Pregenerated sensors for SLC30A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024069Ensembl transcript IDs: ENSMUST00000024870.9, ENSMUST00000179074.9, ENSMUST00000232866.2, ENSMUST00000233042.2, ENSMUST00000233799.2, ENSMUST00000234515.2, ENSMUST00000235003.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATaGGAGTCCTTGGCTGAACACGCTGCTGTATGGTGTGTGTCCGCG | + |
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Preference number: 1 (lower is better) Translates to: WEGGPQSLACSNSWK*ESLAEHAAVWCVSA Trigger: CGCGGACACACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR GCA 90 bp | ACTGCTGAGTCCTGGGATAAGGCCACACAAGCTGCGGCTAAGGTCTaGCACGTGCTCCTGAAGCCAGCTCGTACTAGCAGCTTCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: TAESWDKATQAAAKV*HVLLKPARTSSFRD Trigger: GTCTCTGAAGCTGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGACCTTAGCCGCAGCTTGTGTGGCCTTATCCCAGGACTCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR CCA 90 bp | GGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTCCTTaGCTGAACACGCTGCTGTATGGTGTGTGTCCGCGATTAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: GLNPWPAPTPGNASP*LNTLLYGVCPRLRP Trigger: GGGTCTTAATCGCGGACACACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 90 bp | CAGAACAAACGGATTCATGCGGGGCAGGAAGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCTGCGGCTAAGGTCTGCCACGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: QNKRIHAGQEDTAES*DKATQAAAKVCHVL Trigger: GAGCACGTGGCAGACCTTAGCCGCAGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR CCA 90 bp | TATATGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTaGAAATGCGAGTCCTTGGCTGAACACGCTGCTGTATGGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: YMWEGGPQSLACSNS*KCESLAEHAAVWCV Trigger: CACACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 90 bp | CTGTCAGGGTCTTGGCTGCCCCATCCTGTTGATTCCATATCTACTTaGTATATGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: LSGSWLPHPVDSIST*YMWEGGPQSLACSN Trigger: GTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCAAGACCCTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR GCA 90 bp | ATATCTACTTGGTATATGTGGGAAGGTGGGCCTCAATCCCTGGCCTaGTCCAACTCCTGGAAATGCGAGTCCTTGGCTGAACACGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ISTWYMWEGGPQSLA*SNSWKCESLAEHAA Trigger: AGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAGTAGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 90 bp | ATAAAGGCATTGGGATTACGTGATGGTCTGAGAAGTTTAGGACGTTaGGCGCAACAGGCCCAGAGGATAAGGCAGGCCGAATCCAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: IKALGLRDGLRSLGR*AQQAQRIRQAESSR Trigger: ACGACTGGATTCGGCCTGCCTTATCCTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCTCAGACCATCACGTAATCCCAATGCCTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 90 bp | ATTCCATATCTACTTGGTATATGTGGGAAGGTGGGCCTCAATCCCTaGCCTGCTCCAACTCCTGGAAATGCGAGTCCTTGGCTGAACACG | + |
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Preference number: 1 (lower is better) Translates to: IPYLLGICGKVGLNP*PAPTPGNASPWLNT Trigger: CGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAGTAGATATGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR TCA 90 bp | GGGGTCCTCTCATCCACGTTCTTTAATAAAGGCATTGGGATTACGTaGTGGTCTGAGAAGTTTAGGACGTTGGGCGCAACAGGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GVLSSTFFNKGIGIT*WSEKFRTLGATGPE Trigger: CTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCTCAGACCATCACGTAATCCCAATGCCTTTATTAAAGAACGTGGATGAGAGGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR TCA 90 bp | CACAATAAGTTAGAGTCTGTCAGGGTCTTGGCTGCCCCATCCTGTTaGTTCCATATCTACTTGGTATATGTGGGAAGGTGGGCCTCAATC | + |
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Preference number: 1 (lower is better) Translates to: HNKLESVRVLAAPSC*FHIYLVYVGRWASI Trigger: GATTGAGGCCCACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCAAGACCCTGACAGACTCTAACTTATTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 90 bp | CACGCTGCTGTATGGTGTGTGTCCGCGATTAAGACCCAAACTATATaGCCTTGTCTGTGTGTTCAGAAGAATAACCGGGCTCACGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: HAAVWCVSAIKTQTI*PCLCVQKNNRAHVF Trigger: AAAAACGTGAGCCCGGTTATTCTTCTGAACACACAGACAAGGCCATATAGTTTGGGTCTTAATCGCGGACACACACCATACAGCAGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CAA 90 bp | GGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTCCTaGGCTGAACACGCTGCTGTATGGTGTGTGTCCGCGATTAAGACC | + |
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Preference number: 2 (lower is better) Translates to: GPQSLACSNSWKCES*AEHAAVWCVSAIKT Trigger: GGTCTTAATCGCGGACACACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTCCACGGCAATCTGCCACGTGCTCCTaGAGCCAGCTCGTACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: WCQTSSGQWQWLTQCPRQSATCS*SQLVLA Trigger: TGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGA...TTGCCGTGGACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGACGTCATCAGGGCAATaGCAATGGCTGACGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: MWEGGPQSLACSNSWKCETSSGQ*QWLTQC Trigger: ACACTGCGTCAGCCATTGCCATTGCCCTGATGACGT...CTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTATATGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAGAATCCAGTCGTCCTTaGAGATCTGAACAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: LGICGKVGLNPWPAPTPGESSRP*RSEQSA Trigger: CGCTGACTGTTCAGATCTTCAAGGACGACTGGATTC...TCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTATATGGCCTTGTCTGTGTGTTCAGAAGAATAACCGGGCTCACGTTTTTCGGGCTTGGCTGGGGTTaGCGTGACGGGGGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KLYGLVCVFRRITGLTFFGLGWG*RDGGPL Trigger: GAGAGGACCCCCGTCACGTCAACCCCAGCCAAGCCC...GAAAAACGTGAGCCCGGTTATTCTTCTGAACACACAGACAAGGCCATATAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCAAGGTAGACACCTGGAGGAGCACTTTCCCACTGTACACACTCATGGGGGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSKVDTWRSTFPLYTLMGDTAES*DKATQA Trigger: AGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATC...CCCCATGAGTGTGTACAGTGGGAAAGTGCTCCTCCAGGTGTCTACCTTGGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234515.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTACTTGGTATATGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCACTGTACACACTCATaGGGTACATGGTGCCAAACG | + |
