Pregenerated sensors for SLC30A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037434Ensembl transcript IDs: ENSMUST00000044954.7, ENSMUST00000161756.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATTCACGACCACGATCACGGAGCCCAAGGCATCTCCAAGGACGTaGAGAAACACTCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: AFTTTITEPKASPRT*RNTPRIFSCPALLS Trigger: AGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCACGTCCTTGGAGATGCCTTGGGCTCCGTGATCGTGGTCGTGAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR TCA 90 bp | GGAAGGATCCTGTTTGAGTGTATGCTTCCTCACTCAGCTCCACACTaGCCTGGCTCAAGTGAGAAGGAACCAGGGAAGCCTCCCCCTACC | + |
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Preference number: 1 (lower is better) Translates to: GRILFECMLPHSAPH*PGSSEKEPGKPPPT Trigger: GGTAGGGGGAGGCTTCCCTGGTTCCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAGGATCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 90 bp | AAGGCATCTCCAAGGACGTGCAGAAACACTCCTCGCATATTCAGCTaGCCAGCCCTGTTGTCTTCCGCTTCCAGATTGTCAGACTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KASPRTCRNTPRIFS*PALLSSASRLSDSW Trigger: CCAGGAGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCACGTCCTTGGAGATGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR GCA 90 bp | ATCTGTGGCAATGGAGCAGCCGTGAATGACTTCCTGGGTGCAAAGTaGAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: ICGNGAAVNDFLGAK*RVLQRKHFASQHAK Trigger: CTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCACTTTGCACCCAGGAAGTCATTCACGGCTGCTCCATTGCCACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 90 bp | TGCAAAGTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATaGCAAGGCACGGTGGCTAAAGATCCAAGCCTTCCTCTTACTGGT | + |
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Preference number: 1 (lower is better) Translates to: CKVQSPAEKALCKPA*QGTVAKDPSLPLTG Trigger: ACCAGTAAGAGGAAGGCTTGGATCTTTAGCCACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCACTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 90 bp | TGTTCCAAGGCTGCACATGGCTTGGAAGGATCCTGTTTGAGTGTATaGTTCCTCACTCAGCTCCACACTGACCTGGCTCAAGTGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: CSKAAHGLEGSCLSV*FLTQLHTDLAQVRR Trigger: CCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 90 bp | AAGTCCATTGTTCCAAGGCTGCACATGGCTTGGAAGGATCCTGTTTaGGTGTATGCTTCCTCACTCAGCTCCACACTGACCTGGCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: KSIVPRLHMAWKDPV*VYASSLSSTLTWLK Trigger: CTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 90 bp | AGTAGACAGGACCAACTCGAGAGCGTCTCAGAGAATCAGACACACTaGCACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SRQDQLESVSENQTH*HPIVLFQGRPISWP Trigger: TGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTGTCAGTGTGTCTGATTCTCTGAGACGCTCTCGAGTTGGTCCTGTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 90 bp | CAAATGTCTGCGTTGGATTTGAAATCTGTGGCAATGGAGCAGCCGTaGATGACTTCCTGGGTGCAAAGTGCAGAGTCCTGCAGAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: QMSALDLKSVAMEQP*MTSWVQSAESCRES Trigger: GCTTTCTCTGCAGGACTCTGCACTTTGCACCCAGGAAGTCATTCACGGCTGCTCCATTGCCACAGATTTCAAATCCAACGCAGACATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CCA 90 bp | AGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATTGTCAGACTCCTaGATGAGATTCCCATTTACTTGTACATCCACTGGGTCATCACTT | + |
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Preference number: 1 (lower is better) Translates to: SCPALLSSASRLSDS*MRFPFTCTSTGSSL Trigger: AAGTGATGACCCAGTGGATGTACAAGTAAATGGGAATCTCATCCAGGAGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR CCA 90 bp | GTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTaGCTAAAGATCCAAGCCTTCCTCTTACTGGTTTTGCTTTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: VLQRKHFASQHAKAR*LKIQAFLLLVLLSK Trigger: TTTAGAAAGCAAAACCAGTAAGAGGAAGGCTTGGATCTTTAGCCACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGATGGAGCAGCCGTGAATaGCTTCCTGGGTGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KADHGKASPLFQGCTWLGWSSRE*LPGCKV Trigger: CACTTTGCACCCAGGAAGTCATTCACGGCTGCTCCA...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR GCA 90 bp | TTGAGTGTATGCTTCCTCACTCAGCTCCACACTGACCTGGCTCAAGTGAGAAGGGCAGAGAAAGCACTTTaGAAGCCAGCATGCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSVCFLTQLHTDLAQVRRAEKAL*KPACQG Trigger: GCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGC...CCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CAA 90 bp | CAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGAAGGATCCTGTTaGAGTGTATGCTTCCTCACTCAGCTCCACACTGACCTGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QVHCSKAAHGLEGSC*SVCFLTQLHTDLAQ Trigger: TTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CAA 90 bp | CCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATaGTCAGACTCCTGGATGAGATTCCCATTTACTTGTACATCCACT | + |
