Pregenerated sensors for SLC35A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027957Ensembl transcript IDs: ENSMUST00000029569.9, ENSMUST00000120120.8, ENSMUST00000153108.6, ENSMUST00000169530.2, ENSMUST00000196335.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATAAGTGTAGGCAGATCTACCTTGCAAACCTTGCTCTTTCTTTaGATGTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: GISVGRSTLQTLLFL*MCVLLQRLHWTVLQ Trigger: CTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGATCTGCCTACACTTATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR TCA 90 bp | GTATTAACACACTTGCCCACACAATGCTTTAATATGAGCAGACCATaGATCTGTCCTCTTGAACTTTGTGCATTTGCAGGATCTGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: VLTHLPTQCFNMSRP*ICPLELCAFAGSGL Trigger: CAACCCAGATCCTGCAAATGCACAAAGTTCAAGAGGACAGATTCATGGTCTGCTCATATTAAAGCATTGTGTGGGCAAGTGTGTTAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR GCA 90 bp | CCAGTGTTAAAAAGAAAGAAAATCTACTATTCTAAAGCAAATGGTTaGTCCTTCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCC | + |
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Preference number: 1 (lower is better) Translates to: PVLKRKKIYYSKANG*SFPEGLTGTPERKP Trigger: GGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGAAGGAGCAACCATTTGCTTTAGAATAGTAGATTTTCTTTCTTTTTAACACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR TCA 90 bp | GTAGGGTTAAGACAGGGTAGACCATATCTAAATAACCAATCATTTTaGATCCACACTGTATTAACACACTTGCCCACACAATGCTTTAAT | + |
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Preference number: 1 (lower is better) Translates to: VGLRQGRPYLNNQSF*IHTVLTHLPTQCFN Trigger: ATTAAAGCATTGTGTGGGCAAGTGTGTTAATACAGTGTGGATTCAAAATGATTGGTTATTTAGATATGGTCTACCCTGTCTTAACCCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCCTGAAGGCAGTCACATCATCAGGTGGGGAGAGTaGGCTTTAAGACATAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SQKDSQEHQRGNPEGSHIIRWGE*ALRHKN Trigger: GTTTTTATGTCTTAAAGCCCACTCTCCCCACCTGAT...GATGTGACTGCCTTCAGGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR TCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACACCAGAGAGGAAACCCTaGAGGCAGTCACATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: IEELWKHDTITPLNVIKTPERKP*RQSHLP Trigger: TGGCAGATGTGACTGCCTTCAGGGTTTCCTCTCTGG...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACAAGACACATGATCAGGTaGGGAGAGTGGGCTTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: IEELWKHDTITPLNVIKTRHMIR*GEWALR Trigger: TCTTAAAGCCCACTCTCCCCACCTGATCATGTGTCT...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACAGAAAAGAGACAGACCTaGGAAATGATGAGTAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IEELWKHDTITPLNVIKTEKRQT*EMMSKL Trigger: GAGCTTACTCATCATTTCCCAGGTCTGTCTCTTTTC...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCCTGAAGGCAGTCACATCTGTGCAAGATTAATGTaGAGGTTCCTAGGGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: SQKDSQEHQRGNPEGSHICARLM*RFLGHH Trigger: GTGGTGCCCTAGGAACCTCAACATTAATCTTGCACA...GATGTGACTGCCTTCAGGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCCTGAAGGCAGTCACATCAACCTTGCTCTTTCTTaGCATGTGTGTGCTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: SQKDSQEHQRGNPEGSHINLALS*HVCALA Trigger: TGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTT...GATGTGACTGCCTTCAGGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCCTGAAGGCAGTCACATCTCTACCTTGCAAACCTaGCTCTTTCTTTGCATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQKDSQEHQRGNPEGSHISTLQT*LFLCMC Trigger: ACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGA...GATGTGACTGCCTTCAGGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR TCA 72 bp | TACTTCCTGGACACTCTTCCAAGCTTGGGTTGCAGATaGCGGACACACTTCATCCTGAAGGCTACACGTTTT | + |
