Pregenerated sensors for SLC2A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026791Ensembl transcript IDs: ENSMUST00000028129.13, ENSMUST00000153484.7, ENSMUST00000193695.2, ENSMUST00000194066.6
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCAGGCCAGTCCCACTTGGACATCCACAGGCTCCGCCGCGATaGGCACCAGGCCTACGTGGGAGGAGTTGCTGGGGAGGCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PARPVPLGHPQAPPR*APGLRGRSCWGGSG Trigger: CCCAGAGCCTCCCCAGCAACTCCTCCCACGTAGGCCTGGTGCCCATCGCGGCGGAGCCTGTGGATGTCCAAGTGGGACTGGCCTGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR GCA 90 bp | CCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGCTaGCTCAGTCTTAAGAAGGAGACACCTGGGTCAGGTGAGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: PQPGNGSQEPSGPFS*LSLKKETPGSGEDA Trigger: TGCATCCTCACCTGACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR GCA 90 bp | GGTGAGGATGCACAGCTCCTCAGATGTCCTGTGTGTGAAGCAGGCTaGAGAGACCGCACTCAGAGTCTGGTGGGCCTCACGGTGGGAATC | + |
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Preference number: 1 (lower is better) Translates to: GEDAQLLRCPVCEAG*RDRTQSLVGLTVGI Trigger: GATTCCCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACACAGGACATCTGAGGAGCTGTGCATCCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR GCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTaGGCAGCTCTGAGGAGGGCTTGGTTGGCAAGAACATTCTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: VMGKLAGPRVTPESL*AALRRAWLARTFSL Trigger: AAGAGAGAATGTTCTTGCCAACCAAGCCCTCCTCAGAGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR CCA 90 bp | GTCCTGTGTGTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTGGTaGGCCTCACGGTGGGAATCTGGGTTGAGATCTGGGCAAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VLCVKQAAETALRVW*ASRWESGLRSGQRG Trigger: CCCTCTTTGCCCAGATCTCAACCCAGATTCCCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACACAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR GCA 90 bp | AACCAGTTGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATaGAGAGGGAAGATCTCTGACATGAGGAGCCAGGGGATGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: NQLVRTQMPVATPLT*RGKISDMRSQGMGP Trigger: GGGACCCATCCCCTGGCTCCTCATGTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAACTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR TCA 90 bp | CTCCTCGAAGATGCTGTTGGCATAGAACATGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCATGAGGGAAATGCCGATGATGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LLEDAVGIEHDSIDP*QLLEDHEGNADDEG Trigger: CCCCTCATCATCGGCATTTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATCATGTTCTATGCCAACAGCATCTTCGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194066.6 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTGCGCAGCTTGGTGGGCCTCACGGTaGGAATCTGGGTTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: VMGKLAGPRVTPESLCAAWWASR*ESGLRS Trigger: AGATCTCAACCCAGATTCCCACCGTGAGGCCCACCA...AGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATGCAGAGGGAAGGGCACCAGGCCTACGTaGGAGGAGTTGCTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QLVRTQMPVATPLTCRGKGTRPT*EELLGR Trigger: CCTCCCCAGCAACTCCTCCCACGTAGGCCTGGTGCC...CTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR TCA 90 bp | CGTCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGCGCAGAAGGCAGCGGTaGGCCAGAAGGCACCGTAGG | + |
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Preference number: 2 (lower is better) Translates to: RPSKWAVTCSRVLPLVSGRRRQR*ARRHRR Trigger: CCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGCG...CCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTACCGCACTCAGAGTCTaGTGGGCCTCACGGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RSPQVPSAASVLRRRHLGTALRV*WASRWE Trigger: TTCCCACCGTGAGGCCCACCAGACTCTGAGTGCGGT...ACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR CAA 90 bp | GCCATGAACCAGTTGGTGAGGACACAGATGCCGGTAGCCACACCCTaGACATGCAGAGGGAAGATCTCTGACATGAGGAGCCAGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: AMNQLVRTQMPVATP*TCRGKISDMRSQGM Trigger: CATCCCCTGGCTCCTCATGTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAACTGGTTCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCATCTCCATGACGCTGCTGAACTCTTTGGTCACTAGAAAGGCCATGAACCGCAGAAGGCAGCGGTaGGCCAGAAGGCACCGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LSISMTLLNSLVTRKAMNRRRQR*ARRHRR Trigger: CCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGCG...GTTCATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGTCATGGAGATGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR GCA 90 bp | AACAAGATATGGTGGCTAATGACCCAGGACACGGAGCCCAGGAAAGAGCCAGAAACCCCGGAGAGTCTCTaGGCAGCTCTGAGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NKIWWLMTQDTEPRKEPETPESL*AALRRA Trigger: AGCCCTCCTCAGAGCTGCGCAGAGACTCTCCGGGGT...TTCTGGCTCTTTCCTGGGCTCCGTGTCCTGGGTCATTAGCCACCATATCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGCGTGGGAGGAGTTGCTaGGGAGGCTCTGGGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: AVTCSRVLPLVSGTTVSVRGRSC*GGSGSV Trigger: AACTGACCCAGAGCCTCCCCAGCAACTCCTCCCACG...CACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTTGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTAAGAGGGCCCTGAGGTaGGGAGTCAGGGGGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LGWQEHSLFYLGSPDLVSKRALR*GVRGPP Trigger: TGGAGGCCCCCTGACTCCTCACCTCAGGGCCCTCTT...AGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACCGTAGGGTCTGAGCATCTCCATGACGCTGCTGAACTCTTTGGTCACCCTCGAAATGGGCTGTaGCTTGTTCCAGAGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: EGTVGSEHLHDAAELFGHPRNGL*LVPESC Trigger: GCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGG...GTGACCAAAGAGTTCAGCAGCGTCATGGAGATGCTCAGACCCTACGGTGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACCGTAGGGTCTGAGCATCTCCATGACGCTGCTGAACTCTTTGGTCACCCGCAAAGCCAGCAATaGAGAGGCACATGCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: EGTVGSEHLHDAAELFGHPQSQQ*RGTCCL Trigger: TAGGCAGCATGTGCCTCTTCATTGCTGGCTTTGCGG...GTGACCAAAGAGTTCAGCAGCGTCATGGAGATGCTCAGACCCTACGGTGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGAGCCCGGTGGGAATCTGGGTTaGGATCTGGGCAAAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: WQEHSLFYLGSPDLVSEPGGNLG*DLGKEG Trigger: GCCCTCTTTGCCCAGATCTCAACCCAGATTCCCACC...GGGCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATGCAGAGGGAAGATCGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCAT | + |
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Preference number: 2 (lower is better) Translates to: LVRTQMPVATPLTCRGKIDSIDP*QLLEDH Trigger: ATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATC...GATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194066.6 |
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| 3UTR-3UTR GCA 90 bp | GTCACTAGAAAGGCCATGAACCAGTTGGTGAGGACACAGATGCCGGTAGCCACATTGACCCCTGACAGCTaGTGGAAGACCATGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VTRKAMNQLVRTQMPVATLTPDS*WKTMRE Trigger: TTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAA...TGTGGCTACCGGCATCTGTGTCCTCACCAACTGGTTCATGGCCTTTCTAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194066.6 |
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| 3UTR CAA 90 bp | ATGACGCTGCTGAACTCTTTGGTCACTAGAAAGGCCATGAACCAGTaGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATGCAGA | + |
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Preference number: 2 (lower is better) Translates to: MTLLNSLVTRKAMNQ*VRTQMPVATPLTCR Trigger: TCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAACTGGTTCATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTTGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGCACTCAGAGTCTGGTaGGCCTCACGGTGGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: LGWQEHSLFYLGSPDLVSALRVW*ASRWES Trigger: AGATTCCCACCGTGAGGCCCACCAGACTCTGAGTGC...AGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR TCA 90 bp | GTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGAATGGCTCTGGGTCAGTTTaGAGTAGGTACCAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: VTCSRVLPLVSGTTVSVNGSGSV*SRYQRH Trigger: GTGCCTTTGGTACCTACTTCAAACTGACCCAGAGCC...ATTCACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGAGCGCTCAAACTGAGGTGTaGCTTAGTTACAGGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: VGKNILSSTWAHLTLFLSAQTEV*LSYRPL Trigger: GAGTGGCCTGTAACTAAGCCACACCTCAGTTTGAGC...GCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CAA 90 bp | GGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGCTGCCTCGGTGGGAATCTGGGTaGAGATCTGGGCAAAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GTPARKREPGALRSLQLPRWESG*RSGQRG Trigger: CCCTCTTTGCCCAGATCTCAACCCAGATTCCCACCG...AGGCAGCTGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR GCA 72 bp | AAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTaGGCAGCTCTGAGGAGGGCTTGGTTGGCAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: KLAGPRVTPESL*AALRRAWLART Trigger: TGTTCTTGCCAACCAAGCCCTCCTCAGAGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR CCA 72 bp | GTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTGGTaGGCCTCACGGTGGGAATCTGGGTTGAGATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: VKQAAETALRVW*ASRWESGLRSG Trigger: CCCAGATCTCAACCCAGATTCCCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACCCTACGTGGGAGGAGTaGCTGGGGAGGCTCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: SLEMGCDLFQSPAFSLRDPTWEE*LGRLWV Trigger: GACCCAGAGCCTCCCCAGCAACTCCTCCCACGTAGG...GTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR GCA 72 bp | GTGAGGACACAGATGCCGGTAGCCACACCCTTGACATaGAGAGGGAAGATCTCTGACATGAGGAGCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: VRTQMPVATPLT*RGKISDMRSQG Trigger: CCCCTGGCTCCTCATGTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR CCA 72 bp | TGTGTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTaGTGGGCCTCACGGTGGGAATCTGGGTTGAGATCT | + |
