Pregenerated sensors for SLC31A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066150Ensembl transcript IDs: ENSMUST00000084526.12, ENSMUST00000122092.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTGGTCTCAAATTCACTGTGTAGCCAAGGATAGCCTTGAATTCTaGTCCTCCAGCCTTCTCCAAGTGCTGGGACTACCGGCATCCATC | + |
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Preference number: 1 (lower is better) Translates to: SWSQIHCVAKDSLEF*SSSLLQVLGLPASI Trigger: GATGGATGCCGGTAGTCCCAGCACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATCCTTGGCTACACAGTGAATTTGAGACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| 3UTR CCA 90 bp | CCAAGGATAGCCTTGAATTCTGGTCCTCCAGCCTTCTCCAAGTGCTaGGACTACCGGCATCCATCATATCTGATTAGATTTAACTCGACA | + |
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Preference number: 1 (lower is better) Translates to: PRIALNSGPPAFSKC*DYRHPSYLIRFNST Trigger: TGTCGAGTTAAATCTAATCAGATATGATGGATGCCGGTAGTCCCAGCACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| 3UTR GCA 90 bp | ACCTACATAGTGCACACTGAGAACAACTGGCTATTGGCAGACACATaGCCCATGTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: TYIVHTENNWLLADT*PMSLQTRKLGFCLS Trigger: AGAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGACATGGGGCATGTGTCTGCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR TCA 90 bp | CTTCTATTCAGTAGGTGTGTATGTATAGACAGGAGAGAGAAGGGATaGTTGGAAAGGGAATCATATCTTCCAGTCCCAAGATGCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LLFSRCVCIDRREKG*LERESYLPVPRCFL Trigger: TAGGAAGCATCTTGGGACTGGAAGATATGATTCCCTTTCCAATCATCCCTTCTCTCTCCTGTCTATACATACACACCTACTGAATAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCCTGCGCACAGGAGCAGTGAGGAGACTGATGGATGCCGAGGAGGTTCCTGAGAGAAGGGATGATTaGAAAGGGAATCATATCTTC | + |
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Preference number: 2 (lower is better) Translates to: TALRTGAVRRLMDAEEVPERRDD*KGNHIF Trigger: GAAGATATGATTCCCTTTCCAATCATCCCTTCTCTC...AGGAACCTCCTCGGCATCCATCAGTCTCCTCACTGCTCCTGTGCGCAGGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCCTGCGCACAGGAGCAGTGAGGAGACTGATGGATGCCGAGGAGGTTCCTCCCACACACTGTATGTaGGTATACATAAAACATATT | + |
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Preference number: 2 (lower is better) Translates to: TALRTGAVRRLMDAEEVPPTHCM*VYIKHI Trigger: AATATGTTTTATGTATACCCACATACAGTGTGTGGG...AGGAACCTCCTCGGCATCCATCAGTCTCCTCACTGCTCCTGTGCGCAGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCCTGCGCACAGGAGCAGTGAGGAGACTGATGGATGCCGAGGAGGTTCCTCTTAAAACCTTTTCTTaGTTCAAAGCCACCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TALRTGAVRRLMDAEEVPLKTFS*FKATKV Trigger: TACTTTGGTGGCTTTGAACCAAGAAAAGGTTTTAAG...AGGAACCTCCTCGGCATCCATCAGTCTCCTCACTGCTCCTGTGCGCAGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTAAGGAGAGTCAGACCTaGGCACCTGCAGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNKPACRLMIDRTSNEILKESQT*APAAQE Trigger: CTCCTGAGCTGCAGGTGCCCAGGTCTGACTCTCCTT...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGCTGCATCTCAGCCCCTaGAAGGTGTTTTATAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKLHLSP*KVFYSS Trigger: GCTGCTATAAAACACCTTTCAGGGGCTGAGATGCAG...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTGGGAAGCTCAGCATCTaGTGCCTGGGGATAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GNKPACRLMIDRTSNEILGKLSI*CLGISR Trigger: TCTGCTTATCCCCAGGCAGCAGATGCTGAGCTTCCC...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGCTACATAGTGCACACTaGGAACAACTGGCTATTGGC | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKLHSAH*EQLAIG Trigger: GCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAG...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCGGGAGCTTACATAAGCTAGGTAAGTaGCTCACACCAGAGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CTQHLNIPITATLLSGSLHKLGK*LTPELH Trigger: ATGCAGCTCTGGTGTGAGTCACTTACCTAGCTTATG...TAAGCTCCCGGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGCAATTCACATGTTCATaGCTGATAGCAGGTAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKQFTCS*LIAGSP Trigger: GGGGCTACCTGCTATCAGGCATGAACATGTGAATTG...