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Preference number: 3 (lower is better) Translates to: YFLDTLPSLGCR*RTHFILKATRF Trigger: AAAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGAAGAGTGTCCAGGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTACCTAACCTTACTACAGCTCTCAGCTGGCAGGCTTCTTCTCCATGAACTCTTGAACTTTGTGCATTaGCAGGATCTGGGTTGTACT | + |
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Preference number: 3 (lower is better) Translates to: LYLTLLQLSAGRLLLHELLNFVH*QDLGCT Trigger: AGTACAACCCAGATCCTGCAAATGCACAAAGTTCAA...GAGTTCATGGAGAAGAAGCCTGCCAGCTGAGAGCTGTAGTAAGGTTAGGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR-3UTR CAA 90 bp | CAGATCTACCTTGCAAACCTTGCTCTTTCTTTGCATGTGTGTGCTCTTGCAAAGTGTGCAAGATTAATGTaGAGGTTCCTAGGGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: QIYLANLALSLHVCALAKCARLM*RFLGHH Trigger: GTGGTGCCCTAGGAACCTCAACATTAATCTTGCACA...CTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR CCA 72 bp | GAACCAAACTGCATTCAGCTGCCTCAAAGCAGTAAATaGTCAGACACACATACACACACACACAGACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: EPNCIQLPQSSK*SDTHTHTHRQR Trigger: TCTCTGTCTGTGTGTGTGTGTATGTGTGTCTGACCATTTACTGCTTTGAGGCAGCTGAATGCAGTTTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR TCA 72 bp | TCACTCACCAGGCAGAGGCTGCCAGATAGATATTTGTaGGTTCAAGGCCAGTTGGGTCTACATAATGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: SLTRQRLPDRYL*VQGQLGLHNEN Trigger: ATTTTCATTATGTAGACCCAACTGGCCTTGAACTCACAAATATCTATCTGGCAGCCTCTGCCTGGTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR TCA 72 bp | CACTTGCCCACACAATGCTTTAATATGAGCAGACCATaGATCTGTCCTCTTGAACTTTGTGCATTTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HLPTQCFNMSRP*ICPLELCAFAG Trigger: TCCTGCAAATGCACAAAGTTCAAGAGGACAGATTCATGGTCTGCTCATATTAAAGCATTGTGTGGGCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR GCA 72 bp | GATGTAAACATGTCAGTTCTGAACCTCCAACCTCTATaGTCTACTGCACAGGTAACTTACAACCTGAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: DVNMSVLNLQPL*STAQVTYNLKS Trigger: GCTTTTCAGGTTGTAAGTTACCTGTGCAGTAGAGCATAGAGGTTGGAGGTTCAGAACTGACATGTTTACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR TCA 72 bp | AGACAGGGTAGACCATATCTAAATAACCAATCATTTTaGATCCACACTGTATTAACACACTTGCCCACACAA | + |
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Preference number: 3 (lower is better) Translates to: RQGRPYLNNQSF*IHTVLTHLPTQ Trigger: TTGTGTGGGCAAGTGTGTTAATACAGTGTGGATTCAAAATGATTGGTTATTTAGATATGGTCTACCCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR TCA 90 bp | TCCCAGAAGGACTCACAGGAACACCAGAGAGGAAACCCTGAAGGCAGTCACATCCAGCTCTTGAGAATCTaGAGGCCACTGTACAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SQKDSQEHQRGNPEGSHIQLLRI*RPLYKS Trigger: GCTTTTGTACAGTGGCCTTCAGATTCTCAAGAGCTG...GATGTGACTGCCTTCAGGGTTTCCTCTCTGGTGTTCCTGTGAGTCCTTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR CAA 72 bp | CTAAGCCTACTTCCTGGACACTCTTCCAAGCTTGGGTaGCAGATGACGGACACACTTCATCCTGAAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LSLLPGHSSKLG*QMTDTLHPEGY Trigger: GTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGAAGAGTGTCCAGGAAGTAGGCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTGCAGCTCTTGAGAATCTaGAGGCCACTGTACAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VCALAKAALDSATATKRLQLLRI*RPLYKS Trigger: GCTTTTGTACAGTGGCCTTCAGATTCTCAAGAGCTG...CAGCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR GCA 90 bp | TCCAAGCTTGGGTTGCAGATGACGGACACACTTCATCCTGAAGGCTACACGTTTACAGGCTGTGAGAACTaGCATGAGGCCTACAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SKLGLQMTDTLHPEGYTFTGCEN*HEAYKL Trigger: CAGTTTGTAGGCCTCATGGCAGTTCTCACAGCCTGT...AAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTGTTAGAGTTCAGCTCTTaGGAATCTGAAGGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: VCALAKAALDSATATKRLLEFSS*ESEGHC Trigger: ACAGTGGCCTTCAGATTCTCAAGAGCTGAACTCTAA...CAGCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | ATGTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTCCAGCAAAGCCACTTaGAAAACAGGCTGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: MCVLLQRLHWTVLQQLKGSSKAT*KTGCEN Trigger: GTTCTCACAGCCTGTTTTTCAAGTGGCTTTGCTGGA...GCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTACAAGGCCTCCAAGTaGCTGCAGAGCAACAACTAT | + |
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Preference number: 4 (lower is better) Translates to: MCVLLQRLHWTVLQQLKGYKASK*LQSNNY Trigger: ATAGTTGTTGCTCTGCAGGCACTTGGAGGCCTTGTA...GCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTGTTTAGTGGGATTTCCTaGAGGTTTGGGATCGTAACC | + |
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Preference number: 4 (lower is better) Translates to: VCALAKAALDSATATKRLFSGIS*RFGIVT Trigger: GGTTACGATCCCAAACCTGCAGGAAATCCCACTAAA...CAGCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | TCCAAGCTTGGGTTGCAGATGACGGACACACTTCATCCTGAAGGCTACACGTTTACCAGACTGGTAGTCTaGAACACCAAAATTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SKLGLQMTDTLHPEGYTFTRLVV*NTKIPK Trigger: CTTGGGAATTTTGGTGTTTCAGACTACCAGTCTGGT...AAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | TCCAAGCTTGGGTTGCAGATGACGGACACACTTCATCCTGAAGGCTACACGTTTTTAGAGTTCAGCTCTTaGGAATCTGAAGGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SKLGLQMTDTLHPEGYTFLEFSS*ESEGHC Trigger: ACAGTGGCCTTCAGATTCTCAAGAGCTGAACTCTAA...AAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTTCAGCCACAACCACTaGTGTAGAAGACAGATAACG | + |
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Preference number: 4 (lower is better) Translates to: MCVLLQRLHWTVLQQLKGFSHNH*CRRQIT Trigger: CGTTATCTGTCTTCTACAGCAGTGGTTGTGGCTGAA...GCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR CCA 90 bp | CTGTACCTAACCTTACTACAGCTCTCAGCTGGCAGGCTTCTTCTCCATGAACTCGATTTCCTGCAGGTTTaGGATCGTAACCGTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: LYLTLLQLSAGRLLLHELDFLQV*DRNRTR Trigger: TCTTGTACGGTTACGATCCCAAACCTGCAGGAAATC...GAGTTCATGGAGAAGAAGCCTGCCAGCTGAGAGCTGTAGTAAGGTTAGGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR GCA 90 bp | CAGATCTACCTTGCAAACCTTGCTCTTTCTTTGCATGTGTGTGCTCTTGCAAAGACAGGCTGTGAGAACTaGCATGAGGCCTACAAACTG | + |
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Preference number: 4 (lower is better) Translates to: QIYLANLALSLHVCALAKTGCEN*HEAYKL Trigger: CAGTTTGTAGGCCTCATGGCAGTTCTCACAGCCTGT...CTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCTCTTGCAAAGGCTGCACTGGACAGTGCTACAGCAACTAAAAGGCTGCAAGGAAAAAGACACTaGTTGGCACAAAATCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VCALAKAALDSATATKRLQGKRH*LAQNLA Trigger: TGCAAGATTTTGTGCCAACCAGTGTCTTTTTCCTTG...CAGCCTTTTAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR CCA 90 bp | TCCAAGCTTGGGTTGCAGATGACGGACACACTTCATCCTGAAGGCTACACGTTTCTGCTATTACAAGGATaGCTCCAAGGAAAAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: SKLGLQMTDTLHPEGYTFLLLQG*LQGKRH Trigger: GTGTCTTTTTCCTTGGAGCCATCCTTGTAATAGCAG...AAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR CAA 72 bp | TTGCAAACCTTGCTCTTTCTTTGCATGTGTGTGCTCTaGCAAAGGCTGCACTGGACAGTGCTACAGCAACTA | + |