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Preference number: 2 (lower is better) Translates to: PRIFSCPALLSSASR*SDSWMRFPFTCTST Trigger: AGTGGATGTACAAGTAAATGGGAATCTCATCCAGGAGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTGATGACTCTGGAAATATaGTGCCATTATGGTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VQSPAEKALCKPACQGTVMTLEI*CHYGLF Trigger: AAACAGACCATAATGGCAGCATATTTCCAGAGTCAT...CACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR TCA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTCCACAAGGTAAAAGCTaGCCATGGGAAAGCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: HPIVLFQGRPISWPFVSFPQGKS*PWESKS Trigger: GGACTTGCTTTCCCATGGTCAGCTTTTACCTTGTGG...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTGCTGTTAATTATCTCTACAGACGATTTGCAGGGATCAGGAAAACACGGGCATCTCCAAGGACGTaGAGAAACACTCCTCGCATA | + |
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Preference number: 2 (lower is better) Translates to: LGAVNYLYRRFAGIRKTRASPRT*RNTPRI Trigger: TATGCGAGGAGTGTTTCTGCACGTCCTTGGAGATGC...CCGTGTTTTCCTGATCCCTGCAAATCGTCTGTAGAGATAATTAACAGCACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGATGTGTTGGCTGCCCATaGAGAAATGTATTCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KADHGKASPLFQGCTWLGCVGCP*RNVFIP Trigger: TGGAATGAATACATTTCTTCATGGGCAGCCAACACA...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAACATTTCCTATTGCCAATCCGCTCTCCAGATTTGTGTAGGACTACCTCTGACCTGGCTCAAGTaGGAAGGAACCAGGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: KINISYCQSALQICVGLPLTWLK*EGTREA Trigger: GGCTTCCCTGGTTCCTTCTCACTTGAGCCAGGTCAG...AGGTAGTCCTACACAAATCTGGAGAGCGGATTGGCAATAGGAAATGTTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGATCATTTTTAAGTCACTaGCTCTTGGCTAAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: KADHGKASPLFQGCTWLGSFLSH*LLAKHT Trigger: TGTGTGCTTAGCCAAGAGCCAGTGACTTAAAAATGA...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CAA 90 bp | GCCAAGGCACGGTGGCTAAAGATCCAAGCCTTCCTCTTACTGGTTTaGCTTTCTAAAGTAATATCCAAATTGCATGAGCCATGTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: AKARWLKIQAFLLLV*LSKVISKLHEPCDF Trigger: GAAATCACATGGCTCATGCAATTTGGATATTACTTTAGAAAGCAAAACCAGTAAGAGGAAGGCTTGGATCTTTAGCCACCGTGCCTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CAA 90 bp | CCAAATTGCATGAGCCATGTGATTTCATTTTTAAGTCACTGGCTCTaGGCTAAGCACACACTGTGTTGGCTGCCCATGAAGAAATGTATT | + |
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Preference number: 2 (lower is better) Translates to: PNCMSHVISFLSHWL*AKHTLCWLPMKKCI Trigger: AATACATTTCTTCATGGGCAGCCAACACAGTGTGTGCTTAGCCAAGAGCCAGTGACTTAAAAATGAAATCACATGGCTCATGCAATTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR TCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGTGTCTGCGTTGGATTTaGAATCTGTGGCAATGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CIYAALYQNSVITVPFSRCLRWI*NLWQWS Trigger: GCTCCATTGCCACAGATTTCAAATCCAACGCAGACA...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR CCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGTTCCAAGGCTGCACATaGCTTGGAAGGATCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CIYAALYQNSVITVPFSRFQGCT*LGRILF Trigger: AAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAA...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR TCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGTGTATTCATTCCATCTaGTGGGTCACTATGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: CIYAALYQNSVITVPFSRCIHSI*WVTMEV Trigger: AACTTCCATAGTGACCCATCAGATGGAATGAATACA...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 72 bp | GCTTCCTCACTCAGCTCCACACTGACCTGGCTCAAGTaGGAAGGAACCAGGGAAGCCTCCCCCTACCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: ASSLSSTLTWLK*EGTREASPYPN Trigger: GTTGGGGTAGGGGGAGGCTTCCCTGGTTCCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | TGCCGCACTCGAGTTCAAGATGAGCCCCATCAACTATaGCTGTGGCCCAGAGCACAGGCGGCAGTAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: CRTRVQDEPHQL*LWPRAQAAVDR Trigger: CCTGTCTACTGCCGCCTGTGCTCTGGGCCACAGGCATAGTTGATGGGGCTCATCTTGAACTCGAGTGCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | GGCCTCCTGTACCCCTGTGGAAACACTGAACCCTTCTaGACAGTACCATCCGAGACAACTGGAGCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: GLLYPCGNTEPF*TVPSETTGAPA Trigger: AGCGGGAGCTCCAGTTGTCTCGGATGGTACTGTGCAGAAGGGTTCAGTGTTTCCACAGGGGTACAGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | ACCACGATCACGGAGCCCAAGGCATCTCCAAGGACGTaGAGAAACACTCCTCGCATATTCAGCTGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TTITEPKASPRT*RNTPRIFSCPA Trigger: GGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCACGTCCTTGGAGATGCCTTGGGCTCCGTGATCGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR CCA 72 bp | ACTCGAGTTCAAGATGAGCCCCATCAACTATGCCTGTaGCCCAGAGCACAGGCGGCAGTAGACAGGACCAAC | + |
