Pregenerated sensors for SLC35A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033272Ensembl transcript IDs: ENSMUST00000036158.7, ENSMUST00000050476.11, ENSMUST00000185899.2, ENSMUST00000186538.7
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTCTGTGGAGGGGGCAAACTAAGCATCTTTATATGGAAGTCATaGTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: QLCGGGKLSIFIWKS*WAGAASTKLRDRVF Trigger: GAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCCCCTCCACAGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR GCA 90 bp | TTCAGGAGTGCAGTTAGGCGTTTCCTTAACCAAGCCCACTCTTTATaGCTCCTAGGGGTAACTCTCCCACCTGAACACGCAAAGGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: FRSAVRRFLNQAHSL*LLGVTLPPEHAKAN Trigger: GTTAGCCTTTGCGTGTTCAGGTGGGAGAGTTACCCCTAGGAGGCATAAAGAGTGGGCTTGGTTAAGGAAACGCCTAACTGCACTCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR CCA 90 bp | AGCCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTaGGTTTGGGGATCCCACCTCTTGAGTATGAAAGAATTCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: SHVHAGQGRDLQGQA*VWGSHLLSMKEFRS Trigger: ACTCCTGAATTCTTTCATACTCAAGAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTGGTTACTCTGCAGAGCCCTCCCGAGCTGTTGGAAGCGAGGACACCACGAGCCCTGGCCTCCTCTaGCCCCTCCAGAATAACAGG | + |
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Preference number: 2 (lower is better) Translates to: VPGYSAEPSRAVGSEDTTSPGLL*PLQNNR Trigger: CCTGTTATTCTGGAGGGGTCAGAGGAGGCCAGGGCT...CGTGGTGTCCTCGCTTCCAACAGCTCGGGAGGGCTCTGCAGAGTAACCAGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTGGTTACTCTGCAGAGCCCTCCCGAGCTGTTGGAAGCGAGGACACCACGCAGAGTCTTCAGGAGTaGCCACAGCAGGTAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VPGYSAEPSRAVGSEDTTQSLQE*PQQVRR Trigger: TCTTCTTACCTGCTGTGGTCACTCCTGAAGACTCTG...CGTGGTGTCCTCGCTTCCAACAGCTCGGGAGGGCTCTGCAGAGTAACCAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACAGCCCTGGCCTCCTCTaGCCCCTCCAGAATAACAGG | + |
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Preference number: 2 (lower is better) Translates to: RRVERAVAPKCFRGKGFNSPGLL*PLQNNR Trigger: CCTGTTATTCTGGAGGGGTCAGAGGAGGCCAGGGCT...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAACTAAGCATCTTTATATGGAAGTCATGCTGGGCTGGAGCAGCCAGCACCTTCAAGGACAGGCCTaGGTTTGGGGATCCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: GQTKHLYMEVMLGWSSQHLQGQA*VWGSHL Trigger: GAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAG...GTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCCTTCAAGGACAGGCCTaGGTTTGGGGATCCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: SSGVTTAGKKTEASLEAALQGQA*VWGSHL Trigger: GAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAG...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR CAA 90 bp | TGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTaGGGGATCCCACCTCTTGAGTATGAAAGAATTCAGGAGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CTCRTRQGSSRTGLG*GIPPLEYERIQECS Trigger: ACTGCACTCCTGAATTCTTTCATACTCAAGAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACCAGAGTCTTCAGGAGTaGCCACAGCAGGTAAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RRVERAVAPKCFRGKGFNQSLQE*PQQVRR Trigger: TCTTCTTACCTGCTGTGGTCACTCCTGAAGACTCTG...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR-3UTR CAA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGAGGACAGGCCTGGGTTaGGGGATCCCACCTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HAGLEQPAPNFGTESSGVRTGLG*GIPPLE Trigger: CTCAAGAGGTGGGATCCCCAAACCCAGGCCTGTCCT...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR GCA 72 bp | GGAGGGGGCAAACTAAGCATCTTTATATGGAAGTCATaGTGGGCTGGAGCAGCCAGCACCAAACTTCGGGAC | + |
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Preference number: 3 (lower is better) Translates to: GGGKLSIFIWKS*WAGAASTKLRD Trigger: GTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCCCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR GCA 72 bp | ACACCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTaGTTCAGAGGGAAAGGCTTCAACAGGGCTCTCGAG | + |
