Pregenerated sensors for SLC30A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005802Ensembl transcript IDs: ENSMUST00000005952.11, ENSMUST00000099457.4
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCTTTGCAGGGCAAAGAGTTCTCACAGTTAACTGAGAGGTTGTaGCACTCACTGTGTCTCCAAAGGAGAAAGACGGAGATCTTACAG | + |
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Preference number: 1 (lower is better) Translates to: ASLQGKEFSQLTERL*HSLCLQRRKTEILQ Trigger: CTGTAAGATCTCCGTCTTTCTCCTTTGGAGACACAGTGAGTGGCACAACCTCTCAGTTAACTGTGAGAACTCTTTGCCCTGCAAAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR TCA 90 bp | ATGCTGATGAACGAGTGGTCATCAATACAGAAAACCAAACACAGCTaGAGTTACTTCAGGATCAAAATCTCTAAGAATGCTGGCTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: MLMNEWSSIQKTKHS*SYFRIKISKNAGWH Trigger: ATGCCAGCCAGCATTCTTAGAGATTTTGATCCTGAAGTAACTTCAGCTGTGTTTGGTTTTCTGTATTGATGACCACTCGTTCATCAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR GCA 90 bp | ATCGTGAATATTCATGACTTTCTCTTTAGCACAACTGCTGCCAATTaGCTTCCCTTGAGCTTGGAAATATTTATGTTGCTTCCTCAGACA | + |
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Preference number: 1 (lower is better) Translates to: IVNIHDFLFSTTAAN*LPLSLEIFMLLPQT Trigger: TGTCTGAGGAAGCAACATAAATATTTCCAAGCTCAAGGGAAGGCAATTGGCAGCAGTTGTGCTAAAGAGAAAGTCATGAATATTCACGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR CCA 90 bp | CTGTGGAAAGTTAACATAGCTGCCCGTAAGAATTACAATAGCTTCTaGTTCTGCCTGTTAAGTATGTCTTACTCAACTGCATTCTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: LWKVNIAARKNYNSF*FCLLSMSYSTAFLV Trigger: TACCAAGAATGCAGTTGAGTAAGACATACTTAACAGGCAGAACCAGAAGCTATTGTAATTCTTACGGGCAGCTATGTTAACTTTCCACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR TCA 90 bp | TGTTTTCTTAAAGAGAACACCCAATGCCTCTGTATCTTTCTATTATaGCATTACTGTAAAACTTGTAGTTCTGCAACCCATGGAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: CFLKENTQCLCIFLL*HYCKTCSSATHGEQ Trigger: CTGTTCTCCATGGGTTGCAGAACTACAAGTTTTACAGTAATGTCATAATAGAAAGATACAGAGGCATTGGGTGTTCTCTTTAAGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR TCA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGTCCACTCTGACTCTTTaGGGAGACAAGAGCCATACA | + |
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Preference number: 2 (lower is better) Translates to: LVFLSDLDCVHCGKALLKSTLTL*GDKSHT Trigger: TGTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGA...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR CAA 90 bp | TCTTTGTCTGAAATCATGCAAATATTAGTCAGAGCGGAGTCTGTCTaGGGGAGACTGGTGCTTGACATGGACACAGCTGTCAGGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSEIMQILVRAESV*GRLVLDMDTAVRDS Trigger: GGAGTCCCTGACAGCTGTGTCCATGTCAAGCACCAGTCTCCCCAAGACAGACTCCGCTCTGACTAATATTTGCATGATTTCAGACAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR CAA 90 bp | AGTGCACGATTAGCACTGCATCTCCCCAATTCAGATCCTGCTTCTTaGCAGGGCAAAGAGTTCTCACAGTTAACTGAGAGGTTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SARLALHLPNSDPAS*QGKEFSQLTERLCH Trigger: GTGGCACAACCTCTCAGTTAACTGTGAGAACTCTTTGCCCTGCAAAGAAGCAGGATCTGAATTGGGGAGATGCAGTGCTAATCGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR CAA 90 bp | CCTGCTTCTTTGCAGGGCAAAGAGTTCTCACAGTTAACTGAGAGGTaGTGCCACTCACTGTGTCTCCAAAGGAGAAAGACGGAGATCTTA | + |
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Preference number: 2 (lower is better) Translates to: PASLQGKEFSQLTER*CHSLCLQRRKTEIL Trigger: TAAGATCTCCGTCTTTCTCCTTTGGAGACACAGTGAGTGGCACAACCTCTCAGTTAACTGTGAGAACTCTTTGCCCTGCAAAGAAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCCATACAACCTGGTGTGCACATaGGAGGGTGCTATGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: LFGTELLHSDSLRRQEPYNLVCT*EGAMQT Trigger: AGTTTGCATAGCACCCTCTCATGTGCACACCAGGTT...GTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR CAA 90 bp | TTGACATGGACACAGCTGTCAGGGACTCCATTAGGTTTACATTTATaGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: LTWTQLSGTPLGLHL*LSSLYFRINKAVDP Trigger: GGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCCTGACAGCTGTGTCCATGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGAAGTGATTTTCTGGAAGATAGAATCCAAAACTCTACAGACCACTACGAGCGGAGTCTGTCTTaGGGAGACTGGTGCTTGACA | + |
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Preference number: 2 (lower is better) Translates to: KHRSDFLEDRIQNSTDHYERSLS*GDWCLT Trigger: TGTCAAGCACCAGTCTCCCCAAGACAGACTCCGCTC...GTAGTGGTCTGTAGAGTTTTGGATTCTATCTTCCAGAAAATCACTTCTGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR GCA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGCATGAGAGGGTGCTATaGAAACTATTACTAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LVFLSDLDCVHCGKALLKHERVL*KLLLTN Trigger: ATTTGTTAGTAATAGTTTGCATAGCACCCTCTCATG...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTGACTGGTGCTTGACATaGACACAGCTGTCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGDWCLT*TQLSGT Trigger: AGTCCCTGACAGCTGTGTCCATGTCAAGCACCAGTC...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACCCAATTGCCTTCCCTTaGGCTTGGAAATATTTATGT | + |
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Preference number: 2 (lower is better) Translates to: KGERRRSYSCVVPDLTADPIAFP*AWKYLC Trigger: ACATAAATATTTCCAAGCTCAAGGGAAGGCAATTGG...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR GCA 90 bp | ACTGACGGGTTGCCTAAATGGAAACACATAATACTGAGGAATTCCTACAATTTTACAACGTCTAGCCCCTaGTGCAAAAGGCAAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TDGLPKWKHIILRNSYNFTTSSP*CKRQVQ Trigger: CTGCACTTGCCTTTTGCAGCAGGGGCTAGACGTTGT...AAAATTGTAGGAATTCCTCAGTATTATGTGTTTCCATTTAGGCAACCCGTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACTTCCTCTATGGGTTCTaGCAAGCTAAACAAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: KGERRRSYSCVVPDLTADFLYGF*QAKQVK Trigger: TTTTACTTGTTTAGCTTGTCAGAACCCATAGAGGAA...