Pregenerated sensors for SLC35A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028293Ensembl transcript IDs: ENSMUST00000029970.14, ENSMUST00000126033.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCTAGATCCTCACTGCTATGGGGACAAAGTACTATCCATGGACTaGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: KLDPHCYGDKVLSMD*RRRLAFLSRYLNKR Trigger: TCTCTTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAGTACTTTGTCCCCATAGCAGTGAGGATCTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR GCA 90 bp | AATGGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTaGTTGAATATTATAGTTTCACCTGATGCTCTCTGGTCCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: NGFGTVTLRHGLKPR*LNIIVSPDALWSCI Trigger: GATGCAGGACCAGAGAGCATCAGGTGAAACTATAATATTCAAGCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR CCA 90 bp | GTACATCACACACACACACACACACACACACACACAAAAATACCATaGCACCTCCATGCTCTGTGTACAAGATCTCTCTCTCTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: VHHTHTHTHTHTKIP*HLHALCTRSLSLFL Trigger: GAGAAAGAGAGAGAGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCTCTCCAGGTACCTGAACAAGAGAACAGTGTGTACAGAAATGGCTTTGTCACCTGATGCTCTCTaGTCCTGCATCATTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AFLSRYLNKRTVCTEMALSPDAL*SCIIAS Trigger: GGAGGCAATGATGCAGGACCAGAGAGCATCAGGTGA...CAAAGCCATTTCTGTACACACTGTTCTCTTGTTCAGGTACCTGGAGAGGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR-3UTR GCA 90 bp | TACAGAAATGGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTGCACCATGGCACCTCCATaGTCTGTGTACAAGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: YRNGFGTVTLRHGLKPRCTMAPP*SVYKIS Trigger: AGAGATCTTGTACACAGAGCATGGAGGTGCCATGGT...GCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCCATTTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR-3UTR CCA 90 bp | ACTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGTACAGAAATGGCTTTaGCACTGTAACCCTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: TIHGLEKKASLPLQVPEQVQKWL*HCNPQT Trigger: TGTCTGAGGGTTACAGTGCCAAAGCCATTTCTGTAC...TTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR-3UTR TCA 90 bp | ACTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAACCTACCATCTGGGGTTaGCTTAAGGCTCTAATTTAT | + |
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Preference number: 2 (lower is better) Translates to: TIHGLEKKASLPLQVPEQPTIWG*LKALIY Trigger: ATAAATTAGAGCCTTAAGTCAACCCCAGATGGTAGG...TTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCTCTCCAGGTACCTGAACAAGAGAACAGTGTGTACAGAAATGGCTTTGCACACAAAAATACCATaGCACCTCCATGCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: AFLSRYLNKRTVCTEMALHTKIP*HLHALC Trigger: ACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTG...CAAAGCCATTTCTGTACACACTGTTCTCTTGTTCAGGTACCTGGAGAGGAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR CAA 90 bp | GGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTGCTaGAATATTATAGTTTCACCTGATGCTCTCTGGTCCTGCATCATT | + |
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Preference number: 2 (lower is better) Translates to: GFGTVTLRHGLKPRC*NIIVSPDALWSCII Trigger: AATGATGCAGGACCAGAGAGCATCAGGTGAAACTATAATATTCAAGCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR GCA 72 bp | CACCTGATGCTCTCTGGTCCTGCATCATTGCCTCCGTaGTCTGTGTACATCACACACACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: HLMLSGPASLPP*SVYITHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGATGCAGGACCAGAGAGCATCAGGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR TCA 72 bp | AGAAGTCAGTGTCTGAGCTACGAAGTAGATTCACCCTaGGGTGTGTTCAACTGTCTTACTCCTTCCTCACTC | + |