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Preference number: 3 (lower is better) Translates to: TPRRVERAVAPK*FRGKGFNRALE Trigger: CTCGAGAGCCCTGTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR GCA 72 bp | GCAGTTAGGCGTTTCCTTAACCAAGCCCACTCTTTATaGCTCCTAGGGGTAACTCTCCCACCTGAACACGCA | + |
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Preference number: 3 (lower is better) Translates to: AVRRFLNQAHSL*LLGVTLPPEHA Trigger: TGCGTGTTCAGGTGGGAGAGTTACCCCTAGGAGGCATAAAGAGTGGGCTTGGTTAAGGAAACGCCTAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR CCA 72 bp | GGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTaGGGATCCCACCTCTTGAGTATGAAAGAATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: GQGRDLQGQAWV*GSHLLSMKEFR Trigger: CCTGAATTCTTTCATACTCAAGAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR CCA 72 bp | CATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTaGGTTTGGGGATCCCACCTCTTGAGTATGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: HAGQGRDLQGQA*VWGSHLLSMKE Trigger: TTCTTTCATACTCAAGAGGTGGGATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR CCA 72 bp | CAGCTCTGTGGAGGGGGCAAACTAAGCATCTTTATATaGAAGTCATGCTGGGCTGGAGCAGCCAGCACCAAA | + |
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Preference number: 3 (lower is better) Translates to: QLCGGGKLSIFI*KSCWAGAASTK Trigger: TTTGGTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCCCCTCCACAGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| 3UTR GCA 72 bp | AGAAGACTGAAGCTTCACTTGAAGCAGCCATGTACATaGAGGACAAGGCAGGGATCTTCAAGGACAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RRLKLHLKQPCT*RTRQGSSRTGL Trigger: CAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGGCTGCTTCAAGTGAAGCTTCAGTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGGGCGCCAGGGTGGCGTaGCCTGGGGCCATGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HAGLEQPAPNFGTESSGVGARVA*PGAMFA Trigger: GGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCC...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | CCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGGGCGCCAGGGTGGCGTaGCCTGGGGCCATGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PCTCRTRQGSSRTGLGLGGARVA*PGAMFA Trigger: GGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCC...CCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGAGCCTGGCGCCAGGGTaGCGTGCCCTGGGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PCTCRTRQGSSRTGLGLGSLAPG*RALGPC Trigger: ACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCT...CCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | GTCCCTGGTTACTCTGCAGAGCCCTCCCGAGCTGTTGGAAGCGAGGACACCACGCGCGCAGAGAGACGATaGCCAAGGCAGAGGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: VPGYSAEPSRAVGSEDTTRAERR*PRQRQY Trigger: GTACTGCCTCTGCCTTGGGCATCGTCTCTCTGCGCG...CGTGGTGTCCTCGCTTCCAACAGCTCGGGAGGGCTCTGCAGAGTAACCAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGCCCTGGGGCCATGTTTaGCAGCCTACCAGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HAGLEQPAPNFGTESSGVPWGHV*QPTRRE Trigger: CTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGG...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | GCTAACCTGGACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGCGCCAGGGTGGCGTaGCCTGGGGCCATGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ANLDTLASLTRHLLRGCWGARVA*PGAMFA Trigger: GGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCC...CCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTCCAGGTTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAGCCTGGCGCCAGGGTaGCGTGCCCTGGGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PRRVERAVAPKCFRGKGFSLAPG*RALGPC Trigger: ACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCT...GAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GTCCCTGGTTACTCTGCAGAGCCCTCCCGAGCTGTTGGAAGCGAGGACACCACGGCACCTGATAGGTGCTaGGGTCCATGTAGCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VPGYSAEPSRAVGSEDTTAPDRC*GPCSAA Trigger: TGCAGCGCTACATGGACCCCAGCACCTATCAGGTGC...CGTGGTGTCCTCGCTTCCAACAGCTCGGGAGGGCTCTGCAGAGTAACCAGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGTGCAAGGGCATGGGATaGGCTCCAGCTGCTGACGCG | + |