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Preference number: 2 (lower is better) Translates to: IYLVYVGRWASIPGLLQLHCTHS*GTWCQT Trigger: CGTTTGGCACCATGTACCCCATGAGTGTGTACAGTG...GAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAGTAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCATGCGGGGGAACAAACGGATTCATaGGGGGCAGGAAGATACTGC | + |
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Preference number: 2 (lower is better) Translates to: TQSKRPSKINQNKRIHAGEQTDS*GAGRYC Trigger: GCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTC...CCCCGCATGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCTCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATACACAGAGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCATGTCTGCCACGTGCTCCTaGAGCCAGCTCGTACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: VIHRANAPARSIRTNGFMSATCS*SQLVLA Trigger: TGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGA...CATGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCTCTGTGTATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCTGAACAGTCAGCGTaGACACCAGCGTGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKSEQSA*TPACTA Trigger: GGCTGTGCACGCTGGTGTCCACGCTGACTGTTCAGA...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCATCCACGTTCTTTAATAAAGGCATTGGGATTACGTGATGGTCTGAGAAGTGAACAAACGGATTCATaGGGGGCAGGAAGATACTGC | + |
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Preference number: 2 (lower is better) Translates to: SHPRSLIKALGLRDGLRSEQTDS*GAGRYC Trigger: GCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTC...ACTTCTCAGACCATCACGTAATCCCAATGCCTTTATTAAAGAACGTGGATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234515.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCCAAGGTAGACACCTaGAGGAGCACTTTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKSKVDT*RSTFPL Trigger: CAGTGGGAAAGTGCTCCTCCAGGTGTCTACCTTGGA...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234515.2 |
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| 3UTR CAA 90 bp | CTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACTTTTaGAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSHHRLLQSSSYPNF*KEAYLMPMTFPKTS Trigger: TGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCAATCTGACATGTAAGTaGTTGAACAGTCAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLQSSSYPNFLKEAYLMPNLTCK*LNSQCK Trigger: CTTGCATTGACTGTTCAACCACTTACATGTCAGATT...GGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| 3UTR-3UTR CCA 90 bp | AAATATGAACAAGCCTGGAATAATCTGACATGTAAGTGGTTGAACAGTCAATGCACCGATAACATGAGGTaGTGTTGTCTGGAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KYEQAWNNLTCKWLNSQCTDNMR*CCLEEH Trigger: GTGCTCCTCCAGACAACACCACCTCATGTTATCGGT...GCATTGACTGTTCAACCACTTACATGTCAGATTATTCCAGGCTTGTTCATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235003.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCAGAAGAATAACCGGGCTCACGTTTTTCCCAGGCGTATTAAATGAAAACAATCTGACATGTAAGTaGTTGAACAGTCAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VFRRITGLTFFPGVLNENNLTCK*LNSQCK Trigger: CTTGCATTGACTGTTCAACCACTTACATGTCAGATT...GTTTTCATTTAATACGCCTGGGAAAAACGTGAGCCCGGTTATTCTTCTGAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCAAATGGACACCTAAGTTTCATTTACTTAGTTGGGCACCATACATGAAGTTCCAAAGACCTCACTaGCACAAGAACATTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: LFKWTPKFHLLSWAPYMKFQRPH*HKNILQ Trigger: TTGTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAA...CTTCATGTATGGTGCCCAACTAAGTAAATGAAACTTAGGTGTCCATTTGAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| 3UTR-3UTR CCA 90 bp | AAATATGAACAAGCCTGGAATAATCTGACATGTAAGTGGTTGAACAGTCAATGCAATCTGACATGTAAGTaGTTGAACAGTCAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KYEQAWNNLTCKWLNSQCNLTCK*LNSQCK Trigger: CTTGCATTGACTGTTCAACCACTTACATGTCAGATT...GCATTGACTGTTCAACCACTTACATGTCAGATTATTCCAGGCTTGTTCATATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTGGTGGGCTGCTGGGCTaGGCTGGGGTTGACGTGACG | + |
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Preference number: 3 (lower is better) Translates to: CGKVGLNPWPAPTPGNASGGLLG*AGVDVT Trigger: CGTCACGTCAACCCCAGCCAAGCCCAGCAGCCCACC...ACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR TCA 72 bp | CCGGAGGTGGGCTGCTGGGCTTGGCTGGGGTTGACGTaGCGGGGGTCCTCTCATCCACGTTCTTTAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: PEVGCWAWLGLT*RGSSHPRSLIK Trigger: CTTTATTAAAGAACGTGGATGAGAGGACCCCCGTCACGTCAACCCCAGCCAAGCCCAGCAGCCCACCTCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR GCA 72 bp | TCCTGGGATAAGGCCACACAAGCTGCGGCTAAGGTCTaGCACGTGCTCCTGAAGCCAGCTCGTACTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SWDKATQAAAKV*HVLLKPARTSS Trigger: GCTGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGACCTTAGCCGCAGCTTGTGTGGCCTTATCCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR CCA 72 bp | CCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTCCTTaGCTGAACACGCTGCTGTATGGTGTGTGTCCGCGA | + |
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Preference number: 3 (lower is better) Translates to: PWPAPTPGNASP*LNTLLYGVCPR Trigger: TCGCGGACACACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR GCA 72 bp | GGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATaGGAGTCCTTGGCTGAACACGCTGCTGTATGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GPQSLACSNSWK*ESLAEHAAVWC Trigger: ACACCATACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 72 bp | CGGATTCATGCGGGGCAGGAAGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCTGCGGCTAAGGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: RIHAGQEDTAES*DKATQAAAKVC Trigger: GCAGACCTTAGCCGCAGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATCTTCCTGCCCCGCATGAATCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR CCA 72 bp | GAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTaGAAATGCGAGTCCTTGGCTGAACACGCTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: EGGPQSLACSNS*KCESLAEHAAV Trigger: TACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR TCA 72 bp | AATAACCGGGCTCACGTTTTTCCCAGGCGTATTAAATaGAAACTCCGGAGGTGGGCTGCTGGGCTTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: NNRAHVFPRRIK*KLRRWAAGLGW Trigger: CCAGCCAAGCCCAGCAGCCCACCTCCGGAGTTTTCATTTAATACGCCTGGGAAAAACGTGAGCCCGGTTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 72 bp | TTGGGATTACGTGATGGTCTGAGAAGTTTAGGACGTTaGGCGCAACAGGCCCAGAGGATAAGGCAGGCCGAA | + |