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Preference number: 3 (lower is better) Translates to: RSQCLSYEVDSP*GVFNCLTPSSL Trigger: GAGTGAGGAAGGAGTAAGACAGTTGAACACACCTCAGGGTGAATCTACTTCGTAGCTCAGACACTGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| 3UTR CCA 72 bp | ACACACACACACACACACACACACACAAAAATACCATaGCACCTCCATGCTCTGTGTACAAGATCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTHTKIP*HLHALCTRSLS Trigger: AGAGAGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | TCATTGCCTCCGTGCTCTGTGTACATCACACACACACACACACACACACACACACTGCATCCAGATTACTaGGAGCCAGGAAGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SLPPCSVYITHTHTHTHTLHPDY*EPGRPC Trigger: ACATGGCCTTCCTGGCTCTCAGTAATCTGGATGCAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR GCA 90 bp | TCATTGCCTCCGTGCTCTGTGTACATCACACACACACACACACACACACACACAGGTCACCTGGTACACTaGTGCATCCAGATTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPPCSVYITHTHTHTHTGHLVH*CIQITE Trigger: CTCAGTAATCTGGATGCAGCAGTGTACCAGGTGACC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | CACACACACACAAAAATACCATGGCACCTCCATGCTCTGTGTACAAGATCTCTCACACACGGCAGTGGTTaGGAAGTAGAGTTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHTKIPWHLHALCTRSLTHGSG*EVEFFS Trigger: GCTGAAGAACTCTACTTCTCAACCACTGCCGTGTGT...GAGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR GCA 90 bp | CTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGAAGGCCATGTTGTTCTaGACAGCATACACTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSMDWRRRLAFLSRYLNKKAMLF*TAYTSD Trigger: ATCACTAGTGTATGCTGTGCAGAACAACATGGCCTT...CTTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CCA 90 bp | CACACACACACAAAAATACCATGGCACCTCCATGCTCTGTGTACAAGATCTCTCACTTCGCCAGTTCCTTaGGGCTCCCCAAGACATTTT | + |
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Preference number: 4 (lower is better) Translates to: HTHTKIPWHLHALCTRSLTSPVP*GSPRHF Trigger: AAAATGTCTTGGGGAGCCCCAAGGAACTGGCGAAGT...GAGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTCTCCAGGTACCTGAACAAGAGAACAGTGTGTACAGAAATGGCTTTGACGACTTTTGTAGCTTaGGCTGGTTTCCACTGTACG | + |
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Preference number: 4 (lower is better) Translates to: AFLSRYLNKRTVCTEMALTTFVA*AGFHCT Trigger: CGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGT...CAAAGCCATTTCTGTACACACTGTTCTCTTGTTCAGGTACCTGGAGAGGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | TACAGAAATGGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTGCACTTTATCACTTCTGTaGTACACACGGCAGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: YRNGFGTVTLRHGLKPRCTLSLL*YTRQWL Trigger: CAACCACTGCCGTGTGTATCACAGAAGTGATAAAGT...GCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCCATTTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | ACAGTAAATGGCACAAATGCATCACTAGAGTTCTCAGTCTTCACCCAGAAGTCACCCCACCACACAGCATaGAGACGGAAATCCACTGTA | + |
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Preference number: 4 (lower is better) Translates to: TVNGTNASLEFSVFTQKSPHHTA*RRKSTV Trigger: TACAGTGGATTTCCGTCTTCATGCTGTGTGGTGGGG...TGACTTCTGGGTGAAGACTGAGAACTCTAGTGATGCATTTGTGCCATTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR GCA 90 bp | ACTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAACCTAACAATGGATTCTaGGCTACCACGACTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TIHGLEKKASLPLQVPEQPNNGF*ATTTFV Trigger: TACAAAAGTCGTGGTAGCGCAGAATCCATTGTTAGG...TTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CCA 90 bp | TACAGAAATGGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTGCTTTTGTAGCTTGGGCTaGTTTCCACTGTACGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: YRNGFGTVTLRHGLKPRCFCSLG*FPLYEC Trigger: ACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAA...GCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCCATTTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | ACAGTAAATGGCACAAATGCATCACTAGAGTTCTCAGTCTTCACCCAGAAGTCACCTGACAGATACATCTaGATGTTTCTCACCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TVNGTNASLEFSVFTQKSPDRYI*MFLTQR Trigger: CCTTTGGGTGAGAAACATTCAGATGTATCTGTCAGG...TGACTTCTGGGTGAAGACTGAGAACTCTAGTGATGCATTTGTGCCATTTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR TCA 90 bp | TACAGAAATGGCTTTGGCACTGTAACCCTCAGACACGGTCTTAAACCTCGTTGCGAAGTTGCTTCTTGTTaGATGGATGTAGTATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YRNGFGTVTLRHGLKPRCEVASC*MDVVSC Trigger: ACAAGATACTACATCCATTCAACAAGAAGCAACTTC...GCAACGAGGTTTAAGACCGTGTCTGAGGGTTACAGTGCCAAAGCCATTTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR GCA 90 bp | TCATTGCCTCCGTGCTCTGTGTACATCACACACACACACACACACACACACACATTCAAAATAAACTCCTaGAAATCCAGAGCACAATAC | + |