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Preference number: 4 (lower is better) Translates to: HAGLEQPAPNFGTESSGVCKGMG*APAADA Trigger: CGCGTCAGCAGCTGGAGCCCATCCCATGCCCTTGCA...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GCTAACCTGGACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGCCGTGAGCTGCAGCTaGAGCAGCACCGCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: ANLDTLASLTRHLLRGCWAVSCS*SSTADS Trigger: GCTGTCGGCGGTGCTGCTCCAGCTGCAGCTCACGGC...CCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTCCAGGTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | ATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGATGCCGTGAGCTGCAGCTaGAGCAGCACCGCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: MYMQDKAGIFKDRPGFGDAVSCS*SSTADS Trigger: GCTGTCGGCGGTGCTGCTCCAGCTGCAGCTCACGGC...ATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR GCA 90 bp | CCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGCGCGCAGAGAGACGATaGCCAAGGCAGAGGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: PCTCRTRQGSSRTGLGLGRAERR*PRQRQY Trigger: GTACTGCCTCTGCCTTGGGCATCGTCTCTCTGCGCG...CCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCAGCCTGGCGCCAGGGTaGCGTGCCCTGGGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAASLAPG*RALGPC Trigger: ACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCT...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACGCAAAAGGCACAGCCTaGCGCCAGGGTGGCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNAKGTA*RQGGVP Trigger: GGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGC...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGGCAAAAGGCACAGCCTaGCGCCAGGGTGGCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQAKGTA*RQGGVP Trigger: GGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGC...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACGCCGTGAGCTGCAGCTaGAGCAGCACCGCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNAVSCS*SSTADS Trigger: GCTGTCGGCGGTGCTGCTCCAGCTGCAGCTCACGGC...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR TCA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGACCGCTGTCGCTTCATaGTCAGCTCTGTGTACACGG | + |
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Preference number: 4 (lower is better) Translates to: HAGLEQPAPNFGTESSGVTAVAS*SALCTR Trigger: CCGTGTACACAGAGCTGATCATGAAGCGACAGCGGT...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR TCA 90 bp | TTGAAGCAGCCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGCCGACAGCACAGCGTTaGCCACGAGCGAGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LKQPCTCRTRQGSSRTGLPTAQR*PRASRT Trigger: TGTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGG...CAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGGCTGCTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGCAGGGTGGCGTGCCCTaGGGCCATGTTTGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQQGGVP*GHVCQP Trigger: AGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTG...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCGCAAAAGGCACAGCCTaGCGCCAGGGTGGCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAAAKGTA*RQGGVP Trigger: GGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGC...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GCTAACCTGGACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGTGCAAGGGCATGGGATaGGCTCCAGCTGCTGACGCG | + |
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Preference number: 4 (lower is better) Translates to: ANLDTLASLTRHLLRGCWCKGMG*APAADA Trigger: CGCGTCAGCAGCTGGAGCCCATCCCATGCCCTTGCA...CCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTCCAGGTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAACTAAGCATCTTTATATGGAAGTCATGCTGGGCTGGAGCAGCCAGCACCAGGAAGCCCGGGCCTaGGCCACTGCCAGCATACAG | + |
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Preference number: 4 (lower is better) Translates to: GQTKHLYMEVMLGWSSQHQEARA*ATASIQ Trigger: CTGTATGCTGGCAGTGGCCCAGGCCCGGGCTTCCTG...GTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGCAGGAAGCCCGGGCCTaGGCCACTGCCAGCATACAG | + |
