Pregenerated sensors for SLC35B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020873Ensembl transcript IDs: ENSMUST00000021243.16, ENSMUST00000131193.3, ENSMUST00000146556.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGACCCAAGGCACTGGTCAGGCCAAAGAGCAGGATGTTATAGATaGTGGTCGGGTACCTCTCGGCGAAGCTCAAGAACTCCCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: SDPRHWSGQRAGCYR*WSGTSRRSSRTPRA Trigger: AGCTCTGGGAGTTCTTGAGCTTCGCCGAGAGGTACCCGACCATCATCTATAACATCCTGCTCTTTGGCCTGACCAGTGCCTTGGGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CCA 90 bp | CTCTTTCTTCCTAGTGGGAGGTCTTCTTTGTTCCTTTCCCAAACTTaGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTGCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: LFLPSGRSSLFLSQT*HQDRDPGKPARCPP Trigger: GGGTGGGCACCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAAAGAAGACCTCCCACTAGGAAGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR TCA 90 bp | CAACAGTGTGCTCTTCTATTCCAACCACCTTCTTGGGCTTATACATaGAAAGAGCCACGCCAGCCACAATTAGCAATACACACAGGTACT | + |
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Preference number: 1 (lower is better) Translates to: QQCALLFQPPSWAYT*KEPRQPQLAIHTGT Trigger: AGTACCTGTGTGTATTGCTAATTGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCACACTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR GCA 90 bp | AGGGTCAGAGACATGAGCAGAAGAAGCTCTCCAAAGCCAACAGTGTaGTCTTCTATTCCAACCACCTTCTTGGGCTTATACATGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: RVRDMSRRSSPKPTV*SSIPTTFLGLYMKR Trigger: TCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCACACTGTTGGCTTTGGAGAGCTTCTTCTGCTCATGTCTCTGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGGGTTGTGGTGATGATGGAGCAGGTCAGGGGACCGAAGTACACGACTGTGCCCGCATATGGTCCTaGGAAACACCTGTCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPGCGDDGAGQGTEVHDCARIWS*ETPVSP Trigger: TGGACTGACAGGTGTTTCCCAGGACCATATGCGGGC...ACAGTCGTGTACTTCGGTCCCCTGACCTGCTCCATCATCACCACAACCCGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTGCCCACCAGGGTCAGAGACATaGGCAGAAGAAGCTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSQTWHQDRDPGKPARCPPGSET*AEEALQ Trigger: TTGGAGAGCTTCTTCTGCTCATGTCTCTGACCCTGG...TGGGCACCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCAAGAACTCCCAGAGCTCCCCAGTAAACAGGATCCCAGCACCAAGCAAGAACCCAATCCCTTATCATaGCCCGAGTCCATTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: AQELPELPSKQDPSTKQEPNPLS*PESIFP Trigger: TGGGAAAATGGACTCGGGTCATGATAAGGGATTGGG...TTCTTGCTTGGTGCTGGGATCCTGTTTACTGGGGAGCTCTGGGAGTTCTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGGCAGGATGTTATAGATaGTGGTCGGGTACCTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: LFLSQTWHQDRDPGKPARAGCYR*WSGTSR Trigger: CCGAGAGGTACCCGACCATCATCTATAACATCCTGC...CCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 90 bp | CGTGGACCAAAGGTTGATGTTCAACATCATGTGGTTGGAACCTGTTaGGTAATGAGCCCGCATATGGTCCTGGGAAACACCTGTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RGPKVDVQHHVVGTC*VMSPHMVLGNTCQS Trigger: GGACTGACAGGTGTTTCCCAGGACCATATGCGGGCTCATTACCAAACAGGTTCCAACCACATGATGTTGAACATCAACCTTTGGTCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTGCCCATCAACATCATGTGGTTaGAACCTGTTTGGTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LSQTWHQDRDPGKPARCPSTSCG*NLFGNE Trigger: CTCATTACCAAACAGGTTCCAACCACATGATGTTGA...TGGGCACCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 90 bp | TTCTGGAGTAGAGGAAGCCTCTTTCTTCCTAGTGGGAGGTCTTCTTaGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FWSRGSLFLPSGRSS*FLSQTWHQDRDPGK Trigger: TTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAAAGAAGACCTCCCACTAGGAAGAAAGAGGCTTCCTCTACTCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTATACACACAGGTACTTaGCCAGCGGGTACTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: WNPIPYHDPSPFSQDATVIHTGT*PAGTSS Trigger: AGAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTAT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 90 bp | AGCTCTCCAAAGCCAACAGTGTGCTCTTCTATTCCAACCACCTTCTaGGGCTTATACATGAAAAGAGCCACGCCAGCCACAATTAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSPKPTVCSSIPTTF*GLYMKRATPATISN Trigger: ATTGCTAATTGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCACACTGTTGGCTTTGGAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR GCA 72 bp | CCGAGACCCAGGAAAACCAGCACGGTGCCCACCCACTaGATGGAGCTGATGGGGTTGGCAAAGAGGATCACA | + |