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Preference number: 3 (lower is better) Translates to: CVKQAAETALRV*WASRWESGLRS Trigger: AGATCTCAACCCAGATTCCCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CAA 90 bp | GTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGAATCCTACGTGGGAGGAGTaGCTGGGGAGGCTCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VTCSRVLPLVSGTTVSVNPTWEE*LGRLWV Trigger: GACCCAGAGCCTCCCCAGCAACTCCTCCCACGTAGG...ATTCACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR-3UTR CAA 90 bp | GCCATGAACCAGTTGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATGCGAAATGGGCTGTGACTaGTTCCAGAGTCCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: AMNQLVRTQMPVATPLTCEMGCD*FQSPAF Trigger: AAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTC...GCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAACTGGTTCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR CCA 72 bp | GAGGGCTTGGTTGGCAAGAACATTCTCTCTTCTACCTaGGCTCACCTGACCTTGTTTCTGAGCCCATATGGC | + |
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Preference number: 3 (lower is better) Translates to: EGLVGKNILSST*AHLTLFLSPYG Trigger: GCCATATGGGCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAACCAAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGAGCATCTCCATGACGCTGCTGAACTCTTTGGTCACTAGAAAGGCCATGACGCTGCTGAACTCTTaGGTCACTAGAAAGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GLSISMTLLNSLVTRKAMTLLNS*VTRKAM Trigger: CATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGT...CATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGTCATGGAGATGCTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| 3UTR TCA 72 bp | GATGCTGTTGGCATAGAACATGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCATGAGGGAAATGCCGAT | + |
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Preference number: 3 (lower is better) Translates to: DAVGIEHDSIDP*QLLEDHEGNAD Trigger: ATCGGCATTTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATCATGTTCTATGCCAACAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194066.6 |
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| 3UTR TCA 72 bp | CCAAAGGCACTCATACTGAACACCATGATCACACCTTaGACTTGGCCTCCTCGAAGATGCTGTTGGCATAGA | + |
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Preference number: 3 (lower is better) Translates to: PKALILNTMITP*TWPPRRCCWHR Trigger: TCTATGCCAACAGCATCTTCGAGGAGGCCAAGTTCAAGGTGTGATCATGGTGTTCAGTATGAGTGCCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194066.6 |
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| CDS-3UTR TCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTGCGCAGCTGCGCGAAGCCGAAGCTaGGGGGTCCCAGAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VMGKLAGPRVTPESLCAAARSRS*GVPERR Trigger: CCGCCGCTCTGGGACCCCTCAGCTTCGGCTTCGCGC...AGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | ACCGGGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGCTGCCCAGTATGCCCCCTaGAGCAGCGCCCAGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TGHPSQETGARSPQVPSAAQYAP*SSAQGH Trigger: GTGACCCTGGGCGCTGCTGCAGGGGGCATACTGGGC...AGCTGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCCCGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | GCTCCGCCGCGATGGGCACCAGGCCTACGTGGGAGGAGTTGCTGGGGAGGCTCTCTCAGCAGGGCCAGCTaGAAGCCCTGGTGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: APPRWAPGLRGRSCWGGSLSRAS*KPWCSA Trigger: GGCTGAGCACCAGGGCTTCCAGCTGGCCCTGCTGAG...AGAGCCTCCCCAGCAACTCCTCCCACGTAGGCCTGGTGCCCATCGCGGCGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS-3UTR TCA 90 bp | CCCCAGCCCACCGCAAAGCCAGCAATGAAGAGGCACATGCTGCCTACAGCCAGCGCGCGAAGCCGAAGCTaGGGGGTCCCAGAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PQPTAKPAMKRHMLPTASARSRS*GVPERR Trigger: CCGCCGCTCTGGGACCCCTCAGCTTCGGCTTCGCGC...GCTGGCTGTAGGCAGCATGTGCCTCTTCATTGCTGGCTTTGCGGTGGGCTGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS-3UTR GCA 90 bp | GGCCACTCCACTCCTTCTGAAACCCAAAGGCAGCTCAGCTCGGGGCTCCCAGGCGGCCGCAATAGCGGCTaGGTCTCCTGGGGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GHSTPSETQRQLSSGLPGGRNSG*VSWGSS Trigger: CGAGGACCCCCAGGAGACGCAGCCGCTATTGCGGCC...GCCTGGGAGCCCCGAGCTGAGCTGCCTTTGGGTTTCAGAAGGAGTGGAGTGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | GGGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGCTGCCGAGCAGCCTTCGCCCTaGTCTGTCCATGATGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GHPSQETGARSPQVPSAAEQPSP*SVHDEG Trigger: GCCCTCATCATGGACAGAGCAGGGCGAAGGCTGCTC...GGCAGCTGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | GGCAGCGGTGAGCCAGAAGGCACCGTAGGGTCTGAGCATCTCCATGACGCTGCTGCCGCAGGCTGGGGATaGCGGGGGAGCTGTAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GSGEPEGTVGSEHLHDAAAAGWG*RGSCSR Trigger: TCGGCTACAGCTCCCCCGCCATCCCCAGCCTGCGGC...AGCAGCGTCATGGAGATGCTCAGACCCTACGGTGCCTTCTGGCTCACCGCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTGCGCAGCTGGCACCAGGCCTACGTaGGAGGAGTTGCTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VMGKLAGPRVTPESLCAAGTRPT*EELLGR Trigger: CCTCCCCAGCAACTCCTCCCACGTAGGCCTGGTGCC...AGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | GACACTGAGAGCGCAGAAGGCAGCGGTGAGCCAGAAGGCACCGTAGGGTCTGAGGGCCGCAATAGCGGCTaGGTCTCCTGGGGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: DTESAEGSGEPEGTVGSEGRNSG*VSWGSS