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR GCA 90 bp | CCTCTATCCCAAACTGAAAAGAAACACTGTAAACCAAGACATCTAGTGATCTGGTCTAAAGGCCACAAATaGCCAGGCAGCCACTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: PLSQTEKKHCKPRHLVIWSKGHK*PGSHLN Trigger: ATTTAAGTGGCTGCCTGGGCATTTGTGGCCTTTAGA...CCAGATCACTAGATGTCTTGGTTTACAGTGTTTCTTTTCAGTTTGGGATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CCA 90 bp | AAAAGACTGCATTGGGCACAAGTTGTGAAATATGGGTTAATGTCTACAGTAATTGACTGGTGCTTGACATaGACACAGCTGTCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: KRLHWAQVVKYGLMSTVIDWCLT*TQLSGT Trigger: AGTCCCTGACAGCTGTGTCCATGTCAAGCACCAGTC...AATTACTGTAGACATTAACCCATATTTCACAACTTGTGCCCAATGCAGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCCATACAACAGAAATTTTCTCTaGAGTAACAAAGGCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LFGTELLHSDSLRRQEPYNRNFL*SNKGPL Trigger: TAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTT...GTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGACTGTTGGTCTCCAACAAATCTTTTGTAACCATAACTTACTGACGGGTTGCTGGCTGGCATTTTaGGAAACTCAAAGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KMTVGLQQIFCNHNLLTGCWLAF*ETQSSS Trigger: TGAAGAGCTTTGAGTTTCTCAAAATGCCAGCCAGCA...ACCCGTCAGTAAGTTATGGTTACAAAAGATTTGTTGGAGACCAACAGTCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR GCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGTGGAAATATTTATGTTaGTTCCTCAGACACAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HNLFGTELLHSDSLRRQEWKYLC*FLRHRF Trigger: AAACCTGTGTCTGAGGAAGCAACATAAATATTTCCA...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR CAA 90 bp | AGATATCTCCTGGGTAGAAAAGGGGCATCCTGGCACATTTCAACTTaGGGTTGCATTTATTTCAGGGTATTCTTGATTGCACTATTTAAA | + |
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Preference number: 2 (lower is better) Translates to: RYLLGRKGASWHIST*GCIYFRVFLIALFK Trigger: TTTAAATAGTGCAATCAAGAATACCCTGAAATAAATGCAACCCAAAGTTGAAATGTGCCAGGATGCCCCTTTTCTACCCAGGAGATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR TCA 90 bp | ATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCCTCTACATGGTGGGCATTGTTAGATGCAAATACTaGATTCTGAGTCTTCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: IITEIFSGVTKALYMVGIVRCKY*ILSLRV Trigger: TACACGAAGACTCAGAATTCAGTATTTGCATCTAAC...AATGCCCACCATGTAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTTAGCTTCTATAGGTACTCAGAAAGATGTATAGATAACCTGGTGTGCCATGAGAGGGTGCTATaGAAACTATTACTAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSLSFYRYSERCIDNLVCHERVL*KLLLTN Trigger: ATTTGTTAGTAATAGTTTGCATAGCACCCTCTCATG...GCACACCAGGTTATCTATACATCTTTCTGAGTACCTATAGAAGCTAAGGCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGAAACATCAGCTGTGTTTTGAACCTATCAATTCCCAACAACCTTTTGGGTATTCACAATCTGTTTaGTACAGAGTTACTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: MEKHQLCFEPINSQQPFGYSQSV*YRVTPL Trigger: GAGTGGAGTAACTCTGTACCAAACAGATTGTGAATA...CCCAAAAGGTTGTTGGGAATTGATAGGTTCAAAACACAGCTGATGTTTCTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CCA 90 bp | TATTTCTGTCTCATATTCTCTACCATGTTCCCATGCAGAAAATCTGGACAGGGGAACAAAAGACTGCATTaGGCACAAGTTGTGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: YFCLIFSTMFPCRKSGQGNKRLH*AQVVKY Trigger: ATATTTCACAACTTGTGCCCAATGCAGTCTTTTGTT...CCCCTGTCCAGATTTTCTGCATGGGAACATGGTAGAGAATATGAGACAGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGAAGTGATTTTCTGGAAGATAGAATCCAAAACTCTACAGACCACTACGTTAGATGCAAATACTaGATTCTGAGTCTTCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: KHRSDFLEDRIQNSTDHYVRCKY*ILSLRV Trigger: TACACGAAGACTCAGAATTCAGTATTTGCATCTAAC...GTAGTGGTCTGTAGAGTTTTGGATTCTATCTTCCAGAAAATCACTTCTGTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CCA 90 bp | AAAAGACTGCATTGGGCACAAGTTGTGAAATATGGGTTAATGTCTACAGTAATTAACAGAAATTTTCTCTaGAGTAACAAAGGCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: KRLHWAQVVKYGLMSTVINRNFL*SNKGPL Trigger: TAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTT...AATTACTGTAGACATTAACCCATATTTCACAACTTGTGCCCAATGCAGTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CAA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGAGAGCGGAGTCTGTCTaGGGGAGACTGGTGCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: LVFLSDLDCVHCGKALLKRAESV*GRLVLD Trigger: GTCAAGCACCAGTCTCCCCAAGACAGACTCCGCTCT...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR CCA 72 bp | GAGCGGAGTCTGTCTTGGGGAGACTGGTGCTTGACATaGACACAGCTGTCAGGGACTCCATTAGGTTTACAT | + |
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Preference number: 3 (lower is better) Translates to: ERSLSWGDWCLT*TQLSGTPLGLH Trigger: ATGTAAACCTAATGGAGTCCCTGACAGCTGTGTCCATGTCAAGCACCAGTCTCCCCAAGACAGACTCCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR GCA 72 bp | CAGGGCAAAGAGTTCTCACAGTTAACTGAGAGGTTGTaGCACTCACTGTGTCTCCAAAGGAGAAAGACGGAG | + |
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Preference number: 3 (lower is better) Translates to: QGKEFSQLTERL*HSLCLQRRKTE Trigger: CTCCGTCTTTCTCCTTTGGAGACACAGTGAGTGGCACAACCTCTCAGTTAACTGTGAGAACTCTTTGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR TCA 72 bp | TGCTTCTTTGCAGGGCAAAGAGTTCTCACAGTTAACTaGGAGGTTGTGCCACTCACTGTGTCTCCAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: CFFAGQRVLTVN*EVVPLTVSPKE Trigger: CTCCTTTGGAGACACAGTGAGTGGCACAACCTCTCAGTTAACTGTGAGAACTCTTTGCCCTGCAAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCCTTAGCTTCTATAGGTACTCAGAAAGATGTATAGATAACCTGGTGTGCTGGGGAGACTGGTGCTaGACATGGACACAGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LSLSFYRYSERCIDNLVCWGDWC*TWTQLS Trigger: TGACAGCTGTGTCCATGTCAAGCACCAGTCTCCCCA...GCACACCAGGTTATCTATACATCTTTCTGAGTACCTATAGAAGCTAAGGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CAA 90 bp | TATTTCTGTCTCATATTCTCTACCATGTTCCCATGCAGAAAATCTGGACAGGGGCACAACTGCTGCCAATaGCCTTCCCTTGAGCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: YFCLIFSTMFPCRKSGQGHNCCQ*PSLELG Trigger: TCCAAGCTCAAGGGAAGGCAATTGGCAGCAGTTGTG...CCCCTGTCCAGATTTTCTGCATGGGAACATGGTAGAGAATATGAGACAGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR CCA 72 bp | CTTAAGCCCATAGGGTCCATTAGACAGACCTGGAGGTaGGATTATGAGTTTGCAAATGGTGTTCTAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: LKPIGSIRQTWR*DYEFANGVLAT Trigger: TGTAGCTAGAACACCATTTGCAAACTCATAATCCCACCTCCAGGTCTGTCTAATGGACCCTATGGGCTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CAA 90 bp | CCTCTATCCCAAACTGAAAAGAAACACTGTAAACCAAGACATCTAGTGATCTGGCTCCACTCTGACTCTTaGAGGAGACAAGAGCCATAC | + |
