RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC34A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021490

Ensembl transcript IDs: ENSMUST00000057167.9, ENSMUST00000224925.2, ENSMUST00000225259.2

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGTGCTCACCGGGCCAGACCGGCACACCTTTCTGCAGACGGGTCTaGGCGTGGCAGGCCGCCGCTGCTGCGTTATCCGTGACTACCTGC +
Preference number: 1 (lower is better)
Translates to: VCSPGQTGTPFCRRV*AWQAAAAALSVTTC
Trigger: GCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAGAAAGGTGTGCCGGTCTGGCCCGGTGAGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 90 bp CGGCACACCTTTCTGCAGACGGGTCTGAGCGTGGCAGGCCGCCGCTaGTGCGTTATCCGTGACTACCTGCTGGCCGAGGGTGACGGCGTA +
Preference number: 1 (lower is better)
Translates to: RHTFLQTGLSVAGRR*CVIRDYLLAEGDGV
Trigger: TACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAGAAAGGTGTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 90 bp CACACCTTTCTGCAGACGGGTCTGAGCGTGGCAGGCCGCCGCTGCTaGGTTATCCGTGACTACCTGCTGGCCGAGGGTGACGGCGTACTG +
Preference number: 1 (lower is better)
Translates to: HTFLQTGLSVAGRRC*VIRDYLLAEGDGVL
Trigger: CAGTACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAGAAAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 90 bp ACGGGCGTGCAATCTGTGTGGGCCACACGCCACGGGCGCTCCTGGTaGTCATGGGCAGACGAGGCGTGCATGGAGGCATCCTCAATAAGA +
Preference number: 1 (lower is better)
Translates to: TGVQSVWATRHGRSW*SWADEACMEASSIR
Trigger: TCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACACAGATTGCACGCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 90 bp TCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTaGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: SVQCCGISGSMTWLS*ATRTIAVCGHHGLG
Trigger: CCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 90 bp GTGCAATCTGTGTGGGCCACACGCCACGGGCGCTCCTGGTGCTCATaGGCAGACGAGGCGTGCATGGAGGCATCCTCAATAAGACAGTGC +
Preference number: 1 (lower is better)
Translates to: VQSVWATRHGRSWCS*ADEACMEASSIRQC
Trigger: GCACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACACAGATTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 90 bp CTGGAAGGGCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATaGCGTGGCTATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGC +
Preference number: 1 (lower is better)
Translates to: LEGLHQCSAAGSADR*RGYRGPLGQSLCVG
Trigger: GCCCACACACAGCGATTGTCCGAGTGGCCCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGCCCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 90 bp GGTCCTCCAGGCCTCCTGGGCCCTGTTCCCTACTCCTGTGGTAGATaGCATATAGAGGCCTTTGGTCCTGGCACCTTCCCAGGGTTCCAG +
Preference number: 1 (lower is better)
Translates to: GPPGLLGPVPYSCGR*HIEAFGPGTFPGFQ
Trigger: CTGGAACCCTGGGAAGGTGCCAGGACCAAAGGCCTCTATATGGCATCTACCACAGGAGTAGGGAACAGGGCCCAGGAGGCCTGGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 90 bp AGGGCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTaGCTATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCAC +
Preference number: 1 (lower is better)
Translates to: RATSVQCCGISGSMT*LSWATRTIAVCGHH
Trigger: GTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 90 bp GACGAGGCGTGCATGGAGGCATCCTCAATAAGACAGTGCACGATCTaGTTGGTGGGCTGCGTGAGCAGTGCTCTTAGTAGGACAGCTAGA +
Preference number: 1 (lower is better)
Translates to: DEACMEASSIRQCTI*LVGCVSSALSRTAR
Trigger: TCTAGCTGTCCTACTAAGAGCACTGCTCACGCAGCCCACCAATCAGATCGTGCACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 90 bp GCCTTTGGTCCTGGCACCTTCCCAGGGTTCCAGAGACCCCACACCTaGTTAGGAATATTGGGGTGGCAAATTCTCAAACTCTACCTCAGG +
Preference number: 1 (lower is better)
Translates to: AFGPGTFPGFQRPHT*LGILGWQILKLYLR
Trigger: CCTGAGGTAGAGTTTGAGAATTTGCCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTGGAACCCTGGGAAGGTGCCAGGACCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp GCTGTGTGTGGGCATCACGGCCTGGGGGTCTGCTGGCTGCCATCTCCCCGCAGGACAGGTACCCAAGGGTaGCACAAAAGCATGTACCTC +
Preference number: 2 (lower is better)
Translates to: AVCGHHGLGVCWLPSPRRTGTQG*HKSMYL
Trigger: GAGGTACATGCTTTTGTGCCACCCTTGGGTACCTGT...CCTGCGGGGAGATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCACACACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR GCA 90 bp GCCGAGGGTGACGGCGTACTGGATGCGCGCACCAAGGGGCTAGACGGGCGTGCAGCACACACACACACATaGTCTGTCTTTCTACTGTGG +
Preference number: 2 (lower is better)
Translates to: AEGDGVLDARTKGLDGRAAHTHT*SVFLLW
Trigger: CCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGC...TGCACGCCCGTCTAGCCCCTTGGTGCGCGCATCCAGTACGCCGTCACCCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp GAGATGAGTGACTGGAAGGGCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGTGGGCATCACGGCCTaGGGGTCTGCTGGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: EMSDWKGYISAVLRDQRIVGITA*GSAGCH
Trigger: ATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCAC...GATCCGCTGATCCCGCAGCACTGCACTGATGTAGCCCTTCCAGTCACTCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR TCA 90 bp TATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTCAGAGACCCCACACCTaGTTAGGAATATTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: YRGPLGQSLCVGITAWGSQRPHT*LGILGW
Trigger: CCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTG...AGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp TGCGCGCACCAAGGGGCTAGACGGGCGTGCAATCTGTGTGGGCCACACGCCACGGTATGCTTGGAGATTTaGCTCCATGATACCTCAGAA +
Preference number: 2 (lower is better)
Translates to: CAHQGARRACNLCGPHATVCLEI*LHDTSE
Trigger: TTCTGAGGTATCATGGAGCCAAATCTCCAAGCATAC...CGTGGCGTGTGGCCCACACAGATTGCACGCCCGTCTAGCCCCTTGGTGCGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp GCTTGCCTCAGGAGTTGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGTAGGCTCCGTGACTACCTGCTaGCCGAGGGTGACGGCGTAC +
Preference number: 2 (lower is better)
Translates to: ACLRSCQISRVGVTGFVGSVTTC*PRVTAY
Trigger: GTACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGA...GCCTACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR TCA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGAGCATGTACCTCAAGTaGCACGCATCTACACATGTG +
Preference number: 2 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWSMYLK*HASTHV
Trigger: CACATGTGTAGATGCGTGTCACTTGAGGTACATGCT...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR TCA 90 bp GCTTGCCTCAGGAGTTGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGTAGGCGACCAGAATAAACCGTaGACTGGGTGCTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: ACLRSCQISRVGVTGFVGDQNKP*TGCSER
Trigger: CCTCTCAGAGCACCCAGTTCACGGTTTATTCTGGTC...GCCTACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR GCA 90 bp CCCGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTGTGGCCCTTAATATaGACAGGTACCCAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: PALMVTQAQYLACICAHYLWPLI*TGTQGW
Trigger: CCACCCTTGGGTACCTGTGCATATTAAGGGCCACAG...GTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR-3UTR TCA 90 bp CTGGTGCTCATGGGCAGACGAGGCGTGCATGGAGGCATCCTCAATAAGACAGTGATGAGAGGGTATAGCTaGCTCTTTCCAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LVLMGRRGVHGGILNKTVMRGYS*LFPEKF
Trigger: AAACTTTTCTGGAAAGAGTCAGCTATACCCTCTCAT...CACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR TCA 90 bp CCCGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACAGCATGTACCTCAAGTaGCACGCATCTACACATGTG +
Preference number: 2 (lower is better)
Translates to: PALMVTQAQYLACICAHYSMYLK*HASTHV