Trigger: CGAGGACCCCCAGGAGACGCAGCCGCTATTGCGGCC...CTCAGACCCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGCGCTCTCAGTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR GCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTGCGCAGCTGCAAGAGGCTCAGCTTaGGCCCTGCACGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VMGKLAGPRVTPESLCAAARGSA*ALHGPG Trigger: TCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGC...AGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | GGGGATGGGTCCCCAGCCCACCGCAAAGCCAGCAATGAAGAGGCACATGCTGCCGCAAGAGGCTCAGCTTaGGCCCTGCACGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSPAHRKASNEEAHAAARGSA*ALHGPG Trigger: TCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGC...GGCAGCATGTGCCTCTTCATTGCTGGCTTTGCGGTGGGCTGGGGACCCATCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS-3UTR TCA 90 bp | GGCCACTCCACTCCTTCTGAAACCCAAAGGCAGCTCAGCTCGGGGCTCCCAGGCGGATTATGCCCACAGTaGCCGAGGCCAGGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHSTPSETQRQLSSGLPGGLCPQ*PRPGCC Trigger: ACAGCAGCCTGGCCTCGGTCACTGTGGGCATAATCC...GCCTGGGAGCCCCGAGCTGAGCTGCCTTTGGGTTTCAGAAGGAGTGGAGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCAGCCGCAGGCTGGGGATaGCGGGGGAGCTGTAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPFSCLSLKKETPGSAAGWG*RGSCSR Trigger: TCGGCTACAGCTCCCCCGCCATCCCCAGCCTGCGGC...TGACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | AGGACCGGGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCACAGTCCTCGGACAGCTaGGTAGGCGATTTCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTGHPSQETGARSPQVPSQSSDS*VGDFRD Trigger: ATCTCGGAAATCGCCTACCCAGCTGTCCGAGGACTG...TGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCCCGGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
||
| CDS-3UTR TCA 90 bp | TCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACGCGCGAAGCCGAAGCTaGGGGGTCCCAGAGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLEMGCDLFQSPAFSLRDARSRS*GVPERR Trigger: CCGCCGCTCTGGGACCCCTCAGCTTCGGCTTCGCGC...GTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR TCA 90 bp | AGGACCGGGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGGCTCTGGGTCAGTTTaGAGTAGGTACCAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTGHPSQETGARSPQVPSGSGSV*SRYQRH Trigger: GTGCCTTTGGTACCTACTTCAAACTGACCCAGAGCC...TGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCCCGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | GGCCACTCCACTCCTTCTGAAACCCAAAGGCAGCTCAGCTCGGGGCTCCCAGGCGGAAGATCTCTGACATaGGGAGCCAGGGGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHSTPSETQRQLSSGLPGGRSLT*GARGWV Trigger: GACCCATCCCCTGGCTCCTCATGTCAGAGATCTTCC...GCCTGGGAGCCCCGAGCTGAGCTGCCTTTGGGTTTCAGAAGGAGTGGAGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | CCTGAGGTGAGGAGTCAGGGGGCCTCCAGGCTCAAACTGAGGTGTGGCTTAGTTCGCAGAAGGCAGCGGTaGGCCAGAAGGCACCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVRSQGASRLKLRCGLVRRRQR*ARRHRR Trigger: CCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGCG...AACTAAGCCACACCTCAGTTTGAGCCTGGAGGCCCCCTGACTCCTCACCTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | AGGACACAGATGCCGGTAGCCACACCCTTGACATGCAGAGGGAAGATCTCTGACGGCCGCAATAGCGGCTaGGTCTCCTGGGGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTQMPVATPLTCRGKISDGRNSG*VSWGSS Trigger: CGAGGACCCCCAGGAGACGCAGCCGCTATTGCGGCC...GTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR GCA 90 bp | TTGGTGAGGACACAGATGCCGGTAGCCACACCCTTGACATGCAGAGGGAAGATCGCTCAGCTTGCGCCCTaGACGGTCCAGGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRTQMPVATPLTCRGKIAQLAP*TVQEPA Trigger: GGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGC...GATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGGCATCTGTGTCCTCACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCTCAGCAGGGCCAGCTaGAAGCCCTGGTGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPQVPSAASVLRRRHLGLSRAS*KPWCSA Trigger: GGCTGAGCACCAGGGCTTCCAGCTGGCCCTGCTGAG...ACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | GTGATGGGTAAGCTGGCTGGCCCCAGGGTGACCCCGGAGAGTCTCTGCGCAGCTGCAGTGAACAGGACCTaGATTATGCCCACAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VMGKLAGPRVTPESLCAAAVNRT*IMPTVT Trigger: GGTCACTGTGGGCATAATCCAGGTCCTGTTCACTGC...AGCTGCGCAGAGACTCTCCGGGGTCACCCTGGGGCCAGCCAGCTTACCCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | TGTGTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTGGTGGGCCTCACGGTGGCAGAGGGAAGATCTCTaGCATGAGGAGCCAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVKQAAETALRVWWASRWQREDL*HEEPGD Trigger: ATCCCCTGGCTCCTCATGTCAGAGATCTTCCCTCTG...CCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | CTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGAATAGGACACTGAGAGCGCAGGGCCGCAATAGCGGCTaGGTCTCCTGGGGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPLVSGTTVSVNRTLRAQGRNSG*VSWGSS Trigger: CGAGGACCCCCAGGAGACGCAGCCGCTATTGCGGCC...CTGCGCTCTCAGTGTCCTATTCACACTGACCGTTGTCCCTGAGACTAAAGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR GCA 90 bp | GGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGCTCAGCTTGCGCCCTaGACGGTCCAGGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCDLFQSPAFSLRDNGQCAQLAP*TVQEPA Trigger: GGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGC...ACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR GCA 90 bp | AGCGCAGAAGGCAGCGGTGAGCCAGAAGGCACCGTAGGGTCTGAGCATCTCCATTCACGAAGGGCACGGTaGAGAGCAAGAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAEGSGEPEGTVGSEHLHSRRAR*RARGSA Trigger: AGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGA...ATGGAGATGCTCAGACCCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCAGGCCAGTCCCACTTaGACATCCACAGGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPQVPSAASVLRRRHLGQASPT*TSTGSA Trigger: GGCGGAGCCTGTGGATGTCCAAGTGGGACTGGCCTG...ACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | TGTGTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTGGTGGGCCTCACGGTGGGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CVKQAAETALRVWWASRWDSIDP*QLLEDH Trigger: ATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATC...CCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | AACAAGATATGGTGGCTAATGACCCAGGACACGGAGCCCAGGAAAGAGCCAGAAGCTCAGCTTGCGCCCTaGACGGTCCAGGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKIWWLMTQDTEPRKEPEAQLAP*TVQEPA Trigger: GGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGC...TTCTGGCTCTTTCCTGGGCTCCGTGTCCTGGGTCATTAGCCACCATATCTTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CCA 90 bp | GTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGAATGCCGCAGGCTGGGGATaGCGGGGGAGCTGTAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTCSRVLPLVSGTTVSVNAAGWG*RGSCSR Trigger: TCGGCTACAGCTCCCCCGCCATCCCCAGCCTGCGGC...ATTCACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR TCA 90 bp | GAAGGCAGCGGTGAGCCAGAAGGCACCGTAGGGTCTGAGCATCTCCATGACGCTGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSGEPEGTVGSEHLHDADSIDP*QLLEDH Trigger: ATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATC...AGCGTCATGGAGATGCTCAGACCCTACGGTGCCTTCTGGCTCACCGCTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCCAGGCTGCTGTCCTTaGACTTGGCCTCCTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPQVPSAASVLRRRHLGPGCCP*TWPPRR Trigger: TCTTCGAGGAGGCCAAGTTCAAGGACAGCAGCCTGG...ACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | GTTACAGGCCACTCCACTCCTTCTGAAACCCAAAGGCAGCTCAGCTCGGGGCTCCCGCAAAGCCAGCAATaGAGAGGCACATGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTGHSTPSETQRQLSSGLPQSQQ*RGTCCL Trigger: TAGGCAGCATGTGCCTCTTCATTGCTGGCTTTGCGG...GAGCCCCGAGCTGAGCTGCCTTTGGGTTTCAGAAGGAGTGGAGTGGCCTGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | AGTGTGAATAGGACACTGAGAGCGCAGAAGGCAGCGGTGAGCCAGAAGGCACCGCAGAGGGAAGATCTCTaGCATGAGGAGCCAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVNRTLRAQKAAVSQKAPQREDL*HEEPGD Trigger: ATCCCCTGGCTCCTCATGTCAGAGATCTTCCCTCTG...CGGTGCCTTCTGGCTCACCGCTGCCTTCTGCGCTCTCAGTGTCCTATTCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153484.7 |
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| CDS-3UTR GCA 90 bp | TCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACGCAAGAGGCTCAGCTTaGGCCCTGCACGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLEMGCDLFQSPAFSLRDARGSA*ALHGPG Trigger: TCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGC...GTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR GCA 90 bp | GCAGAAGGCAGCGGTGAGCCAGAAGGCACCGTAGGGTCTGAGCATCTCCATGACGCCACACCCTTGACATaGAGAGGGAAGATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEGSGEPEGTVGSEHLHDATPLT*RGKISD Trigger: GTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGC...GTCATGGAGATGCTCAGACCCTACGGTGCCTTCTGGCTCACCGCTGCCTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153484.7 |
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| 3UTR CAA 72 bp | CCGGAGAGTCTCTGCGCAGCTCTGAGGAGGGCTTGGTaGGCAAGAACATTCTCTCTTCTACCTGGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PESLCAALRRAW*ARTFSLLPGLT Trigger: GGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAACCAAGCCCTCCTCAGAGCTGCGCAGAGACTCTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | GAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCACCTCGAAATGGGCTGTaGCTTGTTCCAGAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPFSCLSLKKETPGSPRNGL*LVPESC Trigger: GCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGG...TGACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | AGTGTGAATAGGACACTGAGAGCGCAGAAGGCAGCGGTGAGCCAGAAGGCACCGTTGACCCCTGACAGCTaGTGGAAGACCATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVNRTLRAQKAAVSQKAPLTPDS*WKTMRE Trigger: TTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAA...CGGTGCCTTCTGGCTCACCGCTGCCTTCTGCGCTCTCAGTGTCCTATTCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CCA 90 bp | TGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGAACTCAGCAGGGCCAGCTaGAAGCCCTGGTGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CDLFQSPAFSLRDNGQCELSRAS*KPWCSA Trigger: GGCTGAGCACCAGGGCTTCCAGCTGGCCCTGCTGAG...TTCACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CCA 