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGACACATGCCCCATGTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCAGCTCATTTCTAGTGTaGAATTTAAGTCCCGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: GRHMPHVSPNKKAGFLPFSSFLV*NLSPGW Trigger: CCAACCGGGACTTAAATTTCACACTAGAAATGAGCT...GAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGACATGGGGCATGTGTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGACACATGCCCCATGTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCGTACCTGTCATTCACTaGAGGATGAACTCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GRHMPHVSPNKKAGFLPFVPVIH*RMNSEK Trigger: TTTCTCTGAGTTCATCCTGCAGTGAATGACAGGTAC...GAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGACATGGGGCATGTGTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGTCAAAACTGAAACACTaGGCCAACAAGACAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKSKLKH*ANKTAG Trigger: ACCTGCTGTCTTGTTGGCCCAGTGTTTCAGTTTTGA...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGAACCTGATAGCCTTGAATTCTaGTCCTCCAGCCTTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: THTAEQRSLGLQITSKEPDSLEF*SSSLLQ Trigger: TTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATC...AGGTTCCTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCATACCACCTACTAACCAGCAATTCACATGTTCATGCCTGATAGCAGGTGTGTTTCCCATTCACTaGGTTAAGACTGGAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QGIPPTNQQFTCSCLIAGVFPIH*VKTGAH Trigger: ATGAGCTCCAGTCTTAACTCAGTGAATGGGAAACAC...ACCTGCTATCAGGCATGAACATGTGAATTGCTGGTTAGTAGGTGGTATGCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGGCCTTTCTGGGCTTTTaGCTGGCTGACTCACACAGC | + |
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Preference number: 2 (lower is better) Translates to: THNTNSYSVGTNQGTESKAFLGF*LADSHS Trigger: GCTGTGTGAGTCAGCCAGTCAAAAGCCCAGAAAGGC...CTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAATTCTGGGCTTTTGACTaGCTGACTCACACAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ITSAIAMLLHQDGERDVKFWAFD*LTHTAE Trigger: CTCTGCTGTGTGAGTCAGCCAGTCAAAAGCCCAGAA...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGTTTCTGGATTCCCCTaGGTTTATTATTCCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKVSGFP*VYYSMA Trigger: AGCCATGGAATAATAAACCCAGGGGAATCCAGAAAC...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCGGGAGCTTATGCAGACCTGTTGTTTaGATGCATCTTTTGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CTQHLNIPITATLLSGSLCRPVV*MHLLKR Trigger: CCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCA...TAAGCTCCCGGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGAACCTACACAAGTTGATGACTaGGCAGGAATACAGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: THTAEQRSLGLQITSKEPTQVDD*AGIQTH Trigger: ATGAGTCTGTATTCCTGCTCAGTCATCAACTTGTGT...AGGTTCCTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGCCTTTCTGGGCTTTTaGCTGGCTGACTCACACAGC | + |
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Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEEAFLGF*LADSHS Trigger: GCTGTGTGAGTCAGCCAGTCAAAAGCCCAGAAAGGC...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGAGAGAAGGGATGATTaGAAAGGGAATCATATCTTC | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKERRDD*KGNHIF Trigger: GAAGATATGATTCCCTTTCCAATCATCCCTTCTCTC...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAGGGTTTTTGCCTTTCTaGGCTTTTGACTGGCTGACT | + |
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Preference number: 2 (lower is better) Translates to: ITSAIAMLLHQDGERDVKGFLPF*AFDWLT Trigger: AGTCAGCCAGTCAAAAGCCCAGAAAGGCAAAAACCC...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACAGGGTTTTTGCCTTTCTaGGCTTTTGACTGGCTGACT | + |
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Preference number: 2 (lower is better) Translates to: SVVSGFPWVYYSMASDMTGFLPF*AFDWLT Trigger: AGTCAGCCAGTCAAAAGCCCAGAAAGGCAAAAACCC...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCCACACTGAGAACAACTaGCTATTGGCAGACACATGC | + |
