Pregenerated sensors for SLC35A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031156Ensembl transcript IDs: ENSMUST00000096514.11, ENSMUST00000115660.12, ENSMUST00000115663.10, ENSMUST00000123277.8, ENSMUST00000153620.3, ENSMUST00000155967.3, ENSMUST00000207114.2, ENSMUST00000208397.2, ENSMUST00000208633.2, ENSMUST00000208640.2, ENSMUST00000208718.2
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCAAAGACAGCCCAGGCACCTTCCATGCATGCACTTAAGTGTGCGTaGACACATCCACACACATCCCCACGCGCGCGCGAACACACACAC | + |
Preference number: 1 (lower is better) Translates to: AKTAQAPSMHALKCA*THPHTSPRAREHTH Trigger: GTGTGTGTGTTCGCGCGCGCGTGGGGATGTGTGTGGATGTGTGCACGCACACTTAAGTGCATGCATGGAAGGTGCCTGGGCTGTCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR CCA 90 bp | CGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTaGGAGGGACTGTCCCAGGCATGCGAGACAGGACATCTCCAGCAC | + |
Preference number: 1 (lower is better) Translates to: RYWRAAGLLSSLQDG*EGLSQACETGHLQH Trigger: GTGCTGGAGATGTCCTGTCTCGCATGCCTGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR GCA 90 bp | GAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTaGAGGATGGCTGGGAGGGACTGTCCCAGGCATGCGAGACAGGAC | + |
Preference number: 1 (lower is better) Translates to: ESLVVIGELQGFYPV*RMAGRDCPRHARQD Trigger: GTCCTGTCTCGCATGCCTGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR CCA 90 bp | ATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAA | + |
Preference number: 1 (lower is better) Translates to: MRDRTSPAQGHGGKA*NSSTPTLFPKRLAQ Trigger: TTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR TCA 90 bp | TATTGGAAAGCAAATGGCACTTATTGCACCCTCCCCAAGATGAGCTaGTGCGAAATCCTCAGCTTGTGCCTCTCTCCTCGTTCCGGGCAC | + |
Preference number: 1 (lower is better) Translates to: YWKANGTYCTLPKMS*CEILSLCLSPRSGH Trigger: GTGCCCGGAACGAGGAGAGAGGCACAAGCTGAGGATTTCGCATCAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR TCA 90 bp | CAAACTATTGGAAAGCAAATGGCACTTATTGCACCCTCCCCAAGATaGGCTGATGCGAAATCCTCAGCTTGTGCCTCTCTCCTCGTTCCG | + |
Preference number: 1 (lower is better) Translates to: QTIGKQMALIAPSPR*ADAKSSACASLLVP Trigger: CGGAACGAGGAGAGAGGCACAAGCTGAGGATTTCGCATCAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCCAATAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR TCA 90 bp | AGGCCAGCATCTTCAAGTCCAGCAGCTACGACCCCTTCACCTTGGTaGGCAACCTGTGGTGAAAATGGGAAGGAAAGAGAAACACAGAAA | + |
Preference number: 1 (lower is better) Translates to: RPASSSPAATTPSPW*ATCGENGKERETQK Trigger: TTTCTGTGTTTCTCTTTCCTTCCCATTTTCACCACAGGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGATGCTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR GCA 90 bp | ATTCTGACACCCATCCTGAAAGGATGTTTTAAACGCCAATGGAGCTaGAGGCGGATCGGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAA | + |
Preference number: 1 (lower is better) Translates to: ILTPILKGCFKRQWS*RRIGSFSFCLDVSE Trigger: TTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCCATTGGCGTTTAAAACATCCTTTCAGGATGGGTGTCAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR CCA 90 bp | GCTGGTAGTAAGCTACTAATCTTGGAGTTAGTAATGGTGCTTATGTaGAAAGAGCAGGCCCCTGGGTCAGAAAGCTACACATGGACTAAA | + |
Preference number: 1 (lower is better) Translates to: AGSKLLILELVMVLM*KEQAPGSESYTWTK Trigger: TTTAGTCCATGTGTAGCTTTCTGACCCAGGGGCCTGCTCTTTCCACATAAGCACCATTACTAACTCCAAGATTAGTAGCTTACTACCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | GGGTCTCTGTACCGGGGAAACTGCCCCAAAGCCACAGCAGAGACCACGCTGTTGCATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACC | + |
Preference number: 2 (lower is better) Translates to: GSLYRGNCPKATAETTLLHGGKA*NSSTPT Trigger: GGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATG...CAACAGCGTGGTCTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAGAGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCCTGGCAACAACTTTTTaGACCTGCAGAAGCCCAACC | + |
Preference number: 2 (lower is better) Translates to: GELQGFYPVCRMAGRDCPLATTF*TCRSPT Trigger: GGTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAG...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR-3UTR TCA 90 bp | GGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCAGGAAGCGTTCATGTaGCATTCAGCCCTAGTTCCA | + |
Preference number: 2 (lower is better) Translates to: GPGQEGRTKTGQHLQVQQQEAFM*HSALVP Trigger: TGGAACTAGGGCTGAATGTCACATGAACGCTTCCTG...CTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | CACAGCAGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGCATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACC | + |
Preference number: 2 (lower is better) Translates to: HSRDHAVVMIQGDGAGEKHGGKA*NSSTPT Trigger: GGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATG...CTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCTGCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAATCCAGTCTGCAGGATaGCTGGGAGGGACTGTCCCA | + |
Preference number: 2 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGIQSAG*LGGTVP Trigger: TGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGAT...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR-3UTR CCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGACATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACC | + |
Preference number: 2 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGHGGKA*NSSTPT Trigger: GGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATG...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR-3UTR CCA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGCTGGCAACAACTTTTTaGACCTGCAGAAGCCCAACC | + |
Preference number: 2 (lower is better) Translates to: LVMSALCGAGVGKDREFPLATTF*TCRSPT Trigger: GGTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAG...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR GCA 90 bp | GATCCAGTGGCCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCACTGTACCGGGGAAACTaGCCCAAAGCCACAGCAGAG | + |
Preference number: 2 (lower is better) Translates to: DPVALFTYSKDSPGTFHALYRGN*PKATAE Trigger: CTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAG...TGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGGCCACTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | AGCAGCTACGACCCCTTCACCTTGGTGAGCAACAACAGGCTGATTGCTCTTCAACATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACC | + |
Preference number: 2 (lower is better) Translates to: SSYDPFTLVSNNRLIALQHGGKA*NSSTPT Trigger: GGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATG...TTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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3UTR-3UTR TCA 90 bp | TGGAGCTGCAGGCGGATCGGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAAGAGCTCCCCAAGATGAGCTaGTGCGAAATCCTCAGCTTG | + |
Preference number: 2 (lower is better) Translates to: WSCRRIGSFSFCLDVSEELPKMS*CEILSL Trigger: CAAGCTGAGGATTTCGCATCAGCTCATCTTGGGGAG...CTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAACAAAAGCCAGGCCCTaGCAACAACTTTTTGGACCT | + |
Preference number: 2 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGTKARP*QQLFGP Trigger: AGGTCCAAAAAGTTGTTGCCAGGGCCTGGCTTTTGT...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR-3UTR GCA 90 bp | GACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCATACTCGTTATTGGAGAGCTaGAGGGCTTTTATCCAGTCT | + |
Preference number: 2 (lower is better) Translates to: DHAVVMIQGDGAGEKTSYSLLES*RAFIQS Trigger: AGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGA...GTATGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR GCA 90 bp | CGAACACACACACACACACACATCTGGGATACAGTTAAGGAGTTAATAAGCTTTTCCAACCCAACCCCCTaGCCTGTTCCCCCAACCACC | + |
Preference number: 2 (lower is better) Translates to: RTHTHTHIWDTVKELISFSNPTP*PVPPTT Trigger: GGTGGTTGGGGGAACAGGGCAGGGGGTTGGGTTGGA...AAAGCTTATTAACTCCTTAACTGTATCCCAGATGTGTGTGTGTGTGTGTGTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCATCCCTCTAGAATTATaGGAGAAAATAAACCTCCAA | + |
Preference number: 2 (lower is better) Translates to: GELQGFYPVCRMAGRDCPIPLEL*EKINLQ Trigger: TTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGAT...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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3UTR-3UTR TCA 90 bp | AGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCAACACGCTGGATCATTaGTCTAATGATAGCACAAAC | + |
Preference number: 2 (lower is better) Translates to: RLVMSALCGAGVGKDREFNTLDH*SNDSTN Trigger: GTTTGTGCTATCATTAGATCAATGATCCAGCGTGTT...GAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR-3UTR TCA 90 bp | GAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGCAGGAAGCGTTCATGTaGCATTCAGCCCTAGTTCCA | + |
Preference number: 2 (lower is better) Translates to: ESLVVIGELQGFYPVCRMQEAFM*HSALVP Trigger: TGGAACTAGGGCTGAATGTCACATGAACGCTTCCTG...CATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | GACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCATACGTCATTAGTCGTTATTaGAGAGCTGCAGGGCTTTTA | + |
Preference number: 2 (lower is better) Translates to: DHAVVMIQGDGAGEKTSYVISRY*RAAGLL Trigger: TAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC...GTATGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | GTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCACAAAAGCCAGGCCCTaGCAACAACTTTTTGGACCT | + |
Preference number: 2 (lower is better) Translates to: VISRYWRAAGLLSSLQDGTKARP*QQLFGP Trigger: AGGTCCAAAAAGTTGTTGCCAGGGCCTGGCTTTTGT...GCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | ACACGCTGGATCATTGATCTAATGATAGCACAAACAAATCTCCATCCCAAACTAAGTCTGCAGGATGGCTaGGAGGGACTGTCCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: TRWIIDLMIAQTNLHPKLSLQDG*EGLSQA Trigger: TGCCTGGGACAGTCCCTCCCAGCCATCCTGCAGACT...TAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGATCAATGATCCAGCGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | CGCAGGTTCCATGTTTCATCAATTCTGACACCCATCCTGAAAGGATGTTTTAAAATCCAGTCTGCAGGATaGCTGGGAGGGACTGTCCCA | + |
Preference number: 2 (lower is better) Translates to: RRFHVSSILTPILKGCFKIQSAG*LGGTVP Trigger: TGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGAT...TTTAAAACATCCTTTCAGGATGGGTGTCAGAATTGATGAAACATGGAACCTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | GTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAATCCCTCTAGAATTATaGGAGAAAATAAACCTCCAA | + |
Preference number: 2 (lower is better) Translates to: VPVGPGQEGRTKTGQHLQIPLEL*EKINLQ Trigger: TTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGAT...TTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR CCA 90 bp | GATCCAGTGGCCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCAGTCATTAGTCGTTATTaGAGAGCTGCAGGGCTTTTA | + |
Preference number: 2 (lower is better) Translates to: DPVALFTYSKDSPGTFHAVISRY*RAAGLL Trigger: TAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC...TGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGGCCACTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | CAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCATCCCTCTAGAATTATaGGAGAAAATAAACCTCCAA | + |
Preference number: 2 (lower is better) Translates to: QQADCSSRVSVPGKLPQSIPLEL*EKINLQ Trigger: TTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGAT...GCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR-3UTR GCA 90 bp | ACACGCTGGATCATTGATCTAATGATAGCACAAACAAATCTCCATCCCAAACTAACAACTTTTTGGACCTaGAGAAGCCCAACCCCCTCC | + |
Preference number: 2 (lower is better) Translates to: TRWIIDLMIAQTNLHPKLTTFWT*RSPTPS Trigger: GGAGGGGGTTGGGCTTCTGCAGGTCCAAAAAGTTGT...TAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGATCAATGATCCAGCGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | TGTGGAAAGAGCAGGCCCCTGGGTCAGAAAGCTACACATGGACTAAATAAATACACACACACACACATCTaGGATACAGTTAAGGAGTTA | + |