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Preference number: 3 (lower is better) Translates to: PLSQTEKKHCKPRHLVIWLHSDS*RRQEPY Trigger: GTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGAG...CCAGATCACTAGATGTCTTGGTTTACAGTGTTTCTTTTCAGTTTGGGATAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR TCA 72 bp | TCTTTGAGGAGACAAGAGCCATACAAAGTGCTAGGTTaGAATGAGCTCATCTCAAAGCAACTGCTGGGAATG | + |
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Preference number: 3 (lower is better) Translates to: SLRRQEPYKVLG*NELISKQLLGM Trigger: CATTCCCAGCAGTTGCTTTGAGATGAGCTCATTTCAACCTAGCACTTTGTATGGCTCTTGTCTCCTCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR GCA 72 bp | GAGAATTGCCAAGTTTTATGTTGTGATGTTTCCCAGTaGACGATTAGCACTGCATCTCCCCAATTCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: ENCQVLCCDVSQ*TISTASPQFRS Trigger: GGATCTGAATTGGGGAGATGCAGTGCTAATCGTGCACTGGGAAACATCACAACATAAAACTTGGCAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR TCA 72 bp | TTCTCTTTAGCACAACTGCTGCCAATTGCCTTCCCTTaGGCTTGGAAATATTTATGTTGCTTCCTCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: FSLAQLLPIAFP*AWKYLCCFLRH Trigger: GTGTCTGAGGAAGCAACATAAATATTTCCAAGCTCAAGGGAAGGCAATTGGCAGCAGTTGTGCTAAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR CCA 72 bp | TCAAATCTTAAGCCCATAGGGTCCATTAGACAGACCTaGAGGTGGGATTATGAGTTTGCAAATGGTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SNLKPIGSIRQT*RWDYEFANGVL Trigger: TAGAACACCATTTGCAAACTCATAATCCCACCTCCAGGTCTGTCTAATGGACCCTATGGGCTTAAGATTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CAA 90 bp | CCATGGAGAACAGCCTGTATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCTCTACAGACCACTACTaGCTTCTCTGCTTTAGATCA | + |
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Preference number: 3 (lower is better) Translates to: PWRTACIITEIFSGVTKASTDHY*LLCFRS Trigger: TGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGA...GGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGATACAGGCTGTTCTCCATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR-3UTR CAA 90 bp | TATTTCTGTCTCATATTCTCTACCATGTTCCCATGCAGAAAATCTGGACAGGGGACTGCTGAAATGTTGTaGTCTCTTACCGTCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: YFCLIFSTMFPCRKSGQGTAEML*SLTVLR Trigger: TCTTAGGACGGTAAGAGACAACAACATTTCAGCAGT...CCCCTGTCCAGATTTTCTGCATGGGAACATGGTAGAGAATATGAGACAGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR-3UTR CAA 90 bp | ATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCCTCTACATGGTGGGCATTAGTTCAACACTGAGTTaGCTAGCACTGACTTCATAT | + |
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Preference number: 3 (lower is better) Translates to: IITEIFSGVTKALYMVGISSTLS*LALTSY Trigger: ATATGAAGTCAGTGCTAGCAAACTCAGTGTTGAACT...AATGCCCACCATGTAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| 3UTR TCA 72 bp | TGCTTACTTAGCACAGTAGAGCTAGTGAGATGTCACTaGTTATTTGTAACTAAGAGTGGTCCAACGATGAAC | + |
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Preference number: 3 (lower is better) Translates to: CLLSTVELVRCH*LFVTKSGPTMN Trigger: GTTCATCGTTGGACCACTCTTAGTTACAAATAATCAGTGACATCTCACTAGCTCTACTGTGCTAAGTAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| 3UTR GCA 72 bp | CTAGTTTGCATGCTCCCACTAACATCACAAACAATATaGCTATCTGCAAAATCAAATCTTAAGCCCATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LVCMLPLTSQTI*LSAKSNLKPIG Trigger: CCCTATGGGCTTAAGATTTGATTTTGCAGATAGGCATATTGTTTGTGATGTTAGTGGGAGCATGCAAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CCA 72 bp | GTTAACATAGCTGCCCGTAAGAATTACAATAGCTTCTaGTTCTGCCTGTTAAGTATGTCTTACTCAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VNIAARKNYNSF*FCLLSMSYSTA Trigger: TGCAGTTGAGTAAGACATACTTAACAGGCAGAACCAGAAGCTATTGTAATTCTTACGGGCAGCTATGTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CCA 72 bp | AGTTACTTCAGGATCAAAATCTCTAAGAATGCTGGCTaGCATTTTGAGAAACTCAAAGCTCTTCACAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SYFRIKISKNAG*HFEKLKALHSS Trigger: GCTACTGTGAAGAGCTTTGAGTTTCTCAAAATGCCAGCCAGCATTCTTAGAGATTTTGATCCTGAAGTAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CCA 72 bp | AATATAAGATATCTCCTGGGTAGAAAAGGGGCATCCTaGCACATTTCAACTTTGGGTTGCATTTATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NIRYLLGRKGAS*HISTLGCIYFR Trigger: CCTGAAATAAATGCAACCCAAAGTTGAAATGTGCCAGGATGCCCCTTTTCTACCCAGGAGATATCTTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR TCA 72 bp | GTTGAAATGAGCTCATCTCAAAGCAACTGCTGGGAATaGATCGTGAATATTCATGACTTTCTCTTTAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VEMSSSQSNCWE*IVNIHDFLFST Trigger: TGTGCTAAAGAGAAAGTCATGAATATTCACGATTCATTCCCAGCAGTTGCTTTGAGATGAGCTCATTTCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR GCA 72 bp | ATTCATGACTTTCTCTTTAGCACAACTGCTGCCAATTaGCTTCCCTTGAGCTTGGAAATATTTATGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IHDFLFSTTAAN*LPLSLEIFMLL Trigger: AAGCAACATAAATATTTCCAAGCTCAAGGGAAGGCAATTGGCAGCAGTTGTGCTAAAGAGAAAGTCATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR TCA 72 bp | TACTCAGAAAGATGTATAGATAACCTGGTGTGCACATaGGAGGGTGCTATGCAAACTATTACTAACAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: YSERCIDNLVCT*EGAMQTITNKC Trigger: ACATTTGTTAGTAATAGTTTGCATAGCACCCTCTCATGTGCACACCAGGTTATCTATACATCTTTCTGAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR TCA 72 bp | AACGAGTGGTCATCAATACAGAAAACCAAACACAGCTaGAGTTACTTCAGGATCAAAATCTCTAAGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NEWSSIQKTKHS*SYFRIKISKNA Trigger: AGCATTCTTAGAGATTTTGATCCTGAAGTAACTTCAGCTGTGTTTGGTTTTCTGTATTGATGACCACTCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR GCA 72 bp | ATGCAAATACTGAATTCTGAGTCTTCGTGTACATGTTaGATACTCTGTCAAATTAATGAAGCATGGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: MQILNSESSCTC*ILCQINEAWSW Trigger: CCAAGACCATGCTTCATTAATTTGACAGAGTATGCAACATGTACACGAAGACTCAGAATTCAGTATTTGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACGGGTTGCCTAAATGGAAACACATAATACTGAGGAATTCCTACAATTTTTTGGAAATATTTATGTaGCTTCCTCAGACACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TDGLPKWKHIILRNSYNFLEIFM*LPQTQV Trigger: AACCTGTGTCTGAGGAAGCAACATAAATATTTCCAA...AAAATTGTAGGAATTCCTCAGTATTATGTGTTTCCATTTAGGCAACCCGTCAGT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CCA 72 bp | AAGTCTCAACTTCCCACTCTTCATTTACACACCATTTaGATTTCTATTCACAATCTGTTTGGTACAGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KSQLPTLHLHTI*ISIHNLFGTEL Trigger: TAACTCTGTACCAAACAGATTGTGAATAGAAATCCAAATGGTGTGTAAATGAAGAGTGGGAAGTTGAGACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCCATACGAGTCATCGTCGGCCTaGAGGGCCGGGTGCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFGTELLHSDSLRRQEPYESSSA*RAGCAP Trigger: CGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTC...GTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACGCCTGGAGGGCCGGGTaGGCCCCGTTCACAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHAWRAG*APFTGL Trigger: AAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGC...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | CCATGGAGAACAGCCTGTATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCGAGTCATCGTCGGCCTaGAGGGCCGGGTGCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PWRTACIITEIFSGVTKAESSSA*RAGCAP Trigger: CGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTC...GGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGATACAGGCTGTTCTCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACTCCTCAGCAGGGATTTaGGGCGCTTCCACGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHSSAGI*GASTRR Trigger: CCGGCGCGTGGAAGCGCCTCAAATCCCTGCTGAGGA...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | GGGACTCCATTAGGTTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACGCCTGGAGGGCCGGGTaGGCCCCGTTCACAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTPLGLHLLLSSLYFRINAWRAG*APFTGL Trigger: AAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGC...GTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGAAATGCAGCTCTCACTaGCAAGCTGTCCTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLSDLDCVHCGKALLKKCSSH*QAVLPM Trigger: CATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTT...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | CCTCTATCCCAAACTGAAAAGAAACACTGTAAACCAAGACATCTAGTGATCTGGTCCTCAGCAGGGATTTaGGGCGCTTCCACGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSQTEKKHCKPRHLVIWSSAGI*GASTRR Trigger: CCGGCGCGTGGAAGCGCCTCAAATCCCTGCTGAGGA...CCAGATCACTAGATGTCTTGGTTTACAGTGTTTCTTTTCAGTTTGGGATAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCGAGGACCATGCTTGGGGAATTTaGAGGCAGGGAGTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSLYFRINKAVDPEDHAWGI*RQGVGM Trigger: CATTCCCACTCCCTGCCTTCAAATTCCCCAAGCATG...GTCCTCGGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCAGCGATGGTCAGCCTaGTCTTCACCTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFGTELLHSDSLRRQEQRWSA*SSPSSA Trigger: AGCAGAGGAAGGTGAAGACCAGGCTGACCATCGCTG...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR CAA 72 bp | GAAATCATGCAAATATTAGTCAGAGCGGAGTCTGTCTaGGGGAGACTGGTGCTTGACATGGACACAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIMQILVRAESV*GRLVLDMDTAV Trigger: GACAGCTGTGTCCATGTCAAGCACCAGTCTCCCCAAGACAGACTCCGCTCTGACTAATATTTGCATGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGATATGGATGGTTCTCTaGACAGCCTCATATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLSDLDCVHCGKALLKIWMVL*TASYKR Trigger: CCTCTTATATGAGGCTGTGCAGAGAACCATCCATAT...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACCAAGGCGTGTACAAATaGAGCTCTCACTGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGERRRSYSCVVPDLTADQGVYK*SSHCQA Trigger: AGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTG...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACCAAGGCGTGTACAAATaGAGCTCTCACTGCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHQGVYK*SSHCQA Trigger: AGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTG...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | TTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCAGCGATGGTCAGCCTaGTCTTCACCTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIALKSVLQDKQGRRPQRWSA*SSPSSA Trigger: AGCAGAGGAAGGTGAAGACCAGGCTGACCATCGCTG...GGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | TTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCGAGGACGCTGCATGTGAACTATaGCAGTGGATTTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSLYFRINKAVDPEDAACEL*QWIFQK Trigger: CTTCTGGAAAATCCACTGCCATAGTTCACATGCAGC...GTCCTCGGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCGAGGACGGAATTAGCTGCATGTaGACTATGGCAGTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSLYFRINKAVDPEDGISCM*TMAVDF Trigger: AAAATCCACTGCCATAGTTCACATGCAGCTAATTCC...GTCCTCGGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACTGCAACTCCAACAGCTaGAGTGATGAGCATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHCNSNS*SDEHDI Trigger: GATGTCATGCTCATCACTGCAGCTGTTGGAGTTGCA...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | TTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCAAATGCAGCTCTCACTaGCAAGCTGTCCTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FTFIALKSVLQDKQGRRPKCSSH*QAVLPM Trigger: CATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTT...GGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACAGAAGTCGAAGGCGCTaGTGTCATTTAAGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHRSRRR*CHLRTA Trigger: CGCTGTTCTTAAATGACACCAGCGCCTTCGACTTCT...