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Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSHTENN*LLADTC Trigger: GCATGTGTCTGCCAATAGCCAGTTGTTCTCAGTGTG...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTAGCTCATTTCTAGTGTaGAATTTAAGTCCCGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: GNKPACRLMIDRTSNEILSSFLV*NLSPGW Trigger: CCAACCGGGACTTAAATTTCACACTAGAAATGAGCT...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCCCATGGCTTCTGATATaGCAAACAGGCTATTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSPWLLI*QTGYLH Trigger: GTGCAAATAGCCTGTTTGTCATATCAGAAGCCATGG...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCTCCAAACAAGAAAGCTaGGTTTTTGCCTTTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSSKQES*VFAFLG Trigger: GCCCAGAAAGGCAAAAACCCAGCTTTCTTGTTTGGA...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGTCTCTAATATGTAATTaGCACACACAGAGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: WLTHTAEQRSLGLQITSKSLICN*HTQRRK Trigger: CTTTCTCCTCTGTGTGTGCCAATTACATATTAGAGA...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR CAA 90 bp | TTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTaGAAGAGGCTGGAAAGGGCAGGCACAAGATTAAATGGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: LRHYIKCRPVVWMHL*KRLERAGTRLNGMM Trigger: CATCATGCCATTTAATCTTGTGCCTGCCCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACAACACAAGTTGATGACTaGGCAGGAATACAGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: SVVSGFPWVYYSMASDMTTQVDD*AGIQTH Trigger: ATGAGTCTGTATTCCTGCTCAGTCATCAACTTGTGT...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCATACCACCTACTAACCAGCAATTCACATGTTCATGCCTGATAGCAGGTTCTGTCCCTTCTAGGTaGAACTTTTCTAGTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: QGIPPTNQQFTCSCLIAGSVPSR*NFSSLM Trigger: CATTAAACTAGAAAAGTTGCACCTAGAAGGGACAGA...ACCTGCTATCAGGCATGAACATGTGAATTGCTGGTTAGTAGGTGGTATGCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCGTTTCTGGATTCCCCTaGGTTTATTATTCCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSVSGFP*VYYSMA Trigger: AGCCATGGAATAATAAACCCAGGGGAATCCAGAAAC...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGTTGTTTCTTCTGCTCTaGGGCACAACTGGATCTAGC | + |
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Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEELFLLL*GTTGSS Trigger: GCTAGATCCAGTTGTGCCTCAGAGCAGAAGAAACAA...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGCATAAGCTAGGTAAGTaGCTCACACCAGAGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEEHKLGK*LTPELH Trigger: ATGCAGCTCTGGTGTGAGTCACTTACCTAGCTTATG...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCCTTCCAGTCCCAAGATaGTTCCTACAGCAATTAATA | + |
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Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSLPVPR*FLQQLI Trigger: TATTAATTGCTGTAGGAAGCATCTTGGGACTGGAAG...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACAAGAGCAAAGGTCTCTTaGCCTTCAAATAACTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SVVSGFPWVYYSMASDMTRAKVS*PSNNFQ Trigger: TTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCT...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACAACTAAGTGTGGTTTCTaGATTCCCCTGGGTTTATTA | + |
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Preference number: 2 (lower is better) Translates to: SVVSGFPWVYYSMASDMTTKCGF*IPLGLL Trigger: TAATAAACCCAGGGGAATCCAGAAACCACACTTAGT...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAACTAAGTGTGGTTTCTaGATTCCCCTGGGTTTATTA | + |