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Preference number: 3 (lower is better) Translates to: LGLRDGLRSLGR*AQQAQRIRQAE Trigger: TTCGGCCTGCCTTATCCTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCTCAGACCATCACGTAATCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR CCA 72 bp | TCTTGGCTGCCCCATCCTGTTGATTCCATATCTACTTaGTATATGTGGGAAGGTGGGCCTCAATCCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SWLPHPVDSIST*YMWEGGPQSLA Trigger: GGCCAGGGATTGAGGCCCACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTA | + |
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Preference number: 3 (lower is better) Translates to: CGKVGLNPWPAPTPGNASGLLNT*EGKKSL Trigger: TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCC...ACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTCCACGGCAAGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTA | + |
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Preference number: 3 (lower is better) Translates to: WCQTSSGQWQWLTQCPRQGLLNT*EGKKSL Trigger: TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCC...TTGCCGTGGACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCACGTGCTCCTGAAGCCAGCTCGTACTAGCAGCTTCAGAGACGTAAGCAAAAGCATCGTGAACAGGTaGAAAGAAAGGGCCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: CHVLLKPARTSSFRDVSKSIVNR*KERATK Trigger: TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCT...TTTGCTTACGTCTCTGAAGCTGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGTATGGTGTGTGTCCGCGATTAAGACCCAAACTATATGGCCTTGTCTGATGAGCAAGGACCATTaGTTCGTTCGCATCTCGTCG | + |
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Preference number: 3 (lower is better) Translates to: AAVWCVSAIKTQTIWPCLMSKDH*FVRISS Trigger: CGACGAGATGCGAACGAACAAATGGTCCTTGCTCAT...CAGACAAGGCCATATAGTTTGGGTCTTAATCGCGGACACACACCATACAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| 3UTR TCA 72 bp | GGCATGTGGGAGACTGAGGCAGAAGGATTATGGGTTTaGAGCCAGCCTGATCTATGCAGCAAAACCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GMWETEAEGLWV*SQPDLCSKTCF Trigger: GAAACAGGTTTTGCTGCATAGATCAGGCTGGCTTCAAACCCATAATCCTTCTGCCTCAGTCTCCCACATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024870.9 |
||
| 3UTR TCA 72 bp | TTAGAGTCTGTCAGGGTCTTGGCTGCCCCATCCTGTTaGTTCCATATCTACTTGGTATATGTGGGAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LESVRVLAAPSC*FHIYLVYVGRW Trigger: CCACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCAAGACCCTGACAGACTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GKMQIHSAHGFTAGGQTIGLLNT*EGKKSL Trigger: TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCC...GATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| 3UTR CCA 72 bp | GTATGGTGTGTGTCCGCGATTAAGACCCAAACTATATaGCCTTGTCTGTGTGTTCAGAAGAATAACCGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VWCVSAIKTQTI*PCLCVQKNNRA Trigger: AGCCCGGTTATTCTTCTGAACACACAGACAAGGCCATATAGTTTGGGTCTTAATCGCGGACACACACCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR CCA 72 bp | TCTAATCAGTTTGTCCAACTGACCGATAACATGAGGTaGTGTTGTCTGGAGGAGCACTTTCCCACTGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: SNQFVQLTDNMR*CCLEEHFPTVH Trigger: GTGTACAGTGGGAAAGTGCTCCTCCAGACAACACCACCTCATGTTATCGGTCAGTTGGACAAACTGATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235003.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTATACACAGAGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCATGAGCATCGTGAACAGGTaGAAAGAAAGGGCCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIHRANAPARSIRTNGFMSIVNR*KERATK Trigger: TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCT...CATGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCTCTGTGTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
||
| 3UTR TCA 72 bp | TCATCCACGTTCTTTAATAAAGGCATTGGGATTACGTaGTGGTCTGAGAAGTTTAGGACGTTGGGCGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SSTFFNKGIGIT*WSEKFRTLGAT Trigger: TGTTGCGCCCAACGTCCTAAACTTCTCAGACCATCACGTAATCCCAATGCCTTTATTAAAGAACGTGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCGCGATTAAGACCCAAACTATATGGCCTTGTCTGTGTGTTCAGAAGAATATCTTTAATAAAGGCATaGGGATTACGTGATGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPRLRPKLYGLVCVFRRISLIKA*GLRDGL Trigger: CAGACCATCACGTAATCCCAATGCCTTTATTAAAGA...TATTCTTCTGAACACACAGACAAGGCCATATAGTTTGGGTCTTAATCGCGGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTACTGACATGTAAGTGGTaGAACAGTCAATGCAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: EQSMQVGLLNTLEGKKSLLTCKW*NSQCKL Trigger: CAACTTGCATTGACTGTTCAACCACTTACATGTCAG...TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGCTGACATGTAAGTGGTaGAACAGTCAATGCAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKLTCKW*NSQCKL Trigger: CAACTTGCATTGACTGTTCAACCACTTACATGTCAG...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCCCGGAGGTGGGCTGCTaGGCTTGGCTGGGGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GKMQIHSAHGFTAGGQTIPEVGC*AWLGLT Trigger: CGTCAACCCCAGCCAAGCCCAGCAGCCCACCTCCGG...GATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | AGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATGGGCTTGGCTGGGGTTaGCGTGACGGGGGTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCRSTQHMALLLEARLSHGLGWG*RDGGPL Trigger: GAGAGGACCCCCGTCACGTCAACCCCAGCCAAGCCC...ATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGACCGGAGGTGGGCTGCTaGGCTTGGCTGGGGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: EGGLPNAHDISKDLTATRPEVGC*AWLGLT Trigger: CGTCAACCCCAGCCAAGCCCAGCAGCCCACCTCCGG...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACTGGGCTTGGCTGGGGTTaGCGTGACGGGGGTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRPDYHIIGCYKAAHIQTGLGWG*RDGGPL Trigger: GAGAGGACCCCCGTCACGTCAACCCCAGCCAAGCCC...AGTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | CTCATGGGGTACATGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGGACCTCCGGTCAGCTaGGACAAGTCTAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMGYMVPNVIRAMAMADAGPPVS*DKSKFL Trigger: CAGGAATTTAGACTTGTCGCAGCTGACCGGAGGTCC...TGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCATGTACCCCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTCCACGGCAAGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WCQTSSGQWQWLTQCPRQVCISG*SKKRSA Trigger: TGCAGAACGCTTTTTGGAGCAGCCCGAGATACACAC...TTGCCGTGGACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCACTCCGGAGGTGGGCTaGTGGGCTTGGCTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQSSSYPNFLKEAYLMPTPEVG*WAWLGL Trigger: CAACCCCAGCCAAGCCCAGCAGCCCACCTCCGGAGT...GGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGGAAGGTGGGCCTCAATCCCTGGCCTGCTCCAACTCCTGGAAATGCGAGTGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGKVGLNPWPAPTPGNASVCISG*SKKRSF Trigger: GAAAGAACGCTTTTTGGAGCAGCCCGAGATACACAC...ACTCGCATTTCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCACCTTCCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234515.