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Preference number: 3 (lower is better) Translates to: PRPRKTSTVPTH*MELMGLAKRIT Trigger: TGTGATCCTCTTTGCCAACCCCATCAGCTCCATGCAGTGGGTGGGCACCGTGCTGGTTTTCCTGGGTCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CAA 90 bp | CGGGTTGTGGTGATGATGGAGCAGGTCAGGGGACCGAAGTACACGACTGTCATGATTCCAACCACCTTCTaGGGCTTATACATGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RVVVMMEQVRGPKYTTVMIPTTF*GLYMKR Trigger: TCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAAT...CATGACAGTCGTGTACTTCGGTCCCCTGACCTGCTCCATCATCACCACAACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGAACGTGGACCAAAGGTaGATGTTCAACATCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LFLSQTWHQDRDPGKPARNVDQR*MFNIMW Trigger: CCACATGATGTTGAACATCAACCTTTGGTCCACGTT...CCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR TCA 72 bp | GGATCCCAGCACCAAGCAAGAACGTGGACCAAAGGTTaGTGTTCAACATCATGTGGTTGGAACCTGTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: GSQHQARTWTKG*CSTSCGWNLFG Trigger: ACCAAACAGGTTCCAACCACATGATGTTGAACATCAACCTTTGGTCCACGTTCTTGCTTGGTGCTGGGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR-3UTR CAA 90 bp | TGCTCTTCTATTCCAACCACCTTCTTGGGCTTATACATGAAAAGAGCCACGCCAAATACACACAGGTACTaGGCCAGCGGGTACTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CSSIPTTFLGLYMKRATPNTHRY*ASGYFF Trigger: GAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTATT...TGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR GCA 72 bp | GACATGAGCAGAAGAAGCTCTCCAAAGCCAACAGTGTaGTCTTCTATTCCAACCACCTTCTTGGGCTTATAC | + |
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Preference number: 3 (lower is better) Translates to: DMSRRSSPKPTV*SSIPTTFLGLY Trigger: GTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCACACTGTTGGCTTTGGAGAGCTTCTTCTGCTCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR TCA 72 bp | GCTCTTCTATTCCAACCACCTTCTTGGGCTTATACATaGAAAGAGCCACGCCAGCCACAATTAGCAATACAC | + |
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Preference number: 3 (lower is better) Translates to: ALLFQPPSWAYT*KEPRQPQLAIH Trigger: GTGTATTGCTAATTGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR TCA 90 bp | GTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTGGACAAACTGCAGGGCTaGGTTGCTGGAGACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: VPFPNLASRPRPRKTSTVDKLQG*VAGDHG Trigger: GCCATGGTCTCCAGCAACTCAGCCCTGCAGTTTGTC...CACCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR GCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTACGGTGCCCACCCACTaGATGGAGCTGATGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVTVPTH*MELMGL Trigger: CAACCCCATCAGCTCCATGCAGTGGGTGGGCACCGT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR GCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTGGAAAACCAGCACGGTaGCCACCCACTGCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVGKPAR*PPTAWS Trigger: GCTCCATGCAGTGGGTGGGCACCGTGCTGGTTTTCC...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR GCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTACTGCAGGGCTGAGTTaGTGGAGACCATGGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVTAGLS*WRPWHP Trigger: TGGGTGCCATGGTCTCCAGCAACTCAGCCCTGCAGT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | GCAGAAGAAGCTCTCCAAAGCCAACAGTGTGCTCTTCTATTCCAACCACCTTCTGCAGGGCTGAGTTGCTaGAGACCATGGCACCCACAT | + |