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | TTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCGAGGACCATAGTTCATATGGATaGTTCTCTGCACAGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSLYFRINKAVDPEDHSSYG*FSAQPH Trigger: ATGAGGCTGTGCAGAGAACCATCCATATGAACTATG...GTCCTCGGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | CTCGTGTTTCTCTCTGATCTTGACTGTGTCCACTGTGGGAAGGCTCTCCTGAAGTACATTCAAATGGCTTaGTACACCTTCCAGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLSDLDCVHCGKALLKYIQMA*YTFQDY Trigger: ATAATCCTGGAAGGTGTACCAAGCCATTTGAATGTA...CTTCAGGAGAGCCTTCCCACAGTGGACACAGTCAAGATCAGAGAGAAACACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCAGGTACTGGAACTGTaGCAATTTGCACAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNLFGTELLHSDSLRRQEQVLEL*QFAQVL Trigger: CAGAACTTGTGCAAATTGTCACAGTTCCAGTACCTG...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCCGAGGACGGAACTGTGACAATTTaGACAAGTTCTGATCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSSLYFRINKAVDPEDGTVTI*TSSDHF Trigger: GAAGTGATCAGAACTTGTGCAAATTGTCACAGTTCC...GTCCTCGGGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGATATGGATGGTTCTCTaGACAGCCTCATATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLFGTELLHSDSLRRQEIWMVL*TASYKR Trigger: CCTCTTATATGAGGCTGTGCAGAGAACCATCCATAT...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR CAA 72 bp | ACACAGCTGTCAGGGACTCCATTAGGTTTACATTTATaGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLSGTPLGLHL*LSSLYFRINKA Trigger: GGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCCTGACAGCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR CAA 72 bp | TCAGGATCAAAATCTCTAAGAATGCTGGCTGGCATTTaGAGAAACTCAAAGCTCTTCACAGTAGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSKSLRMLAGI*RNSKLFTVAAQ Trigger: CTGAGCAGCTACTGTGAAGAGCTTTGAGTTTCTCAAAATGCCAGCCAGCATTCTTAGAGATTTTGATCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CAA 72 bp | CTGGGTAGAAAAGGGGCATCCTGGCACATTTCAACTTaGGGTTGCATTTATTTCAGGGTATTCTTGATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRKGASWHIST*GCIYFRVFLIA Trigger: TGCAATCAAGAATACCCTGAAATAAATGCAACCCAAAGTTGAAATGTGCCAGGATGCCCCTTTTCTACCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACATTTTCAAACTCAGCTaGCTGTTGGTTAAAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGERRRSYSCVVPDLTADIFKLS*LLVKGK Trigger: CTTACCTTTAACCAACAGTCAGCTGAGTTTGAAAAT...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACGGAACTGTGACAATTTaGACAAGTTCTGATCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHGTVTI*TSSDHF Trigger: GAAGTGATCAGAACTTGTGCAAATTGTCACAGTTCC...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR CAA 72 bp | GGTATCATACGTAGTGGCACATTCTGTAGCTTTATCTaGACTACATACAAGGTAGTCAACAGCAGAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIIRSGTFCSFI*TTYKVVNSRVQ Trigger: CTGAACTCTGCTGTTGACTACCTTGTATGTAGTCAAGATAAAGCTACAGAATGTGCCACTACGTATGATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGAATTTGCACAAGTTCTaGTCACTTCTTGTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HNLFGTELLHSDSLRRQENLHKF*SLLVCN Trigger: GTTACAGACAAGAAGTGATCAGAACTTGTGCAAATT...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR TCA 90 bp | GGGACTCCATTAGGTTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACCAGGTACTGGAACTGTaGCAATTTGCACAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTPLGLHLLLSSLYFRINQVLEL*QFAQVL Trigger: CAGAACTTGTGCAAATTGTCACAGTTCCAGTACCTG...GTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | ATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCCTCTACATGGTGGGCATTGTTAAAGGTAAGTCCTaGTCCAATAAGGAGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IITEIFSGVTKALYMVGIVKGKS*SNKESS Trigger: CGATGACTCCTTATTGGACCAGGACTTACCTTTAAC...AATGCCCACCATGTAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTATCCCAAACTGAAAAGAAACACTGTAAACCAAGACATCTAGTGATCTGGCATAGTTCATATGGATaGTTCTCTGCACAGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSQTEKKHCKPRHLVIWHSSYG*FSAQPH Trigger: ATGAGGCTGTGCAGAGAACCATCCATATGAACTATG...CCAGATCACTAGATGTCTTGGTTTACAGTGTTTCTTTTCAGTTTGGGATAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR CCA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGTACATTCAAATGGCTTaGTACACCTTCCAGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFGTELLHSDSLRRQEYIQMA*YTFQDY Trigger: ATAATCCTGGAAGGTGTACCAAGCCATTTGAATGTA...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR TCA 90 bp | AAGCACAGAAGTGATTTTCTGGAAGATAGAATCCAAAACTCTACAGACCACTACGATGAAATCCAAAGGTaGATCTTCTGGTTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KHRSDFLEDRIQNSTDHYDEIQR*IFWLVT Trigger: AGTCACCAACCAGAAGATTCACCTTTGGATTTCATC...GTAGTGGTCTGTAGAGTTTTGGATTCTATCTTCCAGAAAATCACTTCTGTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | TTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCAAAACCTCTAGGCGATaGAATCCAAAGGTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTFIALKSVLQDKQGRRPKTSRR*NPKVNL Trigger: AAGATTCACCTTTGGATTTCATCGCCTAGAGGTTTT...GGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTGGAATTAGCTGCATGTaGACTATGGCAGTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGGISCM*TMAVDF Trigger: AAAATCCACTGCCATAGTTCACATGCAGCTAATTCC...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR TCA 90 bp | TATTTCTGTCTCATATTCTCTACCATGTTCCCATGCAGAAAATCTGGACAGGGGAATTTGCACAAGTTCTaGTCACTTCTTGTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YFCLIFSTMFPCRKSGQGNLHKF*SLLVCN Trigger: GTTACAGACAAGAAGTGATCAGAACTTGTGCAAATT...CCCCTGTCCAGATTTTCTGCATGGGAACATGGTAGAGAATATGAGACAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTTAGCTTCTATAGGTACTCAGAAAGATGTATAGATAACCTGGTGTGCCATTATTACATTAACTaGAACTCCAACAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSFYRYSERCIDNLVCHYYIN*NSNSCS Trigger: ACTGCAGCTGTTGGAGTTGCAGTTAATGTAATAATG...GCACACCAGGTTATCTATACATCTTTCTGAGTACCTATAGAAGCTAAGGCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGACTGCATTGGGCACAAGTTGTGAAATATGGGTTAATGTCTACAGTAATTAGAAGTCGAAGGCGCTaGTGTCATTTAAGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KRLHWAQVVKYGLMSTVIRSRRR*CHLRTA Trigger: CGCTGTTCTTAAATGACACCAGCGCCTTCGACTTCT...AATTACTGTAGACATTAACCCATATTTCACAACTTGTGCCCAATGCAGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR CCA 90 bp | GGGACTCCATTAGGTTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACAACTCAGCTGACTGTTaGTTAAAGGTAAGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTPLGLHLLLSSLYFRINNSADC*LKVSPG