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Preference number: 2 (lower is better) Translates to: ITSAIAMLLHQDGERDVKTKCGF*IPLGLL Trigger: TAATAAACCCAGGGGAATCCAGAAACCACACTTAGT...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAAGACTTCGTATATGTTaGCAAGTATACTTTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ITSAIAMLLHQDGERDVKRLRIC*QVYFGC Trigger: ACAGCCAAAGTATACTTGTCAACATATACGAAGTCT...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTAAACTACATAGTGCACACTaGGAACAACTGGCTATTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TIQTLIQLGQTKVLSQSKLHSAH*EQLAIG Trigger: GCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAG...TTTACTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTTTCTTGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCCTTAAGTTTAGGATTTaGAGCAGACTATTTCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: LFSCTQHLNIPITATLLSLKFRI*SRLFLL Trigger: GAGTAGAAATAGTCTGCTGCAAATCCTAAACTTAAG...GGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCAAGAAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CCA 90 bp | TACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGCTGGAAAGGCCCACACACTGTATGTaGGTATACATAAAACATATT | + |
|
Preference number: 2 (lower is better) Translates to: YIKCRPVVWMHLLKRLERPTHCM*VYIKHI Trigger: AATATGTTTTATGTATACCCACATACAGTGTGTGGG...CCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGCTTCCAGTCCCAAGATaGTTCCTACAGCAATTAATA | + |
|
Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEELPVPR*FLQQLI Trigger: TATTAATTGCTGTAGGAAGCATCTTGGGACTGGAAG...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGTCTGTCCCTTCTAGGTaGAACTTTTCTAGTTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEESVPSR*NFSSLM Trigger: CATTAAACTAGAAAAGTTGCACCTAGAAGGGACAGA...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTAAATCTGTAAAGAACTTTTaGTTTTTCCTTGAGACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TIQTLIQLGQTKVLSQSKSVKNF*FFLETG Trigger: CCCTGTCTCAAGGAAAAATCAAAAGTTCTTTACAGA...TTTACTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGCTTAAGTTTAGGATTTaGAGCAGACTATTTCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: IKALHQMQTCCLDASFEELKFRI*SRLFLL Trigger: GAGTAGAAATAGTCTGCTGCAAATCCTAAACTTAAG...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCCCTGCGCACAGGAGCAGTGAGGAGACTGATGGATGCCGAGGAGGTTCCTGTTGACAAGTATACTTaGGCTGTAATCCCACACACT | + |
|
Preference number: 3 (lower is better) Translates to: TALRTGAVRRLMDAEEVPVDKYT*AVIPHT Trigger: AGTGTGTGGGATTACAGCCAAAGTATACTTGTCAAC...AGGAACCTCCTCGGCATCCATCAGTCTCCTCACTGCTCCTGTGCGCAGGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR TCA 72 bp | GATGCCGAGGAGGTTCCTGATGAGGGCAGTGGCTGCTaGGTACTCTTCCATCTTGGACTGCAGTTAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: DAEEVPDEGSGC*VLFHLGLQLVL Trigger: AAGTACTAACTGCAGTCCAAGATGGAAGAGTACTCAGCAGCCACTGCCCTCATCAGGAACCTCCTCGGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR TCA 72 bp | AGCCTAACTGGACTGCAGCACGGCTATCCTGGAAACTaGCGCCCGCACGCACACATCTGTAAAGAACTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTGLQHGYPGN*RPHAHICKELL Trigger: CAAAAGTTCTTTACAGATGTGTGCGTGCGGGCGTCAGTTTCCAGGATAGCCGTGCTGCAGTCCAGTTAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| 3UTR GCA 72 bp | GGCATACCACCTACTAACCAGCAATTCACATGTTCATaGCTGATAGCAGGTAGCCCCACCCTCTGTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GIPPTNQQFTCS*LIAGSPTLCPF Trigger: GAAGGGACAGAGGGTGGGGCTACCTGCTATCAGGCATGAACATGTGAATTGCTGGTTAGTAGGTGGTATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR TCA 72 bp | GGTCAAGTAGTGGATGGGGACCTACATAGTGCACACTaGGAACAACTGGCTATTGGCAGACACATGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GQVVDGDLHSAH*EQLAIGRHMPH Trigger: ATGGGGCATGTGTCTGCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAGGTCCCCATCCACTACTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | TGGATGGGGACCTACATAGTGCACACTGAGAACAACTaGCTATTGGCAGACACATGCCCCATGTCTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WMGTYIVHTENN*LLADTCPMSLQ Trigger: TTGGAGAGACATGGGGCATGTGTCTGCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAGGTCCCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | CAAATTCACTGTGTAGCCAAGGATAGCCTTGAATTCTaGTCCTCCAGCCTTCTCCAAGTGCTGGGACTACCG | + |
|