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Preference number: 4 (lower is better) Translates to: AEEALQSQQCALLFQPPSAGLSC*RPWHPH Trigger: ATGTGGGTGCCATGGTCTCCAGCAACTCAGCCCTGC...AGAAGGTGGTTGGAATAGAAGAGCACACTGTTGGCTTTGGAGAGCTTCTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTGCCCGCATATGGTCCTaGGAAACACCTGTCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVARIWS*ETPVSP Trigger: TGGACTGACAGGTGTTTCCCAGGACCATATGCGGGC...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR TCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTCCAGGGTCAGAGACATaGGCAGAAGAAGCTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVPGSET*AEEALQ Trigger: TTGGAGAGCTTCTTCTGCTCATGTCTCTGACCCTGG...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR TCA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTGCAGGATGTTATAGATaGTGGTCGGGTACCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WNPIPYHDPSPFSQDATVAGCYR*WSGTSR Trigger: CCGAGAGGTACCCGACCATCATCTATAACATCCTGC...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CCA 90 bp | TTGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTCCCAGGAGCATAACTaGGATTGGCTTGCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LFLSQTWHQDRDPGKPARSQEHN*DWLAGF Trigger: AAATCCTGCAAGCCAATCCCAGTTATGCTCCTGGGA...CCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR GCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGAGAGCCAGGTCCGAGTaGGATCCACCCTGGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKRARSE*DPPWQC Trigger: ACACTGCCAGGGTGGATCGCACTCGGACCTGGCTCT...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR GCA 90 bp | AATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCTTCCTAGTGGGAGGTCTTACTGCAGGGCTGAGTTaGTGGAGACCATGGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: NLSVSGVEEASFFLVGGLTAGLS*WRPWHP Trigger: TGGGTGCCATGGTCTCCAGCAACTCAGCCCTGCAGT...AAGACCTCCCACTAGGAAGAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 72 bp | AAGCCAACAGTGTGCTCTTCTATTCCAACCACCTTCTaGGGCTTATACATGAAAAGAGCCACGCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: KPTVCSSIPTTF*GLYMKRATPAT Trigger: TGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGAAGAGCACACTGTTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 72 bp | AGGATCCCAGCACCAAGCAAGAACGTGGACCAAAGGTaGATGTTCAACATCATGTGGTTGGAACCTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RIPAPSKNVDQR*MFNIMWLEPVW Trigger: CCAAACAGGTTCCAACCACATGATGTTGAACATCAACCTTTGGTCCACGTTCTTGCTTGGTGCTGGGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| 3UTR CAA 72 bp | AGAGGAAGCCTCTTTCTTCCTAGTGGGAGGTCTTCTTaGTTCCTTTCCCAAACTTGGCATCAAGACCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGSLFLPSGRSS*FLSQTWHQDRD Trigger: GTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAAAGAAGACCTCCCACTAGGAAGAAAGAGGCTTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR TCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGGACAAACTGCAGGGCTaGGTTGCTGGAGACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKDKLQG*VAGDHG Trigger: GCCATGGTCTCCAGCAACTCAGCCCTGCAGTTTGTC...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGGCAGGGCTGAGTTGCTaGAGACCATGGCACCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKAGLSC*RPWHPH Trigger: ATGTGGGTGCCATGGTCTCCAGCAACTCAGCCCTGC...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TCTATTCCAACCACCTTCTTGGGCTTATACATGAAAAGAGCCACGCCAGCCACAGAGCATAACTGGGATTaGCTTGCAGGATTTACCGAG | + |
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Preference number: 4 (lower is better) Translates to: SIPTTFLGLYMKRATPATEHNWD*LAGFTE Trigger: CTCGGTAAATCCTGCAAGCCAATCCCAGTTATGCTC...TGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | GTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTGGCATTGATCACACACTaGATGAAAACCAAAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: VPFPNLASRPRPRKTSTVALITH*MKTKVK Trigger: CTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGC...CACCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TCTATTCCAACCACCTTCTTGGGCTTATACATGAAAAGAGCCACGCCAGCCACAACCGAGAACCTGAGTTaGATAGTTGACAAACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SIPTTFLGLYMKRATPATTENLS*IVDKLQ Trigger: CTGCAGTTTGTCAACTATCCAACTCAGGTTCTCGGT...TGTGGCTGGCGTGGCTCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCTCTGACCCAAGGCACTaGTCAGGCCAAAGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ATVRDNNLSVSGVEEASFSDPRH*SGQRAG Trigger: TCCTGCTCTTTGGCCTGACCAGTGCCTTGGGTCAGA...