Trigger: CACATGTGTAGATGCGTGTCACTTGAGGTACATGCT...GTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp GGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGACTTTCCAGAAAAGTTTaGAGACTCCCTAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: GPCIQKASCSSVPPVGTRLSRKV*RLPRHL
Trigger: CAGATGCCTAGGGAGTCTCCAAACTTTTCTGGAAAG...TCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR-3UTR GCA 90 bp TCTACCTCAGGCTTCAGCAATCTTTCTCACAGAACTTTCCACACAAGTAGGCTTCTGTGGCCCTTAATATaGACAGGTACCCAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: STSGFSNLSHRTFHTSRLLWPLI*TGTQGW
Trigger: CCACCCTTGGGTACCTGTGCATATTAAGGGCCACAG...AAGCCTACTTGTGTGGAAAGTTCTGTGAGAAAGATTGCTGAAGCCTGAGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTCTTTCCAGAAAAGTTTaGAGACTCCCTAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVLSRKV*RLPRHL
Trigger: CAGATGCCTAGGGAGTCTCCAAACTTTTCTGGAAAG...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR-3UTR CCA 90 bp TCAGGCTTCAGCAATCTTTCTCACAGAACTTTCCACACAAGTAGGCTTCACAGTTTCTGTCCCTCCTGTTaGTACAAGAGTTGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: SGFSNLSHRTFHTSRLHSFCPSC*YKSCEK
Trigger: CTTCTCACAACTCTTGTACCAACAGGAGGGACAGAA...ACTGTGAAGCCTACTTGTGTGGAAAGTTCTGTGAGAAAGATTGCTGAAGCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR GCA 90 bp CATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGCCTAGCATGTATTTGTaGACACTACCTCTTAATTAC +
Preference number: 2 (lower is better)
Translates to: HVYRRPAVLLSLLLVQELPSMYL*TLPLNY
Trigger: GTAATTAAGAGGTAGTGTGCACAAATACATGCTAGG...CAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR TCA 72 bp CCGGGCCAGACCGGCACACCTTTCTGCAGACGGGTCTaGGCGTGGCAGGCCGCCGCTGCTGCGTTATCCGTG +
Preference number: 3 (lower is better)
Translates to: PGQTGTPFCRRV*AWQAAAAALSV
Trigger: CACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAGAAAGGTGTGCCGGTCTGGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp CTGTGTGTGGGCATCACGGCCTGGGGGTCTGCTGGCTaGCATCTCCCCGCAGGAGGTGGGTGTGCTCACCGG +
Preference number: 3 (lower is better)
Translates to: LCVGITAWGSAG*HLPAGGGCAHR
Trigger: CCGGTGAGCACACCCACCTCCTGCGGGGAGATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCACACACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp CGTACTGGATGCGCGCACCAAGGGGCTAGACGGGCGTaGAATCTGTGTGGGCCACACGCCACGGGCGCTCCT +
Preference number: 3 (lower is better)
Translates to: RTGCAHQGARRA*NLCGPHATGAP
Trigger: AGGAGCGCCCGTGGCGTGTGGCCCACACAGATTGCACGCCCGTCTAGCCCCTTGGTGCGCGCATCCAGTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp TGGCAGGCCGCCGCTGCTGCGTTATCCGTGACTACCTaGTGGCCGAGGGTGACGGCGTACTGGATGCGCGCA +
Preference number: 3 (lower is better)
Translates to: WQAAAAALSVTT*WPRVTAYWMRA
Trigger: TGCGCGCATCCAGTACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp CTGCAGACGGGTCTGAGCGTGGCAGGCCGCCGCTGCTaGGTTATCCGTGACTACCTGCTGGCCGAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: LQTGLSVAGRRC*VIRDYLLAEGD
Trigger: GTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp CAGGCCGCCGCTGCTGCGTTATCCGTGACTACCTGCTaGCCGAGGGTGACGGCGTACTGGATGCGCGCACCA +
Preference number: 3 (lower is better)
Translates to: QAAAAALSVTTC*PRVTAYWMRAP
Trigger: TGGTGCGCGCATCCAGTACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp CAATCTGTGTGGGCCACACGCCACGGGCGCTCCTGGTaGTCATGGGCAGACGAGGCGTGCATGGAGGCATCC +
Preference number: 3 (lower is better)
Translates to: QSVWATRHGRSW*SWADEACMEAS
Trigger: GGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACACAGATTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp GTGCAATCTGTGTGGGCCACACGCCACGGGCGCTCCTaGTGCTCATGGGCAGACGAGGCGTGCATGGAGGCA +
Preference number: 3 (lower is better)
Translates to: VQSVWATRHGRS*CSWADEACMEA
Trigger: TGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACACAGATTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp CCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTaGGGGTCTGCTGGCTGCCATCTCCCCGCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: PLGQSLCVGITA*GSAGCHLPAGG
Trigger: ACCTCCTGCGGGGAGATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp TTTCTGCAGACGGGTCTGAGCGTGGCAGGCCGCCGCTaGTGCGTTATCCGTGACTACCTGCTGGCCGAGGGT +
Preference number: 3 (lower is better)
Translates to: FLQTGLSVAGRR*CVIRDYLLAEG
Trigger: ACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGCGGCGGCCTGCCACGCTCAGACCCGTCTGCAGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp GTGTGGGCCACACGCCACGGGCGCTCCTGGTGCTCATaGGCAGACGAGGCGTGCATGGAGGCATCCTCAATA +
Preference number: 3 (lower is better)
Translates to: VWATRHGRSWCS*ADEACMEASSI
Trigger: TATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp CACGGGCGCTCCTGGTGCTCATGGGCAGACGAGGCGTaGATGGAGGCATCCTCAATAAGACAGTGCACGATC +
Preference number: 3 (lower is better)
Translates to: HGRSWCSWADEA*MEASSIRQCTI
Trigger: GATCGTGCACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 72 bp CTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATaGCGTGGCTATCGTGGGCCACTCGGACAATCGCTG +
Preference number: 3 (lower is better)
Translates to: LHQCSAAGSADR*RGYRGPLGQSL
Trigger: CAGCGATTGTCCGAGTGGCCCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp GGCCTCCTGGGCCCTGTTCCCTACTCCTGTGGTAGATaGCATATAGAGGCCTTTGGTCCTGGCACCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GLLGPVPYSCGR*HIEAFGPGTFP
Trigger: TGGGAAGGTGCCAGGACCAAAGGCCTCTATATGGCATCTACCACAGGAGTAGGGAACAGGGCCCAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp TCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTaGCTATCGTGGGCCACTCGGACAATCGCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SVQCCGISGSMT*LSWATRTIAVC
Trigger: ACACACAGCGATTGTCCGAGTGGCCCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 72 bp TGCAAGCACAAGTTGCTGGGACTGACTGAGCGGAGATaGGTGACTGGAAGGGCTACATCAGTGCAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: CKHKLLGLTERR*VTGRATSVQCC
Trigger: GCAGCACTGCACTGATGTAGCCCTTCCAGTCACTCATCTCCGCTCAGTCAGTCCCAGCAACTTGTGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 72 bp CCTGGCACCTTCCCAGGGTTCCAGAGACCCCACACCTaGTTAGGAATATTGGGGTGGCAAATTCTCAAACTC +
Preference number: 3 (lower is better)
Translates to: PGTFPGFQRPHT*LGILGWQILKL
Trigger: GAGTTTGAGAATTTGCCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTGGAACCCTGGGAAGGTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR TCA 72 bp TGCATGGAGGCATCCTCAATAAGACAGTGCACGATCTaGTTGGTGGGCTGCGTGAGCAGTGCTCTTAGTAGG +
Preference number: 3 (lower is better)
Translates to: CMEASSIRQCTI*LVGCVSSALSR
Trigger: CCTACTAAGAGCACTGCTCACGCAGCCCACCAATCAGATCGTGCACTGTCTTATTGAGGATGCCTCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp GATGCTGGGAACGGAACTCAGGCTCTGTGTAATGAATaGTCTTTCTTAACGCTGAGCCACCTTTCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: DAGNGTQALCNE*SFLTLSHLSSL
Trigger: GAGGCTGGAAAGGTGGCTCAGCGTTAAGAAAGAGCATTCATTACACAGAGCCTGAGTTCCGTTCCCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR-3UTR CAA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGTGTATTTGTGAGGAGTaGCAAACAAGAAAACTAGCT +
Preference number: 3 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWCICEE*QTRKLA
Trigger: AGCTAGTTTTCTTGTTTGCAACTCCTCACAAATACA...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR GCA 72 bp TGTGGGATTCAGACTAAAGGCGAGTGTCCCTCTGTATaGTTGGAGATTTGGCTCCATGATACCTCAGAATAC +
Preference number: 3 (lower is better)
Translates to: CGIQTKGECPSV*LEIWLHDTSEY
Trigger: GTATTCTGAGGTATCATGGAGCCAAATCTCCAAGCATACAGAGGGACACTCGCCTTTAGTCTGAATCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