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTCCACGGCAAAGGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPNVIRAMAMADAVSTAKDTAES*DKATQA Trigger: AGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATC...CTTTGCCGTGGACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | GATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATCATAGGCCGTCGGATCCGTACATaGACTGACCCAGCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: DPLSTWLYCWRPDYHIIGRRIRT*TDPANE Trigger: CTCATTGGCTGGGTCAGTGCATGTACGGATCCGACG...GCCTATGATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGATCTGAACAGTCAGCGTaGACACCAGCGTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGGLPNAHDISKDLTATRSEQSA*TPACTA Trigger: GGCTGTGCACGCTGGTGTCCACGCTGACTGTTCAGA...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GGTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCGGACCTCCGGTCAGCTaGGACAAGTCTAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKMQIHSAHGFTAGGQTIGPPVS*DKSKFL Trigger: CAGGAATTTAGACTTGTCGCAGCTGACCGGAGGTCC...GATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCAGCGTGCACAGCCTGTTaGTCACATGAGCAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSACTAC*SHEQGP Trigger: TGGTCCTTGCTCATGTGAGCAACAGGCTGTGCACGC...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATCATAGGCACGTCATCAGGGCAATaGCAATGGCTGACGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPLSTWLYCWRPDYHIIGTSSGQ*QWLTQC Trigger: ACACTGCGTCAGCCATTGCCATTGCCCTGATGACGT...GCCTATGATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAATCTGAACAGTCAGCGTaGACACCAGCGTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWRPDYHIIGCYKAAHIQSEQSA*TPACTA Trigger: GGCTGTGCACGCTGGTGTCCACGCTGACTGTTCAGA...TTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATCATAGGCGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPLSTWLYCWRPDYHIIGVCISG*SKKRSA Trigger: TGCAGAACGCTTTTTGGAGCAGCCCGAGATACACAC...GCCTATGATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATCATAGGCGAACAAACGGATTCATaGGGGGCAGGAAGATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPLSTWLYCWRPDYHIIGEQTDS*GAGRYC Trigger: GCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTC...GCCTATGATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GGTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCGAACAAACGGATTCATaGGGGGCAGGAAGATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKMQIHSAHGFTAGGQTIEQTDS*GAGRYC Trigger: GCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTC...GATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACGCGTGCACAGCCTGTTaGTCACATGAGCAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LEARLSHHRLLQSSSYPNACTAC*SHEQGP Trigger: TGGTCCTTGCTCATGTGAGCAACAGGCTGTGCACGC...GTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACACTCATGGGGTACATaGTGCCAAACGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSHSWGT*CQTSSG Trigger: CCCTGATGACGTTTGGCACCATGTACCCCATGAGTG...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGGTGGGCCTCAATCCCTaGCCTGCTCCAACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLQSSSYPNFLKEAYLMVGLNP*PAPTPG Trigger: TCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCAC...CATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACGTATATGTGGGAAGGTaGGCCTCAATCCCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEARLSHHRLLQSSSYPNVYVGR*ASIPGL Trigger: CAGGCCAGGGATTGAGGCCCACCTTCCCACATATAC...GTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGTCTGCCACGTGCTCCTaGAGCCAGCTCGTACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLQSSSYPNFLKEAYLMSATCS*SQLVLA Trigger: TGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGA...CATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCAAGCCTGTTGCTCACATaGGCAAGGACCATTTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSSLLLT*ARTICS Trigger: CGAACAAATGGTCCTTGCTCATGTGAGCAACAGGCT...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCAGAATCCAGTCGTCCTTaGAGATCTGAACAGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSESSRP*RSEQSA Trigger: CGCTGACTGTTCAGATCTTCAAGGACGACTGGATTC...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | GATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATCATAGGCGGCATTGGGATTACGTaGTGGTCTGAGAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPLSTWLYCWRPDYHIIGGIGIT*WSEKFR Trigger: CCTAAACTTCTCAGACCATCACGTAATCCCAATGCC...GCCTATGATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCATGCGGGGCAGGAAGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRPSKINQNKRIHAGQEAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...TTCCTGCCCCGCATGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCGTCGGATCCGTACATaGACTGACCCAGCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: AATKQLISKLFEGGLPNARRIRT*TDPANE Trigger: CTCATTGGCTGGGTCAGTGCATGTACGGATCCGACG...GGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGACTCCGGAGGTGGGCTaGTGGGCTTGGCTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKTPEVG*WAWLGL Trigger: CAACCCCAGCCAAGCCCAGCAGCCCACCTCCGGAGT...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCAGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSDTAES*DKATQA Trigger: AGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATC...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGACACTGTACACACTCATaGGGTACATGGTGCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: EGGLPNAHDISKDLTATRHCTHS*GTWCQT Trigger: CGTTTGGCACCATGTACCCCATGAGTGTGTACAGTG...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCAGAAGTTTAGGACGTTaGGCGCAACAGGCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AATKQLISKLFEGGLPNARSLGR*AQQAQR Trigger: CCTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCT...GGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | AGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATGCTGCCCCATCCTGTTaGTTCCATATCTACTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCRSTQHMALLLEARLSHAAPSC*FHIYLV Trigger: TACCAAGTAGATATGGAATCAACAGGATGGGGCAGC...ATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCAGCTGCCCCATCCTGTTaGTTCCATATCTACTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRCRSTQHMALLLEARLSAAPSC*FHIYLV Trigger: TACCAAGTAGATATGGAATCAACAGGATGGGGCAGC...