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Preference number: 3 (lower is better) Translates to: TRVQDEPHQLCL*PRAQAAVDRTN Trigger: GTTGGTCCTGTCTACTGCCGCCTGTGCTCTGGGCCACAGGCATAGTTGATGGGGCTCATCTTGAACTCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | CAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATaGCAAGGCACGGTGGCTAAAGATCCAAGCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: QSPAEKALCKPA*QGTVAKDPSLP Trigger: AGGAAGGCTTGGATCTTTAGCCACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | GGGTGCAAAGTGCAGAGTCCTGCAGAGAAAGCACTTTaGAAGCCAGCATGCCAAGGCACGGTGGCTAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: GCKVQSPAEKAL*KPACQGTVAKD Trigger: ATCTTTAGCCACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCACTTTGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 72 bp | GCGTTGGATTTGAAATCTGTGGCAATGGAGCAGCCGTaGATGACTTCCTGGGTGCAAAGTGCAGAGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ALDLKSVAMEQP*MTSWVQSAESC Trigger: GCAGGACTCTGCACTTTGCACCCAGGAAGTCATTCACGGCTGCTCCATTGCCACAGATTTCAAATCCAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 72 bp | CTGTTTGAGTGTATGCTTCCTCACTCAGCTCCACACTaGCCTGGCTCAAGTGAGAAGGAACCAGGGAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LFECMLPHSAPH*PGSSEKEPGKP Trigger: AGGCTTCCCTGGTTCCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | AATGGAGCAGCCGTGAATGACTTCCTGGGTGCAAAGTaGAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: NGAAVNDFLGAK*RVLQRKHFASQ Trigger: CTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCACTTTGCACCCAGGAAGTCATTCACGGCTGCTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | GCTGCACATGGCTTGGAAGGATCCTGTTTGAGTGTATaGTTCCTCACTCAGCTCCACACTGACCTGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: AAHGLEGSCLSV*FLTQLHTDLAQ Trigger: TTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGACCCTGCAGCCCTGACTaGGGAGAGGAAGCACATTTA | + |
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Preference number: 3 (lower is better) Translates to: KADHGKASPLFQGCTWLGPCSPD*GEEAHL Trigger: TAAATGTGCTTCCTCTCCCAAGTCAGGGCTGCAGGG...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | GCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTaGACATGGCTTGGAAGGATCCTGTTTGAGTGTATG | + |
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Preference number: 3 (lower is better) Translates to: ADHGKASPLFQG*TWLGRILFECM Trigger: CATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CCA 72 bp | CATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATaGCTTGGAAGGATCCTGTTTGAGTGTATGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: HGKASPLFQGCT*LGRILFECMLP Trigger: AGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 72 bp | GGCTCTTGGCTAAGCACACACTGTGTTGGCTGCCCATaGAGAAATGTATTCATTCCATCTGATGGGTCACTA | + |
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Preference number: 3 (lower is better) Translates to: GSWLSTHCVGCP*RNVFIPSDGSL Trigger: TAGTGACCCATCAGATGGAATGAATACATTTCTTCATGGGCAGCCAACACAGTGTGTGCTTAGCCAAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR CAA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTTTGGAAGGATCCTGTTaGAGTGTATGCTTCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: HPIVLFQGRPISWPFVSFLEGSC*SVCFLT Trigger: AGTGAGGAAGCATACACTCAAACAGGATCCTTCCAA...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR TCA 72 bp | TGTTGTCTTCCGCTTCCAGATTGTCAGACTCCTGGATaGGATTCCCATTTACTTGTACATCCACTGGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: CCLPLPDCQTPG*DSHLLVHPLGH Trigger: ATGACCCAGTGGATGTACAAGTAAATGGGAATCTCATCCAGGAGTCTGACAATCTGGAAGCGGAAGACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| 3UTR CCA 72 bp | AATTGCATGAGCCATGTGATTTCATTTTTAAGTCACTaGCTCTTGGCTAAGCACACACTGTGTTGGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: NCMSHVISFLSH*LLAKHTLCWLP Trigger: GGGCAGCCAACACAGTGTGTGCTTAGCCAAGAGCCAGTGACTTAAAAATGAAATCACATGGCTCATGCAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR-3UTR CAA 90 bp | AAAATAAACATTTCCTATTGCCAATCCGCTCTCCAGATTTGTGTAGGACTACCTCCCTCCAAGGTAAACTaGATGGAAACCCTCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: KINISYCQSALQICVGLPPSKVN*METLPA Trigger: AGCAGGGAGGGTTTCCATCAAGTTTACCTTGGAGGG...AGGTAGTCCTACACAAATCTGGAGAGCGGATTGGCAATAGGAAATGTTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR CCA 72 bp | GCTAAGAGTCATGACTCTGGAAATATGCTGCCATTATaGTCTGTTTATGATCTCAAAGGGCAAGCAACCATC | + |
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Preference number: 3 (lower is better) Translates to: AKSHDSGNMLPL*SVYDLKGQATI Trigger: GATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | GACTTTCTGCTAAGAGTCATGACTCTGGAAATATGCTaGCATTATGGTCTGTTTATGATCTCAAAGGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: DFLLRVMTLEIC*HYGLFMISKGK Trigger: CTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTTAGCAGAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| 3UTR GCA 72 bp | ACTGACTTTCTGCTAAGAGTCATGACTCTGGAAATATaGTGCCATTATGGTCTGTTTATGATCTCAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TDFLLRVMTLEI*CHYGLFMISKG Trigger: GCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTTAGCAGAAAGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR TCA 72 bp | GGGTCAGATCACATATTAGTCAAGTATTATGTAGGTTaGAGGTTGGCCCAGTGTAGTAAATGTGAGCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: GSDHILVKYYVG*RLAQCSKCELT Trigger: TGTAAGCTCACATTTACTACACTGGGCCAACCTTCAACCTACATAATACTTGACTAATATGTGATCTGACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR TCA 72 bp | ACATATGTATATATGCAGCACTGTATCAAAATAGTGTaGTTACAGTCCCATTTTCCAGGTCGTGAAGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TYVYMQHCIKIV*LQSHFPGREAL Trigger: TAGTGCTTCACGACCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | ACGTGCAGAAACACTCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTTGGCGAGGTGGCCGTaGCCGTGGCCGTGCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCRNTPRIFSCPALLSSALARWP*PWPCEW Trigger: CCACTCGCACGGCCACGGCCACGGCCACCTCGCCAA...AGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGCATCGGGGCCTGGGTGCTGTTAATTATCTCTACAGACGATTTGCAGGGCCTTGCGCGCGCCCTTaGCGAGGTGGCCGTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VTHRGLGAVNYLYRRFAGPCARP*RGGRGR Trigger: ACGGCCACGGCCACCTCGCCAAGGGCGCGCGCAAGG...CCCTGCAAATCGTCTGTAGAGATAATTAACAGCACCCAGGCCCCGATGCGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGACGTGCAGAAACACTCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTGGCCACCAGCGTGTTaGTCTCCTCCTGGTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKDVQKHSSHIQLPSPVVWPPAC*SPPGPA Trigger: CGCCGGACCAGGAGGAGACCAACACGCTGGTGGCCA...GACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCACGTCCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTGGTAGAGCACCCAGCATaGGCCAGCGTCACGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQSPAEKALCKPACQGTVVEHPA*ASVTHR Trigger: CCGATGCGTGACGCTGGCCCATGCTGGGTGCTCTAC...CACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTGGGCTGCTGCATCTCATaGGGCTCGATGAAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VQSPAEKALCKPACQGTVGCCIS*GSMKRS Trigger: CGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCC...CACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | TCACGACCACGATCACGGAGCCCAAGGCATCTCCAAGGACGTGCAGAAACACTCGGCTGCTGCATCTCATaGGGCTCGATGAAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRPRSRSPRHLQGRAETLGCCIS*GSMKRS Trigger: CGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCC...GAGTGTTTCTGCACGTCCTTGGAGATGCCTTGGGCTCCGTGATCGTGGTCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTGACGTGTTCTTCTGCGTaGCGTGAGTCCTCCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VQSPAEKALCKPACQGTVTCSSA*RESSGR Trigger: TCGCCCGGAGGACTCACGCCACGCAGAAGAACACGT...CACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR TCA 90 bp | ACTCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATTGTCATCTCATGCGGCTCGATaGAGCGCTCGACGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRIFSCPALLSSASRLSSHAAR*SARRLP Trigger: TGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGA...TGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATTGTCAGACTTCAGCCCGTTGGAATTaGTGGTGTTGGCCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAYSAAQPCCLPLPDCQTSARWN*WCWPPA Trigger: CGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGA...AGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATTGTCAGACCGCCTTCAGCCCGTTaGAATTGCTGGTGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHIQLPSPVVFRFQIVRPPSAR*NCWCWP Trigger: TGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGG...TCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGATCTCATGCGGCTCGATaGAGCGCTCGACGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KADHGKASPLFQGCTWLGSHAAR*SARRLP Trigger: TGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGA...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGTATGCTTCCTCACTCAGCTCCACACTGACCTGGCTCAAGTGAGAAGGTGCTTCAGGGCACACTaGGTTCTGCAGGCGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVCFLTQLHTDLAQVRRCFRAH*VLQASS Trigger: TGAGCTCGCCTGCAGAACTCAGTGTGCCCTGAAGCA...CCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | ATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCCCCTAGGTCAGCAGCAGCATaGACAGCAGCCGGCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICCHYGLFMISKGKQPSPRSAAA*TAAGRG Trigger: ACCGCGGCCGGCTGCTGTGCATGCTGCTGCTGACCT...AGGGGATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGCTGCAATGTAGCACTCTCTATTAGGCAGTTCCATTATGTTCTTACATTGGCGAGGTGGCCGTaGCCGTGGCCGTGCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGCNVALSIRQFHYVLTLARWP*PWPCEW Trigger: CCACTCGCACGGCCACGGCCACGGCCACCTCGCCAA...TGTAAGAACATAATGGAACTGCCTAATAGAGAGTGCTACATTGCAGCCTTGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | AAAATAAACATTTCCTATTGCCAATCCGCTCTCCAGATTTGTGTAGGACTACCTCCTTGCGCGCGCCCTTaGCGAGGTGGCCGTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KINISYCQSALQICVGLPPCARP*RGGRGR Trigger: ACGGCCACGGCCACCTCGCCAAGGGCGCGCGCAAGG...AGGTAGTCCTACACAAATCTGGAGAGCGGATTGGCAATAGGAAATGTTTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | AGAAACACTCCTCGCATATTCAGCTGCCCAGCCCTGTaGTCTTCCGCTTCCAGATTGTCAGACTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RNTPRIFSCPAL*SSASRLSDSWM Trigger: CATCCAGGAGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR GCA 90 bp | CGCTTCCAGATTGTCAGACTCCTGGATGAGATTCCCATTTACTTGTACATCCACACCACGAGCGGCTGCTaGATCTCATGCGGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RFQIVRLLDEIPIYLYIHTTSGC*ISCGSM Trigger: CATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGT...GTGGATGTACAAGTAAATGGGAATCTCATCCAGGAGTCTGACAATCTGGAAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTGTATGCTTCCTCACTCAGCTCCACACTGACCTGGCTCAAGTGAGAAGGGCATCTCCAAGGACGTaGAGAAACACTCCTCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSVCFLTQLHTDLAQVRRASPRT*RNTPRI