Pregenerated sensors for SLC33A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027822Ensembl transcript IDs: ENSMUST00000029402.15, ENSMUST00000160883.2, ENSMUST00000161659.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGATGGAACCCAAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTaGCCACCCATCCCTCCAGCTCCCACTGCTAATTTTAAAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: VMEPKSPGRAVSALD*PPIPPAPTANFKEV Trigger: TACTTCTTTAAAATTAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTTGGGTTCCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| 3UTR TCA 90 bp | TTGCTCCACTTGATACATTGTACCAACATGTTAAATACGACTCAATaGCAGGCACTAACAATACTTGGCAGCATGGTGACCACCCATGAC | + |
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Preference number: 1 (lower is better) Translates to: LLHLIHCTNMLNTTQ*QALTILGSMVTTHD Trigger: GTCATGGGTGGTCACCATGCTGCCAAGTATTGTTAGTGCCTGTCATTGAGTCGTATTTAACATGTTGGTACAATGTATCAAGTGGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| 3UTR-3UTR CAA 90 bp | GCCCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACGAGCAGTCAGTGCTCTaGACTGCCCACCCATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: AQKRATHLLGLGSQRVVNEQSVL*TAHPSL Trigger: GAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTC...GTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| 3UTR GCA 72 bp | CCCAAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTaGCCACCCATCCCTCCAGCTCCCACTGCTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: PKSPGRAVSALD*PPIPPAPTANF Trigger: AAAATTAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCTAATTACCGCCGCTGCCGACTaGTGTCCTTGTGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: EQSVLLTAHPSLQLPLLITAAAD*CPCGRW Trigger: CCATCTCCCACAAGGACAGCAGTCGGCAGCGGCGGT...AATTAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| 3UTR CAA 72 bp | TGGAACCCAAGTCCCCTGGAAGAGCAGTCAGTGCTCTaGACTGCCCACCCATCCCTCCAGCTCCCACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: WNPSPLEEQSVL*TAHPSLQLPLL Trigger: TAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTTGGGTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCCAGGCCTAAGGGAATaGCCTGAAGCACGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LEEQSVLLTAHPSLQLPLPGLRE*PEARKE Trigger: TTCTTTACGTGCTTCAGGGCATTCCCTTAGGCCTGG...CAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTTGCTGATGAGGAGTaGCAGGATTATCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSPLEEQSVLLTAHPSLQLADEE*QDYLQR Trigger: CCTCTGCAGATAATCCTGCCACTCCTCATCAGCAAG...CTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGGCTTGTAAGTGTCTGTaGTCCCTTGGGTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSPLEEQSVLLTAHPSLQACKCL*SLGSLL Trigger: AAGAAGAGACCCAAGGGATCACAGACACTTACAAGC...CTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | AAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTAGTGGCAGGATTATCTaGAGAGGGACCATTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: KSPGRAVSALDCPPIPPASGRII*RGTIGT Trigger: TGTCCCAATGGTCCCTCTGCAGATAATCCTGCCACT...AGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| 3UTR CAA 72 bp | AGTGCATGCAGCGCCCAGAAGAGAGCAACACATCTCTaGGGACTGGGGTCACAGAGGGTTGTGAACCACCAT | + |
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Preference number: 4 (lower is better) Translates to: SACSAQKRATHL*GLGSQRVVNHH Trigger: ATGGTGGTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGCGCTGCATGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | AAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTAGAGGGAATCCTCCTTaGTGCTCTACTTTAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: KSPGRAVSALDCPPIPPARGNPP*CSTLGV Trigger: GACTCCTAAAGTAGAGCATCAAGGAGGATTCCCTCT...AGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | CTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCCGACAATTCTGGTTTaGAGCTCCTACACATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LEEQSVLLTAHPSLQLPLPTILV*SSYTFL Trigger: AAGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGG...CAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | AAGTCCCCTGGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTTTTGGCCCACAGAATTaGATGTCGAAGCATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KSPGRAVSALDCPPIPPAFGPQN*MSKHSP