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | TTACTGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATGGACCTCCGGTCAGCTaGGACAAGTCTAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLEARLSHHRLLQSSSYGPPVS*DKSKFL Trigger: CAGGAATTTAGACTTGTCGCAGCTGACCGGAGGTCC...ATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGGLPNAHDISKDLTATRAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEARLSHHRLLQSSSYPAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...TGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGATCAATCAGAACAAACGGATTCATGCGGGGCAGGAAGATACTGCTGAGTGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSIRTNGFMRGRKILLSVCISG*SKKRSA Trigger: TGCAGAACGCTTTTTGGAGCAGCCCGAGATACACAC...ACTCAGCAGTATCTTCCTGCCCCGCATGAATCCGTTTGTTCTGATTGATCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232866.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACGATACTGCTGAGTCCTaGGATAAGGCCACACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEARLSHHRLLQSSSYPNDTAES*DKATQA Trigger: AGCTTGTGTGGCCTTATCCCAGGACTCAGCAGTATC...GTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGGTATATGTGGGAAGGTaGGCCTCAATCCCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLQSSSYPNFLKEAYLMVYVGR*ASIPGL Trigger: CAGGCCAGGGATTGAGGCCCACCTTCCCACATATAC...CATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | AGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATTCTACTTGGTATATGTaGGAAGGTGGGCCTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RCRSTQHMALLLEARLSHSTWYM*EGGPQS Trigger: GGATTGAGGCCCACCTTCCCACATATACCAAGTAGA...ATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| 3UTR CAA 72 bp | GTTAGAGTCTGTCAGGGTCTTGGCTGCCCCATCCTGTaGATTCCATATCTACTTGGTATATGTGGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVCQGLGCPIL*IPYLLGICGKV Trigger: CACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCAAGACCCTGACAGACTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR TCA 90 bp | TCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTATTCCCCTCTGCCACGTGCTCCTaGAGCCAGCTCGTACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMQVGLLNTLEGKKSLFPSATCS*SQLVLA Trigger: TGCTAGTACGAGCTGGCTTCAGGAGCACGTGGCAGA...GGGGAATAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGGGACCTCCGGTCAGCTaGGACAAGTCTAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLQSSSYPNFLKEAYLMGPPVS*DKSKFL Trigger: CAGGAATTTAGACTTGTCGCAGCTGACCGGAGGTCC...CATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGGTGGGCCTCAATCCCTaGCCTGCTCCAACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKVGLNP*PAPTPG Trigger: TCCAGGAGTTGGAGCAGGCCAGGGATTGAGGCCCAC...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGAGCCTGTTGCTCACATaGGCAAGGACCATTTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLLQSSSYPNFLKEAYLMSLLLT*ARTICS Trigger: CGAACAAATGGTCCTTGCTCATGTGAGCAACAGGCT...CATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | TATACACAGAGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCATGCGGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTQSKRPSKINQNKRIHAAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...CGCATGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCTCTGTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
||
| CDS-3UTR GCA 90 bp | AGAATAACCGGGCTCACGTTTTTCCCAGGCGTATTAAATGAAAACTCCGGAGGTGAGGGCTCCCAATTGTaGCAAGACAGTAGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RITGLTFFPGVLNENSGGEGSQL*QDSRSK Trigger: TTTGCTTCTACTGTCTTGGCACAATTGGGAGCCCTC...ACCTCCGGAGTTTTCATTTAATACGCCTGGGAAAAACGTGAGCCCGGTTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR CCA 90 bp | CTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTACACGTCATCAGGGCAATaGCAATGGCTGACGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNAHDISKDLTATRTFYTSSGQ*QWLTQC Trigger: ACACTGCGTCAGCCATTGCCATTGCCCTGATGACGT...GTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| 3UTR CAA 72 bp | CGGGGGTCCTCTCATCCACGTTCTTTAATAAAGGCATaGGGATTACGTGATGGTCTGAGAAGTTTAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSSHPRSLIKA*GLRDGLRSLGR Trigger: ACGTCCTAAACTTCTCAGACCATCACGTAATCCCAATGCCTTTATTAAAGAACGTGGATGAGAGGACCCCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR TCA 90 bp | GCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTGGCATTGGGATTACGTaGTGGTCTGAGAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLMPMTFPKTSLPQEHFGIGIT*WSEKFR Trigger: CCTAAACTTCTCAGACCATCACGTAATCCCAATGCC...AAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | GCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTGAGGGCTCCCAATTGTaGCAAGACAGTAGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AYLMPMTFPKTSLPQEHFEGSQL*QDSRSK Trigger: TTTGCTTCTACTGTCTTGGCACAATTGGGAGCCCTC...AAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGAGAAGTTTAGGACGTTaGGCGCAACAGGCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQSMQVGLLNTLEGKKSRSLGR*AQQAQR Trigger: CCTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCT...CGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | TTATTAATCTCAATCAGCATGTATGTTATACACAGAGCAAACGCCCCAGCAAGAGGACCTCCGGTCAGCTaGGACAAGTCTAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLISISMYVIHRANAPARGPPVS*DKSKFL Trigger: CAGGAATTTAGACTTGTCGCAGCTGACCGGAGGTCC...TCTTGCTGGGGCGTTTGCTCTGTGTATAACATACATGCTGATTGAGATTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTATACACAGAGCAAACGCCCCAGCAAGATCAATCAGAACAAACGGATTCAGAGGGCTCCCAATTGTaGCAAGACAGTAGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MLYTEQTPQQDQSEQTDSEGSQL*QDSRSK Trigger: TTTGCTTCTACTGTCTTGGCACAATTGGGAGCCCTC...TGAATCCGTTTGTTCTGATTGATCTTGCTGGGGCGTTTGCTCTGTGTATAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGCACTCATGGGGTACATaGTGCCAAACGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKHSWGT*CQTSSG Trigger: CCCTGATGACGTTTGGCACCATGTACCCCATGAGTG...