preference number: 6 (lower is better) Translates to: HCFCSATVKACN*VSALFGCFVLS Trigger: AGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAGAAACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CCA 72 bp | ATTGTTTCTGCTCTGCCACAGTCAAGGCCTGCAACTTaGTCTCTGCTCTTTTCGGATGCTTCGTCCTGTCTT | + |
Preference number: 6 (lower is better) Translates to: IVSALPQSRPAT*SLLFSDASSCL Trigger: AAGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAGAAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CCA 72 bp | ACGCGGACGGGAAGCAAGGTTGGCCAGAAATCTAACTaGGCTGTCAGATTAAAGTTTGGTGCAATTGTGCTG | + |
Preference number: 6 (lower is better) Translates to: TRTGSKVGQKSN*AVRLKFGAIVL Trigger: CAGCACAATTGCACCAAACTTTAATCTGACAGCCCAGTTAGATTTCTGGCCAACCTTGCTTCCCGTCCGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224429.2 |
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CDS CAA 72 bp | GAGGGCACTGAGATGGAGACATACTTCCTGGAGTTGTaGAACTTGAGGTCCATTGTTTCTGCTCTGCCACAG | + |
Preference number: 6 (lower is better) Translates to: EGTEMETYFLEL*NLRSIVSALPQ Trigger: CTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCTCAGTGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CAA 72 bp | ACTGAGATGGAGACATACTTCCTGGAGTTGTTGAACTaGAGGTCCATTGTTTCTGCTCTGCCACAGTCAAGG | + |
Preference number: 6 (lower is better) Translates to: TEMETYFLELLN*RSIVSALPQSR Trigger: CCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021870.12 |
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CDS CCA 72 bp | CAGGGAGATAAGCATCACACCTGTCAGATTAAAGTTTaGTGCAATTGTGCTGTCAGCGAGGGTAAACCAGAT | + |
Preference number: 6 (lower is better) Translates to: QGDKHHTCQIKV*CNCAVSEGKPD Trigger: ATCTGGTTTACCCTCGCTGACAGCACAATTGCACCAAACTTTAATCTGACAGGTGTGATGCTTATCTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000224645.2 ENSMUST00000225396.2 ENSMUST00000225432.2 ENSMUST00000225568.2 |
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CDS TCA 72 bp | AGGTTTTTCCTGGTATTCTTCTCCTTCTGTCCTGAGTaGGCTGTAGCTCGATTAGGCCAAATACGGAGTAAA | + |
Preference number: 6 (lower is better) Translates to: RFFLVFFSFCPE*AVARLGQIRSK Trigger: TTTACTCCGTATTTGGCCTAATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAGAATACCAGGAAAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225331.2 ENSMUST00000225432.2 |
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CDS CAA 72 bp | CATAACAGGAATCAGTTTGCAGCACTTGAAGATGACTaGGGTTGGGTAATTCAGGTAGCCCAAGGAAGTGTT | + |
Preference number: 6 (lower is better) Translates to: HNRNQFAALEDD*GWVIQVAQGSV Trigger: AACACTTCCTTGGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 ENSMUST00000225568.2 |
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CDS TCA 72 bp | ATGCCAAGGACAACTAACAAGCCAGACCATATATACTaGAAAGTGAACGGCTTAGCAAAGAACAGGAAGGAC | + |
Preference number: 6 (lower is better) Translates to: MPRTTNKPDHIY*KVNGLAKNRKD Trigger: GTCCTTCCTGTTCTTTGCTAAGCCGTTCACTTTTCAGTATATATGGTCTGGCTTGTTAGTTGTCCTTGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021870.12 ENSMUST00000167513.3 ENSMUST00000225432.2 |