90 bp | TGGCTAATGACCCAGGACACGGAGCCCAGGAAAGAGCCAGAAAGAACCTGTAAGCGTGGGAGGAGTTGCTaGGGAGGCTCTGGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WLMTQDTEPRKEPERTCKRGRSC*GGSGSV Trigger: AACTGACCCAGAGCCTCCCCAGCAACTCCTCCCACG...CTTACAGGTTCTTTCTGGCTCTTTCCTGGGCTCCGTGTCCTGGGTCATTAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | GAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCAGGTACTGGTGTTGAGTaGGGAGAAAACGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPFSCLSLKKETPGSGTGVE*GENVGS Trigger: AGACCCCACGTTTTCTCCTCACTCAACACCAGTACC...TGACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR TCA 90 bp | TGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGGAAGATCTCTGACATaGGGAGCCAGGGGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WAVTCSRVLPLVSGTTVSGRSLT*GARGWV Trigger: GACCCATCCCCTGGCTCCTCATGTCAGAGATCTTCC...ACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153484.7 |
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| CDS-3UTR GCA 90 bp | AGGAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTGCCACACCCTTGACATaGAGAGGGAAGATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPQVPSAASVLRRRHLGATPLT*RGKISD Trigger: GTCAGAGATCTTCCCTCTGCATGTCAAGGGTGTGGC...ACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
||
| CDS-3UTR TCA 90 bp | CGTCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGGGTACTGGTGTTGAGTaGGGAGAAAACGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSKWAVTCSRVLPLVSGGTGVE*GENVGS Trigger: AGACCCCACGTTTTCTCCTCACTCAACACCAGTACC...CCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR GCA 90 bp | TGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGAGCCCTCACGAAGGGCACGGTaGAGAGCAAGAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHSLFYLGSPDLVSEPSRRAR*RARGSA Trigger: AGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGA...GGGCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
||
| CDS-3UTR GCA 90 bp | TCATCGTCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCTCACGAAGGGCACGGTaGAGAGCAAGAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLEMGCDLFQSPAFSLSRRAR*RARGSA Trigger: AGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGA...GAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
||
| CDS-3UTR GCA 90 bp | TCGTCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGTGACAACCATCAGCTaGACACAGGAGCCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEMGCDLFQSPAFSLRVTTIS*TQEPSS Trigger: ACTGCTCGGCTCCTGTGTGCAGCTGATGGTTGTCAC...CCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTGGTGACAACCATCAGCTaGACACAGGAGCCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVTCSRVLPLVSGTTVSVVTTIS*TQEPSS Trigger: ACTGCTCGGCTCCTGTGTGCAGCTGATGGTTGTCAC...CACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTCAGTCCTCGGACAGCTaGGTAGGCGATTTCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCDLFQSPAFSLRDNGQCQSSDS*VGDFRD Trigger: ATCTCGGAAATCGCCTACCCAGCTGTCCGAGGACTG...ACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACGATAGCATTGACCCCTaGCAGCTGCTGGAAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLEMGCDLFQSPAFSLRDDSIDP*QLLEDH Trigger: ATGGTCTTCCAGCAGCTGTCAGGGGTCAATGCTATC...GTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGTTGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGGGCCGCCACAGCAGTaGACAGGACCTGGATTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGWQEHSLFYLGSPDLVSGPPQQ*TGPGLC Trigger: GCATAATCCAGGTCCTGTTCACTGCTGTGGCGGCCC...AGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGAGCCCGTGACAACCATCAGCTaGACACAGGAGCCGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQEHSLFYLGSPDLVSEPVTTIS*TQEPSS Trigger: ACTGCTCGGCTCCTGTGTGCAGCTGATGGTTGTCAC...GGGCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| 3UTR CAA 72 bp | AAGGGTCTGTCATCGTCCCTCGAAATGGGCTGTGACTaGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAAC | + |
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Preference number: 4 (lower is better) Translates to: KGLSSSLEMGCD*FQSPAFSLRDN Trigger: GTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACGATGACAGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR GCA 90 bp | GTTGGCAAGAACATTCTCTCTTCTACCTGGGCTCACCTGACCTTGTTTCTGAGCTTGACCCCTGACAGCTaGTGGAAGACCATGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VGKNILSSTWAHLTLFLSLTPDS*WKTMRE Trigger: TTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAA...GCTCAGAAACAAGGTCAGGTGAGCCCAGGTAGAAGAGAGAATGTTCTTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR GCA 90 bp | AGCATCTCCATGACGCTGCTGAACTCTTTGGTCACTAGAAAGGCCATGAACCAGTTGACCCCTGACAGCTaGTGGAAGACCATGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SISMTLLNSLVTRKAMNQLTPDS*WKTMRE Trigger: TTCCCTCATGGTCTTCCAGCAGCTGTCAGGGGTCAA...CTGGTTCATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGTCATGGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS GCA 90 bp | CTTGCGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCCTaGAGCAGCGCCCAGGGTCACGACGGCCCCGAACCAGGAGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LAPCTVQEPAAQYAP*SSAQGHDGPEPGGR