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | CTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTACTCTACTTGGTATATGTaGGAAGGTGGGCCTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPNAHDISKDLTATRTFYSTWYM*EGGPQS Trigger: GGATTGAGGCCCACCTTCCCACATATACCAAGTAGA...GTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CCA 90 bp | CTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCGATTCCATATCTACTTaGTATATGTGGGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQSSSYPNFLKEAYLMPDSIST*YMWEGG Trigger: CCCACCTTCCCACATATACCAAGTAGATATGGAATC...GGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| 3UTR CAA 72 bp | CATAGGCTGCTACAAAGCAGCTCATATCCAAACTTTTaGAAGGAGGCCTACCTAATGCCCATGACATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLLQSSSYPNF*KEAYLMPMTFP Trigger: TGGAAATGTCATGGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGCCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR TCA 90 bp | CTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCAGAGATCAAAGATGGTaGGGTAAGTATAGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLQSSSYPNFLKEAYLMPRDQRW*GKYRQL Trigger: TAACTGCCTATACTTACCTCACCATCTTTGATCTCT...GGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR TCA 90 bp | TCATTTCGGACTTCTAGCACCCCATCCAAGGTAGACACCTCTCTAATCAGTTTGAGAGATCAAAGATGGTaGGGTAAGTATAGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SFRTSSTPSKVDTSLISLRDQRW*GKYRQL Trigger: TAACTGCCTATACTTACCTCACCATCTTTGATCTCT...CAAACTGATTAGAGAGGTGTCTACCTTGGATGGGGTGCTAGAAGTCCGAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | TCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTATTCCCCGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMQVGLLNTLEGKKSLFPAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...GGGGAATAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATCCACGTTCTTTAATAAAGGCATTGGGATTACGTGATGGTCTGAGAAGTGAGGGCTCCCAATTGTaGCAAGACAGTAGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHPRSLIKALGLRDGLRSEGSQL*QDSRSK Trigger: TTTGCTTCTACTGTCTTGGCACAATTGGGAGCCCTC...ACTTCTCAGACCATCACGTAATCCCAATGCCTTTATTAAAGAACGTGGATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | AAATACATTGGAAGGCAAGAAGTCGCTATTCCCCATCACAATAAGTTAGAGTCTTCCAACTCCTGGAAATaGGAGTCCTTGGCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KYIGRQEVAIPHHNKLESSNSWK*ESLAEH Trigger: GTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGA...AGACTCTAACTTATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | AAATACATTGGAAGGCAAGAAGTCGCTATTCCCCATCACAATAAGTTAGAGTCTACCGATAACATGAGGTaGTGTTGTCTGGAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYIGRQEVAIPHHNKLESTDNMR*CCLEEH Trigger: GTGCTCCTCCAGACAACACCACCTCATGTTATCGGT...AGACTCTAACTTATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGACCGATAACATGAGGTaGTGTTGTCTGGAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VEQSMQVGLLNTLEGKKSTDNMR*CCLEEH Trigger: GTGCTCCTCCAGACAACACCACCTCATGTTATCGGT...CGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | GCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTGATTCCATATCTACTTaGTATATGTGGGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYLMPMTFPKTSLPQEHFDSIST*YMWEGG Trigger: CCCACCTTCCCACATATACCAAGTAGATATGGAATC...AAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR TCA 90 bp | GCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTAGAGATCAAAGATGGTaGGGTAAGTATAGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AYLMPMTFPKTSLPQEHFRDQRW*GKYRQL Trigger: TAACTGCCTATACTTACCTCACCATCTTTGATCTCT...AAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
||
| CDS-3UTR TCA 90 bp | AAATATGAACAAGCCTGGAATAATCTGACATGTAAGTGGTTGAACAGTCAATGCGAATCCAGTCGTCCTTaGAGATCTGAACAGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KYEQAWNNLTCKWLNSQCESSRP*RSEQSA Trigger: CGCTGACTGTTCAGATCTTCAAGGACGACTGGATTC...GCATTGACTGTTCAACCACTTACATGTCAGATTATTCCAGGCTTGTTCATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | AAATACATTGGAAGGCAAGAAGTCGCTATTCCCCATCACAATAAGTTAGAGTCTGCACAGCACGTTGATTaGACCGAACAGAAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYIGRQEVAIPHHNKLESAQHVD*TEQKDL Trigger: AAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGC...AGACTCTAACTTATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | AAATACATTGGAAGGCAAGAAGTCGCTATTCCCCATCACAATAAGTTAGAGTCTGAGGGCTCCCAATTGTaGCAAGACAGTAGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYIGRQEVAIPHHNKLESEGSQL*QDSRSK Trigger: TTTGCTTCTACTGTCTTGGCACAATTGGGAGCCCTC...AGACTCTAACTTATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAAATGGACACCTAAGTTTCATTTACTTAGTTGGGCACCATACATGAAGGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFKWTPKFHLLSWAPYMKVCISG*SKKRSA Trigger: TGCAGAACGCTTTTTGGAGCAGCCCGAGATACACAC...CTTCATGTATGGTGCCCAACTAAGTAAATGAAACTTAGGTGTCCATTTGAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAAATGGACACCTAAGTTTCATTTACTTAGTTGGGCACCATACATGAAGTCCAACTCCTGGAAATaGGAGTCCTTGGCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKWTPKFHLLSWAPYMKSNSWK*ESLAEH Trigger: GTGTTCAGCCAAGGACTCGCATTTCCAGGAGTTGGA...CTTCATGTATGGTGCCCAACTAAGTAAATGAAACTTAGGTGTCCATTTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | AAATATGAACAAGCCTGGAATAATCTGACATGTAAGTGGTTGAACAGTCAATGCCACTGTACACACTCATaGGGTACATGGTGCCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: KYEQAWNNLTCKWLNSQCHCTHS*GTWCQT Trigger: CGTTTGGCACCATGTACCCCATGAGTGTGTACAGTG...GCATTGACTGTTCAACCACTTACATGTCAGATTATTCCAGGCTTGTTCATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
||
| CDS-3UTR CCA 90 bp | CTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTACAATCTGACATGTAAGTaGTTGAACAGTCAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPNAHDISKDLTATRTFYNLTCK*LNSQCK Trigger: CTTGCATTGACTGTTCAACCACTTACATGTCAGATT...GTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233042.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGAGAGATCAAAGATGGTaGGGTAAGTATAGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VVEQSMQVGLLNTLEGKKRDQRW*GKYRQL Trigger: TAACTGCCTATACTTACCTCACCATCTTTGATCTCT...CTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAACCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| 3UTR CAA 72 bp | GTTGAACAGTCAATGCAAGTTGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTATTCCCCATCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: VEQSMQVGLLNT*EGKKSLFPITI Trigger: TATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000234515.2 ENSMUST00000235003.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGTTATTAATCTCAATCAGCATGTATGTTATACACAGAGCAAACGCCCCAGAGATCAAAGATGGTaGGGTAAGTATAGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KVVINLNQHVCYTQSKRPRDQRW*GKYRQL Trigger: TAACTGCCTATACTTACCTCACCATCTTTGATCTCT...GGGGCGTTTGCTCTGTGTATAACATACATGCTGATTGAGATTAATAACTACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS GCA 90 bp | GGAGCTGCACCACATGAGCAGGAAGCCAGTGCACAGCACGTTGATTaGACCGAACAGAAGGATCTTCCAGGACCTCCGGTCAGCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GAAPHEQEASAQHVD*TEQKDLPGPPVSCD Trigger: GTCGCAGCTGACCGGAGGTCCTGGAAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGGCTTCCTGCTCATGTGGTGCAGCTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000232866.2 ENSMUST00000233042.2 ENSMUST00000233799.