Preference number: 3 (lower is better) Translates to: QIHCVAKDSLEF*SSSLLQVLGLP Trigger: CGGTAGTCCCAGCACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATCCTTGGCTACACAGTGAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | GTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCTaGGCTTTTGACTGGCTGACTCACACAGCAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSPNKKAGFLPF*AFDWLTHTAEQ Trigger: TTGCTCTGCTGTGTGAGTCAGCCAGTCAAAAGCCCAGAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | GCCTTGAATTCTGGTCCTCCAGCCTTCTCCAAGTGCTaGGACTACCGGCATCCATCATATCTGATTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: ALNSGPPAFSKC*DYRHPSYLIRF Trigger: AAATCTAATCAGATATGATGGATGCCGGTAGTCCCAGCACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGACACATGCCCCATGTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCTTAGAAATGCCAAATTaGGTGGTTCTGGGGTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRHMPHVSPNKKAGFLPFLEMPN*VVLGLR Trigger: CCTCAACCCCAGAACCACCAAATTTGGCATTTCTAA...GAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGACATGGGGCATGTGTCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGACACATGCCCCATGTCTCTCCAAACAAGAAAGCTGGGTTTTTGCCTTTCAAATTTAAGTCCCGGTaGGATGAGATGTCCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRHMPHVSPNKKAGFLPFKFKSR*DEMSLS Trigger: ACTTAGGGACATCTCATCCAACCGGGACTTAAATTT...GAAAGGCAAAAACCCAGCTTTCTTGTTTGGAGAGACATGGGGCATGTGTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | GATTTTTCCTTGAGACAGGGTCTCATGAGCCCAAGCTaGTCTCAAATTCACTGTGTAGCCAAGGATAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DFSLRQGLMSPS*SQIHCVAKDSL Trigger: AAGGCTATCCTTGGCTACACAGTGAATTTGAGACCAGCTTGGGCTCATGAGACCCTGTCTCAAGGAAAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCATACCACCTACTAACCAGCAATTCACATGTTCATGCCTGATAGCAGGTCAAACTCTTATTCAGTaGGGACAAACCAAGGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: QGIPPTNQQFTCSCLIAGQTLIQ*GQTKVL Trigger: CAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTG...ACCTGCTATCAGGCATGAACATGTGAATTGCTGGTTAGTAGGTGGTATGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | ACAGAGGAGAAAGTACACACTTCAAAACTGAAACACTaGGCCAACAAGACAGCAGGTTTGTTTCTTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TEEKVHTSKLKH*ANKTAGLFLLL Trigger: GAGCAGAAGAAACAAACCTGCTGTCTTGTTGGCCCAGTGTTTCAGTTTTGAAGTGTGTACTTTCTCCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CCA 72 bp | CCAGGGTTACCACTAAGTGTGGTTTCTGGATTCCCCTaGGTTTATTATTCCATGGCTTCTGATATGACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGLPLSVVSGFP*VYYSMASDMTN Trigger: GTTTGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACTTAGTGGTAACCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAAAGAAAGCTGGGTTTTaGCCTTTCTGGGCTTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ITSAIAMLLHQDGERDVKKKAGF*PFWAFD Trigger: GTCAAAAGCCCAGAAAGGCAAAAACCCAGCTTTCTT...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTATTGAGAAAGGGGTCTaGGCCACTGTAATCTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: GNKPACRLMIDRTSNEILIEKGV*ATVIYV Trigger: TACATAGATTACAGTGGCCAAGACCCCTTTCTCAAT...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTTTTATAGCAGCTCATTaGGAGATTCTAGAGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GNKPACRLMIDRTSNEILFIAAH*EILEST Trigger: GGTGCTCTCTAGAATCTCCAAATGAGCTGCTATAAA...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACAAAATTTAAGTCCCGGTaGGATGAGATGTCCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVVSGFPWVYYSMASDMTKFKSR*DEMSLS Trigger: ACTTAGGGACATCTCATCCAACCGGGACTTAAATTT...