3UTR CCA 72 bp TATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTaGTACAAGAGTTGTGAGAAGATGAGAGGGTATAGC +
Preference number: 3 (lower is better)
Translates to: YTEGQLFFCPSC*YKSCEKMRGYS
Trigger: GCTATACCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR TCA 72 bp TCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATaGGAGGGTATAGCTGACTCTTTCCAGAAAAGTTTG +
Preference number: 3 (lower is better)
Translates to: SVPPVGTRVVRR*EGIADSFQKSL
Trigger: CAAACTTTTCTGGAAAGAGTCAGCTATACCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR TCA 72 bp GTGTTTGCAAAGAATCAACCTGCATCCCCTGGTGTGTaGCCTCCAGGTGATTTAGATACCCAATATAAAAGC +
Preference number: 3 (lower is better)
Translates to: VFAKNQPASPGV*PPGDLDTQYKS
Trigger: GCTTTTATATTGGGTATCTAAATCACCTGGAGGTCACACACCAGGGGATGCAGGTTGATTCTTTGCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GCCGAGGGTGACGGCGTACTGGATGCGCGCACCAAGGGGCTAGACGGGCGTGCAAGGCCATCCAGGGGCTaGAAAGAGTGCATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: AEGDGVLDARTKGLDGRARPSRG*KECIQR
Trigger: TCGCTGGATGCACTCTTTGCAGCCCCTGGATGGCCT...TGCACGCCCGTCTAGCCCCTTGGTGCGCGCATCCAGTACGCCGTCACCCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GGGTGTGCTCACCGGGCCAGACCGGCACACCTTTCTGCAGACGGGTCTGAGCGTCAAACCAGCGGTACTTaGCGGTGCGTTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCAHRARPAHLSADGSERQTSGT*RCVCPG
Trigger: CCCTGGGCAAACGCACCGCCAAGTACCGCTGGTTTG...ACGCTCAGACCCGTCTGCAGAAAGGTGTGCCGGTCTGGCCCGGTGAGCACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp TATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTTGTTGGAGCCCAGGGTaGGAGGGTAGGCCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: YRGPLGQSLCVGITAWGSCWSPG*EGRPAQ
Trigger: TTGAGCGGGCCTACCCTCTCACCCTGGGCTCCAACA...AGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCCGAGGGTGACGGCGTACTGGATGCGCGCACCAAGGGGCTAGACGGGCGTGCACCTGTGCAGGACTTGTaGGCTGGGCACATAAGCAAA +
Preference number: 4 (lower is better)
Translates to: AEGDGVLDARTKGLDGRAPVQDL*AGHISK
Trigger: TTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGG...TGCACGCCCGTCTAGCCCCTTGGTGCGCGCATCCAGTACGCCGTCACCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp ACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTGCTGGCTGCCATCTCCCGCTTCTGGGACAGCCTaGGCTCTGGCTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TIAVCGHHGLGVCWLPSPASGTA*ALAFAP
Trigger: AGGAGCAAAAGCCAGAGCCCAGGCTGTCCCAGAAGC...GGGAGATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCACACACAGCGATTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGGGTGTAGGTAGCCCGTaGCAGCCTCCAGGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWGVGSP*QPPGAV
Trigger: TACTGCCCCTGGAGGCTGCCACGGGCTACCTACACC...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TGCGCGCACCAAGGGGCTAGACGGGCGTGCAATCTGTGTGGGCCACACGCCACGAACACGGAGCTGCTCTaGACAACAAAGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: CAHQGARRACNLCGPHATNTELL*TTKVML
Trigger: CAGCATGACCTTTGTTGTCCAGAGCAGCTCCGTGTT...CGTGGCGTGTGGCCCACACAGATTGCACGCCCGTCTAGCCCCTTGGTGCGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp ATCTGTGTGGGCCACACGCCACGGGCGCTCCTGGTGCTCATGGGCAGACGAGGCCAATCTGAAATGAGCTaGATAGCTTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ICVGHTPRALLVLMGRRGQSEMS*IASPWG
Trigger: GCCCCAGGGAGAAGCTATCCAGCTCATTTCAGATTG...GCCTCGTCTGCCCATGAGCACCAGGAGCGCCCGTGGCGTGTGGCCCACACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CTGGTGCTCATGGGCAGACGAGGCGTGCATGGAGGCATCCTCAATAAGACAGTGACCTGGGCAAGCTTCTaGGACAGCCTGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LVLMGRRGVHGGILNKTVTWASF*DSLGSG
Trigger: GCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGT...CACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGGTTCCAGGAATCCTGTaGAGGACTTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWVPGIL*RTCGLG
Trigger: GCCCAGCCCACAAGTCCTGCACAGGATTCCTGGAAC...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTGCAGGACTTGTGGGCTaGGCACATAAGCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: YRGPLGQSLCVGITAWGSAGLVG*AHKQRL
Trigger: CAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGC...AGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGCCTGCCAGCCTGCCATaGAAATGCCAAACACCAGCG +
Preference number: 4 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWPASLP*KCQTPA
Trigger: CGCTGGTGTTTGGCATTTCCATGGCAGGCTGGCAGG...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTAGCCCGCCAGCAGAATaGGCCCCACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVSPPAE*APRPGR
Trigger: CCGACCTGGCCGTGGGGCTCATTCTGCTGGCGGGCT...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GTAGGCTTCACAGTGAACAACGGAGTGTCTCTCAGCATCTCCCTCCCCAGCACATGGATAGCTTCTCCCTaGGGCTGGCAAGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGFTVNNGVSLSISLPSTWIASP*GWQALP
Trigger: TGGCAGCGCTTGCCAGCCCCAGGGAGAAGCTATCCA...TGTGCTGGGGAGGGAGATGCTGAGAGACACTCCGTTGTTCACTGTGAAGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GGCAGAAGTAAGGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGGTCCTGTCCCCTGCCTaGATCAGGGCCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: GRSKAHVYRRPAVLLSLLVLSPA*IRATMV
Trigger: CACCATTGTGGCCCTGATGCAGGCAGGGGACAGGAC...CAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCCTTACTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CTGGTGCTCATGGGCAGACGAGGCGTGCATGGAGGCATCCTCAATAAGACAGTGAGCCTGCCATGGAAATaGCAAACACCAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVLMGRRGVHGGILNKTVSLPWK*QTPARA
Trigger: TGCCCTCGCTGGTGTTTGGCATTTCCATGGCAGGCT...CACTGTCTTATTGAGGATGCCTCCATGCACGCCTCGTCTGCCCATGAGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCTGCTGCGTTATCCGTGACTACCTGCTGGCCGAGGGTGACGGCGTACTGGATGGTGTTGATGACCTTCTaGATGACATTGGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: AAALSVTTCWPRVTAYWMVLMTF*MTLATW
Trigger: CCAAGTGGCCAATGTCATCCAGAAGGTCATCAACAC...CATCCAGTACGCCGTCACCCTCGGCCAGCAGGTAGTCACGGATAACGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GTGCATGGAGGCATCCTCAATAAGACAGTGCACGATCTGATTGGTGGGCTGCGTATGTCTGCAGCCACTTaGGGAGGTGCCCGGGACTTC +
Preference number: 4 (lower is better)
Translates to: VHGGILNKTVHDLIGGLRMSAAT*GGARDF
Trigger: GAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACAT...ACGCAGCCCACCAATCAGATCGTGCACTGTCTTATTGAGGATGCCTCCATGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp TGTGCACACTACCTCTTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGAGCCCGCCAGCAGAATaGGCCCCACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: CAHYLLITKAHATVALNMSPPAE*APRPGR
Trigger: CCGACCTGGCCGTGGGGCTCATTCTGCTGGCGGGCT...CATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAAGAGGTAGTGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTCCACGAAGATATGGTTaGATTTCTCCATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: YRGPLGQSLCVGITAWGSPRRYG*ISPWWC
Trigger: ACACCACCATGGAGAAATGCAACCATATCTTCGTGG...AGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GAGATGAGTGACTGGAAGGGCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGGCTCAGACTGGAGATaGCATAGGTGGATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EMSDWKGYISAVLRDQRIGSDWR*HRWMFQ
Trigger: CTGGAACATCCACCTATGCCATCTCCAGTCTGAGCC...GATCCGCTGATCCCGCAGCACTGCACTGATGTAGCCCTTCCAGTCACTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGACTTGGCGGTGCGTTTaGCCAGGGCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: HVYRRPAVLLSLLLVQELTWRCV*PGPWPC