Preference number: 2 (lower is better) Translates to: CGKSRPLGQKATHGLNKYTHTHI*DTVKEL Trigger: TAACTCCTTAACTGTATCCCAGATGTGTGTGTGTGT...GTATTTATTTAGTCCATGTGTAGCTTTCTGACCCAGGGGCCTGCTCTTTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | CGAACACACACACACACACACATCTGGGATACAGTTAAGGAGTTAATAAGCTTTACAAAAGCCAGGCCCTaGCAACAACTTTTTGGACCT | + |
Preference number: 2 (lower is better) Translates to: RTHTHTHIWDTVKELISFTKARP*QQLFGP Trigger: AGGTCCAAAAAGTTGTTGCCAGGGCCTGGCTTTTGT...AAAGCTTATTAACTCCTTAACTGTATCCCAGATGTGTGTGTGTGTGTGTGTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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3UTR CAA 90 bp | ATCATTGATCTAATGATAGCACAAACAAATCTCCATCCCAAACTATaGGAAAGCAAATGGCACTTATTGCACCCTCCCCAAGATGAGCTG | + |
Preference number: 2 (lower is better) Translates to: IIDLMIAQTNLHPKL*ESKWHLLHPPQDEL Trigger: CAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGATCAATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | CGCAGGTTCCATGTTTCATCAATTCTGACACCCATCCTGAAAGGATGTTTTAAAGTCATTAGTCGTTATTaGAGAGCTGCAGGGCTTTTA | + |
Preference number: 2 (lower is better) Translates to: RRFHVSSILTPILKGCFKVISRY*RAAGLL Trigger: TAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC...TTTAAAACATCCTTTCAGGATGGGTGTCAGAATTGATGAAACATGGAACCTGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR CCA 90 bp | TATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCATGCACTTAAGTGTTCCATCCCAAACTATTaGAAAGCAAATGGCACTTAT | + |
Preference number: 2 (lower is better) Translates to: YLHIAKTAQAPSMHALKCSIPNY*KANGTY Trigger: ATAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGA...ACACTTAAGTGCATGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR GCA 90 bp | ATGATAGCACAAACAAATCTCCATCCCAAACTATTGGAAAGCAAATGGCACTTATTACAACAGGCTGATTaGTCTTCAAGGGTCTCTGTA | + |
Preference number: 2 (lower is better) Translates to: MIAQTNLHPKLLESKWHLLQQAD*SSRVSV Trigger: TACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTAA...TAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR-3UTR GCA 90 bp | ATCATTGATCTAATGATAGCACAAACAAATCTCCATCCCAAACTATTGGAAAGCTTACAACAGGCTGATTaGTCTTCAAGGGTCTCTGTA | + |
Preference number: 2 (lower is better) Translates to: IIDLMIAQTNLHPKLLESLQQAD*SSRVSV Trigger: TACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTAA...GCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGATCAATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR GCA 72 bp | GCCCAGGCACCTTCCATGCATGCACTTAAGTGTGCGTaGACACATCCACACACATCCCCACGCGCGCGCGAA | + |
Preference number: 3 (lower is better) Translates to: AQAPSMHALKCA*THPHTSPRARE Trigger: TTCGCGCGCGCGTGGGGATGTGTGTGGATGTGTGCACGCACACTTAAGTGCATGCATGGAAGGTGCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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3UTR CCA 72 bp | TTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATaGCTGGGAGGGACTGTCCCAGGCATGCGAGACAGG | + |
Preference number: 3 (lower is better) Translates to: LESCRAFIQSAG*LGGTVPGMRDR Trigger: CCTGTCTCGCATGCCTGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR GCA 72 bp | GTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTaGAGGATGGCTGGGAGGGACTGTCCCAGGCATGCG | + |
Preference number: 3 (lower is better) Translates to: VVIGELQGFYPV*RMAGRDCPRHA Trigger: CGCATGCCTGGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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3UTR GCA 72 bp | CGACCCCTTCACCTTGGTGAGCAACAACAGGCTGATTaGTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCC | + |
Preference number: 3 (lower is better) Translates to: RPLHLGEQQQAD*SSRVSVPGKLP Trigger: GGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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3UTR CCA 72 bp | AGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTaGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGG | + |
Preference number: 3 (lower is better) Translates to: RTSPAQGHGGKA*NSSTPTLFPKR Trigger: CCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
3UTR-3UTR CAA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATACCTGGCAACAACTTTTaGGACCTGCAGAAGCCCAAC | + |
Preference number: 3 (lower is better) Translates to: ACETGHLQHRVMGERPGIPGNNF*DLQKPN Trigger: GTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAGG...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
3UTR TCA 72 bp | TGCCCCAAAGCCACAGCAGAGACCACGCTGTTGTCATaGTCCAGGGTGATGGTGCAGGAGAGAAGACCTCAT | + |
Preference number: 3 (lower is better) Translates to: CPKATAETTLLS*SRVMVQERRPH Trigger: ATGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCTGCTGTGGCTTTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
3UTR TCA 72 bp | GTGCCTCTCTCCTCGTTCCGGGCACTTACAACAGGCTaGTTGCTCTTCAAGGGTCTCTGTACCGGGGAAACT | + |
Preference number: 3 (lower is better) Translates to: VPLSSFRALTTG*LLFKGLCTGET Trigger: AGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTAAGTGCCCGGAACGAGGAGAGAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR GCA 72 bp | CTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTaGCCCAAAGCCACAGCAGAGACCACGCTGTTGTCA | + |
Preference number: 3 (lower is better) Translates to: LIALQGSLYRGN*PKATAETTLLS Trigger: TGACAACAGCGTGGTCTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
3UTR-3UTR CAA 90 bp | AGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCACCTGGCAACAACTTTTaGGACCTGCAGAAGCCCAAC | + |
Preference number: 3 (lower is better) Translates to: SWARARRENEDRPASSSPPGNNF*DLQKPN Trigger: GTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAGG...TGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
3UTR TCA 72 bp | GCAAATGGCACTTATTGCACCCTCCCCAAGATGAGCTaGTGCGAAATCCTCAGCTTGTGCCTCTCTCCTCGT | + |
Preference number: 3 (lower is better) Translates to: ANGTYCTLPKMS*CEILSLCLSPR Trigger: ACGAGGAGAGAGGCACAAGCTGAGGATTTCGCATCAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR TCA 72 bp | GGAAAGCAAATGGCACTTATTGCACCCTCCCCAAGATaGGCTGATGCGAAATCCTCAGCTTGTGCCTCTCTC | + |
Preference number: 3 (lower is better) Translates to: GKQMALIAPSPR*ADAKSSACASL Trigger: GAGAGAGGCACAAGCTGAGGATTTCGCATCAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR CCA 72 bp | GGAGCTGCAGGCGGATCGGCAGCTTTAGTTTTTGTCTaGATGTTTCTGAAGAGAATCCTTCGCCTCTGTCTC | + |
Preference number: 3 (lower is better) Translates to: GAAGGSAALVFV*MFLKRILRLCL Trigger: GAGACAGAGGCGAAGGATTCTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR-3UTR CAA 90 bp | ATGGTGCAGGAGAGAAGACCTCATACAATAGGAAATGAACCCCACGAGGAGTCACCTGGCAACAACTTTTaGGACCTGCAGAAGCCCAAC | + |
Preference number: 3 (lower is better) Translates to: MVQERRPHTIGNEPHEESPGNNF*DLQKPN Trigger: GTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAGG...TGACTCCTCGTGGGGTTCATTTCCTATTGTATGAGGTCTTCTCTCCTGCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
3UTR TCA 72 bp | TCTTCAAGTCCAGCAGCTACGACCCCTTCACCTTGGTaGGCAACCTGTGGTGAAAATGGGAAGGAAAGAGAA | + |
Preference number: 3 (lower is better) Translates to: SSSPAATTPSPW*ATCGENGKERE Trigger: TTCTCTTTCCTTCCCATTTTCACCACAGGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
||
3UTR TCA 72 bp | GATGGTGCAGGAGAGAAGACCTCATACAATAGGAAATaGACCCCACGAGGAGTCATTAGTCGTTATTGGAGA | + |
Preference number: 3 (lower is better) Translates to: DGAGEKTSYNRK*TPRGVISRYWR Trigger: TCTCCAATAACGACTAATGACTCCTCGTGGGGTTCATTTCCTATTGTATGAGGTCTTCTCTCCTGCACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
3UTR TCA 72 bp | AGGAGAGGAGAGTCCATCTATCAGGAAGCGTTCATGTaGCATTCAGCCCTAGTTCCATATCCCTCTAGAATT | + |
Preference number: 3 (lower is better) Translates to: RRGESIYQEAFM*HSALVPYPSRI Trigger: AATTCTAGAGGGATATGGAACTAGGGCTGAATGTCACATGAACGCTTCCTGATAGATGGACTCTCCTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
3UTR-3UTR CAA 90 bp | CCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCATGCACTTAAGCTCCATCCCAAACTATaGGAAAGCAAATGGCACTTA | + |
Preference number: 3 (lower is better) Translates to: PYLHIAKTAQAPSMHALKLHPKL*ESKWHL Trigger: TAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAG...CTTAAGTGCATGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR CCA 72 bp | CAAACAAATCTCCATCCCAAACTATTGGAAAGCAAATaGCACTTATTGCACCCTCCCCAAGATGAGCTGATG | + |
Preference number: 3 (lower is better) Translates to: QTNLHPKLLESK*HLLHPPQDELM Trigger: CATCAGCTCATCTTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAGATTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
3UTR-3UTR CAA 90 bp | CGAACACACACACACACACACATCTGGGATACAGTTAAGGAGTTAATAAGCTTTCTCCATCCCAAACTATaGGAAAGCAAATGGCACTTA | + |
Preference number: 3 (lower is better) Translates to: RTHTHTHIWDTVKELISFLHPKL*ESKWHL Trigger: TAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAG...AAAGCTTATTAACTCCTTAACTGTATCCCAGATGTGTGTGTGTGTGTGTGTTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
||
CDS-3UTR TCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATACCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGIPAPGF*SSGRGP Trigger: TGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGG...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | AGCAGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCCCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: SRDHAVVMIQGDGAGEKTPAPGF*SSGRGP Trigger: TGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGG...GGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
CDS-3UTR TCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCGGTAGACAGCACCAATaGCGAGCCCAGCGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: GELQGFYPVCRMAGRDCPGRQHQ*RAQRPG Trigger: CCCTGGGCGCTGGGCTCGTCATTGGTGCTGTCTACC...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCGAGGCTGCTGGTGAATaGAGGGCCCAGAGGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: GELQGFYPVCRMAGRDCPEAAGE*RAQRPR Trigger: CCTCGGCCTCTGGGCCCTGCATTCACCAGCAGCCTC...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
CDS-3UTR GCA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGGACTGGCCACGGCGGTaGCCTCAGCCCACCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: LVMSALCGAGVGKDREFPDWPRR*PQPTRA Trigger: GGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTC...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTAGACTGGCCACGGCGGTaGCCTCAGCCCACCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: YVGQGLVRTGSSRVYLTLDWPRR*PQPTRA Trigger: GGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTC...TAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCGGCCCACTGCAGGCGTaGGAGGCTGCGATTCAACAT | + |