Trigger: ACCAGGACTTACCTTTAACCAACAGTCAGCTGAGTT...GTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGACTGTTGGTCTCCAACAAATCTTTTGTAACCATAACTTACTGACGGGTGCTGCATGTGAACTATaGCAGTGGATTTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KMTVGLQQIFCNHNLLTGAACEL*QWIFQK Trigger: CTTCTGGAAAATCCACTGCCATAGTTCACATGCAGC...ACCCGTCAGTAAGTTATGGTTACAAAAGATTTGTTGGAGACCAACAGTCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAAACATCAGCTGTGTTTTGAACCTATCAATTCCCAACAACCTTTTGGGCATTATTACATTAACTaGAACTCCAACAGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MEKHQLCFEPINSQQPFGHYYIN*NSNSCS Trigger: ACTGCAGCTGTTGGAGTTGCAGTTAATGTAATAATG...CCCAAAAGGTTGTTGGGAATTGATAGGTTCAAAACACAGCTGATGTTTCTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTGAATCGTATGATGTATaGAGCTATAAGCACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGESYDV*SYKHTN Trigger: GTTGGTGTGCTTATAGCTGCATACATCATACGATTC...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGACTGTTGGTCTCCAACAAATCTTTTGTAACCATAACTTACTGACGGGTAACTCAGCTGACTGTTaGTTAAAGGTAAGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KMTVGLQQIFCNHNLLTGNSADC*LKVSPG Trigger: ACCAGGACTTACCTTTAACCAACAGTCAGCTGAGTT...ACCCGTCAGTAAGTTATGGTTACAAAAGATTTGTTGGAGACCAACAGTCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| 3UTR CAA 72 bp | CTGGAAGATAGAATCCAAAACTCTACAGACCACTACTaGCTTCTCTGCTTTAGATCATCATATGGTAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEDRIQNSTDHY*LLCFRSSYGKV Trigger: TACCTTACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGATTCTATCTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| 3UTR CAA 72 bp | AACTGCATTCTTGGTATGCTTCTTAAGACAGCAAGATaGTTAGTCAGACAGAGTCTTCCTAAAACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCILGMLLKTAR*LVRQSLPKTKD Trigger: GTCTTTTGTTTTAGGAAGACTCTGTCTGACTAACAATCTTGCTGTCTTAAGAAGCATACCAAGAATGCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR TCA 90 bp | CTGAATTCTGAGTCTTCGTGTACATGTTGCATACTCTGTCAAATTAATGAAGCAATTTTCAAACTCAGCTaGCTGTTGGTTAAAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSESSCTCCILCQINEAIFKLS*LLVKGK Trigger: CTTACCTTTAACCAACAGTCAGCTGAGTTTGAAAAT...TGCTTCATTAATTTGACAGAGTATGCAACATGTACACGAAGACTCAGAATTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGACTGCATTGGGCACAAGTTGTGAAATATGGGTTAATGTCTACAGTAATTGAATCGTATGATGTATaGAGCTATAAGCACACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLHWAQVVKYGLMSTVIESYDV*SYKHTN Trigger: GTTGGTGTGCTTATAGCTGCATACATCATACGATTC...AATTACTGTAGACATTAACCCATATTTCACAACTTGTGCCCAATGCAGTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR CCA 90 bp | CTGAATTCTGAGTCTTCGTGTACATGTTGCATACTCTGTCAAATTAATGAAGCAAGGTCAGTTAGCATATaGAGTGCATCTGTCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: LNSESSCTCCILCQINEARSVSI*SASVII Trigger: AATTATGACAGATGCACTCCATATGCTAACTGACCT...TGCTTCATTAATTTGACAGAGTATGCAACATGTACACGAAGACTCAGAATTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS GCA 90 bp | AAGTCCTGGTCCAATAAGGAGTCATCGTCGGCCTGGAGGGCCGGGTaGGCCCCGTTCACAGGCCTTTCCGGGGCTTCCGAGTCATCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KSWSNKESSSAWRAG*APFTGLSGASESSS Trigger: CGACGATGACTCGGAAGCCCCGGAAAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTCCTTATTGGACCAGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 90 bp | TTGGTTAAAGGTAAGTCCTGGTCCAATAAGGAGTCATCGTCGGCCTaGAGGGCCGGGTGCGCCCCGTTCACAGGCCTTTCCGGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKGKSWSNKESSSA*RAGCAPFTGLSGAS Trigger: GGAAGCCCCGGAAAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTCCTTATTGGACCAGGACTTACCTTTAACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 90 bp | GCGAAAGCCCCTCGTCGCTCACCTCGTCCGAGAAGTCGAAGGCGCTaGTGTCATTTAAGAACAGCGGCGTGTCGTCTTTCCTCAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AKAPRRSPRPRSRRR*CHLRTAACRLSSAG Trigger: CCCTGCTGAGGAAAGACGACACGCCGCTGTTCTTAAATGACACCAGCGCCTTCGACTTCTCGGACGAGGTGAGCGACGAGGGGCTTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 90 bp | GCCTGGTCTTCACCTTCCTCTGCTTCAGCAACTCGCGTCGCTTGCTaGAGTTGTCACAGGGGTCCATTTTCAAACTCAGCTGACTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWSSPSSASATRVAC*SCHRGPFSNSADCW Trigger: CCAACAGTCAGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGAAGACCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 90 bp | TCAGCCTGGTCTTCACCTTCCTCTGCTTCAGCAACTCGCGTCGCTTaGTGCAGTTGTCACAGGGGTCCATTTTCAAACTCAGCTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAWSSPSSASATRVA*CSCHRGPFSNSADC Trigger: ACAGTCAGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGAAGACCAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 90 bp | AAGCACACCAACACTTTGTACCAAGTCTCCCAAGGCGTGTACAAATaGAGCTCTCACTGCCAAGCTGTCCTGCCCATGGTTGTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KHTNTLYQVSQGVYK*SSHCQAVLPMVVST Trigger: AGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGACTTGGTACAAAGTGTTGGTGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 90 bp | AAGGCGTGTACAAATGCAGCTCTCACTGCCAAGCTGTCCTGCCCATaGTTGTGTCCACTAGATACCATGCTTGGGGAATTTGAAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KACTNAALTAKLSCP*LCPLDTMLGEFEGR Trigger: CCTGCCTTCAAATTCCCCAAGCATGGTATCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCTCAGACACAGGTTTAGTGTCCATCCTTATTTCAGTTCTTCTGTGCACTTCCTCAGCAGGGATTaGAGGCGCTTCCACGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CFLRHRFSVHPYFSSSVHFLSRD*RRFHAP Trigger: CGGCGCGTGGAAGCGCCTCAAATCCCTGCTGAGGAA...GTGCACAGAAGAACTGAAATAAGGATGGACACTAAACCTGTGTCTGAGGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 90 bp | TCTCCCAAGGCGTGTACAAATGCAGCTCTCACTGCCAAGCTGTCCTaGCCATGGTTGTGTCCACTAGATACCATGCTTGGGGAATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKACTNAALTAKLS*PWLCPLDTMLGEFE Trigger: TTCAAATTCCCCAAGCATGGTATCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 90 bp | ACTTTGTACCAAGTCTCCCAAGGCGTGTACAAATGCAGCTCTCACTaGCAAGCTGTCCTGCCCATGGTTGTGTCCACTAGATACCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLYQVSQGVYKCSSH*QAVLPMVVSTRYHA