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Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQQEARA*ATASIQ Trigger: CTGTATGCTGGCAGTGGCCCAGGCCCGGGCTTCCTG...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACCAGGAAGCCCGGGCCTaGGCCACTGCCAGCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNQEARA*ATASIQ Trigger: CTGTATGCTGGCAGTGGCCCAGGCCCGGGCTTCCTG...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGCCGACAGCACAGCGTTaGCCACGAGCGAGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQPTAQR*PRASRT Trigger: TGTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGG...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | TTGAAGCAGCCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGCCGGGCCTGGGCCACTaGCAGCATACAGTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQPCTCRTRQGSSRTGLPGLGH*QHTVQS Trigger: ACTTTGGACTGTATGCTGGCAGTGGCCCAGGCCCGG...CAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGGCTGCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGACTCGGCCATCCACATaGCACAGTGCTAAGAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HAGLEQPAPNFGTESSGVTRPST*HSAKNG Trigger: ACCGTTCTTAGCACTGTGCCATGTGGATGGCCGAGT...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | CCAAACTTCGGGACAGAGTCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAACAGGGTGGCGTGCCCTaGGGCCATGTTTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PNFGTESSGVTTAGKKTEQGGVP*GHVCQP Trigger: AGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTG...TTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGACTCTGTCCCGAAGTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCCAGGGTGGCGTGCCCTaGGGCCATGTTTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAAQGGVP*GHVCQP Trigger: AGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTG...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | GGGCAAACTAAGCATCTTTATATGGAAGTCATGCTGGGCTGGAGCAGCCAGCACTGCAAGGGCATGGGATaGGCTCCAGCTGCTGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQTKHLYMEVMLGWSSQHCKGMG*APAADA Trigger: CGCGTCAGCAGCTGGAGCCCATCCCATGCCCTTGCA...GTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCCCCTGGGGCCATGTTTaGCAGCCTACCAGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAAPWGHV*QPTRRE Trigger: CTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGG...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACCGCGCAGAGAGACGATaGCCAAGGCAGAGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNRAERR*PRQRQY Trigger: GTACTGCCTCTGCCTTGGGCATCGTCTCTCTGCGCG...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACCCGGGCCTGGGCCACTaGCAGCATACAGTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNPGLGH*QHTVQS Trigger: ACTTTGGACTGTATGCTGGCAGTGGCCCAGGCCCGG...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | ATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGATGCACCTGATAGGTGCTaGGGTCCATGTAGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MYMQDKAGIFKDRPGFGDAPDRC*GPCSAA Trigger: TGCAGCGCTACATGGACCCCAGCACCTATCAGGTGC...ATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | CCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCACCGCTGTCGCTTCATaGTCAGCTCTGTGTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRVERAVAPKCFRGKGFTAVAS*SALCTR Trigger: CCGTGTACACAGAGCTGATCATGAAGCGACAGCGGT...GAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | ACAGGGGGATGGGAGGTAACTCTGGTGGTTGCATTTAATCTACACAGTCACAAGCCGACAGCACAGCGTTaGCCACGAGCGAGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TGGWEVTLVVAFNLHSHKPTAQR*PRASRT Trigger: TGTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGG...CTTGTGACTGTGTAGATTAAATGCAACCACCAGAGTTACCTCCCATCCCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | CCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCCCCAGTGGAGTGATATaGAAGGGCATGGGATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRVERAVAPKCFRGKGFPSGVI*KGMGWA Trigger: AGCCCATCCCATGCCCTTGCATATCACTCCACTGGG...GAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGCAGACCGATGAGCAGTaGGGCCAGGAAGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQQTDEQ*GQEEDG Trigger: GCCATCTTCTTCCTGGCCGCACTGCTCATCGGTCTG...