Preference number: 4 (lower is better) Translates to: VGQGLVRTGSSRVYLTLPGPLQA*EAAIQH Trigger: ATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCC...GGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GATAAGAGTTTAGTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: DKSLVPVGPGQEGRTKTGPAPGF*SSGRGP Trigger: TGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGG...GCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGACTAAACTCTTATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTGAGGCTGCTGGTGAATaGAGGGCCCAGAGGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: VMSALCGAGVGKDREFPCEAAGE*RAQRPR Trigger: CCTCGGCCTCTGGGCCCTGCATTCACCAGCAGCCTC...ACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACAGCAGAGAGGCCCACTaGAGGCGTGAGAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHSREAH*RRERLR Trigger: TCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCT...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | ATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: MSALCGAGVGKDREFPCLQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...TAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCCACAGCAGAGACCACGCTGTTCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: RVSVPGKLPQSHSRDHAVPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...AACAGCGTGGTCTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAGAGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: GPGQEGRTKTGQHLQVQQPKKKP*LATAVP Trigger: GGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGG...CTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGAGGCTGCTGGTGAATaGAGGGCCCAGAGGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: VPVGPGQEGRTKTGQHLQEAAGE*RAQRPR Trigger: CCTCGGCCTCTGGGCCCTGCATTCACCAGCAGCCTC...TTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCCCCACCAGCTTGCTGTaGCTGGACAATGGCGACACC | + |
Preference number: 4 (lower is better) Translates to: GELQGFYPVCRMAGRDCPPTSLL*LDNGDT Trigger: GGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGG...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACAGAAGAAGCCTTGACTaGCCACGGCGGTGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHRRSLD*PRRCPQ Trigger: CTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCT...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCTCCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: ARARRENEDRPASSSPAAPKKKP*LATAVP Trigger: GGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGG...AGCTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCGGTAGACAGCACCAATaGCGAGCCCAGCGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: RLVMSALCGAGVGKDREFGRQHQ*RAQRPG Trigger: CCCTGGGCGCTGGGCTCGTCATTGGTGCTGTCTACC...GAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | CAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGAGAGGCCCACTaGAGGCGTGAGAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: QLGQGKKGERRQASIFKSSREAH*RRERLR Trigger: TCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCT...GGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATAAGCAGAGAGGCCCACTaGAGGCGTGAGAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGISREAH*RRERLR Trigger: TCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCT...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | GGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCCCACCAGCTTGCTGTaGCTGGACAATGGCGACACC | + |
Preference number: 4 (lower is better) Translates to: GPGQEGRTKTGQHLQVQQPTSLL*LDNGDT Trigger: GGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGG...CTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | CAAGGCAGAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTAGACTGGCCACGGCGGTaGCCTCAGCCCACCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: QGRGSSSKKLLQERRVHLDWPRR*PQPTRA Trigger: GGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTC...TAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTCTGCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | GTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: VGQGLVRTGSSRVYLTLPLESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...GGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTAGAAGAAGCCTTGACTaGCCACGGCGGTGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: VMSALCGAGVGKDREFPCRRSLD*PRRCPQ Trigger: CTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCT...ACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCTGGGAGGGACTGTCCCCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: GELQGFYPVCRMAGRDCPQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...GGGACAGTCCCTCCCAGCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
CDS-3UTR TCA 90 bp | CAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: QPYVGQGLVRTGSSRVYLQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...GAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
||
CDS-3UTR TCA 90 bp | CAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: QQADCSSRVSVPGKLPQSPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...GCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
CDS-3UTR TCA 90 bp | TGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCAGTTGGGCCACCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCA | + |
Preference number: 4 (lower is better) Translates to: CLPHPTPNTDKSLVPVGPPAPGF*SSGRGP Trigger: TGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGG...TGGCCCAACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCATACGGTAGACAGCACCAATaGCGAGCCCAGCGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: DHAVVMIQGDGAGEKTSYGRQHQ*RAQRPG Trigger: CCCTGGGCGCTGGGCTCGTCATTGGTGCTGTCTACC...GTATGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGCCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: GLVRTGSSRVYLTLPLILPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...CAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGCCACTCCCACCAGCTTaGTGTGCCTGGACAATGGCG | + |
Preference number: 4 (lower is better) Translates to: LVMSALCGAGVGKDREFPPLPPA*CAWTMA Trigger: CGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGG...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHGYGFD*TSGKAV Trigger: TACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATAAGAAGAAGCCTTGACTaGCCACGGCGGTGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGIRRSLD*PRRCPQ Trigger: CTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCT...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGACCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | CCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCTCACTTGACCAGCACTaGCTTTGGCAGAAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: PYVGQGLVRTGSSRVYLTSLDQH*LWQKGL Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTCAAGTGA...GGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CACCTTGGTGAGCAACAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGGGCCCACTGCAGGCGTaGGAGGCTGCGATTCAACAT | + |
Preference number: 4 (lower is better) Translates to: HLGEQQQADCSSRVSVPGGPLQA*EAAIQH Trigger: ATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCC...CCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGACCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | CTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: LCGAGVGKDREFPCLPHPGYGFD*TSGKAV Trigger: TACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...AGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GGGTCTCTGTACCGGGGAAACTGCCCCAAAGCCACAGCAGAGACCACGCTGTTGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAAG | + |
Preference number: 4 (lower is better) Translates to: GSLYRGNCPKATAETTLLMREAF*TTSTAK Trigger: CTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CAACAGCGTGGTCTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACATGAGGGAGGCATTCTaGACCACCAGCACAGCTAAG | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHMREAF*TTSTAK Trigger: CTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: VGQGLVRTGSSRVYLTLPSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...GGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCTCCAGCTTGCTGTGCCTaGACAATGGCGACACCAGTG | + |
Preference number: 4 (lower is better) Translates to: ARARRENEDRPASSSPAAPACCA*TMATPV Trigger: CACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGG...AGCTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCACCAGCTTGCTGTGCCTaGACAATGGCGACACCAGTG | + |
Preference number: 4 (lower is better) Translates to: WARARRENEDRPASSSPAPACCA*TMATPV Trigger: CACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGG...TGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGAGAAGAAGCCTTGACTaGCCACGGCGGTGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: GLVRTGSSRVYLTLPLILRRSLD*PRRCPQ Trigger: CTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCT...CAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: YVGQGLVRTGSSRVYLTLQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...TAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAGGCCCACTGCAGGCGTaGGAGGCTGCGATTCAACAT | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGGPLQA*EAAIQH Trigger: ATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCC...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | CAAGGCAGAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTACCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: QGRGSSSKKLLQERRVHLPKKKP*LATAVP Trigger: GGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGG...TAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTCTGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGACCCACCAGCTTGCTGTaGCTGGACAATGGCGACACC | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGPTSLL*LDNGDT Trigger: GGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGG...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | GTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: VGPGQEGRTKTGQHLQVQGYGFD*TSGKAV Trigger: TACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...CTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: QPYVGQGLVRTGSSRVYLSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...GAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: CGAGVGKDREFPCLPHPTSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...GGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | ATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: MSALCGAGVGKDREFPCLLESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...TAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCAGTTGGGCCACAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: CLPHPTPNTDKSLVPVGPQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...TGGCCCAACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCCGGGTTCTGATCCAGTaGCCGTGGGCCACTCCCACC | + |
Preference number: 4 (lower is better) Translates to: VISRYWRAAGLLSSLQDGRVLIQ*PWATPT Trigger: GGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCG...GCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGCAGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: SRDHAVVMIQGDGAGEKTQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...GGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATATCACTTGACCAGCACTaGCTTTGGCAGAAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGISLDQH*LWQKGL Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTCAAGTGA...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | CCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG | + |
Preference number: 4 (lower is better) Translates to: PYVGQGLVRTGSSRVYLTVRIFS*YVTWKV Trigger: CACTTTCCAGGTGACATATCAGCTGAAGATCCTGAC...GGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CAAGGCAGAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTAGGCCCACTGCAGGCGTaGGAGGCTGCGATTCAACAT | + |
Preference number: 4 (lower is better) Translates to: QGRGSSSKKLLQERRVHLGPLQA*EAAIQH Trigger: ATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCC...TAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTCTGCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | GTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTAAGCCACACAGAACCTaGGCTGCCTTTGAGGATCTT | + |