Trigger: TATGCGAGGAGTGTTTCTGCACGTCCTTGGAGATGC...CCTTCTCACTTGAGCCAGGTCAGTGTGGAGCTGAGTGAGGAAGCATACACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGCTGCAATGTAGCACTCTCTATTAGGCAGTTCCATTATGTTCTTACATGGCCACCAGCGTGTTaGTCTCCTCCTGGTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGCNVALSIRQFHYVLTWPPAC*SPPGPA Trigger: CGCCGGACCAGGAGGAGACCAACACGCTGGTGGCCA...TGTAAGAACATAATGGAACTGCCTAATAGAGAGTGCTACATTGCAGCCTTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGCTGTTAATTATCTCTACAGACGATTTGCAGGGATCAGGAAAACACGGGCCCGTTGGAATTGCTaGTGTTGGCCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAVNYLYRRFAGIRKTRARWNC*CWPPAC Trigger: ACACGCTGGTGGCCAACACCAGCAATTCCAACGGGC...CCGTGTTTTCCTGATCCCTGCAAATCGTCTGTAGAGATAATTAACAGCACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR GCA 90 bp | GGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCACCACGAGCGGCTGCTaGATCTCATGCGGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GNMLPLWSVYDLKGQATITTSGC*ISCGSM Trigger: CATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGT...GATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | CACAAGGTAAAAGCTGACCATGGGAAAGCAAGTCCATaGTTCCAAGGCTGCACATGGCTTGGAAGGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKVKADHGKASP*FQGCTWLGRIL Trigger: CAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTTTACCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | TTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGATaGTCAGACTCCTGGATGAGATTCCCATTTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCPALLSSASR*SDSWMRFPFTC Trigger: ACAAGTAAATGGGAATCTCATCCAGGAGTCTGACAATCTGGAAGCGGAAGACAACAGGGCTGGGCAGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATGACTCTGGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAATTCTTCTGCGTGGCGTaGGTCCTCCGGGCGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHDSGNMLPLWSVYDLKFFCVA*VLRAKR Trigger: GCGCTTCGCCCGGAGGACTCACGCCACGCAGAAGAA...TTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | GGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCTCAGCCCGTTGGAATTaGTGGTGTTGGCCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNMLPLWSVYDLKGQATISARWN*WCWPPA Trigger: CGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGA...GATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTTGTTGGCGCCTTCTCTaGATCCTTCCCAGAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPIVLFQGRPISWPFVSFCWRLL*ILPRMH Trigger: GTGCATTCTGGGAAGGATGCAGAGAAGGCGCCAACA...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | GGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTaGGAAGGATCCTGTTTGAGTGTATGCTTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKQVHCSKAAHG*EGSCLSVCFLT Trigger: AGTGAGGAAGCATACACTCAAACAGGATCCTTCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATGACTCTGGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAATGTGGGCAGTGGCGATaGTCCTGCTTCCCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSHDSGNMLPLWSVYDLKCGQWR*SCFPPA Trigger: AGCTGGCGGGAAGCAGGATCATCGCCACTGCCCACA...TTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAGTCCTGCAGAGAAAGCACTTTGCAAGCCAGCATGCCAAGGCACGGTGTGTTTGATATCGATTTaGTTAGGGACAGTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQSPAEKALCKPACQGTVCLISI*LGTVCR Trigger: TCTACAAACTGTCCCTAAGCAAATCGATATCAAACA...CACCGTGCCTTGGCATGCTGGCTTGCAAAGTGCTTTCTCTGCAGGACTCTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | TCACAAGGCTGCAATGTAGCACTCTCTATTAGGCAGTTCCATTATGTTCTTACAGCCCGTTGGAATTGCTaGTGTTGGCCACCAGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGCNVALSIRQFHYVLTARWNC*CWPPAC Trigger: ACACGCTGGTGGCCAACACCAGCAATTCCAACGGGC...TGTAAGAACATAATGGAACTGCCTAATAGAGAGTGCTACATTGCAGCCTTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATGACTCTGGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAACGAAGCACAGCCCCGTaGGGAAGATGGCGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHDSGNMLPLWSVYDLKRSTAP*GRWRSP Trigger: TGGTGAACGCCATCTTCCTCACGGGGCTGTGCTTCG...TTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGGCATCCTTCCCAGAATaGACCTGTGGCCGTGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CIYAALYQNSVITVPFSRASFPE*TCGRVP Trigger: CGGGACACGGCCACAGGTGCATTCTGGGAAGGATGC...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGCCGCCTTCAGCCCGTTaGAATTGCTGGTGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CIYAALYQNSVITVPFSRPPSAR*NCWCWP Trigger: TGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGG...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | ATGAGCCATGTGATTTCATTTTTAAGTCACTGGCTCTaGGCTAAGCACACACTGTGTTGGCTGCCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSHVISFLSHWL*AKHTLCWLPMK Trigger: CTTCATGGGCAGCCAACACAGTGTGTGCTTAGCCAAGAGCCAGTGACTTAAAAATGAAATCACATGGCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR GCA 90 bp | TGTATATATGCAGCACTGTATCAAAATAGTGTGATTACAGTCCCATTTTCCAGGCAATTTTTCTGGCTCTaGCTGGTCCGCCTTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CIYAALYQNSVITVPFSRQFFWL*LVRLQP Trigger: GGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTG...CCTGGAAAATGGGACTGTAATCACACTATTTTGATACAGTGCTGCATATATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | ATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCCCCTAGAAATGCTAACTGTTaGCGCCTTCTCTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICCHYGLFMISKGKQPSPRNANC*RLLCIL Trigger: AAGGATGCAGAGAAGGCGCCAACAGTTAGCATTTCT...AGGGGATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR TCA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTTCTCTAGATTCTCACTaGGTTCTAAACAAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: HPIVLFQGRPISWPFVSFSLDSH*VLNKKC Trigger: GCATTTCTTGTTTAGAACTCAGTGAGAATCTAGAGA...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTTTCGGGCTGTTTGTTTaGCACGTTTTTAATCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HPIVLFQGRPISWPFVSFFGLFV*HVFNLY Trigger: ATAGAGATTAAAAACGTGCCAAACAAACAGCCCGAA...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | CGGTGGCTAAAGATCCAAGCCTTCCTCTTACTGGTTTaGCTTTCTAAAGTAATATCCAAATTGCATGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLKIQAFLLLV*LSKVISKLHEP Trigger: TGGCTCATGCAATTTGGATATTACTTTAGAAAGCAAAACCAGTAAGAGGAAGGCTTGGATCTTTAGCCACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCATGACTCTGGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAAACTTCTCAATTTTTCTaGCTCTGCCTGGTCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHDSGNMLPLWSVYDLKTSQFF*LCLVRL Trigger: AAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGT...TTTGAGATCATAAACAGACCATAATGGCAGCATATTTCCAGAGTCATGACTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| 3UTR CAA 72 bp | AATAAACATTTCCTATTGCCAATCCGCTCTCCAGATTaGTGTAGGACTACCTTAAGACAGCAGGTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKHFLLPIRSPD*CRTTLRQQVND Trigger: GTCATTAACCTGCTGTCTTAAGGTAGTCCTACACAAATCTGGAGAGCGGATTGGCAATAGGAAATGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
||
| CDS TCA 90 bp | GGCCCTCGCCGCTGTGATGGTGGAACAGACAGAGCCCCAGCACGTTaGCCAGCAGCCCCGCCACGCCGACGCTCAGCACCACGAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPRRCDGGTDRAPAR*PAAPPRRRSAPRAA Trigger: AGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGGGCTGCTGGTCAACGTGCTGGGGCTCTGTCTGTTCCACCATCACAGCGGCGAGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
||
| CDS GCA 90 bp | ACCAGCAGCCCCGCCACGCCGACGCTCAGCACCACGAGCGGCTGCTaGATCTCATGCGGCTCGATGAAGCGCTCGACGGCTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSSPATPTLSTTSGC*ISCGSMKRSTASSR Trigger: CCTGCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGGGCTGCTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
||
| CDS GCA 90 bp | CCCGCCACGCCGACGCTCAGCACCACGAGCGGCTGCTGCATCTCATaGGGCTCGATGAAGCGCTCGACGGCTTCCAGCAGGATGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PATPTLSTTSGCCIS*GSMKRSTASSRMAK Trigger: CTTCGCCATCCTGCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS GCA 90 bp | TTGACCAGCAGCCCCGCCACGCCGACGCTCAGCACCACGAGCGGCTaGTGCATCTCATGCGGCTCGATGAAGCGCTCGACGGCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LTSSPATPTLSTTSG*CISCGSMKRSTASS Trigger: GCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGGGCTGCTGGTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS CCA 90 bp | CGCCCATCACCTCAGCGCGGATCCAGCCGAACGTGTTCTTCTGCGTaGCGTGAGTCCTCCGGGCGAAGCGCTCGGCCACCAGCGCCACTA | + |
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Preference number: 5 (lower is better) Translates to: RPSPQRGSSRTCSSA*RESSGRSARPPAPL Trigger: TAGTGGCGCTGGTGGCCGAGCGCTTCGCCCGGAGGACTCACGCCACGCAGAAGAACACGTTCGGCTGGATCCGCGCTGAGGTGATGGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS TCA 90 bp | ATCACCTCAGCGCGGATCCAGCCGAACGTGTTCTTCTGCGTGGCGTaGGTCCTCCGGGCGAAGCGCTCGGCCACCAGCGCCACTACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSARIQPNVFFCVA*VLRAKRSATSATTS Trigger: GCTCGTAGTGGCGCTGGTGGCCGAGCGCTTCGCCCGGAGGACTCACGCCACGCAGAAGAACACGTTCGGCTGGATCCGCGCTGAGGTGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS TCA 90 bp | CGACGCTCAGCACCACGAGCGGCTGCTGCATCTCATGCGGCTCGATaGAGCGCTCGACGGCTTCCAGCAGGATGGCGAAGCACAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSAPRAAAASHAAR*SARRLPAGWRSTAP Trigger: CGGGGCTGTGCTTCGCCATCCTGCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS-3UTR CAA 90 bp | GTGCAGAAACACTCCTCGCATATTCAGCTGCCCAGCCCTGTTGTCTTCCGCTTCCAGAGCCCCAGCACGTaGACCAGCAGCCCCGCCACG | + |