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGCTGGAAAGGTTTATAGCAGCTCATTaGGAGATTCTAGAGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: YIKCRPVVWMHLLKRLERFIAAH*EILEST Trigger: GGTGCTCTCTAGAATCTCCAAATGAGCTGCTATAAA...CCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTTAGAAATGCCAAATTaGGTGGTTCTGGGGTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: THNTNSYSVGTNQGTESKLEMPN*VVLGLR Trigger: CCTCAACCCCAGAACCACCAAATTTGGCATTTCTAA...CTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAGGCATTACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGTTTGGATGCATCTTTaGAAGAGGCTGGAAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IKALHQMQTCCLDASFEEVWMHL*KRLERA Trigger: TGCCCTTTCCAGCCTCTTCAAAAGATGCATCCAAAC...CTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTAATGCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTAAAAAGAAAGCTGGGTTTTaGCCTTTCTGGGCTTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TIQTLIQLGQTKVLSQSKKKAGF*PFWAFD Trigger: GTCAAAAGCCCAGAAAGGCAAAAACCCAGCTTTCTT...TTTACTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTGTCCTGTTTTTGTTTaGATTGGCAAGTTCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: THNTNSYSVGTNQGTESKCPVFV*IGKFIL Trigger: CAGAATGAACTTGCCAATCAAAACAAAAACAGGACA...CTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATATGTTGACAAGTATACTTTGGCTGTAATCCCACACACTGTATGTGGGTATTGTCCTGTTTTTGTTTaGATTGGCAAGTTCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VYVDKYTLAVIPHTVCGYCPVFV*IGKFIL Trigger: CAGAATGAACTTGCCAATCAAAACAAAAACAGGACA...ATACCCACATACAGTGTGTGGGATTACAGCCAAAGTATACTTGTCAACATATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCATACCACCTACTAACCAGCAATTCACATGTTCATGCCTGATAGCAGGTCGGGTGGTGGTGAGGTaGCATGGTAATGTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGIPPTNQQFTCSCLIAGRVVVR*HGNVVV Trigger: GACGACAACATTACCATGCCACCTCACCACCACCCG...ACCTGCTATCAGGCATGAACATGTGAATTGCTGGTTAGTAGGTGGTATGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CAA 72 bp | GGGACCTACATAGTGCACACTGAGAACAACTGGCTATaGGCAGACACATGCCCCATGTCTCTCCAAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTYIVHTENNWL*ADTCPMSLQTR Trigger: TCTTGTTTGGAGAGACATGGGGCATGTGTCTGCCAATAGCCAGTTGTTCTCAGTGTGCACTATGTAGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTGTAGCCAAGGATAGCCTTGAATTCTGGTCCTCCAGCCTTCTCCAAGTGCCTCTCGGGCTATCTTaGGTCCTTCATAAAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HCVAKDSLEFWSSSLLQVPLGLS*VLHKTL Trigger: CAATGTTTTATGAAGGACTCAAGATAGCCCGAGAGG...CACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATCCTTGGCTACACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
||
| CDS-3UTR GCA 90 bp | TGCACACAACACTTAAACATTCCCATTACAGCAACCCTGCTCTCCGGGAGCTTAAAGCTCAGCATCTGCTaGCCAACAGTTTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQHLNIPITATLLSGSLKLSIC*PTVLCV Trigger: GACACACAAAACTGTTGGGCAGCAGATGCTGAGCTT...TAAGCTCCCGGAGAGCAGGGTTGCTGTAATGGGAATGTTTAAGTGTTGTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084526.12 |
||
| CDS-3UTR GCA 90 bp | ACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGAACCTGGGAAGCTCAGCATCTaGTGCCCAACAGTTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THTAEQRSLGLQITSKEPGKLSI*CPTVLC Trigger: ACACAAAACTGTTGGGCAGCAGATGCTGAGCTTCCC...AGGTTCCTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084526.12 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGATGTTGTCGTCCGTGTaGTTCATACCCATATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTHTAEQRSLGLQITSKMLSSV*FIPIWW Trigger: CCACCATATGGGTATGAACCACACGGACGACAACAT...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGCCTCTCGGGCTATCTTaGGTCCTTCATAAAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTHTAEQRSLGLQITSKPLGLS*VLHKTL Trigger: CAATGTTTTATGAAGGACTCAAGATAGCCCGAGAGG...CTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR CCA 90 bp | TACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGCTGGAAAGGATGTTGTCGTCCGTGTaGTTCATACCCATATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIKCRPVVWMHLLKRLERMLSSV*FIPIWW Trigger: CCACCATATGGGTATGAACCACACGGACGACAACAT...CCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CAA 72 bp | CTGGAGCTCATTTCTAGTGTGAAATTTAAGTCCCGGTaGGATGAGATGTCCCTAAGTGCCATCAATCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LELISSVKFKSR*DEMSLSAINPV Trigger: AACAGGATTGATGGCACTTAGGGACATCTCATCCAACCGGGACTTAAATTTCACACTAGAAATGAGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACAAGCCTGCATGTAGATTAATGATTGACAGGACGTCCAATGAGATCCTTAATTGTAGCGAATGCTaGCTTGAGACTTTCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKPACRLMIDRTSNEILNCSEC*LETFEA