Preference number: 4 (lower is better) Translates to: VMSALCGAGVGKDREFPCKPHRT*AAFEDL Trigger: AAGATCCTCAAAGGCAGCTCAGGTTCTGTGTGGCTT...ACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | ATGGTGCAGGAGAGAAGACCTCATACAATAGGAAATGAACCCCACGAGGAGTCAGGTAGACAGCACCAATaGCGAGCCCAGCGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: MVQERRPHTIGNEPHEESGRQHQ*RAQRPG Trigger: CCCTGGGCGCTGGGCTCGTCATTGGTGCTGTCTACC...TGACTCCTCGTGGGGTTCATTTCCTATTGTATGAGGTCTTCTCTCCTGCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATCCACTCCCACCAGCTTaGTGTGCCTGGACAATGGCG | + |
Preference number: 4 (lower is better) Translates to: VGKDREFPCLPHPTPNTDPLPPA*CAWTMA Trigger: CGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGG...ATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTAATGAGGGAGGCATTCTaGACCACCAGCACAGCTAAG | + |
Preference number: 4 (lower is better) Translates to: YVGQGLVRTGSSRVYLTLMREAF*TTSTAK Trigger: CTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...TAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCATGCACTTAAGCAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: PYLHIAKTAQAPSMHALKQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...CTTAAGTGCATGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR CCA 90 bp | TGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCCAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: CRNSPKKYCKDSRSRGGPQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...GGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTCAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: IMGENKPPTHKSQALATTQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | GACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTACGGGTTCTGATCCAGTaGCCGTGGGCCACTCCCACC | + |
Preference number: 4 (lower is better) Translates to: DREFPCLPHPTPNTDKSLRVLIQ*PWATPT Trigger: GGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCG...TAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAG | + |
Preference number: 4 (lower is better) Translates to: GPGQEGRTKTGQHLQVQQSPPKA*FSTTPQ Trigger: CTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCT...CTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GAGGTGGGCCCATTAACAGAGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: EVGPLTEVSHVSPMWGRGSQRGE*RQQWTA Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...ACCCCTGCCCCACATAGGGCTGACATGACTAACCTCTGTTAATGGGCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: PSWARARRENEDRPASSSSQRGE*RQQWTA Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...ACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGCTTGGTGAGCAACTTTaGCAGAAAGGGCTCCGTGGT | + |
Preference number: 4 (lower is better) Translates to: LVMSALCGAGVGKDREFPLGEQL*QKGLRG Trigger: ACCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAG...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115663.10 ENSMUST00000153620.3 |
||
CDS-3UTR TCA 90 bp | CAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCAGGGCACCGCAAGCTTaGGTGTGTCCACATATTGGA | + |
Preference number: 4 (lower is better) Translates to: QQADCSSRVSVPGKLPQSRAPQA*VCPHIG Trigger: TCCAATATGTGGACACACTCAAGCTTGCGGTGCCCT...GCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCTCACTTGACCAGCACTaGCTTTGGCAGAAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: QQADCSSRVSVPGKLPQSSLDQH*LWQKGL Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTCAAGTGA...GCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCACCACCAGCTCTCACTTaGCCAGCACTGACTTTGGCA | + |
Preference number: 4 (lower is better) Translates to: RDHAVVMIQGDGAGEKTSPPALT*PALTLA Trigger: TGCCAAAGTCAGTGCTGGTCAAGTGAGAGCTGGTGG...TGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
||
CDS-3UTR TCA 90 bp | GGGTCTCTGTACCGGGGAAACTGCCCCAAAGCCACAGCAGAGACCACGCTGTTGAACCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA | + |
Preference number: 4 (lower is better) Translates to: GSLYRGNCPKATAETTLLNLSCL*GSSQSR Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGTT...CAACAGCGTGGTCTCTGCTGTGGCTTTGGGGCAGTTTCCCCGGTACAGAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | ATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTAAAGCCACACAGAACCTaGGCTGCCTTTGAGGATCTT | + |
Preference number: 4 (lower is better) Translates to: MSALCGAGVGKDREFPCLKPHRT*AAFEDL Trigger: AAGATCCTCAAAGGCAGCTCAGGTTCTGTGTGGCTT...TAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACTGTTGTCAGCATACTTaGCAACAACAGCCACCAGAA | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHCCQHT*QQQPPE Trigger: TTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACA...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
||
CDS-3UTR TCA 90 bp | TGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAAGGTGGCAAAGCCCTTaGGGATGTTGTCAGCATACT | + |
Preference number: 4 (lower is better) Translates to: WARARRENEDRPASSSPARWQSP*GCCQHT Trigger: AGTATGCTGACAACATCCTCAAGGGCTTTGCCACCT...TGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCACCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: EFPCLPHPTPNTDKSLVPPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...TGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GATGAGCTGATGCGAAATCCTCAGCTTGTGCCTCTCTCCTCGTTCCGGGCACTTACAACTTTTTGGACCTaGAGAAGCCCAACCCCCTCC | + |
Preference number: 4 (lower is better) Translates to: DELMRNPQLVPLSSFRALTTFWT*RSPTPS Trigger: GGAGGGGGTTGGGCTTCTGCAGGTCCAAAAAGTTGT...AAGTGCCCGGAACGAGGAGAGAGGCACAAGCTGAGGATTTCGCATCAGCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR GCA 90 bp | GAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTATCAGGAACCACTCCCACCAGCTTaGTGTGCCTGGACAATGGCG | + |
Preference number: 4 (lower is better) Translates to: EEAALKSSSRRGESIYQEPLPPA*CAWTMA Trigger: CGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGG...TTCCTGATAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | AGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCATGAGGGAGGCATTCTaGACCACCAGCACAGCTAAG | + |
Preference number: 4 (lower is better) Translates to: RLVMSALCGAGVGKDREFMREAF*TTSTAK Trigger: CTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...GAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGACTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGLESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | CAAGGCAGAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTACCAGCTTGCTGTGCCTaGACAATGGCGACACCAGTG | + |
Preference number: 4 (lower is better) Translates to: QGRGSSSKKLLQERRVHLPACCA*TMATPV Trigger: CACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGG...TAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTCTGCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTCGGGTTCTGATCCAGTaGCCGTGGGCCACTCCCACC | + |
Preference number: 4 (lower is better) Translates to: IMGENKPPTHKSQALATTRVLIQ*PWATPT Trigger: GGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCG...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | GACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCATACTCACTTGACCAGCACTaGCTTTGGCAGAAAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: DHAVVMIQGDGAGEKTSYSLDQH*LWQKGL Trigger: GAGCCCTTTCTGCCAAAGTCAGTGCTGGTCAAGTGA...GTATGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCCCCAAAGCAAGCCACACAGAACCTaGGCTGCCTTTGAGGATCTT | + |
Preference number: 4 (lower is better) Translates to: QQADCSSRVSVPGKLPQSKPHRT*AAFEDL Trigger: AAGATCCTCAAAGGCAGCTCAGGTTCTGTGTGGCTT...GCTTTGGGGCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | GATCCAGTGGCCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCAGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: DPVALFTYSKDSPGTFHAGYGFD*TSGKAG Trigger: TCCAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...TGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGGCCACTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR GCA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTCCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: IMGENKPPTHKSQALATTPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | GCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCAAGCAGAGAGGCCCACTaGAGGCGTGAGAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: AETHLRNTVKIAGVEVGPSREAH*RRERLR Trigger: TCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCT...TGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: ALCGAGVGKDREFPCLPHLMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...GTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | AACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACCAGCTGCGGTGGTGGTaGCTGCCCAGGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: NSPKKYCKDSRSRGGPINQLRWW*LPRRLL Trigger: CAGCAGCCTCCTGGGCAGCCACCACCACCGCAGCTG...GTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGCGGGTTCTGATCCAGTaGCCGTGGGCCACTCCCACC | + |
Preference number: 4 (lower is better) Translates to: HLRNTVKIAGVEVGPLTERVLIQ*PWATPT Trigger: GGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCG...CTCTGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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3UTR CAA 72 bp | AGCATCTTCAAGTCCAGCAGCTACGACCCCTTCACCTaGGTGAGCAACAACAGGCTGATTGCTCTTCAAGGG | + |
Preference number: 4 (lower is better) Translates to: SIFKSSSYDPFT*VSNNRLIALQG Trigger: CCCTTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: HLRNTVKIAGVEVGPLTEPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...CTCTGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TTTAGTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG | + |
Preference number: 4 (lower is better) Translates to: FSPSWARARRENEDRPASVRIFS*YVTWKV Trigger: CACTTTCCAGGTGACATATCAGCTGAAGATCCTGAC...AGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATAAACCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGINLSCL*GSSQSR Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGTT...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | GTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAATGTTGTCAGCATACTTaGCAACAACAGCCACCAGAA | + |
Preference number: 4 (lower is better) Translates to: VPVGPGQEGRTKTGQHLQCCQHT*QQQPPE Trigger: TTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACA...TTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CGCCTCTGTCTCGTCAATTACATGAGATTCAGCCACTTCAAGGACCTCCCCTCCAGGTGGCAAAGCCCTTaGGGATGTTGTCAGCATACT | + |
Preference number: 4 (lower is better) Translates to: RLCLVNYMRFSHFKDLPSRWQSP*GCCQHT Trigger: AGTATGCTGACAACATCCTCAAGGGCTTTGCCACCT...GGAGGGGAGGTCCTTGAAGTGGCTGAATCTCATGTAATTGACGAGACAGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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CDS-3UTR GCA 90 bp | GAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAGAGGCTGCTGGTGAATaGAGGGCCCAGAGGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: ETHLRNTVKIAGVEVGPLEAAGE*RAQRPR Trigger: CCTCGGCCTCTGGGCCCTGCATTCACCAGCAGCCTC...TAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | ACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGGCTGCTGGTGAATaGAGGGCCCAGAGGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: THLRNTVKIAGVEVGPLTEAAGE*RAQRPR Trigger: CCTCGGCCTCTGGGCCCTGCATTCACCAGCAGCCTC...TGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TTCCCGTGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCAGTTCCCACCAGCTTGCTGTaGCTGGACAATGGCGACACC | + |