Trigger: GCATGGCCAAGGCCCTGGGCAAACGCACCGCCAAGT...CAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCACTTGGCGGTGCGTTTaGCCAGGGCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLTWRCV*PGPWPC
Trigger: GCATGGCCAAGGCCCTGGGCAAACGCACCGCCAAGT...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCAGTAGTCCCACGGACTGGAAGTaGGGAGACAGCCGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLSTVGIVKIPLLVPGSSPTDWK*GDSRSP
Trigger: GGGGGACCGGCTGTCTCCCCACTTCCAGTCCGTGGG...ACTACTGCCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGCTTCTGGGACAGCCTaGGCTCTGGCTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPCIQKASCSSVPPVGTRASGTA*ALAFAP
Trigger: AGGAGCAAAAGCCAGAGCCCAGGCTGTCCCAGAAGC...TCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCACCTGGGCAAGCTTCTaGGACAGCCTGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLTWASF*DSLGSG
Trigger: GCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGT...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGGTGTAGGTAGCCCGTaGCAGCCTCCAGGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVGVGSP*QPPGAV
Trigger: TACTGCCCCTGGAGGCTGCCACGGGCTACCTACACC...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGTGTTGGAGCCCAGGGTaGGAGGGTAGGCCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRCWSPG*EGRPAQ
Trigger: TTGAGCGGGCCTACCCTCTCACCCTGGGCTCCAACA...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCGTCCTGTCCCCTGCCTaGATCAGGGCCACAATGGTG +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLVLSPA*IRATMV
Trigger: CACCATTGTGGCCCTGATGCAGGCAGGGGACAGGAC...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp AAGGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAAGGAAGTCCCATGTCTaGAGCCACTTGGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KAHVYRRPAVLLSLLLVQRKSHV*SHLGRC
Trigger: GCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCT...TTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACCCACGGACTGGAAGTaGGGAGACAGCCGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPPTDWK*GDSRSP
Trigger: GGGGGACCGGCTGTCTCCCCACTTCCAGTCCGTGGG...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGGTGTCTCCCACGGACTaGAAGTGGGGAGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRVSPTD*KWGDSR
Trigger: CCGGCTGTCTCCCCACTTCCAGTCCGTGGGAGACAC...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGGGACAGCCTGGGCTCTaGCTTTTGCTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGGQPGL*LLLLFL
Trigger: CAGGAAGAGGAGCAAAAGCCAGAGCCCAGGCTGTCC...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp ATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAATGTCTGCAGCCACTTaGGGAGGTGCCCGGGACTTC +
Preference number: 4 (lower is better)
Translates to: IQKASCSSVPPVGTRVVRMSAAT*GGARDF
Trigger: GAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACAT...TCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGGGATGGCATTGTCCTTaGAGATGTCCCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGGWHCP*RCPQPP
Trigger: AGGTGGCTGGGGACATCTTCAAGGACAATGCCATCC...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp GCTTGCCTCAGGAGTTGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGTAGGCATCCGAATGAGACTGTaGTTCCTCAGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: ACLRSCQISRVGVTGFVGIRMRL*FLRDSS
Trigger: GGATGAGTCCCTGAGGAATCACAGTCTCATTCGGAT...GCCTACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp AGGGTTCCAGAGACCCCACACCTGATTAGGAATATTGGGGTGGCAAATTCTCAAGTCAGTCCTGTCCCCTaGCTGCATCAGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: RVPETPHLIRNIGVANSQVSPVP*LHQGHN
Trigger: ATTGTGGCCCTGATGCAGGCAGGGGACAGGACTGAC...TTGAGAATTTGCCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTGGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TCTACCTCAGGCTTCAGCAATCTTTCTCACAGAACTTTCCACACAAGTAGGCTTAGCGGTACTTGGCGGTaGGTTTGCCCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: STSGFSNLSHRTFHTSRLSGTWR*VCPGPW
Trigger: CCAAGGCCCTGGGCAAACGCACCGCCAAGTACCGCT...AAGCCTACTTGTGTGGAAAGTTCTGTGAGAAAGATTGCTGAAGCCTGAGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAATGACATTGGCCACTTaGCCCTTGAGCAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GPCIQKASCSSVPPVGTRMTLAT*PLSREL
Trigger: CAACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCAT...TCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGACAACAAAGGTCATGCTaGCACCCACCACCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GPCIQKASCSSVPPVGTRQQRSC*HPPPWQ
Trigger: TTGCCATGGTGGTGGGTGCCAGCATGACCTTTGTTG...TCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCCTGCCAGCCTGCCATaGAAATGCCAAACACCAGCG +
Preference number: 4 (lower is better)
Translates to: RTNGHTGSVPSMYLCTLPPASLP*KCQTPA
Trigger: CGCTGGTGTTTGGCATTTCCATGGCAGGCTGGCAGG...AGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp AAGGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAACCACAATGGTGTTGGTaGCAGAGGTTCCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: KAHVYRRPAVLLSLLLVQPQWCW*QRFRCW
Trigger: CCAACATCGGAACCTCTGTCACCAACACCATTGTGG...TTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCCCACGGCAATGCTGGTaGTCACAGACTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLPRQCW*SQTCPA
Trigger: AGCTGGACAAGTCTGTGATCACCAGCATTGCCGTGG...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGGTTCCAGGAATCCTGTaGAGGACTTGTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRVPGIL*RTCGLG
Trigger: GCCCAGCCCACAAGTCCTGCACAGGATTCCTGGAAC...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGGAGGTACTGGAACTCTaGACCAGAACTGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGEVLEL*TRTVTR
Trigger: CCTGGTGACAGTTCTGGTGCAGAGTTCCAGTACCTC...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGCACAGGTACCCAAGGGTCAGTCCTGTCCCCTaGCTGCATCAGGGCCACAAT +
Preference number: 4 (lower is better)
Translates to: LITKAHATVALNMHRYPRVSPVP*LHQGHN
Trigger: ATTGTGGCCCTGATGCAGGCAGGGGACAGGACTGAC...CCTTGGGTACCTGTGCATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTCTCCATGGTGGTGTTTaGAAGGCTGCCGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCLHGGV*KAADGL
Trigger: GAGGCCATCGGCAGCCTTGCAAACACCACCATGGAG...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGGGACAACAAAGGTCATaGTGGCACCCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: HVYRRPAVLLSLLLVQELGQQRS*WHPPPW
Trigger: CCATGGTGGTGGGTGCCAGCATGACCTTTGTTGTCC...CAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGCATAGCCTGCCAGCCTaGCATGGAAATGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGHSLPA*HGNAKH
Trigger: GTGTTTGGCATTTCCATGGCAGGCTGGCAGGCTATG...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGCACAGGTACCCAAGGAGGAAGTCCCATGTCTaGAGCCACTTGGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LITKAHATVALNMHRYPRRKSHV*SHLGRC
Trigger: GCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCT...CCTTGGGTACCTGTGCATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp ATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGGGGCTGCAAAGAGTaGATCCAGCGAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: IQKASCSSVPPVGTRVVRRGCKE*IQRGRK
Trigger: CTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCT...TCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTAGGCCATCCAGGGGCTaGAAAGAGTGCATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCRPSRG*KECIQR
Trigger: TCGCTGGATGCACTCTTTGCAGCCCCTGGATGGCCT...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCAGTAGTTGGATAGCTTCTCCCTaGGGCTGGCAAGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CLSTVGIVKIPLLVPGSSWIASP*GWQALP