Trigger: TGCTTCGAAAGTCTCAAGTCAGCATTCGCTACAATT...AAGGATCTCATTGGACGTCCTGTCAATCATTAATCTACATGCAGGCTTGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR CCA 90 bp | TACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTTGAAGAGGCTGGAAAGGTGGTGCATCTCCATATaGTTCATCCCCATATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIKCRPVVWMHLLKRLERWCISI*FIPIWF Trigger: GAACCATATGGGGATGAACCATATGGAGATGCACCA...CCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| 3UTR CAA 72 bp | TACATCAAATGCAGACCTGTTGTTTGGATGCATCTTTaGAAGAGGCTGGAAAGGGCAGGCACAAGATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIKCRPVVWMHL*KRLERAGTRLN Trigger: ATTTAATCTTGTGCCTGCCCTTTCCAGCCTCTTCAAAAGATGCATCCAAACAACAGGTCTGCATTTGATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
||
| CDS-3UTR TCA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAATTTCTCCAGGTGTATTaGTTACCAAACCGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: ITSAIAMLLHQDGERDVKFLQVY*LPNRKT Trigger: TGTTTTCCGGTTTGGTAATCAATACACCTGGAGAAA...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR TCA 90 bp | AGTGTGGTTTCTGGATTCCCCTGGGTTTATTATTCCATGGCTTCTGATATGACATTTCTCCAGGTGTATTaGTTACCAAACCGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: SVVSGFPWVYYSMASDMTFLQVY*LPNRKT Trigger: TGTTTTCCGGTTTGGTAATCAATACACCTGGAGAAA...TGTCATATCAGAAGCCATGGAATAATAAACCCAGGGGAATCCAGAAACCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR CCA 90 bp | ACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTAAATGGTGCATCTCCATATaGTTCATCCCCATATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: TIQTLIQLGQTKVLSQSKWCISI*FIPIWF Trigger: GAACCATATGGGGATGAACCATATGGAGATGCACCA...TTTACTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR CAA 90 bp | CACTGTGTAGCCAAGGATAGCCTTGAATTCTGGTCCTCCAGCCTTCTCCAAGTGATTTCTCCAGGTGTATaGATTACCAAACCGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: HCVAKDSLEFWSSSLLQVISPGV*ITKPEN Trigger: GTTTTCCGGTTTGGTAATCAATACACCTGGAGAAAT...CACTTGGAGAAGGCTGGAGGACCAGAATTCAAGGCTATCCTTGGCTACACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122092.2 |
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| CDS-3UTR CAA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAGTAGCGAATGCTGACTaGAGACTTTCGAAGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: ITSAIAMLLHQDGERDVKVANAD*RLSKQT Trigger: GGTCTGCTTCGAAAGTCTCAAGTCAGCATTCGCTAC...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR CAA 90 bp | ACTCACACAGCAGAGCAAAGGTCTCTTGGCCTTCAAATAACTTCCAAGGAACCTGTCCTTCATAAAACATaGCTAGTAAAAACACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: THTAEQRSLGLQITSKEPVLHKT*LVKTLP Trigger: TGGCAGTGTTTTTACTAGCAATGTTTTATGAAGGAC...AGGTTCCTTGGAAGTTATTTGAAGGCCAAGAGACCTTTGCTCTGCTGTGTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR CAA 90 bp | ATAACCTCAGCAATAGCCATGCTACTGCATCAGGATGGTGAGAGAGATGTTAAAGTCCTTCATAAAACATaGCTAGTAAAAACACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ITSAIAMLLHQDGERDVKVLHKT*LVKTLP Trigger: TGGCAGTGTTTTTACTAGCAATGTTTTATGAAGGAC...TTTAACATCTCTCTCACCATCCTGATGCAGTAGCATGGCTATTGCTGAGGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS-3UTR CAA 90 bp | ACAATACAAACTCTTATTCAGTTGGGACAAACCAAGGTACTGAGTCAAAGTAAAATTTCTCCAGGTGTATaGATTACCAAACCGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: TIQTLIQLGQTKVLSQSKISPGV*ITKPEN Trigger: GTTTTCCGGTTTGGTAATCAATACACCTGGAGAAAT...TTTACTTTGACTCAGTACCTTGGTTTGTCCCAACTGAATAAGAGTTTGTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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| CDS CCA 72 bp | GTAATGTTGTCGTCCGTGTGGTTCATACCCATATGGTaGTGCATCTCCATATGGTTCATCCCCATATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VMLSSVWFIPIW*CISIWFIPIWF Trigger: GAACCATATGGGGATGAACCATATGGAGATGCACCACCATATGGGTATGAACCACACGGACGACAACATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084526.12 ENSMUST00000122092.2 |
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