Preference number: 4 (lower is better) Translates to: FPCLPHPTPNTDKSLVPVPTSLL*LDNGDT Trigger: GGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGG...AACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | AGGCTGCGATTCAACATGAGCACAGAGAAGAGCGCTGTAGTCAGGATCTTCAGCACAGCCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: RLRFNMSTEKSAVVRIFSTAPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGCTGT...GCTGAAGATCCTGACTACAGCGCTCTTCTCTGTGCTCATGTTGAATCGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS-3UTR CCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | TTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATACTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: LVRTGSSRVYLTLPLILILESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...TATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTATCAGGAACTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: EEAALKSSSRRGESIYQELESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...TTCCTGATAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | GGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGAATAATGGGTCCAGGTaGAAGCCAAAGAGGCGAATG | + |
Preference number: 4 (lower is better) Translates to: GLVRTGSSRVYLTLPLILNNGSR*KPKRRM Trigger: CATTCGCCTCTTTGGCTTCCACCTGGACCCATTATT...CAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CGTGAGAGGCTGCGATTCAACATGAGCACAGAGAAGAGCGCTGTAGTCAGGATCAGTGTGTCCACATATTaGACCAGGACAGCCCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RERLRFNMSTEKSAVVRISVSTY*TRTAPL Trigger: AAGAGGGGCTGTCCTGGTCCAATATGTGGACACACT...GATCCTGACTACAGCGCTCTTCTCTGTGCTCATGTTGAATCGCAGCCTCTCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS-3UTR TCA 90 bp | TGGAGCTGCAGGCGGATCGGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAAGAGAGGGCACCGCAAGCTTaGGTGTGTCCACATATTGGA | + |
Preference number: 4 (lower is better) Translates to: WSCRRIGSFSFCLDVSEERAPQA*VCPHIG Trigger: TCCAATATGTGGACACACTCAAGCTTGCGGTGCCCT...CTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR TCA 90 bp | GAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: ESLVVIGELQGFYPVCRMQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...CATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: RNSPKKYCKDSRSRGGPIPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...AATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCTCAGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG | + |
Preference number: 4 (lower is better) Translates to: RDHAVVMIQGDGAGEKTSVRIFS*YVTWKV Trigger: CACTTTCCAGGTGACATATCAGCTGAAGATCCTGAC...TGAGGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
||
CDS-3UTR TCA 90 bp | AGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCAACCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA | + |
Preference number: 4 (lower is better) Translates to: RLVMSALCGAGVGKDREFNLSCL*GSSQSR Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGTT...GAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CAAGGCAGAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTAAGGTGGCAAAGCCCTTaGGGATGTTGTCAGCATACT | + |
Preference number: 4 (lower is better) Translates to: QGRGSSSKKLLQERRVHLRWQSP*GCCQHT Trigger: AGTATGCTGACAACATCCTCAAGGGCTTTGCCACCT...TAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTCTGCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | AAAAATAAAGATCCAGTGGCCCTATTTACATATAGCAAAGACAGCCCAGGCACCCCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: KNKDPVALFTYSKDSPGTPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...GGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGGCCACTGGATCTTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR GCA 90 bp | AGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTCCTCGAGAAGACAGCTaGGGTGGTGGTGGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: RNSPKKYCKDSRSRGGPIPREDS*GGGGCP Trigger: TGGGCAGCCACCACCACCGCAGCTGTCTTCTCGAGG...AATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TCTAATGATAGCACAAACAAATCTCCATCCCAAACTATTGGAAAGCAAATGGCAGACTGGCCACGGCGGTaGCCTCAGCCCACCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: SNDSTNKSPSQTIGKQMADWPRR*PQPTRA Trigger: GGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTC...TGCCATTTGCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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CDS-3UTR CCA 90 bp | AGCAGCTACGACCCCTTCACCTTGGTGAGCAACAACAGGCTGATTGCTCTTCAAAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: SSYDPFTLVSNNRLIALQSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...TTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | ATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: MSALCGAGVGKDREFPCLLMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...TAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGCTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: LVMSALCGAGVGKDREFPLMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: VGPGQEGRTKTGQHLQVQLMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...CTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GCATGCGAGACAGGACATCTCCAGCACAGGGTCATGGGGGAAAGGCCTGGAATACTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: ACETGHLQHRVMGERPGILMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...TATTCCAGGCCTTTCCCCCATGACCCTGTGCTGGAGATGTCCTGTCTCGCATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | GAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTATCAGGAAAAGCCACACAGAACCTaGGCTGCCTTTGAGGATCTT | + |
Preference number: 4 (lower is better) Translates to: EEAALKSSSRRGESIYQEKPHRT*AAFEDL Trigger: AAGATCCTCAAAGGCAGCTCAGGTTCTGTGTGGCTT...TTCCTGATAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGPKKKP*LATAVP Trigger: GGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGG...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGATGTTGTCAGCATACTTaGCAACAACAGCCACCAGAA | + |
Preference number: 4 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGCCQHT*QQQPPE Trigger: TTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACA...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR GCA 90 bp | GAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTACCACTCCCACCAGCTTaGTGTGCCTGGACAATGGCG | + |
Preference number: 4 (lower is better) Translates to: ETHLRNTVKIAGVEVGPLPLPPA*CAWTMA Trigger: CGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGG...TAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: IMGENKPPTHKSQALATTGYGFD*TSGKAV Trigger: TACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | TTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATAAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: LVRTGSSRVYLTLPLILISVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...TATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CCCTATTTACATATAGCAAAGACAGCCCAGGCACCTTCCATGCATGCACTTAAGCTGGAAAGTGGCAGCTaGCAGGTTGCTGATGGCAAC | + |
Preference number: 4 (lower is better) Translates to: PYLHIAKTAQAPSMHALKLESGS*QVADGN Trigger: GTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAG...CTTAAGTGCATGCATGGAAGGTGCCTGGGCTGTCTTTGCTATATGTAAATAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR CCA 90 bp | GTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGGCAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAG | + |
Preference number: 4 (lower is better) Translates to: VISRYWRAAGLLSSLQDGSPPKA*FSTTPQ Trigger: CTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCT...GCCATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: PSRIMGENKPPTHKSQALSQRGE*RQQWTA Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...CAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | TGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCAGTTGGGCCACTTGGTGAGCAACTTTaGCAGAAAGGGCTCCGTGGT | + |
Preference number: 4 (lower is better) Translates to: CLPHPTPNTDKSLVPVGPLGEQL*QKGLRG Trigger: ACCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAG...TGGCCCAACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115663.10 |
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CDS-3UTR TCA 90 bp | TGTCTACCTCACCCTACCCCTAATACTGATAAGAGTTTAGTCCCAGTTGGGCCAAGGTGGCAAAGCCCTTaGGGATGTTGTCAGCATACT | + |
Preference number: 4 (lower is better) Translates to: CLPHPTPNTDKSLVPVGPRWQSP*GCCQHT Trigger: AGTATGCTGACAACATCCTCAAGGGCTTTGCCACCT...TGGCCCAACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGGTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | TTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: FAETHLRNTVKIAGVEVGGYGFD*TSGKAG Trigger: TCCAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCC...GCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153620.3 |
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CDS-3UTR CCA 90 bp | ATGGTGCAGGAGAGAAGACCTCATACAATAGGAAATGAACCCCACGAGGAGTCACTGGCAACAACTTTTTaGACCTGCAGAAGCCCAACC | + |
Preference number: 4 (lower is better) Translates to: MVQERRPHTIGNEPHEESLATTF*TCRSPT Trigger: GGTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAG...TGACTCCTCGTGGGGTTCATTTCCTATTGTATGAGGTCTTCTCTCCTGCACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR CCA 90 bp | AACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACCCAGCTTGCTGTGCCTaGACAATGGCGACACCAGTG | + |
Preference number: 4 (lower is better) Translates to: NSPKKYCKDSRSRGGPINPACCA*TMATPV Trigger: CACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGG...GTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAG | + |
Preference number: 4 (lower is better) Translates to: PSRIMGENKPPTHKSQALSPPKA*FSTTPQ Trigger: CTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCT...CAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CCA 90 bp | TGGAGCTGCAGGCGGATCGGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAAGAGAATAATGGGTCCAGGTaGAAGCCAAAGAGGCGAATG | + |
Preference number: 4 (lower is better) Translates to: WSCRRIGSFSFCLDVSEENNGSR*KPKRRM Trigger: CATTCGCCTCTTTGGCTTCCACCTGGACCCATTATT...CTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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CDS-3UTR CCA 90 bp | GAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTATCAGGAAAATAATGGGTCCAGGTaGAAGCCAAAGAGGCGAATG | + |
Preference number: 4 (lower is better) Translates to: EEAALKSSSRRGESIYQENNGSR*KPKRRM Trigger: CATTCGCCTCTTTGGCTTCCACCTGGACCCATTATT...TTCCTGATAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | CACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGAGGGCACCGCAAGCTTaGGTGTGTCCACATATTGGA | + |
Preference number: 4 (lower is better) Translates to: HLRNTVKIAGVEVGPLTERAPQA*VCPHIG Trigger: TCCAATATGTGGACACACTCAAGCTTGCGGTGCCCT...CTCTGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | AGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: RNSPKKYCKDSRSRGGPIQLAGC*WQHTGG Trigger: ACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTG...AATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TTATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: LFAETHLRNTVKIAGVEVPRLWL*LHLGEG Trigger: GCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGG...CACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | TTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCACCCCTTCACCTTGGTaGGCAACCTGGAAAGTGGCA | + |
Preference number: 4 (lower is better) Translates to: FAETHLRNTVKIAGVEVGTPSPW*ATWKVA Trigger: TGCCACTTTCCAGGTTGCTCACCAAGGTGAAGGGGT...GCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123277.8 |
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CDS-3UTR GCA 90 bp | CCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGATTACCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: PSRIMGENKPPTHKSQALITPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAAT...CAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | GAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCAGGATGACAAAAGCCAGGCCCTaGCAACAACTTTTTGGACCT | + |