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| 3UTR CAA 72 bp | AAGGTTGATGTTCAACATCATGTGGTTGGAACCTGTTaGGTAATGAGCCCGCATATGGTCCTGGGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: KVDVQHHVVGTC*VMSPHMVLGNT Trigger: GGTGTTTCCCAGGACCATATGCGGGCTCATTACCAAACAGGTTCCAACCACATGATGTTGAACATCAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGAGTTGCTGGAGACCATaGCACCCACATAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKSCWRP*HPHRRQ Trigger: CTGTCTCCTATGTGGGTGCCATGGTCTCCAGCAACT...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGGAGCATAACTGGGATTaGCTTGCAGGATTTACCGAG | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKEHNWD*LAGFTE Trigger: CTCGGTAAATCCTGCAAGCCAATCCCAGTTATGCTC...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGTCCCAGGAGCATAACTaGGATTGGCTTGCAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKSQEHN*DWLAGF Trigger: AAATCCTGCAAGCCAATCCCAGTTATGCTCCTGGGA...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCATACACACAGGTACTTaGCCAGCGGGTACTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ATVRDNNLSVSGVEEASFIHTGT*PAGTSS Trigger: AGAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTAT...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CCA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCTTCCTTTCCCAAACTTaGCATCAAGACCGAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: ATVRDNNLSVSGVEEASFFLSQT*HQDRDP Trigger: TGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAA...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR TCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGACGTGGACCAAAGGTTaGTGTTCAACATCATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKTWTKG*CSTSCG Trigger: ACCACATGATGTTGAACATCAACCTTTGGTCCACGT...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGACCGAGAACCTGAGTTaGATAGTTGACAAACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKTENLS*IVDKLQ Trigger: CTGCAGTTTGTCAACTATCCAACTCAGGTTCTCGGT...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CCA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCTCAACATCATGTGGTTaGAACCTGTTTGGTAATGAG | + |
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Preference number: 4 (lower is better) Translates to: ATVRDNNLSVSGVEEASFSTSCG*NLFGNE Trigger: CTCATTACCAAACAGGTTCCAACCACATGATGTTGA...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGGCATTGATCACACACTaGATGAAAACCAAAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKALITH*MKTKVK Trigger: CTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGC...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS TCA 90 bp | GGATTTACCGAGAACCTGAGTTGGATAGTTGACAAACTGCAGGGCTaGGTTGCTGGAGACCATGGCACCCACATAGGAGACAGAACAGGC | + |
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Preference number: 5 (lower is better) Translates to: GFTENLSWIVDKLQG*VAGDHGTHIGDRTG Trigger: GCCTGTTCTGTCTCCTATGTGGGTGCCATGGTCTCCAGCAACTCAGCCCTGCAGTTTGTCAACTATCCAACTCAGGTTCTCGGTAAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGGTGAATGTCTCCTGTTaGGGTCCTTCTCCATACTTC | + |
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Preference number: 5 (lower is better) Translates to: LFLSQTWHQDRDPGKPARVNVSC*GPSPYF Trigger: GAAGTATGGAGAAGGACCCAAACAGGAGACATTCAC...CCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CAA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTAATACACACAGGTACTaGGCCAGCGGGTACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: WNPIPYHDPSPFSQDATVNTHRY*ASGYFF Trigger: GAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTATT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CAA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTGTGAATGTCTCCTGTTaGGGTCCTTCTCCATACTTC | + |