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTACATGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTCCAGTGCACAGCACGTaGATTGCACCGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGTWCQTSSGQWQWLTQCPVHST*IAPNRR Trigger: CCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGG...ACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCATGTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | CTCATGGGGTACATGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCACCAGTGCACAGCACGTaGATTGCACCGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMGYMVPNVIRAMAMADAPVHST*IAPNRR Trigger: CCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGG...TGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCATGTACCCCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | CTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCCGGTGGGCTGCTGGGCTaGGCTGGGGTTGACGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLQSSSYPNFLKEAYLMPGGLLG*AGVDVT Trigger: CGTCACGTCAACCCCAGCCAAGCCCAGCAGCCCACC...GGGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | TGGGGTACATGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGACGCAGTGTGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: WGTWCQTSSGQWQWLTQCVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...ACACTGCGTCAGCCATTGCCATTGCCCTGATGACGTTTGGCACCATGTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | ACACACTCATGGGGTACATGGTGCCAAACGTCATCAGGGCAATGGCAATGGCTGGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: THSWGTWCQTSSGQWQWLVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...CAGCCATTGCCATTGCCCTGATGACGTTTGGCACCATGTACCCCATGAGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGACCAGTGCACAGCACGTaGATTGCACCGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGGLPNAHDISKDLTATRPVHST*IAPNRR Trigger: CCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGG...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LLEARLSHHRLLQSSSYPVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...TGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | AAATACATTGGAAGGCAAGAAGTCGCTATTCCCCATCACAATAAGTTAGAGTCTGGTGGGCTGCTGGGCTaGGCTGGGGTTGACGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KYIGRQEVAIPHHNKLESGGLLG*AGVDVT Trigger: CGTCACGTCAACCCCAGCCAAGCCCAGCAGCCCACC...AGACTCTAACTTATTGTGATGGGGAATAGCGACTTCTTGCCTTCCAATGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | AGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATTGGAAATGCGAGTCCTaGGCTGAACACGCTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RCRSTQHMALLLEARLSHWKCES*AEHAAV Trigger: TACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCA...ATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LEARLSHHRLLQSSSYPNVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...GTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | GAACACGCTGCTGTATGGTGTGTGTCCGCGATTAAGACCCAAACTATATGGCCTAAAGAGGGCTCCCAATaGTGCCAAGACAGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EHAAVWCVSAIKTQTIWPKEGSQ*CQDSRS Trigger: GCTTCTACTGTCTTGGCACAATTGGGAGCCCTCTTT...AGGCCATATAGTTTGGGTCTTAATCGCGGACACACACCATACAGCAGCGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAATGAGCAAGGACCATTaGTTCGTTCGCATCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGGLPNAHDISKDLTATRMSKDH*FVRISS Trigger: CGACGAGATGCGAACGAACAAATGGTCCTTGCTCAT...TCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: AATKQLISKLFEGGLPNAVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...GGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | CTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTACGAGAAGTTTAGGACGTaGGGCGCAACAGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNAHDISKDLTATRTFYEKFRT*GATGPE Trigger: CTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCTC...GTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | CTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTTACCCAGTGCACAGCACGTaGATTGCACCGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPNAHDISKDLTATRTFYPVHST*IAPNRR Trigger: CCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGG...GTAAAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | GGCCTACCTAATGCCCATGACATTTCCAAAGACCTCACTGCCACAAGAACATTTAAAGAGGGCTCCCAATaGTGCCAAGACAGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLPNAHDISKDLTATRTFKEGSQ*CQDSRS Trigger: GCTTCTACTGTCTTGGCACAATTGGGAGCCCTCTTT...AAATGTTCTTGTGGCAGTGAGGTCTTTGGAAATGTCATGGGCATTAGGTAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTACAAAGCAGCTCATATCCAAACTTTTTGAAGGAGGCCTACCTAATGCCAAAGAGGGCTCCCAATaGTGCCAAGACAGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AATKQLISKLFEGGLPNAKEGSQ*CQDSRS Trigger: GCTTCTACTGTCTTGGCACAATTGGGAGCCCTCTTT...GGCATTAGGTAGGCCTCCTTCAAAAAGTTTGGATATGAGCTGCTTTGTAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | AGAATAACCGGGCTCACGTTTTTCCCAGGCGTATTAAATGAAAACTCCGGAGGTAAAGAGGGCTCCCAATaGTGCCAAGACAGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RITGLTFFPGVLNENSGGKEGSQ*CQDSRS Trigger: GCTTCTACTGTCTTGGCACAATTGGGAGCCCTCTTT...ACCTCCGGAGTTTTCATTTAATACGCCTGGGAAAAACGTGAGCCCGGTTATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGCCCCATCCTGTTGATTCCATATCTACTTGGTATATGTGGGAAGGTGGGAGCATCGTGAACAGGTaGAAAGAAAGGGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WLPHPVDSISTWYMWEGGSIVNR*KERATK Trigger: TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCT...CCCACCTTCCCACATATACCAAGTAGATATGGAATCAACAGGATGGGGCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACTATGAGCAAGGACCATTaGTTCGTTCGCATCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WRPDYHIIGCYKAAHIQTMSKDH*FVRISS Trigger: CGACGAGATGCGAACGAACAAATGGTCCTTGCTCAT...AGTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | GAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTAGAGAAGTTTAGGACGTaGGGCGCAACAGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EQSMQVGLLNTLEGKKSLEKFRT*GATGPE Trigger: CTCTGGGCCTGTTGCGCCCAACGTCCTAAACTTCTC...TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | GACGTAAGCAAAAGGCTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAAGAGTTAATGCGATGCTGTaGGTGGAGCTGCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: DVSKRLIPNRKHREQVERVNAML*VELHHM Trigger: CATGTGGTGCAGCTCCACCAACAGCATCGCATTAAC...TCTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAGCCTTTTGCTTACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| CDS-3UTR CAA 90 bp | GGCTTATTCCGAATAGAAAGCATCGTGAACAGGTTGAAAGAAAGGGCCACAAAAAAAGAGGGCTCCCAATaGTGCCAAGACAGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFRIESIVNRLKERATKKEGSQ*CQDSRS Trigger: GCTTCTACTGTCTTGGCACAATTGGGAGCCCTCTTT...TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCTTTCTATTCGGAATAAGCC 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000232866.2 ENSMUST00000234515.2 |