Trigger: GCGGCCTCCTGGTTCGGGGCCGTCGTGACCCTGGGCGCTGCTGCAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 90 bp | GGCTCAGCTTGCGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTATaGCCCCTGCAGCAGCGCCCAGGGTCACGACGGCCCCGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSACALHGPGASRPV*PLQQRPGSRRPRTR Trigger: CCTGGTTCGGGGCCGTCGTGACCCTGGGCGCTGCTGCAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS CCA 90 bp | CGGCGGCGAAGGAAGCGAGGAAGACCCGGCGGCCGCGGGGAGTCCTaGCTTCCGGTGGCCGCAATAGCGGCTGCGTCTCCTGGGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RRRRKRGRPGGRGES*LPVAAIAAASPGGP Trigger: AGGACCCCCAGGAGACGCAGCCGCTATTGCGGCCACCGGAAGCCAGGACTCCCCGCGGCCGCCGGGTCTTCCTCGCTTCCTTCGCCGCCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CAA 90 bp | AGGCTCCGCCGCGATGGGCACCAGGCCTACGTGGGAGGAGTTGCTGGGGAGGCTAACCAGGAGGCCGCATaGTCTCCGAGGCGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RLRRDGHQAYVGGVAGEANQEAA*SPRRRA Trigger: GGCCCTGCGCCTCGGAGACAATGCGGCCTCCTGGTT...AGCCTCCCCAGCAACTCCTCCCACGTAGGCCTGGTGCCCATCGCGGCGGAGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193695.2 |
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| CDS TCA 90 bp | TGTAAACCGGTGCCACTAGTGAGGCGACTCCGCAGGCAAGGCCGGTaGGGAGGCGGCCTCCGAGCAGCATCCACACATCCCGGGCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: CKPVPLVRRLRRQGR*GGGLRAASTHPGPR Trigger: CCGCGGCCCGGGATGTGTGGATGCTGCTCGGAGGCCGCCTCCTCACCGGCCTTGCCTGCGGAGTCGCCTCACTAGTGGCACCGGTTTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 90 bp | AGTCACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTTGCGCCCTaGACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCCTGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHEGHGAEQEAQLAP*TVQEPAAQYAPCSS Trigger: GCTGCTGCAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 90 bp | CAAAGCCAGTCACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTTaGGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QSQSRRARCRARGSA*ALHGPGASRPVCPL Trigger: CAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGACTGGCTTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGAAGCAGGCTGCAGAGACCGCACTCAGAGTCTGGTGGGCCTCACGGTGGAACCAGGAGGCCGCATaGTCTCCGAGGCGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CVKQAAETALRVWWASRWNQEAA*SPRRRA Trigger: GGCCCTGCGCCTCGGAGACAATGCGGCCTCCTGGTT...CCACCGTGAGGCCCACCAGACTCTGAGTGCGGTCTCTGCAGCCTGCTTCACACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS TCA 90 bp | GCCACTCTAGGACCCAGCCTGCCACATAGGCCAGGAGGATGCCAGTaGCAACCATCAGCTGCACACAGGAGCCGAGCAGTCCTCGGACAG | + |
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Preference number: 5 (lower is better) Translates to: ATLGPSLPHRPGGCQ*QPSAAHRSRAVLGQ Trigger: CTGTCCGAGGACTGCTCGGCTCCTGTGTGCAGCTGATGGTTGTCACTGGCATCCTCCTGGCCTATGTGGCAGGCTGGGTCCTAGAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CAA 90 bp | ACCGGGCACCCCAGCCAGGAAACGGGAGCCAGGAGCCCTCAGGTCCCTTCAGCTGAAATGGGCTGTGACTaGTTCCAGAGTCCTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TGHPSQETGARSPQVPSAEMGCD*FQSPAF Trigger: AAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTC...AGCTGAAGGGACCTGAGGGCTCCTGGCTCCCGTTTCCTGGCTGGGGTGCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS CCA 90 bp | GGCAGCCATGGCCTCCTGGTACTGGTGTTGAGTGAGGAGAAAACGTaGGGTCTCGGGCATGTAGCACATGAGCAGCAGCATGAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSHGLLVLVLSEEKT*GLGHVAHEQQHEGG Trigger: CCCACCCTCATGCTGCTGCTCATGTGCTACATGCCCGAGACCCCACGTTTTCTCCTCACTCAACACCAGTACCAGGAGGCCATGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS-3UTR CAA 90 bp | GGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGGACAACGGTCAGTGTAACCAGGAGGCCGCATaGTCTCCGAGGCGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GCDLFQSPAFSLRDNGQCNQEAA*SPRRRA Trigger: GGCCCTGCGCCTCGGAGACAATGCGGCCTCCTGGTT...ACACTGACCGTTGTCCCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCTCAGGTCCCTTCAGCTGCCTCAGTCTTAAGAAGGAGACACCTGGGTCAGCCAGGCTGCTGTCCTaGAACTTGGCCTCCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: EPSGPFSCLSLKKETPGSARLLS*NLASSK Trigger: CTTCGAGGAGGCCAAGTTCAAGGACAGCAGCCTGGC...TGACCCAGGTGTCTCCTTCTTAAGACTGAGGCAGCTGAAGGGACCTGAGGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CAA 90 bp | TGGCTAATGACCCAGGACACGGAGCCCAGGAAAGAGCCAGAAAGAACCTGTAAGCCTACGTGGGAGGAGTaGCTGGGGAGGCTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: WLMTQDTEPRKEPERTCKPTWEE*LGRLWV Trigger: GACCCAGAGCCTCCCCAGCAACTCCTCCCACGTAGG...CTTACAGGTTCTTTCTGGCTCTTTCCTGGGCTCCGTGTCCTGGGTCATTAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CAA 90 bp | GTTACAGGCCACTCCACTCCTTCTGAAACCCAAAGGCAGCTCAGCTCGGGGCTCCCGGTAGCCACACCCTaGACATGCAGAGGGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: VTGHSTPSETQRQLSSGLPVATP*TCRGKI Trigger: GATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGG...GAGCCCCGAGCTGAGCTGCCTTTGGGTTTCAGAAGGAGTGGAGTGGCCTGTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS-3UTR CAA 90 bp | TCGTCCCTCGAAATGGGCTGTGACTTGTTCCAGAGTCCTGCCTTTAGTCTCAGGCCGGTAGCCACACCCTaGACATGCAGAGGGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: SSLEMGCDLFQSPAFSLRPVATP*TCRGKI Trigger: GATCTTCCCTCTGCATGTCAAGGGTGTGGCTACCGG...CCTGAGACTAAAGGCAGGACTCTGGAACAAGTCACAGCCCATTTCGAGGGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153484.7 |