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Preference number: 5 (lower is better) Translates to: WNPIPYHDPSPFSQDATVVNVSC*GPSPYF Trigger: GAAGTATGGAGAAGGACCCAAACAGGAGACATTCAC...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CAA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTATAACTGGGATTGGCTaGCAGGATTTACCGAGAACC | + |
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Preference number: 5 (lower is better) Translates to: WNPIPYHDPSPFSQDATVITGIG*QDLPRT Trigger: GGTTCTCGGTAAATCCTGCAAGCCAATCCCAGTTAT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS-3UTR CAA 90 bp | TTGTTCCTTTCCCAAACTTGGCATCAAGACCGAGACCCAGGAAAACCAGCACGGTTGGCAAACATAGCATaGATCACACACTGGATGAAA | + |
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Preference number: 5 (lower is better) Translates to: LFLSQTWHQDRDPGKPARLANIA*ITHWMK Trigger: TTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAA...CCGTGCTGGTTTTCCTGGGTCTCGGTCTTGATGCCAAGTTTGGGAAAGGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131193.3 |
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| CDS-3UTR CAA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTAACGTGGACCAAAGGTaGATGTTCAACATCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: WNPIPYHDPSPFSQDATVNVDQR*MFNIMW Trigger: CCACATGATGTTGAACATCAACCTTTGGTCCACGTT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CAA 90 bp | TGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGATGCCACTGTTATTCCAACCACCTTCTaGGGCTTATACATGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: WNPIPYHDPSPFSQDATVIPTTF*GLYMKR Trigger: TCTTTTCATGTATAAGCCCAAGAAGGTGGTTGGAAT...AACAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CAA 90 bp | TATAAAAAGATTGGAACCCAATCCCTTATCATGACCCGAGTCCATTTTCCCAAGGTGGTTGGAACCTGTTaGGTAATGAGCCCGCATATG | + |
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Preference number: 5 (lower is better) Translates to: YKKIGTQSLIMTRVHFPKVVGTC*VMSPHM Trigger: CATATGCGGGCTCATTACCAAACAGGTTCCAACCAC...CTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTCCAATCTTTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS CCA 90 bp | AGTGCGATCCACCAGATCTTGGCAAACATAGCATTGATCACACACTaGATGAAAACCAAAGTTAAGGCAAAGGTGAATGTCTCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SAIHQILANIALITH*MKTKVKAKVNVSCL Trigger: CAAACAGGAGACATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTGGTGGATCGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS-3UTR CAA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCAGTGGGAGGTCTTCTTaGTTCCTTTCCCAAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: ATVRDNNLSVSGVEEASFSGRSS*FLSQTW Trigger: CCAAGTTTGGGAAAGGAACAAAGAAGACCTCCCACT...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS-3UTR CAA 90 bp | GCCACTGTTCGAGATAATAATTTAAGTGTTTCTGGAGTAGAGGAAGCCTCTTTCTTGGCAAACATAGCATaGATCACACACTGGATGAAA | + |
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Preference number: 5 (lower is better) Translates to: ATVRDNNLSVSGVEEASFLANIA*ITHWMK Trigger: TTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAA...GAAAGAGGCTTCCTCTACTCCAGAAACACTTAAATTATTATCTCGAACAGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 |
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| CDS CCA 90 bp | AAAAACTGGATCAAGATCTTGGCAAACATAGCATTGATCACACACTaGATGAAAACCAAAGTTAAGGCAAAGGTGAATGTCTCCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KNWIKILANIALITH*MKTKVKAKVNVSCL Trigger: CAAACAGGAGACATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTTGATCCAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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| CDS TCA 72 bp | GAGAACCTGAGTTGGATAGTTGACAAACTGCAGGGCTaGGTTGCTGGAGACCATGGCACCCACATAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ENLSWIVDKLQG*VAGDHGTHIGD Trigger: GTCTCCTATGTGGGTGCCATGGTCTCCAGCAACTCAGCCCTGCAGTTTGTCAACTATCCAACTCAGGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS CCA 72 bp | CCACGCCAGCCACAATTAGCAATACACACAGGTACTTaGCCAGCGGGTACTTCTTCTTCAAGAGCGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: PRQPQLAIHTGT*PAGTSSSRASL Trigger: GAGTGACGCTCTTGAAGAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTATTGCTAATTGTGGCTGGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000146556.2 |