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Preference number: 5 (lower is better) Translates to: VQKHSSHIQLPSPVVFRFQSPST*TSSPAT Trigger: CGTGGCGGGGCTGCTGGTCAACGTGCTGGGGCTCTG...GAAGCGGAAGACAACAGGGCTGGGCAGCTGAATATGCGAGGAGTGTTTCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| CDS TCA 90 bp | CAGGGCACACTGAGTTCTGCAGGCGAGCTCACACGGGAGCACACTTaGCTTAGAGCCGACGCTAGCGAATTCAGGCTGGATGGTGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: QGTLSSAGELTREHT*LRADASEFRLDGGS Trigger: GCTACCACCATCCAGCCTGAATTCGCTAGCGTCGGCTCTAAGTCAAGTGTGCTCCCGTGTGAGCTCGCCTGCAGAACTCAGTGTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 90 bp | GCTAACTGTTGGCGCCTTCTCTGCATCCTTCCCAGAATGCACCTGTaGCCGTGTCCCGCAGCACTGCTTCAGGGCACACTGAGTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ANCWRLLCILPRMHL*PCPAALLQGTLSSA Trigger: TGCAGAACTCAGTGTGCCCTGAAGCAGTGCTGCGGGACACGGCCACAGGTGCATTCTGGGAAGGATGCAGAGAAGGCGCCAACAGTTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | AAAGCTGACCATGGGAAAGCAAGTCCATTGTTCCAAGGCTGCACATGGCTTGGACAGAGCCCCAGCACGTaGACCAGCAGCCCCGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KADHGKASPLFQGCTWLGQSPST*TSSPAT Trigger: CGTGGCGGGGCTGCTGGTCAACGTGCTGGGGCTCTG...TCCAAGCCATGTGCAGCCTTGGAACAATGGACTTGCTTTCCCATGGTCAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS GCA 90 bp | TCACATTTTATGTGGGCAGTGGCGATGATCCTGCTTCCCGCCAGCTaGCAGACATGTAGCTCATGGACTTCCTCAACGCCGTCAACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHFMWAVAMILLPAS*QTCSSWTSSTPSTS Trigger: AGACGTTGACGGCGTTGAGGAAGTCCATGAGCTACATGTCTGGCAGCTGGCGGGAAGCAGGATCATCGCCACTGCCCACATAAAATGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 90 bp | TGTACATCCACTGGGTCATCACTTCTCAATTTTTCTGGCTCTGCCTaGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTTGGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTSTGSSLLNFSGSA*SAFSPLELLVLATS Trigger: GCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGTGGATGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | GCCTGGGTGCTGTTAATTATCTCTACAGACGATTTGCAGGGATCAGGAAAACACTTGGCCACCAGCGTGTaGGTCTCCTCCTGGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AWVLLIISTDDLQGSGKHLATSV*VSSWSG Trigger: GCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAA...GTGTTTTCCTGATCCCTGCAAATCGTCTGTAGAGATAATTAACAGCACCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| CDS GCA 90 bp | TACTTGTACATCCACTGGGTCATCACTTCTCAATTTTTCTGGCTCTaGCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLYIHWVITSQFFWL*LVRLQPVGIAGVGH Trigger: GTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGTGGATGTACAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | GGAAATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCTTGGCCACCAGCGTGTaGGTCTCCTCCTGGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNMLPLWSVYDLKGQATILATSV*VSSWSG Trigger: GCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAA...GATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | CACCCCATTGTGCTGTTTCAAGGCAGACCCATATCATGGCCATTTGTGTCTTTTTTCAGCCCGTTGGAATaGCTGGTGTTGGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPIVLFQGRPISWPFVSFFSPLE*LVLATS Trigger: GCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAA...AAAAGACACAAATGGCCATGATATGGGTCTGCCTTGAAACAGCACAATGGGGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 90 bp | CCCATTTACTTGTACATCCACTGGGTCATCACTTCTCAATTTTTCTaGCTCTGCCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PIYLYIHWVITSQFF*LCLVRLQPVGIAGV Trigger: AACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGTGGATGTACAAGTAAATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | GTCGTCTTCAGTACAACCCTTCCAGTTAAAGTAAAAGACCAAGGCATTCACGACTTCAGCCCGTTGGAATaGCTGGTGTTGGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVFSTTLPVKVKDQGIHDFSPLE*LVLATS Trigger: GCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAA...GTCGTGAATGCCTTGGTCTTTTACTTTAACTGGAAGGGTTGTACTGAAGACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| CDS-3UTR CAA 90 bp | ATATGCTGCCATTATGGTCTGTTTATGATCTCAAAGGGCAAGCAACCATCCCCTTTGGAATTGCTGGTGTaGGCCACCAGCGTGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ICCHYGLFMISKGKQPSPLELLV*ATSVLV Trigger: GACCAACACGCTGGTGGCCAACACCAGCAATTCCAA...AGGGGATGGTTGCTTGCCCTTTGAGATCATAAACAGACCATAATGGCAGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS GCA 90 bp | CCGTCAACGTCTCGAAGCTCTTTCACCAAGTGTTTGATATCGATTTaGTTAGGGACAGTTTGTAGAAGAATGAGAGCAGACTCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSTSRSSFTKCLISI*LGTVCRRMRADSLS Trigger: GCTCAAGGAGTCTGCTCTCATTCTTCTACAAACTGTCCCTAAGCAAATCGATATCAAACACTTGGTGAAAGAGCTTCGAGACGTTGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | CATAGTGTTAAAACTGGCTTTCAAACGTGTTCCAGCATAGCTGCACTATGCACTATCTCTACAGACGATTaGCAGGGATCAGGAAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HSVKTGFQTCSSIAALCTISTDD*QGSGKH Trigger: GTGTTTTCCTGATCCCTGCAAATCGTCTGTAGAGAT...AGTGCATAGTGCAGCTATGCTGGAACACGTTTGAAAGCCAGTTTTAACACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS-3UTR CAA 90 bp | AAAATAAACATTTCCTATTGCCAATCCGCTCTCCAGATTTGTGTAGGACTACCTTCTTTCACCAAGTGTTaGATATCGATTTGCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KINISYCQSALQICVGLPSFTKC*ISICLG Trigger: CCCTAAGCAAATCGATATCAAACACTTGGTGAAAGA...AGGTAGTCCTACACAAATCTGGAGAGCGGATTGGCAATAGGAAATGTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS TCA 72 bp | GCGCGGATCCAGCCGAACGTGTTCTTCTGCGTGGCGTaGGTCCTCCGGGCGAAGCGCTCGGCCACCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARIQPNVFFCVA*VLRAKRSATSA Trigger: GGCGCTGGTGGCCGAGCGCTTCGCCCGGAGGACTCACGCCACGCAGAAGAACACGTTCGGCTGGATCCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS GCA 72 bp | CCCGCCACGCCGACGCTCAGCACCACGAGCGGCTGCTaGATCTCATGCGGCTCGATGAAGCGCTCGACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PATPTLSTTSGC*ISCGSMKRSTA Trigger: AGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS GCA 72 bp | AGCCCCGCCACGCCGACGCTCAGCACCACGAGCGGCTaGTGCATCTCATGCGGCTCGATGAAGCGCTCGACG | + |