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Preference number: 4 (lower is better) Translates to: SLPPCSVYITHTHTHTHTFKINS*KSRAQY Trigger: GTATTGTGCTCTGGATTTGCAGGAGTTTATTTTGAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CCA 90 bp | GGGCATACTGCCAGGGACTGTAGGCACGACTTTTGTAGCTTGGGCTaGTTTCCACTGTACGAGTGTGACCCCACCACACAGCATGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GHTARDCRHDFCSLG*FPLYECDPTTQHED Trigger: GTCTTCATGCTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGCAGTATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS CCA 90 bp | ACAGTGGGCATACTGCCAGGGACTGTAGGCACGACTTTTGTAGCTTaGGCTGGTTTCCACTGTACGAGTGTGACCCCACCACACAGCATG | + |
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Preference number: 5 (lower is better) Translates to: TVGILPGTVGTTFVA*AGFHCTSVTPPHSM Trigger: CATGCTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGCAGTATGCCCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS CCA 90 bp | CCAAAGCCTAACAATGGATTCTGCGCTACCACGACTTTTGTAGCTTaGGCTGGTTTCCACTGTACGAGTGTGACCCCACCACACAGCATG | + |
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Preference number: 5 (lower is better) Translates to: PKPNNGFCATTTFVA*AGFHCTSVTPPHSM Trigger: CATGCTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGGTAGCGCAGAATCCATTGTTAGGCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | CTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGGCCAGGAAGGCCATGTaGTTCTGCACAGCATACACT | + |
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Preference number: 5 (lower is better) Translates to: LSMDWRRRLAFLSRYLNKARKAM*FCTAYT Trigger: AGTGTATGCTGTGCAGAACAACATGGCCTTCCTGGC...CTTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | CTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGGCAGGGGATCTTCAGTaGATAGGTCACCTGGTACAC | + |
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Preference number: 5 (lower is better) Translates to: LSMDWRRRLAFLSRYLNKAGDLQ*IGHLVH Trigger: GTGTACCAGGTGACCTATCAACTGAAGATCCCCTGC...CTTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | CTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAAGTACACACGGCAGTGGTaGAGAAGTAGAGTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSMDWRRRLAFLSRYLNKYTRQW*RSRVLQ Trigger: CTGAAGAACTCTACTTCTCAACCACTGCCGTGTGTA...CTTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | TCATTGCCTCCGTGCTCTGTGTACATCACACACACACACACACACACACACACACACGACTTTTGTAGCTaGGGCTGGTTTCCACTGTAC | + |
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Preference number: 5 (lower is better) Translates to: SLPPCSVYITHTHTHTHTHDFCS*GWFPLY Trigger: GTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS TCA 90 bp | TCTTCAGTTGATAGGTCACCTGGTACACTGCTGCATCCAGATTACTaGGAGCCAGGAAGGCCATGTTGTTCTGCACAGCATACACTAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSVDRSPGTLLHPDY*EPGRPCCSAQHTLV Trigger: CACTAGTGTATGCTGTGCAGAACAACATGGCCTTCCTGGCTCTCAGTAATCTGGATGCAGCAGTGTACCAGGTGACCTATCAACTGAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS-3UTR CAA 90 bp | ACTATCCATGGACTGGAGAAGAAGGCTAGCCTTCCTCTCCAGGTACCTGAACAACTTCAGCTGTTGTCCTaGTGTATCTTAAAGCTACGG | + |