Trigger: TGGGCTATGCTTCGACATGCAATTCTGTGGGCCAAA...AGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCCAGGGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | CCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACCACACATTCCTTCACTGTaGGGGGATCCACTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PEESNTSLGTGVTEGCEPHIPSL*GDPLAK Trigger: TTTGGCTAGTGGATCCCCTCACAGTGAAGGAATGTG...TGGTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | GCCCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACACATGCTGTACAGAGTaGCCTGATGTAATGCATAAC | + |
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Preference number: 4 (lower is better) Translates to: AQKRATHLLGLGSQRVVNTCCTE*PDVMHN Trigger: GTTATGCATTACATCAGGTCACTCTGTACAGCATGT...GTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGACCGCCGCTGCCGACTaGTGTCCTTGTGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVTAAAD*CPCGRW Trigger: CCATCTCCCACAAGGACAGCAGTCGGCAGCGGCGGT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGATGCCTGACCGCCGCTaGCGACTGCTGTCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVMPDRR*RLLSLW Trigger: CCACAAGGACAGCAGTCGGCAGCGGCGGTCAGGCAT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCTAATTGTGTCTGTGATCCCTTaGGTCTCTTCTTTTACTATT | + |
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Preference number: 4 (lower is better) Translates to: EQSVLLTAHPSLQLPLLIVSVIP*VSSFTI Trigger: AATAGTAAAAGAAGAGACCCAAGGGATCACAGACAC...AATTAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CCA 90 bp | CCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACCAGGTGTCCGACAATTCTaGTTTGAAGCTCCTACACAT | + |
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Preference number: 4 (lower is better) Translates to: PEESNTSLGTGVTEGCEPGVRQF*FEAPTH Trigger: ATGTGTAGGAGCTTCAAACCAGAATTGTCGGACACC...TGGTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | ACCTGGGAGCCTCTCACTGCAGGTAGTAGGCAGAATTATGATGGGAAGGATTTGATTCCTAGTGTATACTaGGTAGGGACAAGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TWEPLTAGSRQNYDGKDLIPSVY*VGTSQD Trigger: GTCCTGGCTTGTCCCTACTCAGTATACACTAGGAAT...CAAATCCTTCCCATCATAATTCTGCCTACTACCTGCAGTGAGAGGCTCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR TCA 90 bp | AGCTCTCCTTCAACCTGGGAGCCTCTCACTGCAGGTAGTAGGCAGAATTATGATAGAAGAATGTCACAGTaGGAGCAACTACATCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSPSTWEPLTAGSRQNYDRRMSQ*EQLHPV Trigger: CACCGGATGTAGTTGCTCTCACTGTGACATTCTTCT...ATCATAATTCTGCCTACTACCTGCAGTGAGAGGCTCCCAGGTTGAAGGAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCATGCCTGACCGCCGCTaGCGACTGCTGTCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGMPDRR*RLLSLW Trigger: CCACAAGGACAGCAGTCGGCAGCGGCGGTCAGGCAT...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCTAATTCAACTTAAGACTGAATaGCCAGAAGACAAAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: EQSVLLTAHPSLQLPLLIQLKTE*PEDKTE Trigger: TTCAGTTTTGTCTTCTGGCCATTCAGTCTTAAGTTG...AATTAGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR GCA 90 bp | TACACACTGATTATCATTGCTTTCTTGGTAACACTAAGCTACAGTTACCTTCTAACCGCCGCTGCCGACTaGTGTCCTTGTGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: YTLIIIAFLVTLSYSYLLTAAAD*CPCGRW Trigger: CCATCTCCCACAAGGACAGCAGTCGGCAGCGGCGGT...TAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAAGCAATGATAATCAGTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGCACATTCCTTCACTGTaGGGGGATCCACTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVHIPSL*GDPLAK Trigger: TTTGGCTAGTGGATCCCCTCACAGTGAAGGAATGTG...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGCCAGGCCTAAGGGAATaGCCTGAAGCACGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVPGLRE*PEARKE Trigger: TTCTTTACGTGCTTCAGGGCATTCCCTTAGGCCTGG...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCAAGTGGCAGGATTATCTaGAGAGGGACCATTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSSGRII*RGTIGT Trigger: TGTCCCAATGGTCCCTCTGCAGATAATCCTGCCACT...