Trigger: AGCATGGTATCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGACTTGGTACAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS TCA 90 bp | CGTCGCTTGCTGCAGTTGTCACAGGGGTCCATTTTCAAACTCAGCTaGCTGTTGGTTAAAGGTAAGTCCTGGTCCAATAAGGAGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RRLLQLSQGSIFKLS*LLVKGKSWSNKESS Trigger: CGATGACTCCTTATTGGACCAGGACTTACCTTTAACCAACAGTCAGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 90 bp | TGCTGCAGTTGTCACAGGGGTCCATTTTCAAACTCAGCTGACTGTTaGTTAAAGGTAAGTCCTGGTCCAATAAGGAGTCATCGTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CCSCHRGPFSNSADC*LKVSPGPIRSHRRP Trigger: AGGCCGACGATGACTCCTTATTGGACCAGGACTTACCTTTAACCAACAGTCAGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTTTCCTCAGCAGGGATTaGAGGCGCTTCCACGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGFLSRD*RRFHAP Trigger: CGGCGCGTGGAAGCGCCTCAAATCCCTGCTGAGGAA...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACCTGTCCTGCCCATGGTaGTGTCCACTAGATACCATG | + |
|
Preference number: 5 (lower is better) Translates to: KGERRRSYSCVVPDLTADLSCPW*CPLDTM Trigger: CATGGTATCTAGTGGACACAACCATGGGCAGGACAG...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR CAA 90 bp | AAGCACAGAAGTGATTTTCTGGAAGATAGAATCCAAAACTCTACAGACCACTACCTGTCCTGCCCATGGTaGTGTCCACTAGATACCATG | + |
|
Preference number: 5 (lower is better) Translates to: KHRSDFLEDRIQNSTDHYLSCPW*CPLDTM Trigger: CATGGTATCTAGTGGACACAACCATGGGCAGGACAG...GTAGTGGTCTGTAGAGTTTTGGATTCTATCTTCCAGAAAATCACTTCTGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | TTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACAAGGCCGTAGACCCAAGCACACCAACACTTaGTACCAAGTCTCCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTFIALKSVLQDKQGRRPKHTNT*YQVSQG Trigger: GCCTTGGGAGACTTGGTACAAAGTGTTGGTGTGCTT...GGGTCTACGGCCTTGTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGAAAGACGGAGATCTTACAGCTGTGTAGTCCCTGATCTAACTGCTGACATGGGATCAGCAATCTaGTATTCTGGCTTGAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: KGERRRSYSCVVPDLTADMGSAI*YSGLNR Trigger: ACGATTCAAGCCAGAATACAAGATTGCTGATCCCAT...GTCAGCAGTTAGATCAGGGACTACACAGCTGTAAGATCTCCGTCTTTCTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
||
| CDS-3UTR CAA 90 bp | CACAATCTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCTACATTCAAATGGCTaGGTACACCTTCCAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: HNLFGTELLHSDSLRRQELHSNG*VHLPGL Trigger: TAATCCTGGAAGGTGTACCAAGCCATTTGAATGTAG...CTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | CTGTTTGGTACAGAGTTACTCCACTCTGACTCTTTGAGGAGACAAGAGCCATACATCTTGTATTCTGGCTaGAATCGTATGATGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFGTELLHSDSLRRQEPYILYSG*NRMMYA Trigger: TGCATACATCATACGATTCAAGCCAGAATACAAGAT...GTATGGCTCTTGTCTCCTCAAAGAGTCAGAGTGGAGTAACTCTGTACCAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS TCA 90 bp | TACTGTGTCCCATATGATGCGAAACGTTGTGAAAGCCACAAGCAATaGAAATATATACGTACAGATGGGATCAGCAATCTTGTATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YCVPYDAKRCESHKQ*KYIRTDGISNLVFW Trigger: CCAGAATACAAGATTGCTGATCCCATCTGTACGTATATATTTTCATTGCTTGTGGCTTTCACAACGTTTCGCATCATATGGGACACAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTATGGGATCAGCAATCTaGTATTCTGGCTTGAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGMGSAI*YSGLNR Trigger: ACGATTCAAGCCAGAATACAAGATTGCTGATCCCAT...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | CTGAATTCTGAGTCTTCGTGTACATGTTGCATACTCTGTCAAATTAATGAAGCACTACATTCAAATGGCTaGGTACACCTTCCAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LNSESSCTCCILCQINEALHSNG*VHLPGL Trigger: TAATCCTGGAAGGTGTACCAAGCCATTTGAATGTAG...TGCTTCATTAATTTGACAGAGTATGCAACATGTACACGAAGACTCAGAATTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | ATCATAACAGAAATTTTCTCTGGAGTAACAAAGGCCCTCTACATGGTGGGCATTAATAAATGCTTAGCTTaGGACTGTACTTCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IITEIFSGVTKALYMVGINKCLA*DCTSSH Trigger: ATGGGAAGAAGTACAGTCCAAAGCTAAGCATTTATT...AATGCCCACCATGTAGAGGGCCTTTGTTACTCCAGAGAAAATTTCTGTTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | GGGACTCCATTAGGTTTACATTTATTGCTCTCAAGTCTGTACTTCAGGATAAACATCTTGTATTCTGGCTaGAATCGTATGATGTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTPLGLHLLLSSLYFRINILYSG*NRMMYA Trigger: TGCATACATCATACGATTCAAGCCAGAATACAAGAT...GTTTATCCTGAAGTACAGACTTGAGAGCAATAAATGTAAACCTAATGGAGTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAACTCTACAGACCACTACTTGCTTCTCTGCTTTAGATCATCATATGGTAATAAATGCTTAGCTTaGGACTGTACTTCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQNSTDHYLLLCFRSSYGNKCLA*DCTSSH Trigger: ATGGGAAGAAGTACAGTCCAAAGCTAAGCATTTATT...ACCATATGATGATCTAAAGCAGAGAAGCAAGTAGTGGTCTGTAGAGTTTTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 72 bp | TCCAATAAGGAGTCATCGTCGGCCTGGAGGGCCGGGTaGGCCCCGTTCACAGGCCTTTCCGGGGCTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SNKESSSAWRAG*APFTGLSGASE Trigger: CTCGGAAGCCCCGGAAAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTCCTTATTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 72 bp | GGTAAGTCCTGGTCCAATAAGGAGTCATCGTCGGCCTaGAGGGCCGGGTGCGCCCCGTTCACAGGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKSWSNKESSSA*RAGCAPFTGLS Trigger: GGAAAGGCCTGTGAACGGGGCGCACCCGGCCCTCCAGGCCGACGATGACTCCTTATTGGACCAGGACTTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS GCA 72 bp | ACGGCAGCGATGGTCAGCCTGGTCTTCACCTTCCTCTaGTTCAGCAACTCGCGTCGCTTGCTGCAGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TAAMVSLVFTFL*FSNSRRLLQLS Trigger: TGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGAAGACCAGGCTGACCATCGCTGCCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
||
| CDS CCA 72 bp | CCTCGTCGCTCACCTCGTCCGAGAAGTCGAAGGCGCTaGTGTCATTTAAGAACAGCGGCGTGTCGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PRRSPRPRSRRR*CHLRTAACRLS Trigger: GGAAAGACGACACGCCGCTGTTCTTAAATGACACCAGCGCCTTCGACTTCTCGGACGAGGTGAGCGACGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | GCGTGTACAAATGCAGCTCTCACTGCCAAGCTGTCCTaGCCATGGTTGTGTCCACTAGATACCATGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ACTNAALTAKLS*PWLCPLDTMLG Trigger: CCCAAGCATGGTATCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | CAAGTCTCCCAAGGCGTGTACAAATGCAGCTCTCACTaGCAAGCTGTCCTGCCCATGGTTGTGTCCACTAGA | + |
