Pregenerated sensors for SLC31A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066152Ensembl transcript IDs: ENSMUST00000084530.9, ENSMUST00000107467.3, ENSMUST00000107468.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGTACAATGTCTaGAACAGAGGCCCCAGCTCTCTCCAGCCCTCCGCACTGCACATC | + |
|
Preference number: 1 (lower is better) Translates to: VSNGHHKEKQLKYNV*NRGPSSLQPSALHI Trigger: GATGTGCAGTGCGGAGGGCTGGAGAGAGCTGGGGCCTCTGTTCCAGACATTGTACTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| 3UTR GCA 90 bp | GGTTCCATGGCCTTGACCACTGAAGCTCTTTGGAAAACTTTAATTTaGAGTCAGAGATCTGTGTCACAGGCTGGCCACCCTACCTCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: GSMALTTEALWKTLI*SQRSVSQAGHPTSS Trigger: GCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTCCAAAGAGCTTCAGTGGTCAAGGCCATGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR CCA 90 bp | TCTTTGGAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTaGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCCCTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: SLENFNLQSEICVTG*PPYLQLLVSPCSLW Trigger: CCAAAGGGAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTCCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR CCA 90 bp | AGAAGAGAGTATCCAGGTTCCATGGCCTTGACCACTGAAGCTCTTTaGAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: RREYPGSMALTTEAL*KTLICSQRSVSQAG Trigger: GCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTCCAAAGAGCTTCAGTGGTCAAGGCCATGGAACCTGGATACTCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR TCA 90 bp | AAAGTGAAAAGGCTCAAATATCTGGAGTCCACCAAACTCTTAAAATaGCCTAGCTTTGGTTTGATTGCTATTGCACCCTCAGTCAGTACC | + |
|
Preference number: 1 (lower is better) Translates to: KVKRLKYLESTKLLK*PSFGLIAIAPSVST Trigger: GGTACTGACTGAGGGTGCAATAGCAATCAAACCAAAGCTAGGTCATTTTAAGAGTTTGGTGGACTCCAGATATTTGAGCCTTTTCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCGGCACCACAGGAGCCTaGGCCCTAGAGAGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DLCHRLATLPPASGLSMFGTTGA*ALERLG Trigger: CCCCAGCCTCTCTAGGGCCCAGGCTCCTGTGGTGCC...GAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTAAAGTCTCCAGGAACTaGGAAAGAGGTGAGCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: EICVTGWPPYLQLLVSPCKVSRN*ERGEQW Trigger: CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTT...ACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGGCTGGGGAGGGAGGTAGCTTCAATGGCTTCTAAGCTCCAGGGACCATTTAAAGTCTCCAGGAACTaGGAAAGAGGTGAGCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: ERLGREVASMASKLQGPFKVSRN*ERGEQW Trigger: CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTT...AAATGGTCCCTGGAGCTTAGAAGCCATTGAAGCTACCTCCCTCCCCAGCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTATAAGGAAAAGCAGCTaGAGTACAATGTCTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: EICVTGWPPYLQLLVSPCIRKSS*STMSGT Trigger: TGTTCCAGACATTGTACTTCAGCTGCTTTTCCTTAT...ACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCGCTCCAGGGACCATTTaGTGGTTTCATCTCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TLICSQRSVSQAGHPTSSAPGTI*WFHLKV Trigger: GACTTTGAGATGAAACCAGCAAATGGTCCCTGGAGC...GCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGACCCTGACATTAAGGCACAAAGCAGAAGAGAGTATCCAGGTTCCATGGCCTGCTCCAGGGACCATTTaGTGGTTTCATCTCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: MTLTLRHKAEESIQVPWPAPGTI*WFHLKV Trigger: GACTTTGAGATGAAACCAGCAAATGGTCCCTGGAGC...AGGCCATGGAACCTGGATACTCTCTTCTGCTTTGTGCCTTAATGTCAGGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGCCACCCTACCTCAAAGTCTCCAGGAACTaGGAAAGAGGTGAGCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: ENFNLQSEICVTGWPPYLKVSRN*ERGEQW Trigger: CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTT...GAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGACCCTGACATTAAGGCACAAAGCAGAAGAGAGTATCCAGGTTCCATGGCCTATAAGGAAAAGCAGCTaGAGTACAATGTCTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: MTLTLRHKAEESIQVPWPIRKSS*STMSGT Trigger: TGTTCCAGACATTGTACTTCAGCTGCTTTTCCTTAT...AGGCCATGGAACCTGGATACTCTCTTCTGCTTTGTGCCTTAATGTCAGGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTTGAACACAGACATTATAAAGTATGTAGCAGTGATTGTTGTGTGTGTGTGTCTGTGTATCTCAGGCTaGCCTGCAACTCTCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: YLNTDIIKYVAVIVVCVCLCISG*PATLYV Trigger: TACATAGAGAGTTGCAGGCCAGCCTGAGATACACAG...ACACACACACACAACAATCACTGCTACATACTTTATAATGTCTGTGTTCAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR TCA 72 bp | CCTCTCTGGTGCACACAAGAGGCTCGGGCAAGGCTCTaGCCACTAACCTGCTGCAGGCAGTGCTGTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLWCTQEARARL*PLTCCRQCCQT Trigger: TGTCTGACAGCACTGCCTGCAGCAGGTTAGTGGTCAGAGCCTTGCCCGAGCCTCTTGTGTGCACCAGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACCCTCAGTCAGTACCCAGCCCCAGCACACCCCTGCTGAGTCAGTACTAAAGCCAGGTTCCATGGCCTaGACCACTGAAGCTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: APSVSTQPQHTPAESVLKPGSMA*TTEALW Trigger: CCAAAGAGCTTCAGTGGTCAAGGCCATGGAACCTGG...CTTTAGTACTGACTCAGCAGGGGTGTGCTGGGGCTGGGTACTGACTGAGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR CCA 72 bp | CTCAGGCTGGCCTGCAACTCTCTATGTAGCTCAAGCTaGCCTCAAAGTCGCAATCTCCTGCCTCAGCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRLACNSLCSSS*PQSRNLLPQPP Trigger: GGGAGGCTGAGGCAGGAGATTGCGACTTTGAGGCCAGCTTGAGCTACATAGAGAGTTGCAGGCCAGCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR GCA 72 bp | TCTGGTCTCTCCATGTTCCCTTTGGTCACAGCTACTTaGTTAAGGCACCACAGGAGCCTGGGCCCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGLSMFPLVTAT*LRHHRSLGPRE Trigger: CTCTCTAGGGCCCAGGCTCCTGTGGTGCCTTAAGCAAGTAGCTGTGACCAAAGGGAACATGGAGAGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR TCA 72 bp | CAGCCCCAGCACACCCCTGCTGAGTCAGTACTAAAGTaGCTGACTCACATTTCCTACCAGATCATTAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPQHTPAESVLK*LTHISYQIIRS Trigger: ACTCCTAATGATCTGGTAGGAAATGTGAGTCAGTCACTTTAGTACTGACTCAGCAGGGGTGTGCTGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR CCA 72 bp | AACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTaGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: NFNLQSEICVTG*PPYLQLLVSPC Trigger: ACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTTTTACTGTGTATCTCAGGCTaGCCTGCAACTCTCTATGTAGCTCAAGCTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVLLCISG*PATLYVAQAGL Trigger: GAGGCCAGCTTGAGCTACATAGAGAGTTGCAGGCCAGCCTGAGATACACAGTAAAACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR TCA 72 bp | TCAATGACAATCCTCATGTGTTCCAAGGCAAAAAGGTaGGAACAAGGAGCTGGCGTGGTCTGTCCCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMTILMCSKAKR*EQGAGVVCPLK Trigger: CTTTAGGGGACAGACCACGCCAGCTCCTTGTTCTCACCTTTTTGCCTTGGAACACATGAGGATTGTCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTTTTACTGTGTATCTCAGGCTGGCCTaGAACTCTCTATGTAGCTCAAGCTGGCCTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCFTVYLRLA*NSLCSSSWPQS Trigger: ACTTTGAGGCCAGCTTGAGCTACATAGAGAGTTGCAGGCCAGCCTGAGATACACAGTAAAACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGGAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGCCACCCCTCTCCATGTTCCCTTaGGTCACAGCTACTTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLENFNLQSEICVTGWPPLSMFP*VTATCL Trigger: TAAGCAAGTAGCTGTGACCAAAGGGAACATGGAGAG...GGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTCCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| 3UTR CCA 72 bp | TATCCAGGTTCCATGGCCTTGACCACTGAAGCTCTTTaGAAAACTTTAATTTGCAGTCAGAGATCTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: YPGSMALTTEAL*KTLICSQRSVS Trigger: TGACACAGATCTCTGACTGCAAATTAAAGTTTTCCAAAGAGCTTCAGTGGTCAAGGCCATGGAACCTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS-3UTR CCA 90 bp | GATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCACTGCTGGCTGTTGGTaGCAGGCAGGCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLCHRLATLPPASGLSMFTAGCW*QAGSPE Trigger: CTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGT...GAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCCCTTTGGTCTGGTCCCAAGATaGACTGCTGGCTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQAGHPTSSFWSLHVPFGLVPR*TAGCWW Trigger: CCACCAACAGCCAGCAGTTCATCTTGGGACCAGACC...AAAGGGAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCCCTTTGGTCACATGCCTGTAGGGCTGTaGACCCTCCAGAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGHPTSSFWSLHVPFGHMPVGL*TLQKSK Trigger: CTTTGATTTCTGGAGGGTCCACAGCCCTACAGGCAT...GTGACCAAAGGGAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGACTGCTGGCTGTTGGTaGCAGGCAGGCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTGKEVSNGHHKEKQLKTAGCW*QAGSPE Trigger: CTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGT...CTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | TATGTAGCTCAAGCTGGCCTCAAAGTCGCAATCTCCTGCCTCAGCCTCCCACATCAAGACTACCAGCACTaGGAGAGCCATGCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVAQAGLKVAISCLSLPHQDYQH*ESHACR Trigger: CCTACAGGCATGGCTCTCTCAGTGCTGGTAGTCTTG...ATGTGGGAGGCTGAGGCAGGAGATTGCGACTTTGAGGCCAGCTTGAGCTACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS-3UTR TCA 90 bp | GGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATGGTCTGGTCCCAAGATaGACTGCTGGCTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFISKSPGTGKEVSNGHHGLVPR*TAGCWW Trigger: CCACCAACAGCCAGCAGTTCATCTTGGGACCAGACC...ATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGGAGGGAGGTAGCTTCAATGGCTTCTAAGCTCCAGGGACCATTTGCTATGCCTGTAGGGCTGTaGACCCTCCAGAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGREVASMASKLQGPFAMPVGL*TLQKSK Trigger: CTTTGATTTCTGGAGGGTCCACAGCCCTACAGGCAT...AGCAAATGGTCCCTGGAGCTTAGAAGCCATTGAAGCTACCTCCCTCCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGTGTCACAGGCTGGCCACCCTACCTCCAGCTTCTGGTCTCTCCATGTTCCTCTCCAGAGTCTTGTaGAGCAATTTGGCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLCHRLATLPPASGLSMFLSRVL*SNLALP Trigger: TGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAG...GAACATGGAGAGACCAGAAGCTGGAGGTAGGGTGGCCAGCCTGTGACACAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCACTGCTGGCTGTTGGTaGCAGGCAGGCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAGFISKSPGTGKEVSNGTAGCW*QAGSPE Trigger: CTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGT...GCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGTACAATGTCTGGAACCAAGACTACCAGCACTaGGAGAGCCATGCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSNGHHKEKQLKYNVWNQDYQH*ESHACR Trigger: CCTACAGGCATGGCTCTCTCAGTGCTGGTAGTCTTG...GTTCCAGACATTGTACTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGTAGCTTCAATGGCTTCTAAGCTCCAGGGACCATTTGCTGGTTTCCTCTCCAGAGTCTTGTaGAGCAATTTGGCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GREVASMASKLQGPFAGFLSRVL*SNLALP