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGAGTGGCAGGATTATCTaGAGAGGGACCATTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVSGRII*RGTIGT Trigger: TGTCCCAATGGTCCCTCTGCAGATAATCCTGCCACT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CCA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCACAGCGATGTCCTGTGTaGCAGCCAGGAATTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSQRCPV*QPGIQT Trigger: TGTTTGAATTCCTGGCTGCCACACAGGACATCGCTG...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTCTTGCTGATGAGGAGTaGCAGGATTATCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCLADEE*QDYLQR Trigger: CCTCTGCAGATAATCCTGCCACTCCTCATCAGCAAG...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGATTCCTAGTGTATACTaGGTAGGGACAAGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVIPSVY*VGTSQD Trigger: GTCCTGGCTTGTCCCTACTCAGTATACACTAGGAAT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCAATTCCTAGTGTATACTaGGTAGGGACAAGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSIPSVY*VGTSQD Trigger: GTCCTGGCTTGTCCCTACTCAGTATACACTAGGAAT...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTAGAAGAATGTCACAGTaGGAGCAACTACATCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCRRMSQ*EQLHPV Trigger: CACCGGATGTAGTTGCTCTCACTGTGACATTCTTCT...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGAGAAGAATGTCACAGTaGGAGCAACTACATCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVRRMSQ*EQLHPV Trigger: CACCGGATGTAGTTGCTCTCACTGTGACATTCTTCT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGGCTTGTAAGTGTCTGTaGTCCCTTGGGTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVACKCL*SLGSLL Trigger: AAGAAGAGACCCAAGGGATCACAGACACTTACAAGC...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGAGAGGGAATCCTCCTTaGTGCTCTACTTTAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVRGNPP*CSTLGV Trigger: GACTCCTAAAGTAGAGCATCAAGGAGGATTCCCTCT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTTTGGCCCACAGAATTaGATGTCGAAGCATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVFGPQN*MSKHSP Trigger: TGGGCTATGCTTCGACATGCAATTCTGTGGGCCAAA...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTTTTGGCCCACAGAATTaGATGTCGAAGCATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCFGPQN*MSKHSP Trigger: TGGGCTATGCTTCGACATGCAATTCTGTGGGCCAAA...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCCTTGCTGATGAGGAGTaGCAGGATTATCTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGLADEE*QDYLQR Trigger: CCTCTGCAGATAATCCTGCCACTCCTCATCAGCAAG...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR TCA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCGCTTGTAAGTGTCTGTaGTCCCTTGGGTCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGACKCL*SLGSLL Trigger: AAGAAGAGACCCAAGGGATCACAGACACTTACAAGC...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR TCA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCCACATTCCTTCACTGTaGGGGGATCCACTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSHIPSL*GDPLAK Trigger: TTTGGCTAGTGGATCCCCTCACAGTGAAGGAATGTG...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGCCGACAATTCTGGTTTaGAGCTCCTACACATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVPTILV*SSYTFL Trigger: AAGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGG...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR GCA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCCCAGGCCTAAGGGAATaGCCTGAAGCACGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSPGLRE*PEARKE Trigger: TTCTTTACGTGCTTCAGGGCATTCCCTTAGGCCTGG...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR CCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGGTGTCCGACAATTCTaGTTTGAAGCTCCTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCGVRQF*FEAPTH Trigger: ATGTGTAGGAGCTTCAAACCAGAATTGTCGGACACC...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGGGTGTCCGACAATTCTaGTTTGAAGCTCCTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVGVRQF*FEAPTH Trigger: ATGTGTAGGAGCTTCAAACCAGAATTGTCGGACACC...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCAGAGGGAATCCTCCTTaGTGCTCTACTTTAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSRGNPP*CSTLGV Trigger: GACTCCTAAAGTAGAGCATCAAGGAGGATTCCCTCT...