|
Preference number: 6 (lower is better) Translates to: SPATPTLSTTSG*CISCGSMKRST Trigger: CGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGGCGTGGCGGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS CCA 72 bp | CCTCAGCGCGGATCCAGCCGAACGTGTTCTTCTGCGTaGCGTGAGTCCTCCGGGCGAAGCGCTCGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PQRGSSRTCSSA*RESSGRSARPP Trigger: TGGTGGCCGAGCGCTTCGCCCGGAGGACTCACGCCACGCAGAAGAACACGTTCGGCTGGATCCGCGCTGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS GCA 72 bp | CCGACGCTCAGCACCACGAGCGGCTGCTGCATCTCATaGGGCTCGATGAAGCGCTCGACGGCTTCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTLSTTSGCCIS*GSMKRSTASSR Trigger: CCTGCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGCTGAGCGTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS TCA 72 bp | GCACCACGAGCGGCTGCTGCATCTCATGCGGCTCGATaGAGCGCTCGACGGCTTCCAGCAGGATGGCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: APRAAAASHAAR*SARRLPAGWRS Trigger: GCTTCGCCATCCTGCTGGAAGCCGTCGAGCGCTTCATCGAGCCGCATGAGATGCAGCAGCCGCTCGTGGTGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044954.7 ENSMUST00000161756.2 |
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| CDS CCA 72 bp | CCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTTaGCCACCAGCGTGTTGGTCTCCTCCTGGTCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGPPSARWNCWC*PPACWSPPGPA Trigger: CGCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CAA 72 bp | GCCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTaGGCCACCAGCGTGTTGGTCTCCTCCTGGTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AWSAFSPLELLV*ATSVLVSSWSG Trigger: GCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS TCA 72 bp | CGACGGCTTCCAGCAGGATGGCGAAGCACAGCCCCGTaGGGAAGATGGCGTTCACCAGTGCGCCCATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLPAGWRSTAP*GRWRSPVRPSP Trigger: AGGTGATGGGCGCACTGGTGAACGCCATCTTCCTCACGGGGCTGTGCTTCGCCATCCTGCTGGAAGCCGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | TCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTTaGCCACCAGCGTGTTGGTCTCCTCCTGGTCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGPPSARWNCWC*PPACWSPPGPA Trigger: CGCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| CDS CAA 72 bp | CTCTGGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTaGGCCACCAGCGTGTTGGTCTCCTCCTGGTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWSAFSPLELLV*ATSVLVSSWSG Trigger: GCCGGACCAGGAGGAGACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161756.2 |
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| CDS TCA 72 bp | TGTGGCCGTGTCCCGCAGCACTGCTTCAGGGCACACTaGGTTCTGCAGGCGAGCTCACACGGGAGCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: CGRVPQHCFRAH*VLQASSHGSTL Trigger: AAGTGTGCTCCCGTGTGAGCTCGCCTGCAGAACTCAGTGTGCCCTGAAGCAGTGCTGCGGGACACGGCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | TGGCGCCTTCTCTGCATCCTTCCCAGAATGCACCTGTaGCCGTGTCCCGCAGCACTGCTTCAGGGCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: WRLLCILPRMHL*PCPAALLQGTL Trigger: CAGTGTGCCCTGAAGCAGTGCTGCGGGACACGGCCACAGGTGCATTCTGGGAAGGATGCAGAGAAGGCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS GCA 72 bp | ATGTGGGCAGTGGCGATGATCCTGCTTCCCGCCAGCTaGCAGACATGTAGCTCATGGACTTCCTCAACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: MWAVAMILLPAS*QTCSSWTSSTP Trigger: CGGCGTTGAGGAAGTCCATGAGCTACATGTCTGGCAGCTGGCGGGAAGCAGGATCATCGCCACTGCCCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | ATTTTTCTGGCTCTGCCTGGTCCGCCTTCAGCCCGTTaGAATTGCTGGTGTTGGCCACCAGCGTGTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IFLALPGPPSAR*NCWCWPPACWS Trigger: AGACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CAA 72 bp | AATTTTTCTGGCTCTGCCTGGTCCGCCTTCAGCCCGTaGGAATTGCTGGTGTTGGCCACCAGCGTGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NFSGSAWSAFSP*ELLVLATSVLV Trigger: GACCAACACGCTGGTGGCCAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | ACTGGGTCATCACTTCTCAATTTTTCTGGCTCTGCCTaGTCCGCCTTCAGCCCGTTGGAATTGCTGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGSSLLNFSGSA*SAFSPLELLVL Trigger: CAACACCAGCAATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | TTGTACATCCACTGGGTCATCACTTCTCAATTTTTCTaGCTCTGCCTGGTCCGCCTTCAGCCCGTTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: LYIHWVITSQFF*LCLVRLQPVGI Trigger: AATTCCAACGGGCTGAAGGCGGACCAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGTGGATGTACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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| CDS CCA 72 bp | CTCCTGGATGAGATTCCCATTTACTTGTACATCCACTaGGTCATCACTTCTCAATTTTTCTGGCTCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLDEIPIYLYIH*VITSQFFWLCL Trigger: CAGGCAGAGCCAGAAAAATTGAGAAGTGATGACCCAGTGGATGTACAAGTAAATGGGAATCTCATCCAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044954.7 |
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