Preference number: 4 (lower is better) Translates to: ESLVVIGELQGFYPVCRMTKARP*QQLFGP Trigger: AGGTCCAAAAAGTTGTTGCCAGGGCCTGGCTTTTGT...CATCCTGCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR TCA 90 bp | AGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAGGGCACCGCAAGCTTaGGTGTGTCCACATATTGGA | + |
Preference number: 4 (lower is better) Translates to: RNSPKKYCKDSRSRGGPIRAPQA*VCPHIG Trigger: TCCAATATGTGGACACACTCAAGCTTGCGGTGCCCT...AATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | CATCATCTTTATTTGGCATTGGGTATCCTGACATTTGTTCATTACAGTTCCTTATCCAACCCAACCCCCTaGCCTGTTCCCCCAACCACC | + |
Preference number: 4 (lower is better) Translates to: HHLYLALGILTFVHYSSLSNPTP*PVPPTT Trigger: GGTGGTTGGGGGAACAGGGCAGGGGGTTGGGTTGGA...TAAGGAACTGTAATGAACAAATGTCAGGATACCCAATGCCAAATAAAGATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR CCA 90 bp | CACGAGGAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCCTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: HEESLVVIGELQGFYPVCLMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...GCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTCCTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | ACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAAGCCAAAGAGGCGAATaGAGGCAACAGTGGACAGCA | + |
Preference number: 4 (lower is better) Translates to: THLRNTVKIAGVEVGPLTSQRGE*RQQWTA Trigger: TGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCT...TGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGAGGGCACCGCAAGCTTaGGTGTGTCCACATATTGGA | + |
Preference number: 4 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGRAPQA*VCPHIG Trigger: TCCAATATGTGGACACACTCAAGCTTGCGGTGCCCT...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTAACCTGAGCTGCCTTTaGGGATCTTCTCAAAGTAGA | + |
Preference number: 4 (lower is better) Translates to: IMGENKPPTHKSQALATTNLSCL*GSSQSR Trigger: TCTACTTTGAGAAGATCCTCAAAGGCAGCTCAGGTT...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGACCCCTTCACCTTGGTaGGCAACTTTGGCAGAAAGG | + |
Preference number: 4 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGTPSPW*ATLAER Trigger: CCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGGT...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115663.10 ENSMUST00000153620.3 |
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CDS-3UTR GCA 90 bp | GGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAAGAGAATCCTTCGCCTCTGTCTATTACCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: GSFSFCLDVSEENPSPLSITPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAAT...AGACAGAGGCGAAGGATTCTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR CCA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGATGAGGGAGGCATTCTaGACCACCAGCACAGCTAAG | + |
Preference number: 4 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGMREAF*TTSTAK Trigger: CTTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCAT...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR GCA 90 bp | AACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACATTACCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: NSPKKYCKDSRSRGGPINITPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAAT...GTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CGCAGGTTCCATGTTTCATCAATTCTGACACCCATCCTGAAAGGATGTTTTAAAAGTGTGTCCACATATTaGACCAGGACAGCCTCATGG | + |
Preference number: 4 (lower is better) Translates to: RRFHVSSILTPILKGCFKSVSTY*TRTASW Trigger: CCATGAGGCTGTCCTGGTCCAATATGTGGACACACT...TTTAAAACATCCTTTCAGGATGGGTGTCAGAATTGATGAAACATGGAACCTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR TCA 90 bp | TTCCATATCCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCGTCAGGATCTTCAGCTaGTATGTCACCTGGAAAGTG | + |
Preference number: 4 (lower is better) Translates to: FHIPLELWEKINLQPTKAVRIFS*YVTWKV Trigger: CACTTTCCAGGTGACATATCAGCTGAAGATCCTGAC...GGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGATATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR TCA 90 bp | TTATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGACCCCTTCACCTTGGTaGGCAACTTTGGCAGAAAGG | + |
Preference number: 4 (lower is better) Translates to: LFAETHLRNTVKIAGVEVTPSPW*ATLAER Trigger: CCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGGT...CACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115663.10 ENSMUST00000153620.3 |
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CDS-3UTR GCA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGATTACCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGITPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAAT...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGCTGATGGCAACATACTaGAGGTTATTCTGCAAGGTA | + |
Preference number: 4 (lower is better) Translates to: HLRNTVKIAGVEVGPLTELMATY*RLFCKV Trigger: TACCTTGCAGAATAACCTCCAGTATGTTGCCATCAG...CTCTGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR TCA 90 bp | CGCAGGTTCCATGTTTCATCAATTCTGACACCCATCCTGAAAGGATGTTTTAAATGTTGTCAGCATACTTaGCAACAACAGCCACCAGAA | + |
Preference number: 4 (lower is better) Translates to: RRFHVSSILTPILKGCFKCCQHT*QQQPPE Trigger: TTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACA...TTTAAAACATCCTTTCAGGATGGGTGTCAGAATTGATGAAACATGGAACCTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
||
3UTR CAA 72 bp | CTAATGATAGCACAAACAAATCTCCATCCCAAACTATaGGAAAGCAAATGGCACTTATTGCACCCTCCCCAA | + |
Preference number: 4 (lower is better) Translates to: LMIAQTNLHPKL*ESKWHLLHPPQ Trigger: TTGGGGAGGGTGCAATAAGTGCCATTTGCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR GCA 90 bp | TTATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGATTACCCCTCTTTTGTaGGAAGAGCAGCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: LFAETHLRNTVKIAGVEVITPLL*EEQQET Trigger: TGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAAT...CACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CCA 90 bp | CATCATCTTTATTTGGCATTGGGTATCCTGACATTTGTTCATTACAGTTCCTTAAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAG | + |
Preference number: 4 (lower is better) Translates to: HHLYLALGILTFVHYSSLSPPKA*FSTTPQ Trigger: CTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCT...TAAGGAACTGTAATGAACAAATGTCAGGATACCCAATGCCAAATAAAGATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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CDS TCA 90 bp | GAGAGACAGGAGGCCACAACTGCCGCTAAGCCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCACTCCCACCAGCTTGCTGTGCCTGG | + |
Preference number: 5 (lower is better) Translates to: ERQEATTAAKPAPGF*SSGRGPLPPACCAW Trigger: CCAGGCACAGCAAGCTGGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGGCTTAGCGGCAGTTGTGGCCTCCTGTCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS GCA 90 bp | CGGCGGTGCCCTCAGCCCACCAGAGCCCCACCAGGCCCAGCGCTGTaGCAAAGAGGCCGAGCTGTAGGTTACGAAGCCACACAGAACCTG | + |
Preference number: 5 (lower is better) Translates to: RRCPQPTRAPPGPAL*QRGRAVGYEATQNL Trigger: CAGGTTCTGTGTGGCTTCGTAACCTACAGCTCGGCCTCTTTGGCACAGCGCTGGGCCTGGTGGGGCTCTGGTGGGCTGAGGGCACCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
CDS CCA 90 bp | CTACACCCCAGACAGCAGGTGTGTACCCAAAGAAGAAGCCTTGACTaGCCACGGCGGTGCCCTCAGCCCACCAGAGCCCCACCAGGCCCA | + |
Preference number: 5 (lower is better) Translates to: LHPRQQVCTQRRSLD*PRRCPQPTRAPPGP Trigger: TGGGCCTGGTGGGGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGGGTACACACCTGCTGTCTGGGGTGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS TCA 90 bp | AGTACTACACCCCAGACAGCAGGTGTGTACCCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCCTCAGCCCACCAGAGCCCCACCAGG | + |
Preference number: 5 (lower is better) Translates to: STTPQTAGVYPKKKP*LATAVPSAHQSPTR Trigger: CCTGGTGGGGCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGGGTACACACCTGCTGTCTGGGGTGTAGTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 |
||
CDS-3UTR CAA 90 bp | TGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: CGAGVGKDREFPCLPHPTAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...GGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS GCA 90 bp | GTGAATGCAGGGCCCAGAGGCCGAGGCCGAGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTAGAGGTAGACAGCACCAATGACGAG | + |
Preference number: 5 (lower is better) Translates to: VNAGPRGRGRGYGFD*TSGKAVEVDSTNDE Trigger: CTCGTCATTGGTGCTGTCTACCTCTACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGCCTCGGCCTCTGGGCCCTGCATTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS-3UTR CAA 90 bp | GCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAGCAGCTGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: ARARRENEDRPASSSPAAAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...AGCTGCTGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS TCA 90 bp | TTCTGGACCACCAGCACAGCTAAGGATATATACTTGAGGCGCCGGTaGGCCGCTGTAGTGGACCCAGGTTCCAACGCGCCCGAGGACACA | + |
Preference number: 5 (lower is better) Translates to: FWTTSTAKDIYLRRR*AAVVDPGSNAPEDT Trigger: TGTGTCCTCGGGCGCGTTGGAACCTGGGTCCACTACAGCGGCTCACCGGCGCCTCAAGTATATATCCTTAGCTGTGCTGGTGGTCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208640.2 |
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CDS TCA 90 bp | GGCGACACCAGTGAAGAGCAGCAGCAGAGAGGCCCACTGCAGGCGTaGGAGGCTGCGATTCAACATGAGCACAGAGAAGAGCGCTGTAGT | + |
Preference number: 5 (lower is better) Translates to: GDTSEEQQQRGPLQA*EAAIQHEHREERCS Trigger: ACTACAGCGCTCTTCTCTGTGCTCATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCTGCTGCTCTTCACTGGTGTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS-3UTR CAA 90 bp | GTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCACATTACCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: VGQGLVRTGSSRVYLTLPHITPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGTAATGTG...GGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | TTTAGTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: FSPSWARARRENEDRPASAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...AGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGACTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS GCA 90 bp | TGGACAATGGCGACACCAGTGAAGAGCAGCAGCAGAGAGGCCCACTaGAGGCGTGAGAGGCTGCGATTCAACATGAGCACAGAGAAGAGC | + |
Preference number: 5 (lower is better) Translates to: WTMATPVKSSSREAH*RRERLRFNMSTEKS Trigger: GCTCTTCTCTGTGCTCATGTTGAATCGCAGCCTCTCACGCCTGCAGTGGGCCTCTCTGCTGCTGCTCTTCACTGGTGTCGCCATTGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS GCA 90 bp | TCCACATATTGGACCAGGACAGCCTCATGGAGGAAGAGGACCAGGTaGTTCACATTACCCGCTGTAGTGGACCCAGGTTCCAACGCGCCC | + |
Preference number: 5 (lower is better) Translates to: STYWTRTASWRKRTR*FTLPAVVDPGSNAP Trigger: GGGCGCGTTGGAACCTGGGTCCACTACAGCGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208397.2 |
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CDS CCA 90 bp | GCACCAATGACGAGCCCAGCGCCCAGGGCAAATAATGGGTCCAGGTaGAAGCCAAAGAGGCGAATGGAGGCAACAGTGGACAGCACAATA | + |