Trigger: TGGCAGCGCTTGCCAGCCCCAGGGAGAAGCTATCCA...ACTACTGCCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CCCGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACTTTTGCTCCTCTTCCTaGGCCAGCTTGGTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PALMVTQAQYLACICAHYFCSSS*ASLVGS
Trigger: ACTACCTACCAAGCTGGCTCAGGAAGAGGAGCAAAA...GTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCCACGGCAATGCTGGTaGTCACAGACTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRPRQCW*SQTCPA
Trigger: AGCTGGACAAGTCTGTGATCACCAGCATTGCCGTGG...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp AAGGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAATCCGAATGAGACTGTaGTTCCTCAGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: KAHVYRRPAVLLSLLLVQIRMRL*FLRDSS
Trigger: GGATGAGTCCCTGAGGAATCACAGTCTCATTCGGAT...TTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGCACAGGTACCCAAGGGGACAACAAAGGTCATaGTGGCACCCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: LITKAHATVALNMHRYPRGQQRS*WHPPPW
Trigger: CCATGGTGGTGGGTGCCAGCATGACCTTTGTTGTCC...CCTTGGGTACCTGTGCATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCATAGCCTGCCAGCCTaGCATGGAAATGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: RTNGHTGSVPSMYLCTLPHSLPA*HGNAKH
Trigger: GTGTTTGGCATTTCCATGGCAGGCTGGCAGGCTATG...AGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GTGGCACAAAAGCATGTACCTCAAGTGACACGCATCTACACATGTGTGCACACAGGCTCAGACTGGAGATaGCATAGGTGGATGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VAQKHVPQVTRIYTCVHTGSDWR*HRWMFQ
Trigger: CTGGAACATCCACCTATGCCATCTCCAGTCTGAGCC...TGTGTGCACACATGTGTAGATGCGTGTCACTTGAGGTACATGCTTTTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTCAACAAAGGTCATGCTaGCACCCACCACCATGGCAA +
Preference number: 4 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVQQRSC*HPPPWQ
Trigger: TTGCCATGGTGGTGGGTGCCAGCATGACCTTTGTTG...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp TGTGCACACTACCTCTTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGGGATGGCATTGTCCTTaGAGATGTCCCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: CAHYLLITKAHATVALNMGWHCP*RCPQPP
Trigger: AGGTGGCTGGGGACATCTTCAAGGACAATGCCATCC...CATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAAGAGGTAGTGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAAAGCGGTACTTGGCGGTaGGTTTGCCCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FFYAQLAELAEVRPMYTESGTWR*VCPGPW
Trigger: CCAAGGCCCTGGGCAAACGCACCGCCAAGTACCGCT...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GTGGCACAAAAGCATGTACCTCAAGTGACACGCATCTACACATGTGTGCACACATGCATTTCTCCATGGTaGTGTTTGCAAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VAQKHVPQVTRIYTCVHTCISPW*CLQGCR
Trigger: TCGGCAGCCTTGCAAACACCACCATGGAGAAATGCA...TGTGTGCACACATGTGTAGATGCGTGTCACTTGAGGTACATGCTTTTGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCAACACGGAGCTGCTCTaGACAACAAAGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLNTELL*TTKVML
Trigger: CAGCATGACCTTTGTTGTCCAGAGCAGCTCCGTGTT...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR CAA 72 bp TCATGTGTGTGTTTGTGTGTGAGCTTGCCTCAGGAGTaGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SCVCLCVSLPQE*SDLSSGSYRLC
Trigger: ACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGCTCACACACAAACACACACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR TCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGTTTTGCTCCTCTTCCTaGGCCAGCTTGGTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRFCSSS*ASLVGS
Trigger: ACTACCTACCAAGCTGGCTCAGGAAGAGGAGCAAAA...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCAAGCCTGCCATGGAAATaGCAAACACCAGCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPSLPWK*QTPARA
Trigger: TGCCCTCGCTGGTGTTTGGCATTTCCATGGCAGGCT...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCAGCCTCTGTTGTGTCTaGGTGACACCAAATCCGAAT +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLSLCCV*VTPNPN
Trigger: ATTCGGATTTGGTGTCACCCAGACACAACAGAGGCT...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp AGGGTTCCAGAGACCCCACACCTGATTAGGAATATTGGGGTGGCAAATTCTCAAAGCCTCTGTTGTGTCTaGGTGACACCAAATCCGAAT +
Preference number: 4 (lower is better)
Translates to: RVPETPHLIRNIGVANSQSLCCV*VTPNPN
Trigger: ATTCGGATTTGGTGTCACCCAGACACAACAGAGGCT...TTGAGAATTTGCCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTGGAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTTGCATTTCTCCATGGTaGTGTTTGCAAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCCISPW*CLQGCR
Trigger: TCGGCAGCCTTGCAAACACCACCATGGAGAAATGCA...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TCTACCTCAGGCTTCAGCAATCTTTCTCACAGAACTTTCCACACAAGTAGGCTTATGACATTGGCCACTTaGCCCTTGAGCAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: STSGFSNLSHRTFHTSRLMTLAT*PLSREL
Trigger: CAACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCAT...AAGCCTACTTGTGTGGAAAGTTCTGTGAGAAAGATTGCTGAAGCCTGAGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAACAAACCAGCGGTACTTaGCGGTGCGTTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FFYAQLAELAEVRPMYTEQTSGT*RCVCPG
Trigger: CCCTGGGCAAACGCACCGCCAAGTACCGCTGGTTTG...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCCCACGAAGATATGGTTaGATTTCTCCATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALMVTQAQYLACICAHYLPRRYG*ISPWWC
Trigger: ACACCACCATGGAGAAATGCAACCATATCTTCGTGG...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CTAGCATGTATTTGTGCACACTACCTCTTAATTACAAAAGCCCATGCCACTGTGGCAGGACTTGTGGGCTaGGCACATAAGCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LACICAHYLLITKAHATVAGLVG*AHKQRL
Trigger: CAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGC...CACAGTGGCATGGGCTTTTGTAATTAAGAGGTAGTGTGCACAAATACATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAAGGACAGCCTGGGCTCTaGCTTTTGCTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FFYAQLAELAEVRPMYTEGQPGL*LLLLFL
Trigger: CAGGAAGAGGAGCAAAAGCCAGAGCCCAGGCTGTCC...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTACAGACTTGTCCAGCTaGATGATGAGTCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVTDLSS*MMSLVK
Trigger: CTTCACAAGACTCATCATCCAGCTGGACAAGTCTGT...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGTGTTGATGACCTTCTaGATGACATTGGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCVLMTF*MTLATW
Trigger: CCAAGTGGCCAATGTCATCCAGAAGGTCATCAACAC...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCAGTAGTCAATCTGAAATGAGCTaGATAGCTTCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLSTVGIVKIPLLVPGSSQSEMS*IASPWG
Trigger: GCCCCAGGGAGAAGCTATCCAGCTCATTTCAGATTG...ACTACTGCCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TGTGCACACTACCTCTTAATTACAAAAGCCCATGCCACTGTGGCCCTTAATATGCACATAAGCAAAGGTTaGCCCATGCACCATGTGTCT +
Preference number: 4 (lower is better)
Translates to: CAHYLLITKAHATVALNMHISKG*PMHHVS
Trigger: AGACACATGGTGCATGGGGCAACCTTTGCTTATGTG...CATATTAAGGGCCACAGTGGCATGGGCTTTTGTAATTAAGAGGTAGTGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp CCTCCAGGTGATTTAGATACCCAATATAAAAGCCATGTAAAGAATTATTGTGCCCTCCATGGTGGTGTTTaGAAGGCTGCCGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPGDLDTQYKSHVKNYCALHGGV*KAADGL
Trigger: GAGGCCATCGGCAGCCTTGCAAACACCACCATGGAG...GGCACAATAATTCTTTACATGGCTTTTATATTGGGTATCTAAATCACCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAAAGGGGCTGCAAAGAGTaGATCCAGCGAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: FFYAQLAELAEVRPMYTERGCKE*IQRGRK