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| CDS CAA 72 bp | GCCACGCCAGCCACAATTAGCAATACACACAGGTACTaGGCCAGCGGGTACTTCTTCTTCAAGAGCGTCACT | + |
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Preference number: 6 (lower is better) Translates to: ATPATISNTHRY*ASGYFFFKSVT Trigger: AGTGACGCTCTTGAAGAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTATTGCTAATTGTGGCTGGCGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000146556.2 |
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| CDS CAA 90 bp | ATGAAAAGAGCCACGCCAGCCACAATTAGCAATACACACAGGTACTaGGCCAGCGGGTACTTCTTCTTCAAGAGCGTCACTCCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: MKRATPATISNTHRY*ASGYFFFKSVTPRS Trigger: GCTCCTGGGAGTGACGCTCTTGAAGAAGAAGTACCCGCTGGCCAAGTACCTGTGTGTATTGCTAATTGTGGCTGGCGTGGCTCTTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000146556.2 |
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| CDS TCA 72 bp | GCTTGCAGGATTTACCGAGAACCTGAGTTGGATAGTTaGCAAACTGCAGGGCTGAGTTGCTGGAGACCATGG | + |
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Preference number: 6 (lower is better) Translates to: ACRIYREPELDS*QTAGLSCWRPW Trigger: CCATGGTCTCCAGCAACTCAGCCCTGCAGTTTGTCAACTATCCAACTCAGGTTCTCGGTAAATCCTGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021243.16 ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS CAA 90 bp | CACTGGATGAAAACCAAAGTTAAGGCAAAGGTGAATGTCTCCTGTTaGGGTCCTTCTCCATACTTCCCTCTTGTGGGACGAGTCGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: HWMKTKVKAKVNVSC*GPSPYFPLVGRVGR Trigger: TCGGCCGACTCGTCCCACAAGAGGGAAGTATGGAGAAGGACCCAAACAGGAGACATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146556.2 |
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| CDS CCA 72 bp | CTTCAAGAGCGTCACTCCCAGGAGCATAACTGGGATTaGCTTGCAGGATTTACCGAGAACCTGAGTTGGATA | + |
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Preference number: 6 (lower is better) Translates to: LQERHSQEHNWD*LAGFTENLSWI Trigger: TATCCAACTCAGGTTCTCGGTAAATCCTGCAAGCCAATCCCAGTTATGCTCCTGGGAGTGACGCTCTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021243.16 ENSMUST00000146556.2 |
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| CDS CAA 90 bp | GAGCCAGGTCCGAGTGCGATCCACCAGATCTTGGCAAACATAGCATaGATCACACACTGGATGAAAACCAAAGTTAAGGCAAAGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: EPGPSAIHQILANIA*ITHWMKTKVKAKVN Trigger: ATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTGGTGGATCGCACTCGGACCTGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS CAA 72 bp | CCGAGTGCGATCCACCAGATCTTGGCAAACATAGCATaGATCACACACTGGATGAAAACCAAAGTTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSAIHQILANIA*ITHWMKTKVKA Trigger: TGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTGGTGGATCGCACTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS CCA 72 bp | CACCAGATCTTGGCAAACATAGCATTGATCACACACTaGATGAAAACCAAAGTTAAGGCAAAGGTGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: HQILANIALITH*MKTKVKAKVNV Trigger: GACATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131193.3 ENSMUST00000146556.2 |
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| CDS CCA 72 bp | ATCAAGATCTTGGCAAACATAGCATTGATCACACACTaGATGAAAACCAAAGTTAAGGCAAAGGTGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: IKILANIALITH*MKTKVKAKVNV Trigger: GACATTCACCTTTGCCTTAACTTTGGTTTTCATCCAGTGTGTGATCAATGCTATGTTTGCCAAGATCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021243.16 |
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