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Preference number: 5 (lower is better) Translates to: TIHGLEKKASLPLQVPEQLQLLS*CILKLR Trigger: CCGTAGCTTTAAGATACACAAGGACAACAGCTGAAG...TTGTTCAGGTACCTGGAGAGGAAGGCTAGCCTTCTTCTCCAGTCCATGGATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | ACACACACACACAAAAATACCATGGCACCTCCATGCTCTGTGTACAAGATCTCTAACTTCGCCAGTTCCTaGGGGCTCCCCAAGACATTT | + |
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Preference number: 5 (lower is better) Translates to: THTHKNTMAPPCSVYKISNFASS*GLPKTF Trigger: AAATGTCTTGGGGAGCCCCAAGGAACTGGCGAAGTT...AGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | TCATTGCCTCCGTGCTCTGTGTACATCACACACACACACACACACACACACACAAGAGTTCTTCAGCTGTaGTCCTTGTGTATCTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPPCSVYITHTHTHTHTRVLQL*SLCILK Trigger: CTTTAAGATACACAAGGACAACAGCTGAAGAACTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTACACAGAGCACGGAGGCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | GCCTTCCTCTCCAGGTACCTGAACAAGAGAACAGTGTGTACAGAAATGGCTTTGGAAATCCACTGTAATTaGCTGAGTGTTCGATTTAAC | + |
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Preference number: 5 (lower is better) Translates to: AFLSRYLNKRTVCTEMALEIHCN*LSVRFN Trigger: GTTAAATCGAACACTCAGCAAATTACAGTGGATTTC...CAAAGCCATTTCTGTACACACTGTTCTCTTGTTCAGGTACCTGGAGAGGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS-3UTR CAA 90 bp | ACACACACACACAAAAATACCATGGCACCTCCATGCTCTGTGTACAAGATCTCTGTCAAGCAGTACAGCTaGAAGAATAAACTGACATTT | + |
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Preference number: 5 (lower is better) Translates to: THTHKNTMAPPCSVYKISVKQYS*KNKLTF Trigger: AAATGTCAGTTTATTCTTCAAGCTGTACTGCTTGAC...AGAGATCTTGTACACAGAGCATGGAGGTGCCATGGTATTTTTGTGTGTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CCA 72 bp | GCCAGGGACTGTAGGCACGACTTTTGTAGCTTGGGCTaGTTTCCACTGTACGAGTGTGACCCCACCACACAG | + |
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Preference number: 6 (lower is better) Translates to: ARDCRHDFCSLG*FPLYECDPTTQ Trigger: CTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS CAA 90 bp | GACAGTGGGCATACTGCCAGGGACTGTAGGCACGACTTTTGTAGCTaGGGCTGGTTTCCACTGTACGAGTGTGACCCCACCACACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: DSGHTARDCRHDFCS*GWFPLYECDPTTQH Trigger: ATGCTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGCAGTATGCCCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS CAA 72 bp | CATACTGCCAGGGACTGTAGGCACGACTTTTGTAGCTaGGGCTGGTTTCCACTGTACGAGTGTGACCCCACC | + |
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Preference number: 6 (lower is better) Translates to: HTARDCRHDFCS*GWFPLYECDPT Trigger: GGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGCAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS CCA 72 bp | TGGATTCTGCGCTACCACGACTTTTGTAGCTTGGGCTaGTTTCCACTGTACGAGTGTGACCCCACCACACAG | + |
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Preference number: 6 (lower is better) Translates to: WILRYHDFCSLG*FPLYECDPTTQ Trigger: CTGTGTGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGGTAGCGCAGAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CCA 72 bp | ATACTGCCAGGGACTGTAGGCACGACTTTTGTAGCTTaGGCTGGTTTCCACTGTACGAGTGTGACCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: ILPGTVGTTFVA*AGFHCTSVTPP Trigger: TGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGCCTACAGTCCCTGGCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126033.2 |