Trigger: CTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCT...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGACAGACTTGTCCAGCTaGATGATGAGTCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRTDLSS*MMSLVK
Trigger: CTTCACAAGACTCATCATCCAGCTGGACAAGTCTGT...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR GCA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACACATAAGCAAAGGTTaGCCCATGCACCATGTGTCT +
Preference number: 4 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPHISKG*PMHHVS
Trigger: AGACACATGGTGCATGGGGCAACCTTTGCTTATGTG...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CCA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAACCTGTGCAGGACTTGTaGGCTGGGCACATAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FFYAQLAELAEVRPMYTEPVQDL*AGHISK
Trigger: TTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGG...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
3UTR CAA 72 bp TGCTCTGAGAGGTATCCTCTGTGTATTTGTGAGGAGTaGCAAACAAGAAAACTAGCTTATGGGGAGATTCTT +
Preference number: 4 (lower is better)
Translates to: CSERYPLCICEE*QTRKLAYGEIL
Trigger: AAGAATCTCCCCATAAGCTAGTTTTCTTGTTTGCAACTCCTCACAAATACACAGAGGATACCTCTCAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCTGTGTGTGGGCATCACGGCCTGGGGGTCTGCTGGCTGCCATCTCCCCGCAGGTACTTGGCGGTGCGTTaGCCCAGGGCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: AVCGHHGLGVCWLPSPRRYLAVR*PRALAM
Trigger: CATGGCCAAGGCCCTGGGCAAACGCACCGCCAAGTA...CCTGCGGGGAGATGGCAGCCAGCAGACCCCCAGGCCGTGATGCCCACACACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGCGCGCACCAAGGGGCTAGACGGGCGTGCAATCTGTGTGGGCCACACGCCACGGGCTCTGTGATGACTTaGAGAAGGTCGGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: CAHQGARRACNLCGPHATGSVMT*RRSGAS
Trigger: TGATGCCCCCGACCTTCTCAAAGTCATCACAGAGCC...CGTGGCGTGTGGCCCACACAGATTGCACGCCCGTCTAGCCCCTTGGTGCGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS GCA 90 bp AAGGCCAGTAGAGCCCCAAAGGGCGTGCCCACTCCGACCATAGCCTaGCAGCCTGCCATGGAAATGCCAAACACCAGCGAGGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: KASRAPKGVPTPTIA*QPAMEMPNTSEGKS
Trigger: GCTCTTGCCCTCGCTGGTGTTTGGCATTTCCATGGCAGGCTGGCAGGCTATGGTCGGAGTGGGCACGCCCTTTGGGGCTCTACTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 90 bp AGGGGCTGCAAAGAGTGCATCCAGCGAGGTAGGAAGTCCCATGTCTaGAGCCACTTGGGGAGGTGCCCGGGACTTCGGCTCTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: RGCKECIQRGRKSHV*SHLGRCPGLRLCRT
Trigger: TGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCGATGACGTGGCTATCGTGGCATGTCTGCAGCCACTaGGGGAGGTGCCCGGGACTT +
Preference number: 5 (lower is better)
Translates to: ATSVQCCGISGSMTWLSWHVCSH*GRCPGL
Trigger: AAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATG...CCACGATAGCCACGTCATCGATCCGCTGATCCCGCAGCACTGCACTGATGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS CCA 90 bp ATGAGCCCCACGGCCAGGTCGGGCAGCCCCGTATCCACGAAGATATaGTTGCATTTCTCCATGGTGGTGTTTGCAAGGCTGCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: MSPTARSGSPVSTKI*LHFSMVVFARLPMA
Trigger: GGCCATCGGCAGCCTTGCAAACACCACCATGGAGAAATGCAACCATATCTTCGTGGATACGGGGCTGCCCGACCTGGCCGTGGGGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS GCA 90 bp TCCCATGTCTGCAGCCACTTGGGGAGGTGCCCGGGACTTCGGCTCTaGAGGACATTAACAAGCACCACAAAGGCCAGTAGAGCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SHVCSHLGRCPGLRL*RTLTSTTKASRAPK
Trigger: CTTTGGGGCTCTACTGGCCTTTGTGGTGCTTGTTAATGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CCA 90 bp AGGAAAGCCAGCATCAGAGGCACCTTCAGGAGCTTCGTGCCAACCTaGGCAAGCTTCTGGGACAGCCTGGGCTCTGGCTTTTGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RKASIRGTFRSFVPT*ASFWDSLGSGFCSS
Trigger: AGAGGAGCAAAAGCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGTTGGCACGAAGCTCCTGAAGGTGCCTCTGATGCTGGCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 90 bp AGGAATCCTGTGCAGGACTTGTGGGCTGGGCACATAAGCAAAGGTTaGCCCATGCACCATGTGTCTCCCACGGACTGGAAGTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RNPVQDLWAGHISKG*PMHHVSPTDWKWGD
Trigger: GTCTCCCCACTTCCAGTCCGTGGGAGACACATGGTGCATGGGGCAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 90 bp ATCCAGCGAGGTAGGAAGTCCCATGTCTGCAGCCACTTGGGGAGGTaGCCGGGACTTCGGCTCTGCAGGACATTAACAAGCACCACAAAG +
Preference number: 5 (lower is better)
Translates to: IQRGRKSHVCSHLGR*PGLRLCRTLTSTTK
Trigger: CTTTGTGGTGCTTGTTAATGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCTACCTCGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 90 bp CACAAGGTGGCTCTTGTGATAAGGCCATCCAGGGGCTGCAAAGAGTaGATCCAGCGAGGTAGGAAGTCCCATGTCTGCAGCCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: HKVALVIRPSRGCKE*IQRGRKSHVCSHLG
Trigger: CCCCAAGTGGCTGCAGACATGGGACTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCTGGATGGCCTTATCACAAGAGCCACCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 90 bp AGAGGTAAAGGAAAGCCAGCATCAGAGGCACCTTCAGGAGCTTCGTaGCAACCTGGGCAAGCTTCTGGGACAGCCTGGGCTCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RGKGKPASEAPSGAS*QPGQASGTAWALAF
Trigger: AAAAGCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGTTGGCACGAAGCTCCTGAAGGTGCCTCTGATGCTGGCTTTCCTTTACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TATCGTGGGCCACTCGGACAATCGCTGTGTGTGGGCATCACGGCCTGGGGGTCTTTGGATAGGATGGCATaGTCCTTGAAGATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YRGPLGQSLCVGITAWGSLDRMA*SLKMSP
Trigger: TGGGGACATCTTCAAGGACAATGCCATCCTATCCAA...AGACCCCCAGGCCGTGATGCCCACACACAGCGATTGTCCGAGTGGCCCACGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGTACTTGGCGGTGCGTTaGCCCAGGGCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGYLAVR*PRALAM
Trigger: CATGGCCAAGGCCCTGGGCAAACGCACCGCCAAGTA...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCTTGCCTCAGGAGTTGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGTAGGCACCTTCTGGATGACATaGGCCACTTGGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: ACLRSCQISRVGVTGFVGTFWMT*ATWPLS
Trigger: GCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGT...GCCTACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGCAAACCAGCGGTACTaGGCGGTGCGTTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVANQRY*AVRLPR
Trigger: CCTGGGCAAACGCACCGCCAAGTACCGCTGGTTTGC...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGGCAAACCAGCGGTACTaGGCGGTGCGTTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HVYRRPAVLLSLLLVQELANQRY*AVRLPR
Trigger: CCTGGGCAAACGCACCGCCAAGTACCGCTGGTTTGC...CAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTCCTGGGCTCTGGCTTTaGCTCCTCTTCCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVPGLWL*LLFLSQ
Trigger: CTGGCTCAGGAAGAGGAGCAAAAGCCAGAGCCCAGG...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGAGCCCTGCCACTGGGTaGGATAGGATGGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGSPATG*DRMALS
Trigger: GGACAATGCCATCCTATCCAACCCAGTGGCAGGGCT...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCCGCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACTCTCCATGGTGGTGTTaGCAAGGCTGCCGATGGCCT +
Preference number: 5 (lower is better)
Translates to: PALMVTQAQYLACICAHYSPWWC*QGCRWP
Trigger: AGGCCATCGGCAGCCTTGCAAACACCACCATGGAGA...GTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GAGATGAGTGACTGGAAGGGCTACATCAGTGCAGTGCTGCGGGATCAGCGGATCTCCACGAAGATATGGTaGCATTTCTCCATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EMSDWKGYISAVLRDQRISTKIW*HFSMVV