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR TCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTACATGCTGTACAGAGTaGCCTGATGTAATGCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCTCCTE*PDVMHN Trigger: GTTATGCATTACATCAGGTCACTCTGTACAGCATGT...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CCA 90 bp | TACACACTGATTATCATTGCTTTCTTGGTAACACTAAGCTACAGTTACCTTCTACAGCGATGTCCTGTGTaGCAGCCAGGAATTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YTLIIIAFLVTLSYSYLLQRCPV*QPGIQT Trigger: TGTTTGAATTCCTGGCTGCCACACAGGACATCGCTG...TAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAAGCAATGATAATCAGTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTAGCAAACGGTCCACTTaGGTGGATAAATATATCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCSKRST*VDKYIM Trigger: CATGATATATTTATCCACTCAAGTGGACCGTTTGCT...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR TCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGAGCAAACGGTCCACTTaGGTGGATAAATATATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVSKRST*VDKYIM Trigger: CATGATATATTTATCCACTCAAGTGGACCGTTTGCT...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCACATGCTGTACAGAGTaGCCTGATGTAATGCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGTCCTE*PDVMHN Trigger: GTTATGCATTACATCAGGTCACTCTGTACAGCATGT...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCCCGACAATTCTGGTTTaGAGCTCCTACACATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSPTILV*SSYTFL Trigger: AAGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGG...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGGTGTCTGTGATCCCTTaGGTCTCTTCTTTTACTATT | + |
|
Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVVSVIP*VSSFTI Trigger: AATAGTAAAAGAAGAGACCCAAGGGATCACAGACAC...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGCAACTTAAGACTGAATaGCCAGAAGACAAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVQLKTE*PEDKTE Trigger: TTCAGTTTTGTCTTCTGGCCATTCAGTCTTAAGTTG...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCCAACTTAAGACTGAATaGCCAGAAGACAAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGQLKTE*PEDKTE Trigger: TTCAGTTTTGTCTTCTGGCCATTCAGTCTTAAGTTG...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCGTGTCTGTGATCCCTTaGGTCTCTTCTTTTACTATT | + |
|
Preference number: 4 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSVSVIP*VSSFTI Trigger: AATAGTAAAAGAAGAGACCCAAGGGATCACAGACAC...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS CCA 90 bp | CTCCCCGCCCACCGAGTCTCGGCGACTGTCATCCCAGCCGCCCGGTaGCAGCGGGCCACTCTTCATATCCAGAGCGTGGCTAAACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAHRVSATVIPAAR*QRATLHIQSVAKHA Trigger: GGCATGTTTAGCCACGCTCTGGATATGAAGAGTGGCCCGCTGCCACCGGGCGGCTGGGATGACAGTCGCCGAGACTCGGTGGGCGGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS CCA 90 bp | TCCCAGCCGCCCGGTGGCAGCGGGCCACTCTTCATATCCAGAGCGTaGCTAAACATGCCTGACCGCCGCTGCCGACTGCTGTCCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQPPGGSGPLFISRA*LNMPDRRCRLLSLW Trigger: CCACAAGGACAGCAGTCGGCAGCGGCGGTCAGGCATGTTTAGCCACGCTCTGGATATGAAGAGTGGCCCGCTGCCACCGGGCGGCTGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTCCTTCAACCTGGGAGCCTCTCACTGCAGGTAGTAGGCAGAATTATGATTGCCGACTGCTGTCCTaGTGGGAGATGGTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSTWEPLTAGSRQNYDCRLLS*WEMVGD Trigger: GTCACCGACCATCTCCCACAAGGACAGCAGTCGGCA...ATCATAATTCTGCCTACTACCTGCAGTGAGAGGCTCCCAGGTTGAAGGAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACAACGATTCCCCTGGGTaGAGGCTGAAACCGCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AQKRATHLLGLGSQRVVNNDSPG*RLKPQV Trigger: TACTTGCGGTTTCAGCCTCAACCCAGGGGAATCGTT...GTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | GGAAGAGCAGTCAGTGCTCTTGACTGCCCACCCATCCCTCCAGCTCCCACTGCTAGTGTCTGTGATCCCTaGGGTCTCTTCTTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRAVSALDCPPIPPAPTASVCDP*GLFFYY Trigger: ATAGTAAAAGAAGAGACCCAAGGGATCACAGACACT...AGCAGTGGGAGCTGGAGGGATGGGTGGGCAGTCAAGAGCACTGACTGCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | GCCCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACCTGAGAAGCCAATCTTaGACGTTAGAATCAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQKRATHLLGLGSQRVVNLRSQS*TLESEG Trigger: GCCTTCTGATTCTAACGTCAAAGATTGGCTTCTCAG...GTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | GCCCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACTCCGACAATTCTGGTTaGAAGCTCCTACACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQKRATHLLGLGSQRVVNSDNSG*KLLHIP Trigger: AGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGGA...GTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAGAGCAACACATCTCTTGGGACTGGGGTCACAGAGGGTTGTGAACCATCACTGACCTTGGCATaGAAAGCCATTATCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PEESNTSLGTGVTEGCEPSLTLA*KAIIDT Trigger: TGTGTCGATAATGGCTTTCAATGCCAAGGTCAGTGA...TGGTTCACAACCCTCTGTGACCCCAGTCCCAAGAGATGTGTTGCTCTCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | GCTCACAGCTCTCCTTCAACCTGGGAGCCTCTCACTGCAGGTAGTAGGCAGAATGAGCCTCCAAGTTTTTaGCAAAGTTCGATAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AHSSPSTWEPLTAGSRQNEPPSF*QSSIAS Trigger: TGATGCTATCGAACTTTGCAAAAAACTTGGAGGCTC...ATTCTGCCTACTACCTGCAGTGAGAGGCTCCCAGGTTGAAGGAGAGCTGTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTTGCCGACTGCTGTCCTaGTGGGAGATGGTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCCRLLS*WEMVGD Trigger: GTCACCGACCATCTCCCACAAGGACAGCAGTCGGCA...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTGCCGACTGCTGTCCTaGTGGGAGATGGTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVCRLLS*WEMVGD Trigger: GTCACCGACCATCTCCCACAAGGACAGCAGTCGGCA...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS TCA 90 bp | TGTCCTGTGTGGCAGCCAGGAATTCAAACAAGAAGAATGTCACAGTaGGAGCAACTACATCCGGTGTTCTGCCATCAATATTTCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPVWQPGIQTRRMSQ*EQLHPVFCHQYFRA Trigger: TGCTCGGAAATATTGATGGCAGAACACCGGATGTAGTTGCTCTCACTGTGACATTCTTCTTGTTTGAATTCCTGGCTGCCACACAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS CCA 90 bp | GTAGACGGCATCAACCAAGGGAGCCCAGAGCAACTTAAGACTGAATaGCCAGAAGACAAAACTGAAGAAAGCCTGATCTGTATAGCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VDGINQGSPEQLKTE*PEDKTEESLICIAN Trigger: GTTAGCTATACAGATCAGGCTTTCTTCAGTTTTGTCTTCTGGCCATTCAGTCTTAAGTTGCTCTGGGCTCCCTTGGTTGATGCCGTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGGGACAAGCCAGGACTaGCGACGACCAAAGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCGTSQD*RRPKFL Trigger: TAAGAACTTTGGTCGTCGCAAGTCCTGGCTTGTCCC...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCAGGGACAAGCCAGGACTaGCGACGACCAAAGTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSGTSQD*RRPKFL Trigger: TAAGAACTTTGGTCGTCGCAAGTCCTGGCTTGTCCC...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCAAACGATTCCCCTGGGTaGAGGCTGAAACCGCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSNDSPG*RLKPQV Trigger: TACTTGCGGTTTCAGCCTCAACCCAGGGGAATCGTT...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCAACGATTCCCCTGGGTaGAGGCTGAAACCGCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGNDSPG*RLKPQV Trigger: TACTTGCGGTTTCAGCCTCAACCCAGGGGAATCGTT...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
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| CDS-3UTR CAA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGCTGAGAAGCCAATCTTaGACGTTAGAATCAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVLRSQS*TLESEG Trigger: GCCTTCTGATTCTAACGTCAAAGATTGGCTTCTCAG...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCATCACTGACCTTGGCATaGAAAGCCATTATCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSSLTLA*KAIIDT Trigger: TGTGTCGATAATGGCTTTCAATGCCAAGGTCAGTGA...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
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| CDS-3UTR CAA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCCGACAATTCTGGTTaGAAGCTCCTACACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVSDNSG*KLLHIP Trigger: AGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGGA...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTAGTGTCTGTGATCCCTaGGGTCTCTTCTTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHNHKHTTNLIPSLVVCSVCDP*GLFFYY Trigger: ATAGTAAAAGAAGAGACCCAAGGGATCACAGACACT...ACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGGTAACACTAAGCTACAGTTACCTTCTAGAATGTCCAGTAATGTTGGCTCCGACAATTCTGGTTaGAAGCTCCTACACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLGNTKLQLPSRMSSNVGSDNSG*KLLHIP Trigger: AGGAATGTGTAGGAGCTTCAAACCAGAATTGTCGGA...GCCAACATTACTGGACATTCTAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR CAA 90 bp | AGTCATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGGAGCCTCCAAGTTTTTaGCAAAGTTCGATAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHNHKHTTNLIPSLVVCVEPPSF*QSSIAS Trigger: TGATGCTATCGAACTTTGCAAAAAACTTGGAGGCTC...CACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CAA 90 bp | CATAATCACAAACACACCACAAACTTGATCCCCTCATTAGTTGTCTGTGTGTCAGAGCCTCCAAGTTTTTaGCAAAGTTCGATAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HNHKHTTNLIPSLVVCVSEPPSF*QSSIAS Trigger: TGATGCTATCGAACTTTGCAAAAAACTTGGAGGCTC...TGACACACAGACAACTAATGAGGGGATCAAGTTTGTGGTGTGTTTGTGATTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCTCACTGACCTTGGCATaGAAAGCCATTATCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSSLTLA*KAIIDT Trigger: TGTGTCGATAATGGCTTTCAATGCCAAGGTCAGTGA...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR CAA 90 bp | ACTTCCAATAAGGTTAATCTAGTTAGTGAGTACCTGCATATTAAGCTTTGCTCCAGTGTCTGTGATCCCTaGGGTCTCTTCTTTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: TSNKVNLVSEYLHIKLCSSVCDP*GLFFYY Trigger: ATAGTAAAAGAAGAGACCCAAGGGATCACAGACACT...GGAGCAAAGCTTAATATGCAGGTACTCACTAACTAGATTAACCTTATTGGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS-3UTR CAA 90 bp | TACACACTGATTATCATTGCTTTCTTGGTAACACTAAGCTACAGTTACCTTCTACTGAGAAGCCAATCTTaGACGTTAGAATCAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLIIIAFLVTLSYSYLLLRSQS*TLESEG Trigger: GCCTTCTGATTCTAACGTCAAAGATTGGCTTCTCAG...TAGAAGGTAACTGTAGCTTAGTGTTACCAAGAAAGCAATGATAATCAGTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029402.15 |
||
| CDS CCA 72 bp | CACCGAGTCTCGGCGACTGTCATCCCAGCCGCCCGGTaGCAGCGGGCCACTCTTCATATCCAGAGCGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRVSATVIPAAR*QRATLHIQSVA Trigger: AGCCACGCTCTGGATATGAAGAGTGGCCCGCTGCCACCGGGCGGCTGGGATGACAGTCGCCGAGACTCGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
||
| CDS CCA 72 bp | CCCGGTGGCAGCGGGCCACTCTTCATATCCAGAGCGTaGCTAAACATGCCTGACCGCCGCTGCCGACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGGSGPLFISRA*LNMPDRRCRLL Trigger: CAGCAGTCGGCAGCGGCGGTCAGGCATGTTTAGCCACGCTCTGGATATGAAGAGTGGCCCGCTGCCACCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
||
| CDS GCA 72 bp | ATATCCAGAGCGTGGCTAAACATGCCTGACCGCCGCTaGCGACTGCTGTCCTTGTGGGAGATGGTCGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ISRAWLNMPDRR*RLLSLWEMVGD Trigger: GTCACCGACCATCTCCCACAAGGACAGCAGTCGGCAGCGGCGGTCAGGCATGTTTAGCCACGCTCTGGATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
||
| CDS TCA 72 bp | GCCACTCTTCATATCCAGAGCGTGGCTAAACATGCCTaGCCGCCGCTGCCGACTGCTGTCCTTGTGGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ATLHIQSVAKHA*PPLPTAVLVGD Trigger: ATCTCCCACAAGGACAGCAGTCGGCAGCGGCGGTCAGGCATGTTTAGCCACGCTCTGGATATGAAGAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
||
| CDS GCA 72 bp | TGCCCAAAAAGTAGCCAGCTGTTTGGCCCACAGAATTaGATGTCGAAGCATAGCCCACGTTTTCCCGGGATA | + |
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Preference number: 6 (lower is better) Translates to: CPKSSQLFGPQN*MSKHSPRFPGI Trigger: TATCCCGGGAAAACGTGGGCTATGCTTCGACATGCAATTCTGTGGGCCAAACAGCTGGCTACTTTTTGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS TCA 72 bp | TGGCAGCCAGGAATTCAAACAAGAAGAATGTCACAGTaGGAGCAACTACATCCGGTGTTCTGCCATCAATAT | + |
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Preference number: 6 (lower is better) Translates to: WQPGIQTRRMSQ*EQLHPVFCHQY Trigger: ATATTGATGGCAGAACACCGGATGTAGTTGCTCTCACTGTGACATTCTTCTTGTTTGAATTCCTGGCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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| CDS TCA 72 bp | GTGGATAAATATATCATGAAGATTCCTAGTGTATACTaGGTAGGGACAAGCCAGGACTTGCGACGACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VDKYIMKIPSVY*VGTSQDLRRPK Trigger: CTTTGGTCGTCGCAAGTCCTGGCTTGTCCCTACTCAGTATACACTAGGAATCTTCATGATATATTTATCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029402.15 ENSMUST00000160883.2 ENSMUST00000161659.8 |
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