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| CDS GCA 72 bp | GCAGGGGATCTTCAGTTGATAGGTCACCTGGTACACTaGTGCATCCAGATTACTGAGAGCCAGGAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AGDLQLIGHLVH*CIQITESQEGH Trigger: ATGGCCTTCCTGGCTCTCAGTAATCTGGATGCAGCAGTGTACCAGGTGACCTATCAACTGAAGATCCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS TCA 72 bp | GATAGGTCACCTGGTACACTGCTGCATCCAGATTACTaGGAGCCAGGAAGGCCATGTTGTTCTGCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: DRSPGTLLHPDY*EPGRPCCSAQH Trigger: ATGCTGTGCAGAACAACATGGCCTTCCTGGCTCTCAGTAATCTGGATGCAGCAGTGTACCAGGTGACCTATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS CCA 72 bp | AACAATGGATTCTGCGCTACCACGACTTTTGTAGCTTaGGCTGGTTTCCACTGTACGAGTGTGACCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: NNGFCATTTFVA*AGFHCTSVTPP Trigger: TGGTGGGGTCACACTCGTACAGTGGAAACCAGCCCAAGCTACAAAAGTCGTGGTAGCGCAGAATCCATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CAA 72 bp | GCAGCCACCAGAGTCATCACCGTCAAGCAGTACAGCTaGAAGAATAAACTGACATTTTCTCTCGCCGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: AATRVITVKQYS*KNKLTFSLAGA Trigger: GGCTCCGGCGAGAGAAAATGTCAGTTTATTCTTCAAGCTGTACTGCTTGACGGTGATGACTCTGGTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CAA 90 bp | TACACACGGCAGTGGTTGAGAAGTAGAGTTCTTCAGCTGTTGTCCTaGTGTATCTTAAAGCTACGGTGTAAGCGGCAGCCACCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: YTRQWLRSRVLQLLS*CILKLRCKRQPPES Trigger: TGACTCTGGTGGCTGCCGCTTACACCGTAGCTTTAAGATACACAAGGACAACAGCTGAAGAACTCTACTTCTCAACCACTGCCGTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS TCA 72 bp | CCAGCTAACGTCACAACGATCCCTGACAGATACATCTaGATGTTTCTCACCCAAAGGGAAGTGTCGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: PANVTTIPDRYI*MFLTQREVSEL Trigger: GAGTTCCGACACTTCCCTTTGGGTGAGAAACATTCAGATGTATCTGTCAGGGATCGTTGTGACGTTAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS GCA 72 bp | TCCAGATTACTGAGAGCCAGGAAGGCCATGTTGTTCTaGACAGCATACACTAGTGATGGCACACTCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SRLLRARKAMLF*TAYTSDGTLNF Trigger: GAAGTTGAGTGTGCCATCACTAGTGTATGCTGTGCAGAACAACATGGCCTTCCTGGCTCTCAGTAATCTGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS CCA 72 bp | ACACTAGTGATGGCACACTCAACTTCGCCAGTTCCTTaGGGCTCCCCAAGACATTTTCACTTAATGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLVMAHSTSPVP*GSPRHFHLMRL Trigger: AAGCCTCATTAAGTGAAAATGTCTTGGGGAGCCCCAAGGAACTGGCGAAGTTGAGTGTGCCATCACTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS CAA 72 bp | CAGTGGTTGAGAAGTAGAGTTCTTCAGCTGTTGTCCTaGTGTATCTTAAAGCTACGGTGTAAGCGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QWLRSRVLQLLS*CILKLRCKRQP Trigger: TGGCTGCCGCTTACACCGTAGCTTTAAGATACACAAGGACAACAGCTGAAGAACTCTACTTCTCAACCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS CAA 72 bp | ACACGGCAGTGGTTGAGAAGTAGAGTTCTTCAGCTGTaGTCCTTGTGTATCTTAAAGCTACGGTGTAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TRQWLRSRVLQL*SLCILKLRCKR Trigger: CCGCTTACACCGTAGCTTTAAGATACACAAGGACAACAGCTGAAGAACTCTACTTCTCAACCACTGCCGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029970.14 |
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| CDS TCA 72 bp | ACAGGCCAACACTTATCAGTAACTTTATCACTTCTGTaGTACACACGGCAGTGGTTGAGAAGTAGAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TGQHLSVTLSLL*YTRQWLRSRVL Trigger: AAGAACTCTACTTCTCAACCACTGCCGTGTGTATCACAGAAGTGATAAAGTTACTGATAAGTGTTGGCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS CAA 90 bp | AGTGTGACCCCACCACACAGCATGAAGACGGAAATCCACTGTAATTaGCTGAGTGTTCGATTTAACATTAAAACAGTACATAAAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SVTPPHSMKTEIHCN*LSVRFNIKTVHKAV Trigger: CACTGCTTTATGTACTGTTTTAATGTTAAATCGAACACTCAGCAAATTACAGTGGATTTCCGTCTTCATGCTGTGTGGTGGGGTCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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| CDS CAA 72 bp | CCACCACACAGCATGAAGACGGAAATCCACTGTAATTaGCTGAGTGTTCGATTTAACATTAAAACAGTACAT | + |
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Preference number: 6 (lower is better) Translates to: PPHSMKTEIHCN*LSVRFNIKTVH Trigger: ATGTACTGTTTTAATGTTAAATCGAACACTCAGCAAATTACAGTGGATTTCCGTCTTCATGCTGTGTGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029970.14 ENSMUST00000126033.2 |
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