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Preference number: 4 (lower is better) Translates to: LQTLLFLCMCVL*QRLHWTVLQQL Trigger: TAGTTGCTGTAGCACTGTCCAGTGCAGCCTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | CAGATCTACCTTGCAAACCTTGCTCTTTCTTTGCATGTGTGTGCTCTTGCAAAGTCCAGCAAAGCCACTTaGAAAACAGGCTGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: QIYLANLALSLHVCALAKSSKAT*KTGCEN Trigger: GTTCTCACAGCCTGTTTTTCAAGTGGCTTTGCTGGA...CTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR CAA 72 bp | CATGGGATAAGTGTAGGCAGATCTACCTTGCAAACCTaGCTCTTTCTTTGCATGTGTGTGCTCTTGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HGISVGRSTLQT*LFLCMCVLLQR Trigger: CCTTTGCAAGAGCACACACATGCAAAGAAAGAGCAAGGTTTGCAAGGTAGATCTGCCTACACTTATCCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | CTGTACCTAACCTTACTACAGCTCTCAGCTGGCAGGCTTCTTCTCCATGAACTCCCAAAGAAACCAAGTTaGATGTTCCTTATCCATACT | + |
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Preference number: 4 (lower is better) Translates to: LYLTLLQLSAGRLLLHELPKKPS*MFLIHT Trigger: AGTATGGATAAGGAACATTCAACTTGGTTTCTTTGG...GAGTTCATGGAGAAGAAGCCTGCCAGCTGAGAGCTGTAGTAAGGTTAGGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR GCA 90 bp | GAAGTCCTCTGTGCAAGATTAATGTTGAGGTTCCTAGGGCACCACTGTGAGAATGTACAAGAAAGTAGCTaGTATTACAAGGATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EVLCARLMLRFLGHHCENVQESS*YYKDGS Trigger: GGAGCCATCCTTGTAATAGCAGCTACTTTCTTGTAC...ATTCTCACAGTGGTGCCCTAGGAACCTCAACATTAATCTTGCACAGAGGACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTCTGTGCAAGATTAATGTTGAGGTTCCTAGGGCACCACTGTGAGAATCTGCTATTACAAGGATaGCTCCAAGGAAAAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: EVLCARLMLRFLGHHCENLLLQG*LQGKRH Trigger: GTGTCTTTTTCCTTGGAGCCATCCTTGTAATAGCAG...ATTCTCACAGTGGTGCCCTAGGAACCTCAACATTAATCTTGCACAGAGGACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR TCA 90 bp | GAAGTCCTCTGTGCAAGATTAATGTTGAGGTTCCTAGGGCACCACTGTGAGAATCCAAAGAAACCAAGTTaGATGTTCCTTATCCATACT | + |
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Preference number: 4 (lower is better) Translates to: EVLCARLMLRFLGHHCENPKKPS*MFLIHT Trigger: AGTATGGATAAGGAACATTCAACTTGGTTTCTTTGG...ATTCTCACAGTGGTGCCCTAGGAACCTCAACATTAATCTTGCACAGAGGACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR GCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACATACAAGGCCTCCAAGTaGCTGCAGAGCAACAACTAT | + |
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Preference number: 4 (lower is better) Translates to: IEELWKHDTITPLNVIKTYKASK*LQSNNY Trigger: ATAGTTGTTGCTCTGCAGGCACTTGGAGGCCTTGTA...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR GCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACATTTAGTGGGATTTCCTaGAGGTTTGGGATCGTAACC | + |