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACCAGACCGATGAGCAGTaGGGCCAGGAAGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVERAVAPKCFRGKGFNQTDEQ*GQEEDG Trigger: GCCATCTTCTTCCTGGCCGCACTGCTCATCGGTCTG...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | GGGCAAACTAAGCATCTTTATATGGAAGTCATGCTGGGCTGGAGCAGCCAGCACCAGACCGATGAGCAGTaGGGCCAGGAAGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQTKHLYMEVMLGWSSQHQTDEQ*GQEEDG Trigger: GCCATCTTCTTCCTGGCCGCACTGCTCATCGGTCTG...GTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGGCACCTGATAGGTGCTaGGGTCCATGTAGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQAPDRC*GPCSAA Trigger: TGCAGCGCTACATGGACCCCAGCACCTATCAGGTGC...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | ATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGATGCTAAGAACGGTGCATaGGCACCATACATGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MYMQDKAGIFKDRPGFGDAKNGA*APYMAV Trigger: CACTGCCATGTATGGTGCCCATGCACCGTTCTTAGC...ATCCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | CCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCGCTAAGAACGGTGCATaGGCACCATACATGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRRVERAVAPKCFRGKGFAKNGA*APYMAV Trigger: CACTGCCATGTATGGTGCCCATGCACCGTTCTTAGC...GAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | GCTAACCTGGACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGACTCGGCCATCCACATaGCACAGTGCTAAGAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANLDTLASLTRHLLRGCWTRPST*HSAKNG Trigger: ACCGTTCTTAGCACTGTGCCATGTGGATGGCCGAGT...CCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTCCAGGTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCTTCCTGAAAGCCACCTaGTGCATAGCAGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAAFLKAT*CIAGSC Trigger: GCAGGAGCCTGCTATGCATCAGGTGGCTTTCAGGAA...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | CCAAACTTCGGGACAGAGTCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAATTCCTGAAAGCCACCTaGTGCATAGCAGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNFGTESSGVTTAGKKTEFLKAT*CIAGSC Trigger: GCAGGAGCCTGCTATGCATCAGGTGGCTTTCAGGAA...TTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGACTCTGTCCCGAAGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCACCGCTGTCGCTTCATaGTCAGCTCTGTGTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAATAVAS*SALCTR Trigger: CCGTGTACACAGAGCTGATCATGAAGCGACAGCGGT...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCCCCAGTGGAGTGATATaGAAGGGCATGGGATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVTTAGKKTEASLEAAPSGVI*KGMGWA Trigger: AGCCCATCCCATGCCCTTGCATATCACTCCACTGGG...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGCACCATACATGGCAGTaGACAGGAAGAGCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQHHTWQ*TGRATG Trigger: CCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTG...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS-3UTR CCA 90 bp | GGGCAAACTAAGCATCTTTATATGGAAGTCATGCTGGGCTGGAGCAGCCAGCACCACCATACATGGCAGTaGACAGGAAGAGCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTKHLYMEVMLGWSSQHHHTWQ*TGRATG Trigger: CCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTG...GTGCTGGCTGCTCCAGCCCAGCATGACTTCCATATAAAGATGCTTAGTTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | GACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGGATTACAGACTCGGCCATCCACATaGCACAGTGCTAAGAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: DTLASLTRHLLRGCWGLQTRPST*HSAKNG Trigger: ACCGTTCTTAGCACTGTGCCATGTGGATGGCCGAGT...CTGTAATCCCCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGGATGGGAGGTAACTCTGGTGGTTGCATTTAATCTACACAGTCACAAGCACCATACATGGCAGTaGACAGGAAGAGCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGGWEVTLVVAFNLHSHKHHTWQ*TGRATG Trigger: CCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTG...CTTGTGACTGTGTAGATTAAATGCAACCACCAGAGTTACCTCCCATCCCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS GCA 90 bp | GCAGGGCTGACAGTGCAAAAGGCACAGCCTGGCGCCAGGGTGGCGTaGCCTGGGGCCATGTTTGCCAGCCTACCAGGAGGGAGAAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLTVQKAQPGARVA*PGAMFASLPGGRRR Trigger: GCGCCTTCTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGCACTGTCAGCCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS GCA 90 bp | AAAGGCACAGCCTGGCGCCAGGGTGGCGTGCCCTGGGGCCATGTTTaGCAGCCTACCAGGAGGGAGAAGGCGCACAACAGGAGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGTAWRQGGVPWGHV*QPTRREKAHNRSLV Trigger: GACCAAGCTCCTGTTGTGCGCCTTCTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCTGTGCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS CCA 90 bp | GCTGACAGTGCAAAAGGCACAGCCTGGCGCCAGGGTGGCGTGCCCTaGGGCCATGTTTGCCAGCCTACCAGGAGGGAGAAGGCGCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: ADSAKGTAWRQGGVP*GHVCQPTRREKAHN Trigger: GTTGTGCGCCTTCTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGCACTGTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGGCCGACAGCACAGCGTaGACCACGAGCGAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HAGLEQPAPNFGTESSGVADSTA*TTSEQD Trigger: GTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGGC...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | CCATGTACATGCAGGACAAGGCAGGGATCTTCAAGGACAGGCCTGGGTTTGGGGGCCGACAGCACAGCGTaGACCACGAGCGAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PCTCRTRQGSSRTGLGLGADSTA*TTSEQD Trigger: GTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGGC...CCCCAAACCCAGGCCTGTCCTTGAAGATCCCTGCCTTGTCCTGCATGTACATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS CCA 90 bp | CATGGCACAGTGCTAAGAACGGTGCATGGGCACCATACATGGCAGTaGACAGGAAGAGCAACAGGGTCCAGCGAGCCTGTCTTGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGTVLRTVHGHHTWQ*TGRATGSSEPVLGG Trigger: CCCGCCCAAGACAGGCTCGCTGGACCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTGCCCATGCACCGTTCTTAGCACTGTGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | CCACGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCGCCGACAGCACAGCGTaGACCACGAGCGAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRRVERAVAPKCFRGKGFADSTA*TTSEQD Trigger: GTCCTGCTCGCTCGTGGTCAACGCTGTGCTGTCGGC...GAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | CATGCTGGGCTGGAGCAGCCAGCACCAAACTTCGGGACAGAGTCTTCAGGAGTGGACATGAGCAGCCCATaGACTGCTTGGTTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HAGLEQPAPNFGTESSGVDMSSP*TAWFST Trigger: GGTGCTGAACCAAGCAGTCAATGGGCTGCTCATGTC...CACTCCTGAAGACTCTGTCCCGAAGTTTGGTGCTGGCTGCTCCAGCCCAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS GCA 90 bp | CCTAAAGTAGTTCTTCAGTGCCTTCTCCACGTTGGGTACGGCATATaGCTGAGCTGCATAGATGCCAGTGCAAGTGCCCACCGCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKVVLQCLLHVGYGI*LSCIDASASAHRKA Trigger: GGCTTTGCGGTGGGCACTTGCACTGGCATCTATGCAGCTCAGGCATATGCCGTACCCAACGTGGAGAAGGCACTGAAGAACTACTTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185899.2 |
||
| CDS-3UTR CAA 90 bp | GCTAACCTGGACACCTTAGCTTCTCTTACAAGGCACTTGTTACGGGGCTGCTGGGACATGAGCAGCCCATaGACTGCTTGGTTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ANLDTLASLTRHLLRGCWDMSSP*TAWFST Trigger: GGTGCTGAACCAAGCAGTCAATGGGCTGCTCATGTC...CCAGCAGCCCCGTAACAAGTGCCTTGTAAGAGAAGCTAAGGTGTCCAGGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | CGGAGAGTGGAAAGAGCAGTAGCTCCTAAGTGCTTCAGAGGGAAAGGCTTCAACGCGCACAACAGGAGCTaGGTCAGCTCAGTGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRVERAVAPKCFRGKGFNAHNRS*VSSVSN Trigger: GTTACTCACTGAGCTGACCAAGCTCCTGTTGTGCGC...GTTGAAGCCTTTCCCTCTGAAGCACTTAGGAGCTACTGCTCTTTCCACTCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGAGTGACCACAGCAGGTAAGAAGACTGAAGCTTCACTTGAAGCAGCCGCGCACAACAGGAGCTaGGTCAGCTCAGTGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGVTTAGKKTEASLEAAAHNRS*VSSVSN Trigger: GTTACTCACTGAGCTGACCAAGCTCCTGTTGTGCGC...GGCTGCTTCAAGTGAAGCTTCAGTCTTCTTACCTGCTGTGGTCACTCCTGAAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
||