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| CDS-3UTR CAA 90 bp | TGGCTAATGACCCAGGACACGGAGCCCAGGAAAGAGCCAGAAAGAACCTGTAAGACGCTGCTGAACTCTTaGGTCACTAGAAAGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: WLMTQDTEPRKEPERTCKTLLNS*VTRKAM Trigger: CATGGCCTTTCTAGTGACCAAAGAGTTCAGCAGCGT...CTTACAGGTTCTTTCTGGCTCTTTCCTGGGCTCCGTGTCCTGGGTCATTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028129.13 |
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| CDS CCA 72 bp | CGAGGCGCAGGGCCGGGGGTGCGGTGCGCCGCAGGCTaGGGATGGCGGGGGAGCTGTAGCCGAGCGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RGAGPGVRCAAG*GWRGSCSRARS Trigger: GCTTCGCGCTCGGCTACAGCTCCCCCGCCATCCCCAGCCTGCGGCGCACCGCACCCCCGGCCCTGCGCCTCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS CAA 72 bp | CCCAGGGTCACGACGGCCCCGAACCAGGAGGCCGCATaGTCTCCGAGGCGCAGGGCCGGGGGTGCGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: PRVTTAPNQEAA*SPRRRAGGAVR Trigger: GCGCACCGCACCCCCGGCCCTGCGCCTCGGAGACAATGCGGCCTCCTGGTTCGGGGCCGTCGTGACCCTGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 72 bp | TGCGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTATaGCCCCTGCAGCAGCGCCCAGGGTCACGACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CALHGPGASRPV*PLQQRPGSRRP Trigger: GGGCCGTCGTGACCCTGGGCGCTGCTGCAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 72 bp | TGCACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCCTaGAGCAGCGCCCAGGGTCACGACGGCCCCGAACCA | + |
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Preference number: 6 (lower is better) Translates to: CTVQEPAAQYAP*SSAQGHDGPEP Trigger: TGGTTCGGGGCCGTCGTGACCCTGGGCGCTGCTGCAGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 72 bp | GGGCACGGTGCAGAGCAAGAGGCTCAGCTTGCGCCCTaGACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GHGAEQEAQLAP*TVQEPAAQYAP Trigger: GGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGCTCTGCACCGTGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS TCA 72 bp | GTGCCACTAGTGAGGCGACTCCGCAGGCAAGGCCGGTaGGGAGGCGGCCTCCGAGCAGCATCCACACATCCC | + |
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Preference number: 6 (lower is better) Translates to: VPLVRRLRRQGR*GGGLRAASTHP Trigger: GGGATGTGTGGATGCTGCTCGGAGGCCGCCTCCTCACCGGCCTTGCCTGCGGAGTCGCCTCACTAGTGGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS CAA 90 bp | GCAAAGCCAGTCACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTaGCGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTATGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: AKPVTKGTVQSKRLS*RPARSRSQPPSMPP Trigger: AGGGGGCATACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGACTGGCTTTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS GCA 72 bp | TCACGAAGGGCACGGTGCAGAGCAAGAGGCTCAGCTTaGGCCCTGCACGGTCCAGGAGCCAGCCGCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SRRARCRARGSA*ALHGPGASRPV Trigger: TACTGGGCGGCTGGCTCCTGGACCGTGCAGGGCGCAAGCTGAGCCTCTTGCTCTGCACCGTGCCCTTCGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS TCA 72 bp | GGACCCAGCCTGCCACATAGGCCAGGAGGATGCCAGTaGCAACCATCAGCTGCACACAGGAGCCGAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GPSLPHRPGGCQ*QPSAAHRSRAV Trigger: GACTGCTCGGCTCCTGTGTGCAGCTGATGGTTGTCACTGGCATCCTCCTGGCCTATGTGGCAGGCTGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS CCA 72 bp | CAGCTGCACACAGGAGCCGAGCAGTCCTCGGACAGCTaGGTAGGCGATTTCCGAGATGTAAACCGGTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QLHTGAEQSSDS*VGDFRDVNRCH Trigger: GTGGCACCGGTTTACATCTCGGAAATCGCCTACCCAGCTGTCCGAGGACTGCTCGGCTCCTGTGTGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 |
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| CDS TCA 72 bp | GCAAGGCAGCCATGGCCTCCTGGTACTGGTGTTGAGTaGGGAGAAAACGTGGGGTCTCGGGCATGTAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ARQPWPPGTGVE*GENVGSRACST Trigger: TGTGCTACATGCCCGAGACCCCACGTTTTCTCCTCACTCAACACCAGTACCAGGAGGCCATGGCTGCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS CAA 72 bp | GAAGCGCAAGGCAGCCATGGCCTCCTGGTACTGGTGTaGAGTGAGGAGAAAACGTGGGGTCTCGGGCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: EAQGSHGLLVLV*SEEKTWGLGHV Trigger: TACATGCCCGAGACCCCACGTTTTCTCCTCACTCAACACCAGTACCAGGAGGCCATGGCTGCCTTGCGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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| CDS CCA 72 bp | GGCCTCCTGGTACTGGTGTTGAGTGAGGAGAAAACGTaGGGTCTCGGGCATGTAGCACATGAGCAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GLLVLVLSEEKT*GLGHVAHEQQH Trigger: ATGCTGCTGCTCATGTGCTACATGCCCGAGACCCCACGTTTTCTCCTCACTCAACACCAGTACCAGGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028129.13 ENSMUST00000153484.7 ENSMUST00000193695.2 ENSMUST00000194066.6 |
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