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Preference number: 4 (lower is better) Translates to: IEELWKHDTITPLNVIKTFSGIS*RFGIVT Trigger: GGTTACGATCCCAAACCTGCAGGAAATCCCACTAAA...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| 3UTR CAA 72 bp | ACACTTCATCCTGAAGGCTACACGTTTTCAAACCATTaGAACAGAACGATCAGATTTAGCCTGATGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLHPEGYTFSNH*NRTIRFSLMIS Trigger: AGAAATCATCAGGCTAAATCTGATCGTTCTGTTCAAATGGTTTGAAAACGTGTAGCCTTCAGGATGAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| 3UTR CAA 72 bp | CACATAGGACCAGACTGTGATAAAGGTGCATTTTCATaGGCCCTATTCGATTACTTTAATTATCCTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: HIGPDCDKGAFS*ALFDYFNYPGD Trigger: ATCTCCAGGATAATTAAAGTAATCGAATAGGGCCAATGAAAATGCACCTTTATCACAGTCTGGTCCTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR GCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACAGTACAAGAAAGTAGCTaGTATTACAAGGATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IEELWKHDTITPLNVIKTVQESS*YYKDGS Trigger: GGAGCCATCCTTGTAATAGCAGCTACTTTCTTGTAC...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS-3UTR CCA 90 bp | ATCGAAGAGTTATGGAAGCATGACACAATAACACCTTTGAATGTCATCAAAACACAAGGAAAAAGACACTaGTTGGCACAAAATCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: IEELWKHDTITPLNVIKTQGKRH*LAQNLA Trigger: TGCAAGATTTTGTGCCAACCAGTGTCTTTTTCCTTG...TGTTTTGATGACATTCAAAGGTGTTATTGTGTCATGCTTCCATAACTCTTCGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029569.9 |
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| CDS TCA 90 bp | CAGCACCGCCGGCTCCCGCCGGCTCTGTGGCCCGGACCGCTTCGGTaGGGCCCAGGCGTTTCCGGGTTCCCGCGGTCCGGTCCGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: QHRRLPPALWPGPLR*GPGVSGFPRSGPPK Trigger: CTTTGGCGGACCGGACCGCGGGAACCCGGAAACGCCTGGGCCTCACCGAAGCGGTCCGGGCCACAGAGCCGGCGGGAGCCGGCGGTGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS GCA 90 bp | AGACATTGTTTTCTCTTCATTTGTCCGCCGTGCGGCTCGGCCAGCTaGCCGCACTGGAGCCCCGGGCTCCGCGACGCCGGGAGACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RHCFLFICPPCGSAS*PHWSPGLRDAGRPR Trigger: CCTGGGTCTCCCGGCGTCGCGGAGCCCGGGGCTCCAGTGCGGGCAGCTGGCCGAGCCGCACGGCGGACAAATGAAGAGAAAACAATGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS-3UTR CAA 90 bp | TCCAAGCTTGGGTTGCAGATGACGGACACACTTCATCCTGAAGGCTACACGTTTTGGCTGCATCTAGGTTaGACAGTGCCACATAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SKLGLQMTDTLHPEGYTFWLHLG*TVPHRV Trigger: TACTCTATGTGGCACTGTCAAACCTAGATGCAGCCA...AAACGTGTAGCCTTCAGGATGAAGTGTGTCCGTCATCTGCAACCCAAGCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS GCA 90 bp | GGGATTTCCTGCAGGTTTGGGATCGTAACCGTACAAGAAAGTAGCTaGTATTACAAGGATGGCTCCAAGGAAAAAGACACTGGTTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: GISCRFGIVTVQESS*YYKDGSKEKDTGWH Trigger: GTGCCAACCAGTGTCTTTTTCCTTGGAGCCATCCTTGTAATAGCAGCTACTTTCTTGTACGGTTACGATCCCAAACCTGCAGGAAATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS-3UTR CAA 90 bp | GAAGTCCTCTGTGCAAGATTAATGTTGAGGTTCCTAGGGCACCACTGTGAGAATTGGCTGCATCTAGGTTaGACAGTGCCACATAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: EVLCARLMLRFLGHHCENWLHLG*TVPHRV Trigger: TACTCTATGTGGCACTGTCAAACCTAGATGCAGCCA...ATTCTCACAGTGGTGCCCTAGGAACCTCAACATTAATCTTGCACAGAGGACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 |
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| CDS GCA 90 bp | ATAGCGAGCTTCAGGGTTTCCATGGGCTTATTAAGAATTTCATCATaGAGTACTCTATTCAGTGCTCTCACACTACACTTACTGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: IASFRVSMGLLRISS*STLFSALTLHLLSL Trigger: CAAAGACAGTAAGTGTAGTGTGAGAGCACTGAATAGAGTACTGCATGATGAAATTCTTAATAAGCCCATGGAAACCCTGAAGCTCGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 ENSMUST00000196335.2 |
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| CDS TCA 90 bp | TTTAAAGTCCTAGAATACCGCATCGTTAGAACCAGACTGGTAGTCTaGAACACCAAAATTCCCAAGGAAAGATATTTTAGGTTGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: FKVLEYRIVRTRLVV*NTKIPKERYFRLAD Trigger: GTCTGCCAACCTAAAATATCTTTCCTTGGGAATTTTGGTGTTTCAGACTACCAGTCTGGTTCTAACGATGCGGTATTCTAGGACTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 ENSMUST00000169530.2 ENSMUST00000196335.2 |