Preference number: 5 (lower is better) Translates to: APMTSPAPRANNGSR*KPKRRMEATVDSTI Trigger: TATTGTGCTGTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACCTGGACCCATTATTTGCCCTGGGCGCTGGGCTCGTCATTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS-3UTR CAA 90 bp | CTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: LCGAGVGKDREFPCLPHPECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...AGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | ATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGTGTCTAGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: MSALCGAGVGKDREFPCLEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...TAGACACGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | TTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCCCGGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: LVMSALCGAGVGKDREFPECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...CGGGAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | AGGTTAGTCATGTCAGCCCTATGTGGGGCAGGGGTTGGTAAGGACAGGGAGTTCGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: RLVMSALCGAGVGKDREFEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...GAACTCCCTGTCCTTACCAACCCCTGCCCCACATAGGGCTGACATGACTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | CACGAGGAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: HEESLVVIGELQGFYPVCAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...GCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTCCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS CCA 90 bp | ACCGCAAGCTTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCCGCTGTAGTGGAC | + |
Preference number: 5 (lower is better) Translates to: TASLSVSTYWTRTAS*RKRTRCFTLPAVVD Trigger: GTCCACTACAGCGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | AGCAGAGACCACGCTGTTGTCATGATCCAGGGTGATGGTGCAGGAGAGAAGACCCACATTACCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: SRDHAVVMIQGDGAGEKTHITPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGTAATGTG...GGTCTTCTCTCCTGCACCATCACCCTGGATCATGACAACAGCGTGGTCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | GTGAGCAACAACAGGCTGATTGCTCTTCAAGGGTCTCTGTACCGGGGAAACTGCGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: VSNNRLIALQGSLYRGNCEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...GCAGTTTCCCCGGTACAGAGACCCTTGAAGAGCAATCAGCCTGTTGTTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | CCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCCACTCCCACCAGCTaGCTGTGCCTGGACAATGGC | + |
Preference number: 5 (lower is better) Translates to: PSRIMGENKPPTHKSQALATPTS*LCLDNG Trigger: GCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGGC...CAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS CCA 90 bp | ACCGCAAGCTTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCCCTCTTTTGTGCG | + |
Preference number: 5 (lower is better) Translates to: TASLSVSTYWTRTAS*RKRTRCFTLPLFCA Trigger: CGCACAAAAGAGGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000208633.2 |
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CDS-3UTR CAA 90 bp | GATAAGAGTTTAGTCCCAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCACATTACCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: DKSLVPVGPGQEGRTKTGHITPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGTAATGTG...GCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTGGGACTAAACTCTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | GCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCAGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: AETHLRNTVKIAGVEVGPAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...TGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | ATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAGGCCCTGGCAACAACTGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: IMGENKPPTHKSQALATTAEAMA*TAPRGR Trigger: CCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGC...AGTTGTTGCCAGGGCCTGGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | GAGCACAGAGAAGAGCGCTGTAGTCAGGATCTTCAGCTGATATGTCACCTGGAAAGGACAGCCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: EHREERCSQDLQLICHLERTAPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGCTGTCCT...TTCCAGGTGACATATCAGCTGAAGATCCTGACTACAGCGCTCTTCTCTGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS-3UTR CAA 90 bp | GTTGGTAAGGACAGGGAGTTCCCGTGTCTACCTCACCCTACCCCTAATACTGATGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: VGKDREFPCLPHPTPNTDECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...ATCAGTATTAGGGGTAGGGTGAGGTAGACACGGGAACTCCCTGTCCTTACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | GAGGAAGCAGCTCTAAAAAGCTCCTCCAGGAGAGGAGAGTCCATCTATCAGGAAGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: EEAALKSSSRRGESIYQEEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...TTCCTGATAGATGGACTCTCCTCTCCTGGAGGAGCTTTTTAGAGCTGCTTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | CAGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCATGTTGTCAGCATACTaGACAACAACAGCCACCAGA | + |
Preference number: 5 (lower is better) Translates to: QLGQGKKGERRQASIFKSMLSAY*TTTATR Trigger: TCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACAT...GGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS CCA 90 bp | ACCGCAAGCTTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCTTTGAGCACTTCA | + |
Preference number: 5 (lower is better) Translates to: TASLSVSTYWTRTAS*RKRTRCFTLPLSTS Trigger: TGAAGTGCTCAAAGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207114.2 |
||
CDS-3UTR CAA 90 bp | CACGAGGAGTCATTAGTCGTTATTGGAGAGCTGCAGGGCTTTTATCCAGTCTGCCACATTACCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: HEESLVVIGELQGFYPVCHITPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGTAATGTG...GCAGACTGGATAAAAGCCCTGCAGCTCTCCAATAACGACTAATGACTCCTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | CACAGAGAAGAGCGCTGTAGTCAGGATCTTCAGCTGATATGTCACCTGGAAAGTGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: HREERCSQDLQLICHLESEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...ACTTTCCAGGTGACATATCAGCTGAAGATCCTGACTACAGCGCTCTTCTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS-3UTR CAA 90 bp | TGGAGCTGCAGGCGGATCGGCAGCTTTAGTTTTTGTCTGGATGTTTCTGAAGAGCCTGGCAACAACTTTTaGGACCTGCAGAAGCCCAAC | + |
Preference number: 5 (lower is better) Translates to: WSCRRIGSFSFCLDVSEEPGNNF*DLQKPN Trigger: GTTGGGCTTCTGCAGGTCCAAAAAGTTGTTGCCAGG...CTCTTCAGAAACATCCAGACAAAAACTAAAGCTGCCGATCCGCCTGCAGCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096514.11 |
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CDS-3UTR CAA 90 bp | TTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCGCCACTCCCACCAGCTaGCTGTGCCTGGACAATGGC | + |
Preference number: 5 (lower is better) Translates to: FAETHLRNTVKIAGVEVGATPTS*LCLDNG Trigger: GCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGGC...GCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | AGTTGGGCCAGGGCAAGAAGGGAGAACGAAGACAGGCCAGCATCTTCAAGTCCAAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACA | + |
Preference number: 5 (lower is better) Translates to: SWARARRENEDRPASSSPKPLRM*SAYLTT Trigger: TGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTT...TGGACTTGAAGATGCTGGCCTGTCTTCGTTCTCCCTTCTTGCCCTGGCCCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS CCA 90 bp | TCAGCATACTTGACAACAACAGCCACCAGAAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAGACAGCAGGTGTGTACCCAAAGAAG | + |
Preference number: 5 (lower is better) Translates to: SAYLTTTATRSPPKA*FSTTPQTAGVYPKK Trigger: CTTCTTTGGGTACACACCTGCTGTCTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCTTCTGGTGGCTGTTGTTGTCAAGTATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS-3UTR CAA 90 bp | TGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: CRNSPKKYCKDSRSRGGPEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...GGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | TGGAATAGCAGTACCCCAACCCTGTTCCCAAAGAGGTTAGCCCAAGGCAGAGGAATGTTGTCAGCATACTaGACAACAACAGCCACCAGA | + |
Preference number: 5 (lower is better) Translates to: WNSSTPTLFPKRLAQGRGMLSAY*TTTATR Trigger: TCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACAT...TCCTCTGCCTTGGGCTAACCTCTTTGGGAACAGGGTTGGGGTACTGCTATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | TGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCCACATTACCCCTCTTTaGTGCGAAGAGCAGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: CRNSPKKYCKDSRSRGGPHITPL*CEEQQE Trigger: CTCCTGCTGCTCTTCGCACAAAAGAGGGGTAATGTG...GGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | AGCAGCTACGACCCCTTCACCTTGGTGAGCAACAACAGGCTGATTGCTCTTCAAAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACA | + |
Preference number: 5 (lower is better) Translates to: SSYDPFTLVSNNRLIALQKPLRM*SAYLTT Trigger: TGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTT...TTGAAGAGCAATCAGCCTGTTGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | AACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: NSPKKYCKDSRSRGGPINEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...GTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
||
CDS-3UTR CAA 90 bp | TTCCATATCCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCGAGGGCACCGCAAGCTaGAGTGTGTCCACATATTGG | + |
Preference number: 5 (lower is better) Translates to: FHIPLELWEKINLQPTKAEGTAS*SVSTYW Trigger: CCAATATGTGGACACACTCAAGCTTGCGGTGCCCTC...GGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGATATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | AGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTTACGACCCCTTCACCTaGGTGAGCAACCTGGAAAGT | + |
Preference number: 5 (lower is better) Translates to: RNSPKKYCKDSRSRGGPIYDPFT*VSNLES Trigger: ACTTTCCAGGTTGCTCACCAAGGTGAAGGGGTCGTA...AATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123277.8 |
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CDS-3UTR CAA 90 bp | CGAACACACACACACACACACATCTGGGATACAGTTAAGGAGTTAATAAGCTTTGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: RTHTHTHIWDTVKELISFECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...AAAGCTTATTAACTCCTTAACTGTATCCCAGATGTGTGTGTGTGTGTGTGTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 |
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CDS-3UTR CAA 90 bp | ATTTGCAGAAACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGGAGTGTGTCCACATATaGGACCAGGACAGCCTCATG | + |
Preference number: 5 (lower is better) Translates to: ICRNSPKKYCKDSRSRGGECVHI*DQDSLM Trigger: CATGAGGCTGTCCTGGTCCAATATGTGGACACACTC...CCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGTTTCTGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | CACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAGAGATGTTGTCAGCATACTaGACAACAACAGCCACCAGA | + |
Preference number: 5 (lower is better) Translates to: HLRNTVKIAGVEVGPLTEMLSAY*TTTATR Trigger: TCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACAT...CTCTGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | ACTCACCTAAGAAATACTGTAAAGATAGCAGGAGTAGAGGTGGGCCCATTAACAATGTTGTCAGCATACTaGACAACAACAGCCACCAGA | + |
Preference number: 5 (lower is better) Translates to: THLRNTVKIAGVEVGPLTMLSAY*TTTATR Trigger: TCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACAT...TGTTAATGGGCCCACCTCTACTCCTGCTATCTTTACAGTATTTCTTAGGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 |
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CDS-3UTR CAA 90 bp | TTCCATATCCCTCTAGAATTATGGGAGAAAATAAACCTCCAACCCACAAAAGCCAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACA | + |
Preference number: 5 (lower is better) Translates to: FHIPLELWEKINLQPTKAKPLRM*SAYLTT Trigger: TGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTT...GGCTTTTGTGGGTTGGAGGTTTATTTTCTCCCATAATTCTAGAGGGATATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115660.12 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS-3UTR CAA 90 bp | ATCATTGATCTAATGATAGCACAAACAAATCTCCATCCCAAACTATTGGAAAGCAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACA | + |
Preference number: 5 (lower is better) Translates to: IIDLMIAQTNLHPKLLESKPLRM*SAYLTT Trigger: TGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTT...GCTTTCCAATAGTTTGGGATGGAGATTTGTTTGTGCTATCATTAGATCAATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115660.12 |
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CDS TCA 72 bp | GAGGCCACAACTGCCGCTAAGCCCGCCCCCGGGTTCTaGTCCAGTGGCCGTGGGCCACTCCCACCAGCTTGC | + |
Preference number: 6 (lower is better) Translates to: EATTAAKPAPGF*SSGRGPLPPAC Trigger: GCAAGCTGGTGGGAGTGGCCCACGGCCACTGGATCAGAACCCGGGGGCGGGCTTAGCGGCAGTTGTGGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS GCA 72 bp | GGGCCCAGAGGCCGAGGCCGAGGCTATGGCTTTGACTaGACCTCGGGGAAGGCTGTAGAGGTAGACAGCACC | + |
Preference number: 6 (lower is better) Translates to: GPRGRGRGYGFD*TSGKAVEVDST Trigger: GGTGCTGTCTACCTCTACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGCCTCGGCCTCTGGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS CAA 72 bp | ATGCAGGGCCCAGAGGCCGAGGCCGAGGCTATGGCTTaGACTGCACCTCGGGGAAGGCTGGAAAGTGGCAGC | + |
Preference number: 6 (lower is better) Translates to: MQGPEAEAEAMA*TAPRGRLESGS Trigger: GCTGCCACTTTCCAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGCCTCGGCCTCTGGGCCCTGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000153620.3 |
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CDS TCA 72 bp | CCCCAGACAGCAGGTGTGTACCCAAAGAAGAAGCCTTaGCTGGCCACGGCGGTGCCCTCAGCCCACCAGAGC | + |
Preference number: 6 (lower is better) Translates to: PQTAGVYPKKKP*LATAVPSAHQS Trigger: GCTCTGGTGGGCTGAGGGCACCGCCGTGGCCAGTCAAGGCTTCTTCTTTGGGTACACACCTGCTGTCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 |
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CDS TCA 72 bp | TGCAGGGCCCAGAGGCCGAGGCCGAGGCTATGGCTTTaGCTGCACCTCGGGGAAGGCTGTAGAGGTAGACAG | + |
Preference number: 6 (lower is better) Translates to: CRAQRPRPRLWL*LHLGEGCRGRQ Trigger: CTGTCTACCTCTACAGCCTTCCCCGAGGTGCAGTCAAAGCCATAGCCTCGGCCTCGGCCTCTGGGCCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS GCA 72 bp | ATCCAGTGGCCGTGGGCCACTCCCACCAGCTTGCTGTaGCTGGACAATGGCGACACCAGTGAAGAGCAGCAG | + |
Preference number: 6 (lower is better) Translates to: IQWPWATPTSLL*LDNGDTSEEQQ Trigger: CTGCTGCTCTTCACTGGTGTCGCCATTGTCCAGGCACAGCAAGCTGGTGGGAGTGGCCCACGGCCACTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS TCA 72 bp | ACCAGCACAGCTAAGGATATATACTTGAGGCGCCGGTaGGCCGCTGTAGTGGACCCAGGTTCCAACGCGCCC | + |
Preference number: 6 (lower is better) Translates to: TSTAKDIYLRRR*AAVVDPGSNAP Trigger: GGGCGCGTTGGAACCTGGGTCCACTACAGCGGCTCACCGGCGCCTCAAGTATATATCCTTAGCTGTGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208640.2 |
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CDS TCA 72 bp | CACCTCGGGGAAGGCTGTAGAGGTAGACAGCACCAATaGCGAGCCCAGCGCCCAGGGCAAATAATGGGTCCA | + |
Preference number: 6 (lower is better) Translates to: HLGEGCRGRQHQ*RAQRPGQIMGP Trigger: TGGACCCATTATTTGCCCTGGGCGCTGGGCTCGTCATTGGTGCTGTCTACCTCTACAGCCTTCCCCGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS CCA 72 bp | ACGAGCCCAGCGCCCAGGGCAAATAATGGGTCCAGGTaGAAGCCAAAGAGGCGAATGGAGGCAACAGTGGAC | + |
Preference number: 6 (lower is better) Translates to: TSPAPRANNGSR*KPKRRMEATVD Trigger: GTCCACTGTTGCCTCCATTCGCCTCTTTGGCTTCCACCTGGACCCATTATTTGCCCTGGGCGCTGGGCTCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS GCA 72 bp | TGGACCAGGACAGCCTCATGGAGGAAGAGGACCAGGTaGTTCACATTACCCGCTGTAGTGGACCCAGGTTCC | + |
Preference number: 6 (lower is better) Translates to: WTRTASWRKRTR*FTLPAVVDPGS Trigger: GGAACCTGGGTCCACTACAGCGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208397.2 |
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CDS CAA 90 bp | AGACAGGCCAGCATCTTCAAGTCCAGCAGCTACGACCCCTTCACCTaGGTGAGCAACTTTGGCAGAAAGGGCTCCGTGGTGAGGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: RQASIFKSSSYDPFT*VSNFGRKGSVVRSP Trigger: AGGAGACCTCACCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGATGCTGGCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153620.3 |
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CDS CAA 90 bp | CAGCCCCTCTTTTGTGCGAAGAGCAGCAGGAGACAGGTGAGACCTTaGAGCACTTCAGCCATGACCACAGCAGTGGTGGCAAAGAAGCGG | + |
Preference number: 6 (lower is better) Translates to: QPLFCAKSSRRQVRP*STSAMTTAVVAKKR Trigger: CCGCTTCTTTGCCACCACTGCTGTGGTCATGGCTGAAGTGCTCAAAGGTCTCACCTGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS CCA 72 bp | AGAGAGGGCACCGCAAGCTTGAGTGTGTCCACATATTaGACCAGGACAGCCTCATGGAGGAAGAGGACCAGG | + |
Preference number: 6 (lower is better) Translates to: REGTASLSVSTY*TRTASWRKRTR Trigger: CCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGTGCCCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS CAA 72 bp | GAGAGAGGGCACCGCAAGCTTGAGTGTGTCCACATATaGGACCAGGACAGCCTCATGGAGGAAGAGGACCAG | + |
Preference number: 6 (lower is better) Translates to: ERGHRKLECVHI*DQDSLMEEEDQ Trigger: CTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGTGCCCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS TCA 72 bp | GTTCATTACAGTTCTTTGGCAGAAAGGGCTCCGTGGTaGGGTCTCCTCGAGAAGACAGCTGCGGTGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: VHYSSLAERAPW*GLLEKTAAVVV Trigger: CACCACCACCGCAGCTGTCTTCTCGAGGAGACCTCACCACGGAGCCCTTTCTGCCAAAGAACTGTAATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208718.2 |
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CDS CAA 72 bp | AGCATCTTCAAGTCCAGCAGCTACGACCCCTTCACCTaGGTGAGCAACTTTGGCAGAAAGGGCTCCGTGGTG | + |
Preference number: 6 (lower is better) Translates to: SIFKSSSYDPFT*VSNFGRKGSVV Trigger: CACCACGGAGCCCTTTCTGCCAAAGTTGCTCACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153620.3 |
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CDS CAA 72 bp | GAGAGAGGGCACCGCAAGCTTGAGTGTGTCCACATATaGGACCAGGACAGCCCCTCTTTTGTGCGAAGAGCA | + |
Preference number: 6 (lower is better) Translates to: ERGHRKLECVHI*DQDSPSFVRRA Trigger: TGCTCTTCGCACAAAAGAGGGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGTGCCCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208640.2 |
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CDS CAA 90 bp | TTACCCCTCTTTTGTGCGAAGAGCAGCAGGAGACAGGTGAGACCTTaGAGCACTTCAGCCATGACCACAGCAGTGGTGGCAAAGAAGCGG | + |
Preference number: 6 (lower is better) Translates to: LPLFCAKSSRRQVRP*STSAMTTAVVAKKR Trigger: CCGCTTCTTTGCCACCACTGCTGTGGTCATGGCTGAAGTGCTCAAAGGTCTCACCTGTCTCCTGCTGCTCTTCGCACAAAAGAGGGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 |
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CDS CAA 90 bp | GGTATAGATGAGAGAGGGCACCGCAAGCTTGAGTGTGTCCACATATaGGACCAGGACAGCCTCATGGAGGAAGAGGACCAGGTGCTTCAC | + |
Preference number: 6 (lower is better) Translates to: GIDERGHRKLECVHI*DQDSLMEEEDQVLH Trigger: GTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAAGCTTGCGGTGCCCTCTCTCATCTATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |
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CDS GCA 72 bp | TGGACCAGGACAGCCTCATGGAGGAAGAGGACCAGGTaGTTCACATTACCTTTGAGCACTTCAGCCATGACC | + |
Preference number: 6 (lower is better) Translates to: WTRTASWRKRTR*FTLPLSTSAMT Trigger: GGTCATGGCTGAAGTGCTCAAAGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207114.2 |
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CDS TCA 72 bp | TCGGGGAAGGCTGGAAAGTGGCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGTTATTCTGCAAGGTAT | + |
Preference number: 6 (lower is better) Translates to: SGKAGKWQLAGC*WQHTGGYSARY Trigger: ATACCTTGCAGAATAACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAGCCTTCCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096514.11 ENSMUST00000153620.3 |
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CDS CCA 72 bp | TTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCCCTC | + |
Preference number: 6 (lower is better) Translates to: LSVSTYWTRTAS*RKRTRCFTLPL Trigger: GAGGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000096514.11 ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000123277.8 ENSMUST00000153620.3 ENSMUST00000155967.3 ENSMUST00000208633.2 |
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CDS CCA 72 bp | TTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCCGCT | + |
Preference number: 6 (lower is better) Translates to: LSVSTYWTRTAS*RKRTRCFTLPA Trigger: AGCGGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208397.2 |
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CDS CAA 90 bp | GTGGACAGCACAATAGACAGGGAGGTGGCAAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACAACAGCCACCAGAAGCCCACCAAAG | + |
Preference number: 6 (lower is better) Translates to: VDSTIDREVAKPLRM*SAYLTTTATRSPPK Trigger: CTTTGGTGGGCTTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTTTGCCACCTCCCTGTCTATTGTGCTGTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS CAA 90 bp | GAGGCAACAGTGGACAGCACAATAGACAGGGAGGTGGCAAAGCCCTaGAGGATGTTGTCAGCATACTTGACAACAACAGCCACCAGAAGC | + |
Preference number: 6 (lower is better) Translates to: EATVDSTIDREVAKP*RMLSAYLTTTATRS Trigger: GCTTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTTTGCCACCTCCCTGTCTATTGTGCTGTCCACTGTTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS TCA 72 bp | GGTGAGCAACCTGGAAAGTGGCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGTTATTCTGCAAGGTAT | + |
Preference number: 6 (lower is better) Translates to: GEQPGKWQLAGC*WQHTGGYSARY Trigger: ATACCTTGCAGAATAACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAGGTTGCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123277.8 |
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CDS CCA 72 bp | TTGACAACAACAGCCACCAGAAGCCCACCAAAGGCTTaGTTTAGTACTACACCCCAGACAGCAGGTGTGTAC | + |
Preference number: 6 (lower is better) Translates to: LTTTATRSPPKA*FSTTPQTAGVY Trigger: GTACACACCTGCTGTCTGGGGTGTAGTACTAAACCAAGCCTTTGGTGGGCTTCTGGTGGCTGTTGTTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS CAA 90 bp | ATAGACAGGGAGGTGGCAAAGCCCTTGAGGATGTTGTCAGCATACTaGACAACAACAGCCACCAGAAGCCCACCAAAGGCTTGGTTTAGT | + |
Preference number: 6 (lower is better) Translates to: IDREVAKPLRMLSAY*TTTATRSPPKAWFS Trigger: ACTAAACCAAGCCTTTGGTGGGCTTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTTTGCCACCTCCCTGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS CCA 72 bp | TTGAGTGTGTCCACATATTGGACCAGGACAGCCTCATaGAGGAAGAGGACCAGGTGCTTCACATTACCTTTG | + |
Preference number: 6 (lower is better) Translates to: LSVSTYWTRTAS*RKRTRCFTLPL Trigger: CAAAGGTAATGTGAAGCACCTGGTCCTCTTCCTCCATGAGGCTGTCCTGGTCCAATATGTGGACACACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207114.2 |
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CDS CAA 72 bp | ACAATAGACAGGGAGGTGGCAAAGCCCTTGAGGATGTaGTCAGCATACTTGACAACAACAGCCACCAGAAGC | + |
Preference number: 6 (lower is better) Translates to: TIDREVAKPLRM*SAYLTTTATRS Trigger: GCTTCTGGTGGCTGTTGTTGTCAAGTATGCTGACAACATCCTCAAGGGCTTTGCCACCTCCCTGTCTATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000208397.2 ENSMUST00000208718.2 |
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CDS TCA 72 bp | GATATGTCACCTGGAAAGTGGCAGCTGGCAGGTTGCTaGTGGCAACATACTGGAGGTTATTCTGCAAGGTAT | + |
Preference number: 6 (lower is better) Translates to: DMSPGKWQLAGC*WQHTGGYSARY Trigger: ATACCTTGCAGAATAACCTCCAGTATGTTGCCATCAGCAACCTGCCAGCTGCCACTTTCCAGGTGACATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000115660.12 ENSMUST00000115663.10 ENSMUST00000155967.3 ENSMUST00000207114.2 ENSMUST00000208397.2 ENSMUST00000208633.2 |