Trigger: TGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAG...GAAACCAGCAAATGGTCCCTGGAGCTTAGAAGCCATTGAAGCTACCTCCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCAAGACTACCAGCACTaGGAGAGCCATGCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICWFHLKVSRNWERGEQWQDYQH*ESHACR Trigger: CCTACAGGCATGGCTCTCTCAGTGCTGGTAGTCTTG...CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCCTGACATTAAGGCACAAAGCAGAAGAGAGTATCCAGGTTCCATGGCCTTGGCTTTGCCAACCTTaGTGCCCTCATACAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: MTLTLRHKAEESIQVPWPWLCQP*CPHTVL Trigger: CAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCA...AGGCCATGGAACCTGGATACTCTCTTCTGCTTTGTGCCTTAATGTCAGGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGTACAATGTCTGGAACATGCCTGTAGGGCTGTaGACCCTCCAGAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVSNGHHKEKQLKYNVWNMPVGL*TLQKSK Trigger: CTTTGATTTCTGGAGGGTCCACAGCCCTACAGGCAT...GTTCCAGACATTGTACTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGAAGCACGGCCTCATCTaGGAAGATGAAATGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICWFHLKVSRNWERGEQWKHGLI*EDEMHR Trigger: CCGATGCATTTCATCTTCTCAGATGAGGCCGTGCTT...CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS-3UTR TCA 90 bp | GAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGCCACCCTACCTCAGGTGTTGTAGGACATaGCAGCCAGCATCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENFNLQSEICVTGWPPYLRCCRT*QPASQS Trigger: ACTTTGTGATGCTGGCTGTCATGTCCTACAACACCT...GAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCAGGTGTTGTAGGACATaGCAGCCAGCATCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FAGFISKSPGTGKEVSNGRCCRT*QPASQS Trigger: ACTTTGTGATGCTGGCTGTCATGTCCTACAACACCT...GCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTTTTACTGTGTATCTCAGGCTGGCCTGCAACTCTCTATGTAAGGTGTTGTAGGACATaGCAGCCAGCATCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVLLCISGWPATLYVRCCRT*QPASQS Trigger: ACTTTGTGATGCTGGCTGTCATGTCCTACAACACCT...TACATAGAGAGTTGCAGGCCAGCCTGAGATACACAGTAAAACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| 3UTR CAA 72 bp | GCACAAAGCAGAAGAGAGTATCCAGGTTCCATGGCCTaGACCACTGAAGCTCTTTGGAAAACTTTAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSRREYPGSMA*TTEALWKTLIC Trigger: GCAAATTAAAGTTTTCCAAAGAGCTTCAGTGGTCAAGGCCATGGAACCTGGATACTCTCTTCTGCTTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS GCA 90 bp | GTTGATCTGGAGCCTGTAGAATCCTGGTCTGGTCCCAAGATGAACTaGTGGCTGTTGGTGGCAGGCAGGCTCTCCAGAGTCTTGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDLEPVESWSGPKMN*WLLVAGRLSRVLWS Trigger: GCTCCACAAGACTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCATCTTGGGACCAGACCAGGATTCTACAGGCTCCAGATCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAGGTAGCTTCAATGGCTTCTAAGCTCCAGGGACCATTTGCTGGTTTCATGAACTGCTGGCTGTaGGTGGCAGGCAGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GREVASMASKLQGPFAGFMNCWL*VAGRLS Trigger: GGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCAT...GAAACCAGCAAATGGTCCCTGGAGCTTAGAAGCCATTGAAGCTACCTCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCTGGTGCACACAAGAGGCTCGGGCAAGGCTCTGACCACTAACCTGCTGTTGGCTTTGCCAACCTaGATGCCCTCATACAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSLVHTRGSGKALTTNLLLALPT*MPSYST Trigger: AGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAA...CAGCAGGTTAGTGGTCAGAGCCTTGCCCGAGCCTCTTGTGTGCACCAGAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGCTGGGGAGGGAGGTAGCTTCAATGGCTTCTAAGCTCCAGGGACCATTTCTGAGGCGGGTCCTATaGTCTGAAGTTGATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERLGREVASMASKLQGPFLRRVL*SEVDLE Trigger: CTCCAGATCAACTTCAGACAATAGGACCCGCCTCAG...AAATGGTCCCTGGAGCTTAGAAGCCATTGAAGCTACCTCCCTCCCCAGCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS TCA 90 bp | GCAGGCTCTCCAGAGTCTTGTGGAGCAATTTGGCTTTGCCAACCTTaGTGCCCTCATACAGTACTGCCAGGAGCAAGACTACCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSPESCGAIWLCQP*CPHTVLPGARLPAL Trigger: CAGTGCTGGTAGTCTTGCTCCTGGCAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGTACAATGTCTGGAACATGAACTGCTGGCTGTaGGTGGCAGGCAGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSNGHHKEKQLKYNVWNMNCWL*VAGRLS Trigger: GGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCAT...GTTCCAGACATTGTACTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATAAGGAAAAGATGAACTGCTGGCTGTaGGTGGCAGGCAGGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSPGTGKEVSNGHHKEKMNCWL*VAGRLS Trigger: GGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCAT...CTTTTCCTTATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATTGGAGCAATTTGGCTTaGCCAACCTTGATGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFISKSPGTGKEVSNGHHWSNLA*PTLMPS Trigger: TGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCA...ATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACTTTAATTTGCAGTCAGAGATCTGTGTCACAGGCTGGCCACCCTACCTCCTGAGGCGGGTCCTATaGTCTGAAGTTGATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ENFNLQSEICVTGWPPYLLRRVL*SEVDLE Trigger: CTCCAGATCAACTTCAGACAATAGGACCCGCCTCAG...GAGGTAGGGTGGCCAGCCTGTGACACAGATCTCTGACTGCAAATTAAAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCTGAGGCGGGTCCTATaGTCTGAAGTTGATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FAGFISKSPGTGKEVSNGLRRVL*SEVDLE Trigger: CTCCAGATCAACTTCAGACAATAGGACCCGCCTCAG...GCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | GGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATGTCTTGTGGAGCAATTaGGCTTTGCCAACCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GFISKSPGTGKEVSNGHHVLWSN*ALPTLM Trigger: CATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGAC...ATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGCCACCATAAGGAAAAGTTGGCTTTGCCAACCTaGATGCCCTCATACAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SKSPGTGKEVSNGHHKEKLALPT*MPSYST Trigger: AGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAA...CTTTTCCTTATGGTGGCCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGTTGGCTTTGCCAACCTaGATGCCCTCATACAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: ICWFHLKVSRNWERGEQWLALPT*MPSYST Trigger: AGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAA...CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCTGGTTTCATCTCAAAGTCTCCAGGAACTGGGAAAGAGGTGAGCAATGGGTCTTGTGGAGCAATTaGGCTTTGCCAACCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ICWFHLKVSRNWERGEQWVLWSN*ALPTLM Trigger: CATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGAC...CCATTGCTCACCTCTTTCCCAGTTCCTGGAGACTTTGAGATGAAACCAGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAAAGAGGTGAGCAATGGCCACCATAAGGAAAAGCAGCTGAAGTACAATGTCTTGTGGAGCAATTaGGCTTTGCCAACCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGKEVSNGHHKEKQLKYNVLWSN*ALPTLM Trigger: CATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGAC...ATTGTACTTCAGCTGCTTTTCCTTATGGTGGCCATTGCTCACCTCTTTCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGAACACAGACATTATAAAGTATGTAGCAGTGATTGTTGTGTGTGTGTGTTGGAGCAATTTGGCTTaGCCAACCTTGATGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YLNTDIIKYVAVIVVCVCWSNLA*PTLMPS Trigger: TGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCA...ACACACACACACAACAATCACTGCTACATACTTTATAATGTCTGTGTTCAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084530.9 |