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| CDS-3UTR CAA 90 bp | GTAAGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCATCTTTAATAAAGGCATaGGGATTACGTGATGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRCRSTQHMALLLEARLSSLIKA*GLRDGL Trigger: CAGACCATCACGTAATCCCAATGCCTTTATTAAAGA...TGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | AGATGCAGATCCACTCAGCACATGGCTTTACTGCTGGAGGCCAGACTATCACATTCTTTAATAAAGGCATaGGGATTACGTGATGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRSTQHMALLLEARLSHSLIKA*GLRDGL Trigger: CAGACCATCACGTAATCCCAATGCCTTTATTAAAGA...ATGTGATAGTCTGGCCTCCAGCAGTAAAGCCATGTGCTGAGTGGATCTGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | TCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTATTCCCCTGGAAATGCGAGTCCTaGGCTGAACACGCTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SMQVGLLNTLEGKKSLFPWKCES*AEHAAV Trigger: TACAGCAGCGTGTTCAGCCAAGGACTCGCATTTCCA...GGGGAATAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAACTGACATGTAAGTGGTaGAACAGTCAATGCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CWRPDYHIIGCYKAAHIQLTCKW*NSQCKL Trigger: CAACTTGCATTGACTGTTCAACCACTTACATGTCAG...TTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCAAATGGACACCTAAGTTTCATTTACTTAGTTGGGCACCATACATGAAGCCAGTGCACAGCACGTaGATTGCACCGAACAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFKWTPKFHLLSWAPYMKPVHST*IAPNRR Trigger: CCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGG...CTTCATGTATGGTGCCCAACTAAGTAAATGAAACTTAGGTGTCCATTTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | TGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAACTCCAAACTATATGGCCTaGTCTGTGTGTTCAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WRPDYHIIGCYKAAHIQTPNYMA*SVCSEE Trigger: TTCTTCTGAACACACAGACAAGGCCATATAGTTTGG...AGTTTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGAGGCCAGACTATCACATCATAGGCTGCTACAAAGCAGCTCATATCCAAGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CWRPDYHIIGCYKAAHIQGLLNT*EGKKSL Trigger: TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCC...TTGGATATGAGCTGCTTTGTAGCAGCCTATGATGTGATAGTCTGGCCTCCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233042.2 |
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| CDS-3UTR CAA 90 bp | TCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTATTCCCCAGCATCGTGAACAGGTaGAAAGAAAGGGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SMQVGLLNTLEGKKSLFPSIVNR*KERATK Trigger: TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCT...GGGGAATAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | GAACAGTCAATGCAAGTTGGATTACTAAATACATTGGAAGGCAAGAAGTCGCTAAGCATCGTGAACAGGTaGAAAGAAAGGGCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EQSMQVGLLNTLEGKKSLSIVNR*KERATK Trigger: TTTTGTGGCCCTTTCTTTCAACCTGTTCACGATGCT...TAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000235003.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAATAACCGGGCTCACGTTTTTCCCAGGCGTATTAAATGAAAACTCCGGACCCTTCAATGTTTTCTaGATAATTCCAGTGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRITGLTFFPGVLNENSGPFNVF*IIPVCV Trigger: TACACACACTGGAATTATCAAGAAAACATTGAAGGG...TCCGGAGTTTTCATTTAATACGCCTGGGAAAAACGTGAGCCCGGTTATTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234515.2 |
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| CDS CAA 90 bp | TTGGTGGAGCTGCACCACATGAGCAGGAAGCCAGTGCACAGCACGTaGATTGCACCGAACAGAAGGATCTTCCAGGACCTCCGGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVELHHMSRKPVHST*IAPNRRIFQDLRSA Trigger: AGCTGACCGGAGGTCCTGGAAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGGCTTCCTGCTCATGTGGTGCAGCTCCACCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000232866.2 ENSMUST00000233042.2 ENSMUST00000233799.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS GCA 72 bp | CCACATGAGCAGGAAGCCAGTGCACAGCACGTTGATTaGACCGAACAGAAGGATCTTCCAGGACCTCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PHEQEASAQHVD*TEQKDLPGPPV Trigger: GACCGGAGGTCCTGGAAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGGCTTCCTGCTCATGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000232866.2 ENSMUST00000233042.2 ENSMUST00000233799.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS CAA 72 bp | CTGCACCACATGAGCAGGAAGCCAGTGCACAGCACGTaGATTGCACCGAACAGAAGGATCTTCCAGGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHHMSRKPVHST*IAPNRRIFQDL Trigger: GAGGTCCTGGAAGATCCTTCTGTTCGGTGCAATCAACGTGCTGTGCACTGGCTTCCTGCTCATGTGGTGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000232866.2 ENSMUST00000233042.2 ENSMUST00000233799.2 ENSMUST00000234515.2 ENSMUST00000235003.2 |
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| CDS GCA 72 bp | CCAGGGCTACACAGAGAAACCGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCACTTTCTTTTAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: PGLHRETVCISG*SKKRSALSFSI Trigger: TATACTAAAAGAAAGTGCAGAACGCTTTTTGGAGCAGCCCGAGATACACACGGTTTCTCTGTGTAGCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233799.2 |
||
| CDS GCA 72 bp | GTACCAACTAACAATCTTCCCGTGTGTATCTCGGGCTaGTCCAAAAAGCGTTCTGCACTTTCTTTTAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: VPTNNLPVCISG*SKKRSALSFSI Trigger: TATACTAAAAGAAAGTGCAGAACGCTTTTTGGAGCAGCCCGAGATACACACGGGAAGATTGTTAGTTGGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024870.9 ENSMUST00000179074.9 ENSMUST00000235003.2 |
||
| CDS CAA 72 bp | GTTGAACAGTCAATGCAAGTTGGATTACTAAATACATaGGAAGGCAAGAAGTCGCTAAAGAGATCAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VEQSMQVGLLNT*EGKKSLKRSKM Trigger: CATCTTTGATCTCTTTAGCGACTTCTTGCCTTCCAATGTATTTAGTAATCCAACTTGCATTGACTGTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233042.2 |
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