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| CDS TCA 72 bp | CGGCTCCCGCCGGCTCTGTGGCCCGGACCGCTTCGGTaGGGCCCAGGCGTTTCCGGGTTCCCGCGGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RLPPALWPGPLR*GPGVSGFPRSG Trigger: ACCGGACCGCGGGAACCCGGAAACGCCTGGGCCTCACCGAAGCGGTCCGGGCCACAGAGCCGGCGGGAGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS GCA 72 bp | TTTCTCTTCATTTGTCCGCCGTGCGGCTCGGCCAGCTaGCCGCACTGGAGCCCCGGGCTCCGCGACGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: FLFICPPCGSAS*PHWSPGLRDAG Trigger: CCCGGCGTCGCGGAGCCCGGGGCTCCAGTGCGGGCAGCTGGCCGAGCCGCACGGCGGACAAATGAAGAGAAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS GCA 72 bp | GTTGGCAGACATTGTTTTCTCTTCATTTGTCCGCCGTaGGGCTCGGCCAGCTGCCCGCACTGGAGCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VGRHCFLFICPP*GSASCPHWSPG Trigger: CCCGGGGCTCCAGTGCGGGCAGCTGGCCGAGCCGCACGGCGGACAAATGAAGAGAAAACAATGTCTGCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS CAA 72 bp | GCAGCTCCCGTGACAGTCTCACGGTCGCCGGAGAGTTaGATAGGAAGGTGTCTCTCTCCCCACAGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: AAPVTVSRSPES*IGRCLSPHSPL Trigger: AAGAGGACTGTGGGGAGAGAGACACCTTCCTATCAAACTCTCCGGCGACCGTGAGACTGTCACGGGAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS TCA 72 bp | TGTGAGCCTGTTGAAAGGTCCTTAGAGTTCAGCTCTTaGGAATCTGAAGGCCACTGTACAAAAGCAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: CEPVERSLEFSS*ESEGHCTKATP Trigger: AGGAGTTGCTTTTGTACAGTGGCCTTCAGATTCTCAAGAGCTGAACTCTAAGGACCTTTCAACAGGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 |
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| CDS CAA 72 bp | AAATTCCCAAGGAAAGATATTTTAGGTTGGCAGACATaGTTTTCTCTTCATTTGTCCGCCGTGCGGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: KFPRKDILGWQT*FSLHLSAVRLG Trigger: GCCGAGCCGCACGGCGGACAAATGAAGAGAAAACAATGTCTGCCAACCTAAAATATCTTTCCTTGGGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169530.2 |
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| CDS TCA 72 bp | CTAGAATACCGCATCGTTAGAACCAGACTGGTAGTCTaGAACACCAAAATTCCCAAGGAAAGATATTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: LEYRIVRTRLVV*NTKIPKERYFR Trigger: CCTAAAATATCTTTCCTTGGGAATTTTGGTGTTTCAGACTACCAGTCTGGTTCTAACGATGCGGTATTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 ENSMUST00000169530.2 ENSMUST00000196335.2 |
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| CDS GCA 72 bp | TTCAGGGTTTCCATGGGCTTATTAAGAATTTCATCATaGAGTACTCTATTCAGTGCTCTCACACTACACTTA | + |
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Preference number: 6 (lower is better) Translates to: FRVSMGLLRISS*STLFSALTLHL Trigger: TAAGTGTAGTGTGAGAGCACTGAATAGAGTACTGCATGATGAAATTCTTAATAAGCCCATGGAAACCCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 ENSMUST00000196335.2 |
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| CDS GCA 72 bp | TCACACTACACTTACTGTCTTTGTAGACTAAAAAGATaGAGGCCATTATCTTCAAAAATTCAGCCACAACCA | + |
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Preference number: 6 (lower is better) Translates to: SHYTYCLCRLKR*RPLSSKIQPQP Trigger: TGGTTGTGGCTGAATTTTTGAAGATAATGGCCTGCATCTTTTTAGTCTACAAAGACAGTAAGTGTAGTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029569.9 ENSMUST00000120120.8 ENSMUST00000153108.6 ENSMUST00000196335.2 |
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