||
| CDS CAA 72 bp | GAATCCTGGTCTGGTCCCAAGATGAACTGCTGGCTGTaGGTGGCAGGCAGGCTCTCCAGAGTCTTGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ESWSGPKMNCWL*VAGRLSRVLWS Trigger: GCTCCACAAGACTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCATCTTGGGACCAGACCAGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS CAA 90 bp | GGCAGGCTCTCCAGAGTCTTGTGGAGCAATTTGGCTTTGCCAACCTaGATGCCCTCATACAGTACTGCCAGGAGCAAGACTACCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: GRLSRVLWSNLALPT*MPSYSTARSKTTST Trigger: AGTGCTGGTAGTCTTGCTCCTGGCAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS CAA 90 bp | TTGGTGGCAGGCAGGCTCTCCAGAGTCTTGTGGAGCAATTTGGCTTaGCCAACCTTGATGCCCTCATACAGTACTGCCAGGAGCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LVAGRLSRVLWSNLA*PTLMPSYSTARSKT Trigger: AGTCTTGCTCCTGGCAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAGCCTGCCTGCCACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS CAA 72 bp | GTGGCAGGCAGGCTCTCCAGAGTCTTGTGGAGCAATTaGGCTTTGCCAACCTTGATGCCCTCATACAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: VAGRLSRVLWSN*ALPTLMPSYST Trigger: AGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAGCCTGCCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS CAA 90 bp | AAGATGAACTGCTGGCTGTTGGTGGCAGGCAGGCTCTCCAGAGTCTaGTGGAGCAATTTGGCTTTGCCAACCTTGATGCCCTCATACAGT | + |
|
Preference number: 6 (lower is better) Translates to: KMNCWLLVAGRLSRV*WSNLALPTLMPSYS Trigger: ACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGAGAGCCTGCCTGCCACCAACAGCCAGCAGTTCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS TCA 72 bp | GGACTAGGGACTGGCCAAAGTAACACAAAAACCACCTaGGGCGGGTCCTATTGTCTGAAGTTGATCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLGTGQSNTKTT*GGSYCLKLIWS Trigger: GCTCCAGATCAACTTCAGACAATAGGACCCGCCTCAGGTGGTTTTTGTGTTACTTTGGCCAGTCCCTAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS TCA 72 bp | CCAGAGTCTTGTGGAGCAATTTGGCTTTGCCAACCTTaGTGCCCTCATACAGTACTGCCAGGAGCAAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: PESCGAIWLCQP*CPHTVLPGARL Trigger: TAGTCTTGCTCCTGGCAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS TCA 72 bp | GGACCACACCGAGGAAAATCCAGGTGTTGTAGGACATaGCAGCCAGCATCACAAAGTAGCCAATTACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GPHRGKSRCCRT*QPASQSSQLPP Trigger: AGGTGGTAATTGGCTACTTTGTGATGCTGGCTGTCATGTCCTACAACACCTGGATTTTCCTCGGTGTGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS CAA 72 bp | TCCAGAGTCTTGTGGAGCAATTTGGCTTTGCCAACCTaGATGCCCTCATACAGTACTGCCAGGAGCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SRVLWSNLALPT*MPSYSTARSKT Trigger: AGTCTTGCTCCTGGCAGTACTGTATGAGGGCATCAAGGTTGGCAAAGCCAAATTGCTCCACAAGACTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||
| CDS TCA 72 bp | CAGCCAGCATCACAAAGTAGCCAATTACCACCTGAATaGCATGGACTAGGGACTGGCCAAAGTAACACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPASQSSQLPPE*HGLGTGQSNTK Trigger: TTTTGTGTTACTTTGGCCAGTCCCTAGTCCATGTCATTCAGGTGGTAATTGGCTACTTTGTGATGCTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084530.9 ENSMUST00000107467.3 ENSMUST00000107468.8 |
||