Trigger: CACCACCATGGAGAAATGCAACCATATCTTCGTGGA...GATCCGCTGATCCCGCAGCACTGCACTGATGTAGCCCTTCCAGTCACTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS CCA 90 bp GATGGCCTCTACCCTGGACATAGAAGTGGAAGCCTCTGTTGTGTCTaGGTGACACCAAATCCGAATGAGACTGTGATTCCTCAGGGACTC +
Preference number: 5 (lower is better)
Translates to: DGLYPGHRSGSLCCV*VTPNPNETVIPQGL
Trigger: GAGTCCCTGAGGAATCACAGTCTCATTCGGATTTGGTGTCACCCAGACACAACAGAGGCTTCCACTTCTATGTCCAGGGTAGAGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTTTGGCCACTTGGCCCTaGAGCAGGGAGTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVLATWP*SRELSI
Trigger: GATGCTCAACTCCCTGCTCAAGGGCCAAGTGGCCAA...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCAGTAGTCATGTCTGCAGCCACTaGGGGAGGTGCCCGGGACTT +
Preference number: 5 (lower is better)
Translates to: CLSTVGIVKIPLLVPGSSHVCSH*GRCPGL
Trigger: AAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATG...ACTACTGCCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGTAGGCCAAAAGAGGTGATGCTGGGAACGGAACTCAGGCTCTGTGTAATGAATAATCCTGTGCAGGACTaGTGGGCTGGGCACATAAGC +
Preference number: 5 (lower is better)
Translates to: CRPKEVMLGTELRLCVMNNPVQD*WAGHIS
Trigger: GCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATT...ATTCATTACACAGAGCCTGAGTTCCGTTCCCAGCATCACCTCTTTTGGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp ATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAGGCTCTGTGATGACTTaGAGAAGGTCGGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: IQKASCSSVPPVGTRVVRGSVMT*RRSGAS
Trigger: TGATGCCCCCGACCTTCTCAAAGTCATCACAGAGCC...TCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTTCTCCATGGTGGTGTTaGCAAGGCTGCCGATGGCCT +
Preference number: 5 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCSPWWC*QGCRWP
Trigger: AGGCCATCGGCAGCCTTGCAAACACCACCATGGAGA...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCGATGACATTGGCCACTaGGCCCTTGAGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: ALMVTQAQYLACICAHYLDDIGH*ALEQGV
Trigger: AACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATC...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGTAGGCCAAAAGAGGTGATGCTGGGAACGGAACTCAGGCTCTGTGTAATGAATGATGACATTGGCCACTaGGCCCTTGAGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: CRPKEVMLGTELRLCVMNDDIGH*ALEQGV
Trigger: AACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATC...ATTCATTACACAGAGCCTGAGTTCCGTTCCCAGCATCACCTCTTTTGGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGACCTTCTGGATGACATaGGCCACTTGGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HVYRRPAVLLSLLLVQELTFWMT*ATWPLS
Trigger: GCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGT...CAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCTTGCCTCAGGAGTTGTCAGATCTCTCGAGTGGGAGTTACAGGCTTTGTAGGCGCAGGAAAGTCTGTGTaGATGACCTTCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: ACLRSCQISRVGVTGFVGAGKSV*MTFWMT
Trigger: TGTCATCCAGAAGGTCATCAACACAGACTTTCCTGC...GCCTACAAAGCCTGTAACTCCCACTCGAGAGATCTGACAACTCCTGAGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp ATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTAGGATGGCATTGTCCTaGAAGATGTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: MYTEGQLFFCPSCWYKSCRMALS*KMSPAT
Trigger: GGTGGCTGGGGACATCTTCAAGGACAATGCCATCCT...ACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GGCCCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGATCCACGAAGATATGGTaGCATTTCTCCATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GPCIQKASCSSVPPVGTRSTKIW*HFSMVV
Trigger: CACCACCATGGAGAAATGCAACCATATCTTCGTGGA...TCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp AGGGTTCCAGAGACCCCACACCTGATTAGGAATATTGGGGTGGCAAATTCTCAAAGGATGCCCGAGATGTaGAAGAAGAAGTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RVPETPHLIRNIGVANSQRMPEM*KKKWQR
Trigger: CCTCTGCCACTTCTTCTTCAACATCTCGGGCATCCT...TTGAGAATTTGCCACCCCAATATTCCTAATCAGGTGTGGGGTCTCTGGAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGTGAGAAGATGAGAGGGTTGGATAGGATGGCATaGTCCTTGAAGATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QLFFCPSCWYKSCEKMRGLDRMA*SLKMSP
Trigger: TGGGGACATCTTCAAGGACAATGCCATCCTATCCAA...CCCTCTCATCTTCTCACAACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCAAGCCCTGCCACTGGGTaGGATAGGATGGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPSPATG*DRMALS
Trigger: GGACAATGCCATCCTATCCAACCCAGTGGCAGGGCT...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp GCACTAATGGTCACACAGGCTCAGTACCTAGCATGTATTTGTGCACACTACCTCAAGTGGAAGCCTCTGTaGTGTCTGGGTGACACCAAA +
Preference number: 5 (lower is better)
Translates to: ALMVTQAQYLACICAHYLKWKPL*CLGDTK
Trigger: TTTGGTGTCACCCAGACACAACAGAGGCTTCCACTT...GAGGTAGTGTGCACAAATACATGCTAGGTACTGAGCCTGTGTGACCATTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGAGGATGCCCGAGATGTaGAAGAAGAAGTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HALSFYCGHCKNTTPRSRRMPEM*KKKWQR
Trigger: CCTCTGCCACTTCTTCTTCAACATCTCGGGCATCCT...CCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCAAATCCTGTGCAGGACTaGTGGGCTGGGCACATAAGC +
Preference number: 5 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPNPVQD*WAGHIS
Trigger: GCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATT...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAACCTGGGCTCTGGCTTTaGCTCCTCTTCCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: FFYAQLAELAEVRPMYTEPGLWL*LLFLSQ
Trigger: CTGGCTCAGGAAGAGGAGCAAAAGCCAGAGCCCAGG...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGTCTTTCTACTGTGGGCATTGTAAAAATACCACTCCTCGTTCCAGGCAGTAGTACAGAGGTTCCGATGTaGGAGCCCATGATGATCGGA +
Preference number: 5 (lower is better)
Translates to: CLSTVGIVKIPLLVPGSSTEVPM*EPMMIG
Trigger: TCCGATCATCATGGGCTCCAACATCGGAACCTCTGT...ACTACTGCCTGGAACGAGGAGTGGTATTTTTACAATGCCCACAGTAGAAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCATGTATACAGAAGGCCAGCTGTTCTTCTGTCCCTCCTGTTGGTACAAGAGTTGCAGGAAAGTCTGTGTaGATGACCTTCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: PCIQKASCSSVPPVGTRVAGKSV*MTFWMT
Trigger: TGTCATCCAGAAGGTCATCAACACAGACTTTCCTGC...AACTCTTGTACCAACAGGAGGGACAGAAGAACAGCTGGCCTTCTGTATACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TTTTTCTATGCACAGTTAGCAGAATTGGCAGAAGTAAGGCCCATGTATACAGAATTGGCCACTTGGCCCTaGAGCAGGGAGTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: FFYAQLAELAEVRPMYTELATWP*SRELSI
Trigger: GATGCTCAACTCCCTGCTCAAGGGCCAAGTGGCCAA...TTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCATAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp TGCACACACACACACATGCTCTGTCTTTCTACTGTGGGCATTGTAAAAATACCAAAGTGGAAGCCTCTGTaGTGTCTGGGTGACACCAAA +
Preference number: 5 (lower is better)
Translates to: CTHTHMLCLSTVGIVKIPKWKPL*CLGDTK
Trigger: TTTGGTGTCACCCAGACACAACAGAGGCTTCCACTT...TGGTATTTTTACAATGCCCACAGTAGAAAGACAGAGCATGTGTGTGTGTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS-3UTR CAA 90 bp CCTCCAGGTGATTTAGATACCCAATATAAAAGCCATGTAAAGAATTATTGTGCCACAGAGGTTCCGATGTaGGAGCCCATGATGATCGGA +
Preference number: 5 (lower is better)
Translates to: PPGDLDTQYKSHVKNYCATEVPM*EPMMIG
Trigger: TCCGATCATCATGGGCTCCAACATCGGAACCTCTGT...GGCACAATAATTCTTTACATGGCTTTTATATTGGGTATCTAAATCACCTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225259.2
CDS GCA 72 bp AGAGCCCCAAAGGGCGTGCCCACTCCGACCATAGCCTaGCAGCCTGCCATGGAAATGCCAAACACCAGCGAG +
Preference number: 6 (lower is better)
Translates to: RAPKGVPTPTIA*QPAMEMPNTSE
Trigger: CTCGCTGGTGTTTGGCATTTCCATGGCAGGCTGGCAGGCTATGGTCGGAGTGGGCACGCCCTTTGGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 72 bp GGAAAGCCAGCATCAGAGGCACCTTCAGGAGCTTCGTaGCAACCTGGGCAAGCTTCTGGGACAGCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: GKPASEAPSGAS*QPGQASGTAWA