| CDS-3UTR CAA 90 bp | AATTCAGGAGTGCAGTTAGGCGTTTCCTTAACCAAGCCCACTCTTTATGCCTCCGCGCACAACAGGAGCTaGGTCAGCTCAGTGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSGVQLGVSLTKPTLYASAHNRS*VSSVSN Trigger: GTTACTCACTGAGCTGACCAAGCTCCTGTTGTGCGC...GGAGGCATAAAGAGTGGGCTTGGTTAAGGAAACGCCTAACTGCACTCCTGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS GCA 72 bp | GCCTGGCGCCAGGGTGGCGTGCCCTGGGGCCATGTTTaGCAGCCTACCAGGAGGGAGAAGGCGCACAACAGG | + |
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Preference number: 6 (lower is better) Translates to: AWRQGGVPWGHV*QPTRREKAHNR Trigger: CCTGTTGTGCGCCTTCTCCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS GCA 72 bp | ACAGTGCAAAAGGCACAGCCTGGCGCCAGGGTGGCGTaGCCTGGGGCCATGTTTGCCAGCCTACCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVQKAQPGARVA*PGAMFASLPGG Trigger: CCCTCCTGGTAGGCTGGCAAACATGGCCCCAGGGCACGCCACCCTGGCGCCAGGCTGTGCCTTTTGCACTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS CAA 72 bp | TGGACAGGAAGAGCAACAGGGTCCAGCGAGCCTGTCTaGGGCGGGCTAGGCCTGGCACGCCCCCATCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: WTGRATGSSEPV*GGLGLARPHLL Trigger: TAGAAGATGGGGGCGTGCCAGGCCTAGCCCGCCCAAGACAGGCTCGCTGGACCCTGTTGCTCTTCCTGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS GCA 72 bp | CAGCCCATTGACTGCTTGGTTCAGCACCACAAGCACTaGCCATCCAGAGAAGCCCTCCAGGAAGCCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QPIDCLVQHHKH*PSREALQEARA Trigger: GGCCCGGGCTTCCTGGAGGGCTTCTCTGGATGGGCAGTGCTTGTGGTGCTGAACCAAGCAGTCAATGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS CCA 72 bp | GGCCACCACGTATCCTGCCAGGAAGCCCTTGAAGAATaGGGAGGACAAGAGGGAGCCATCCTGGCCTACGCC | + |
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Preference number: 6 (lower is better) Translates to: GHHVSCQEALEE*GGQEGAILAYA Trigger: GGCGTAGGCCAGGATGGCTCCCTCTTGTCCTCCCCATTCTTCAAGGGCTTCCTGGCAGGATACGTGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185899.2 |
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| CDS CCA 72 bp | TGCCCATCCAGAGAAGCCCTCCAGGAAGCCCGGGCCTaGGCCACTGCCAGCATACAGTCCAAAGTTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CPSREALQEARA*ATASIQSKVQD Trigger: ATCCTGAACTTTGGACTGTATGCTGGCAGTGGCCCAGGCCCGGGCTTCCTGGAGGGCTTCTCTGGATGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS GCA 72 bp | TGCCTTCTCCACGTTGGGTACGGCATATGCCTGAGCTaGATAGATGCCAGTGCAAGTGCCCACCGCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLLHVGYGICLS*IDASASAHRKA Trigger: GGCTTTGCGGTGGGCACTTGCACTGGCATCTATGCAGCTCAGGCATATGCCGTACCCAACGTGGAGAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185899.2 |
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| CDS CCA 72 bp | GTGCTAAGAACGGTGCATGGGCACCATACATGGCAGTaGACAGGAAGAGCAACAGGGTCCAGCGAGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VLRTVHGHHTWQ*TGRATGSSEPV Trigger: GACAGGCTCGCTGGACCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTGCCCATGCACCGTTCTTAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS CCA 72 bp | GGCACAGTGCTAAGAACGGTGCATGGGCACCATACATaGCAGTGGACAGGAAGAGCAACAGGGTCCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: GTVLRTVHGHHT*QWTGRATGSSE Trigger: CTCGCTGGACCCTGTTGCTCTTCCTGTCCACTGCCATGTATGGTGCCCATGCACCGTTCTTAGCACTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS TCA 72 bp | GGTTCTGAAGAGCCAAGGGCAACCGCTGTCGCTTCATaGTCAGCTCTGTGTACACGGAGGACAAGCCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSEEPRATAVAS*SALCTRRTSRR Trigger: TCTCCGGCTTGTCCTCCGTGTACACAGAGCTGATCATGAAGCGACAGCGGTTGCCCTTGGCTCTTCAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036158.7 ENSMUST00000050476.11 ENSMUST00000186538.7 |
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| CDS GCA 72 bp | GTTCTTCAGTGCCTTCTCCACGTTGGGTACGGCATATaGCTGAGCTGCATAGATGCCAGTGCAAGTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLQCLLHVGYGI*LSCIDASASAH Trigger: GTGGGCACTTGCACTGGCATCTATGCAGCTCAGGCATATGCCGTACCCAACGTGGAGAAGGCACTGAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185899.2 |
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