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Preference number: 6 (lower is better) Translates to: QVSQGVYKCSSH*QAVLPMVVSTR Trigger: TCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS CAA 90 bp | GCGTGTACAAATGCAGCTCTCACTGCCAAGCTGTCCTGCCCATGGTaGTGTCCACTAGATACCATGCTTGGGGAATTTGAAGGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ACTNAALTAKLSCPW*CPLDTMLGEFEGRE Trigger: CTCCCTGCCTTCAAATTCCCCAAGCATGGTATCTAGTGGACACAACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | TCACCTTCCTCTGCTTCAGCAACTCGCGTCGCTTGCTaGAGTTGTCACAGGGGTCCATTTTCAAACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPSSASATRVAC*SCHRGPFSNSA Trigger: AGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS CAA 72 bp | GTCTTCACCTTCCTCTGCTTCAGCAACTCGCGTCGCTaGCTGCAGTTGTCACAGGGGTCCATTTTCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: VFTFLCFSNSRR*LQLSQGSIFKL Trigger: GAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | TCTTCACCTTCCTCTGCTTCAGCAACTCGCGTCGCTTaGTGCAGTTGTCACAGGGGTCCATTTTCAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: SSPSSASATRVA*CSCHRGPFSNS Trigger: TGAGTTTGAAAATGGACCCCTGTGACAACTGCAGCAAGCGACGCGAGTTGCTGAAGCAGAGGAAGGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | AACACTTTGTACCAAGTCTCCCAAGGCGTGTACAAATaGAGCTCTCACTGCCAAGCTGTCCTGCCCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: NTLYQVSQGVYK*SSHCQAVLPMV Trigger: AACCATGGGCAGGACAGCTTGGCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGACTTGGTACAAAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS TCA 72 bp | TATTTGCCATGTATCCACCTACAAGCTCTCCGATCATaGAAAGCAAGTAGAGGACGGCAGCGATGGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: YLPCIHLQALRS*KASRGRQRWSA Trigger: GGCTGACCATCGCTGCCGTCCTCTACTTGCTTTTCATGATCGGAGAGCTTGTAGGTGGATACATGGCAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| CDS TCA 72 bp | TGGCCGACAAAACCTCTAGGCGATGAAATCCAAAGGTaGATCTTCTGGTTGGTGACTTTGAGGACAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: WPTKPLGDEIQR*IFWLVTLRTAT Trigger: TGTGGCTGTCCTCAAAGTCACCAACCAGAAGATTCACCTTTGGATTTCATCGCCTAGAGGTTTTGTCGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| CDS CAA 90 bp | TGGCTTGAATCGTATGATGTATGCAGCTATAAGCACACCAACACTTaGTACCAAGTCTCCCAAGGCGTGTACAAATGCAGCTCTCACTGC | + |
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Preference number: 6 (lower is better) Translates to: WLESYDVCSYKHTNT*YQVSQGVYKCSSHC Trigger: GCAGTGAGAGCTGCATTTGTACACGCCTTGGGAGACTTGGTACAAAGTGTTGGTGTGCTTATAGCTGCATACATCATACGATTCAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS TCA 72 bp | CTGCAGTTGTCACAGGGGTCCATTTTCAAACTCAGCTaGCTGTTGGTTAAAGGTAAGTCCTGGTCCAATAAG | + |
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Preference number: 6 (lower is better) Translates to: LQLSQGSIFKLS*LLVKGKSWSNK Trigger: CTTATTGGACCAGGACTTACCTTTAACCAACAGTCAGCTGAGTTTGAAAATGGACCCCTGTGACAACTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS TCA 72 bp | AGAGGAATCCCATTAGTACATACACCAGCATTACACTaGTCATGGCCGACAAAACCTCTACAAGCTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: RGIPLVHTPALH*SWPTKPLQALR Trigger: TCGGAGAGCTTGTAGAGGTTTTGTCGGCCATGATCAGTGTAATGCTGGTGTATGTACTAATGGGATTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099457.4 |
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| CDS TCA 72 bp | AGAGGAATCCCATTAGTACATACACCAGCATTACACTaGTCATGGCCGACAAAACCTCTAGGCGATGAAATC | + |
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Preference number: 6 (lower is better) Translates to: RGIPLVHTPALH*SWPTKPLGDEI Trigger: GATTTCATCGCCTAGAGGTTTTGTCGGCCATGATCAGTGTAATGCTGGTGTATGTACTAATGGGATTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| CDS CCA 72 bp | AGAGTGAGTATGATGGCACTAAGGTCAGTTAGCATATaGAGTGCATCTGTCATAATTGCTAAGCTATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: RVSMMALRSVSI*SASVIIAKLFA Trigger: GGCAAATAGCTTAGCAATTATGACAGATGCACTCCATATGCTAACTGACCTTAGTGCCATCATACTCACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005952.11 |
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| CDS GCA 72 bp | AAACCCCATTATTACATTAACTGCAACTCCAACAGCTaGAGTGATGAGCATGACATCGCCGTTTATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: KPHYYINCNSNS*SDEHDIAVYFI Trigger: TATGAAATAAACGGCGATGTCATGCTCATCACTGCAGCTGTTGGAGTTGCAGTTAATGTAATAATGGGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | AGCAATCTTGTATTCTGGCTTGAATCGTATGATGTATaGAGCTATAAGCACACCAACACTTTGTACCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SNLVFWLESYDV*SYKHTNTLYQV Trigger: GACTTGGTACAAAGTGTTGGTGTGCTTATAGCTGCATACATCATACGATTCAAGCCAGAATACAAGATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS CAA 90 bp | GTGCATTTGTACATGCCAAACGTGTTCAGTAATAAATGCTTAGCTTaGGACTGTACTTCTTCCCATTTAGATGAACTTCCAGGAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: VHLYMPNVFSNKCLA*DCTSSHLDELPGIS Trigger: GCTAATTCCTGGAAGTTCATCTAAATGGGAAGAAGTACAGTCCAAAGCTAAGCATTTATTACTGAACACGTTTGGCATGTACAAATGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS TCA 72 bp | CCATATGATGCGAAACGTTGTGAAAGCCACAAGCAATaGAAATATATACGTACAGATGGGATCAGCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: PYDAKRCESHKQ*KYIRTDGISNL Trigger: AAGATTGCTGATCCCATCTGTACGTATATATTTTCATTGCTTGTGGCTTTCACAACGTTTCGCATCATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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| CDS GCA 72 bp | GTGCATTTGTACATGCCAAACGTGTTCAGTAATAAATaGTTAGCTTTGGACTGTACTTCTTCCCATTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: VHLYMPNVFSNK*LALDCTSSHLD Trigger: ATCTAAATGGGAAGAAGTACAGTCCAAAGCTAAGCATTTATTACTGAACACGTTTGGCATGTACAAATGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005952.11 ENSMUST00000099457.4 |
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