Trigger: AGCCCAGGCTGTCCCAGAAGCTTGCCCAGGTTGGCACGAAGCTCCTGAAGGTGCCTCTGATGCTGGCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 72 bp AAAGAGTGCATCCAGCGAGGTAGGAAGTCCCATGTCTaGAGCCACTTGGGGAGGTGCCCGGGACTTCGGCTC +
Preference number: 6 (lower is better)
Translates to: KECIQRGRKSHV*SHLGRCPGLRL
Trigger: GAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCTACCTCGCTGGATGCACTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CCA 72 bp GCCAACCTGGGCAAGCTTCTGGGACAGCCTGGGCTCTaGCTTTTGCTCCTCTTCCTGAGCCAGCTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: ANLGKLLGQPGL*LLLLFLSQLGR
Trigger: CCTACCAAGCTGGCTCAGGAAGAGGAGCAAAAGCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 72 bp GGTAGGAAGTCCCATGTCTGCAGCCACTTGGGGAGGTaGCCGGGACTTCGGCTCTGCAGGACATTAACAAGC +
Preference number: 6 (lower is better)
Translates to: GRKSHVCSHLGR*PGLRLCRTLTS
Trigger: GCTTGTTAATGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CCA 72 bp AGCATCAGAGGCACCTTCAGGAGCTTCGTGCCAACCTaGGCAAGCTTCTGGGACAGCCTGGGCTCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: SIRGTFRSFVPT*ASFWDSLGSGF
Trigger: AAAGCCAGAGCCCAGGCTGTCCCAGAAGCTTGCCCAGGTTGGCACGAAGCTCCTGAAGGTGCCTCTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 90 bp CAGGAATCCTGTGCAGGACTTGTGGGCTGGGCACATAAGCAAAGGTaGCCCCATGCACCATGTGTCTCCCACGGACTGGAAGTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: QESCAGLVGWAHKQR*PHAPCVSHGLEVGR
Trigger: TCTCCCCACTTCCAGTCCGTGGGAGACACATGGTGCATGGGGCAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 90 bp AAAGAGTGCATCCAGCGAGGTAGGAAGTCCCATGTCTGCAGCCACTaGGGGAGGTGCCCGGGACTTCGGCTCTGCAGGACATTAACAAGC +
Preference number: 6 (lower is better)
Translates to: KECIQRGRKSHVCSH*GRCPGLRLCRTLTS
Trigger: GCTTGTTAATGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCAGACATGGGACTTCCTACCTCGCTGGATGCACTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 72 bp GTGCAGGACTTGTGGGCTGGGCACATAAGCAAAGGTTaGCCCATGCACCATGTGTCTCCCACGGACTGGAAG +
Preference number: 6 (lower is better)
Translates to: VQDLWAGHISKG*PMHHVSPTDWK
Trigger: CTTCCAGTCCGTGGGAGACACATGGTGCATGGGGCAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS GCA 72 bp TGCAGCCACTTGGGGAGGTGCCCGGGACTTCGGCTCTaGAGGACATTAACAAGCACCACAAAGGCCAGTAGA +
Preference number: 6 (lower is better)
Translates to: CSHLGRCPGLRL*RTLTSTTKASR
Trigger: TCTACTGGCCTTTGTGGTGCTTGTTAATGTCCTGCAGAGCCGAAGTCCCGGGCACCTCCCCAAGTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 72 bp TTGAGAAGGTCGGGGGCATCACGGCCACCTCGGATGTaGAAGGAAGCAACCACAAGCCCGGTGACATGGTGT +
Preference number: 6 (lower is better)
Translates to: LRRSGASRPPRM*KEATTSPVTWC
Trigger: ACACCATGTCACCGGGCTTGTGGTTGCTTCCTTCAACATCCGAGGTGGCCGTGATGCCCCCGACCTTCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS CAA 72 bp GCCAGGTCGGGCAGCCCCGTATCCACGAAGATATGGTaGCATTTCTCCATGGTGGTGTTTGCAAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: ARSGSPVSTKIW*HFSMVVFARLP
Trigger: CGGCAGCCTTGCAAACACCACCATGGAGAAATGCAACCATATCTTCGTGGATACGGGGCTGCCCGACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS GCA 72 bp GCTCTTGTGATAAGGCCATCCAGGGGCTGCAAAGAGTaGATCCAGCGAGGTAGGAAGTCCCATGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ALVIRPSRGCKE*IQRGRKSHVCS
Trigger: GCTGCAGACATGGGACTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCTGGATGGCCTTATCACAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 90 bp CTGAAGTCAGTCCTGTCCCCTGCCTGCATCAGGGCCACAATGGTGTaGGTGACAGAGGTTCCGATGTTGGAGCCCATGATGATCGGAATG +
Preference number: 6 (lower is better)
Translates to: LKSVLSPACIRATMV*VTEVPMLEPMMIGM
Trigger: CATTCCGATCATCATGGGCTCCAACATCGGAACCTCTGTCACCAACACCATTGTGGCCCTGATGCAGGCAGGGGACAGGACTGACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS GCA 72 bp CACAAGGTGGCTCTTGTGATAAGGCCATCCAGGGGCTaGAAAGAGTGCATCCAGCGAGGTAGGAAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: HKVALVIRPSRG*KECIQRGRKSH
Trigger: ATGGGACTTCCTACCTCGCTGGATGCACTCTTTGCAGCCCCTGGATGGCCTTATCACAAGAGCCACCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CCA 72 bp GTGAAGGGGGCAGGAAAGTCTGTGTTGATGACCTTCTaGATGACATTGGCCACTTGGCCCTTGAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: VKGAGKSVLMTF*MTLATWPLSRE
Trigger: CTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGTCATCAACACAGACTTTCCTGCCCCCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS CCA 72 bp CATGATGATCGGAATGGCGGAGCTCACCTCCAACACTaGCTTTTGCTCCTCTTCCTGAGCCAGCTTGGTAGG +
Preference number: 6 (lower is better)
Translates to: HDDRNGGAHLQH*LLLLFLSQLGR
Trigger: CCTACCAAGCTGGCTCAGGAAGAGGAGCAAAAGCCAGTGTTGGAGGTGAGCTCCGCCATTCCGATCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224925.2
CDS TCA 72 bp AAGCCTCTGTTGTGTCTGGGTGACACCAAATCCGAATaGGACTGTGATTCCTCAGGGACTCATCCCCCACGG +
Preference number: 6 (lower is better)
Translates to: KPLLCLGDTKSE*DCDSSGTHPPR
Trigger: CCGTGGGGGATGAGTCCCTGAGGAATCACAGTCTCATTCGGATTTGGTGTCACCCAGACACAACAGAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS CCA 72 bp TGGATGTTCCAGGAATCCTGTGCAGGACTTGTGGGCTaGGCACATAAGCAAAGGTTGCCCCATGCACCATGT +
Preference number: 6 (lower is better)
Translates to: WMFQESCAGLVG*AHKQRLPHAPC
Trigger: ACATGGTGCATGGGGCAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATTCCTGGAACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CCA 72 bp ATAGGTGGATGTTCCAGGAATCCTGTGCAGGACTTGTaGGCTGGGCACATAAGCAAAGGTTGCCCCATGCAC +
Preference number: 6 (lower is better)
Translates to: IGGCSRNPVQDL*AGHISKGCPMH
Trigger: GTGCATGGGGCAACCTTTGCTTATGTGCCCAGCCCACAAGTCCTGCACAGGATTCCTGGAACATCCACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 90 bp GTGAAGGGGGCAGGAAAGTCTGTGTTGATGACCTTCTGGATGACATaGGCCACTTGGCCCTTGAGCAGGGAGTTGAGCATCTTCACAAGG +
Preference number: 6 (lower is better)
Translates to: VKGAGKSVLMTFWMT*ATWPLSRELSIFTR
Trigger: CCTTGTGAAGATGCTCAACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGTCATCAACACAGACTTTCCTGCCCCCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS GCA 72 bp ATGCTGACAATGATGGATGTAGAGGTACTGGAACTCTaGACCAGAACTGTCACCAGGATCCCCACCACCAGC +
Preference number: 6 (lower is better)
Translates to: MLTMMDVEVLEL*TRTVTRIPTTS
Trigger: GCTGGTGGTGGGGATCCTGGTGACAGTTCTGGTGCAGAGTTCCAGTACCTCTACATCCATCATTGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000057167.9
ENSMUST00000225259.2
CDS CAA 72 bp GCAGGAAAGTCTGTGTTGATGACCTTCTGGATGACATaGGCCACTTGGCCCTTGAGCAGGGAGTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: AGKSVLMTFWMT*ATWPLSRELSI
Trigger: GATGCTCAACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGTCATCAACACAGACTTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS CAA 90 bp ATGACCTTCTGGATGACATTGGCCACTTGGCCCTTGAGCAGGGAGTaGAGCATCTTCACAAGGAGGATAAGACAAGTGCAGAGAACCACC +
Preference number: 6 (lower is better)
Translates to: MTFWMTLATWPLSRE*SIFTRRIRQVQRTT
Trigger: GGTGGTTCTCTGCACTTGTCTTATCCTCCTTGTGAAGATGCTCAACTCCCTGCTCAAGGGCCAAGTGGCCAATGTCATCCAGAAGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2
CDS CCA 72 bp TACCCTGGACATAGAAGTGGAAGCCTCTGTTGTGTCTaGGTGACACCAAATCCGAATGAGACTGTGATTCCT +
Preference number: 6 (lower is better)
Translates to: YPGHRSGSLCCV*VTPNPNETVIP
Trigger: AGGAATCACAGTCTCATTCGGATTTGGTGTCACCCAGACACAACAGAGGCTTCCACTTCTATGTCCAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057167.9
ENSMUST00000224925.2
ENSMUST00000225259.2