Pregenerated sensors for SLC2A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018566Ensembl transcript IDs: ENSMUST00000018710.13, ENSMUST00000141837.9, ENSMUST00000152487.8, ENSMUST00000178363.8, ENSMUST00000179298.3
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGCCGGTGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATTaGACGCTCTCTCTCCAACTTCCGTTTCTCATCCTTCAGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RLPVGAAAQELEQGH*TLSLQLPFLILQLS Trigger: GCTGAGCTGAAGGATGAGAAACGGAAGTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR CCA 90 bp | ACTGCGATGATCAGAGGCTGCCGGTGGGTGCGGCTGCCCAGGAGCTaGAGCAAGGACATTGGACGCTCTCTCTCCAACTTCCGTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: TAMIRGCRWVRLPRS*SKDIGRSLSNFRFS Trigger: TGAGAAACGGAAGTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCTCTGATCATCGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR CCA 90 bp | AATCAGCTGCAGGAGAGCAGGGAGTACTGTGAGAGCCAGAAGCAGTaGCCACAGGGTAGCTGTGCCCAGCATAGACTCCAAGCCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: NQLQESREYCESQKQ*PQGSCAQHRLQAQH Trigger: GTGCTGGGCTTGGAGTCTATGCTGGGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTCACAGTACTCCCTGCTCTCCTGCAGCTGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR GCA 90 bp | GGGTACATGGACCACCCCTCCCTTCAGCTTCCCAGTTCCCCAGGCTaGTGTTCCTTCAACCTGGAGGTAACAGGGAAGAGAGGGCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: GYMDHPSLQLPSSPG*CSFNLEVTGKRGLK Trigger: CTTTAGCCCTCTCTTCCCTGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAGCTGAAGGGAGGGGTGGTCCATGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 90 bp | TTGCCCTGTCAGGTATGTACTATTGTGTTCCTTTGCCCGGGAGGGTaGAGCCTGTGGGGAGGCAGGGCTAGATTTTGGGAGGGTGTATCC | + |
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Preference number: 1 (lower is better) Translates to: LPCQVCTIVFLCPGG*SLWGGRARFWEGVS Trigger: GGATACACCCTCCCAAAATCTAGCCCTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACCTGACAGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR GCA 90 bp | TGCTGTTCCTTCAACCTGGAGGTAACAGGGAAGAGAGGGCTAAAGTaGTGTAGAGGAAAGGAGGGAGTCTGGGTGGAGAGGGTGGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CCSFNLEVTGKRGLK*CRGKEGVWVERVAL Trigger: GAGAGCCACCCTCTCCACCCAGACTCCCTCCTTTCCTCTACAGCACTTTAGCCCTCTCTTCCCTGTTACCTCCAGGTTGAAGGAACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR GCA 90 bp | GACGAATCTCTATATACACATTTAATACAGCAGCCCTTGGGTTTCTaGTCCCTATCCGTTCTTCAAAACATACAAAAATACCAAAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: DESLYTHLIQQPLGF*SLSVLQNIQKYQRL Trigger: GAGCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTGTATTAAATGTGTATATAGAGATTCGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATTGGACGCTCTCTCTCCAACGAGAGCCAGAAGCAGTaGCCACAGGGTAGCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: WVRLPRSWSKDIGRSLSNESQKQ*PQGSCA Trigger: GGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTC...GTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR CAA 90 bp | GAGGCTGCCGGTGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATaGGACGCTCTCTCTCCAACTTCCGTTTCTCATCCTTCAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EAAGGCGCPGAGART*DALSPTSVSHPSAQ Trigger: CTGAGCTGAAGGATGAGAAACGGAAGTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGCTGCCCAGGAGCTGGAGCAAGGACATTGGACGCTCTCTCTCCAACTTCCGCCTCCAGGTTCCGGATaGTGTAGAGGTATCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AAAQELEQGHWTLSLQLPPPGSG*CRGIWG Trigger: GCCCCAGATACCTCTACATCATCCGGAACCTGGAGG...CGGAAGTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGGAGGCCACCCCACCCTCCTaGAGACCCCTTCTCGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLVPTLCSPGNNLGPQMEATPPS*RPLLER Trigger: CCTTTCGAGAAGGGGTCTGCAGGAGGGTGGGGTGGC...CTCCATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATTGGACGCTCTCTCTCCAACGGCAGCAGAATCAGCTaGAGGAGAGCAGGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: WVRLPRSWSKDIGRSLSNGSRIS*RRAGST Trigger: AGTACTCCCTGCTCTCCTGCAGCTGATTCTGCTGCC...GTTGGAGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGCTTTGCCCGGGAGGGTaGAGCCTGTGGGGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KVLVPTLCSPGNNLGPQMLCPGG*SLWGGR Trigger: CCTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAG...CATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCCTTCAGCTCAGCTAGTGCGTCAGACACATCAGCCCAGCCGGTCAGGCCTCCAGGTTCCGGATaGTGTAGAGGTATCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FSSFSSASASDTSAQPVRPPGSG*CRGIWG Trigger: GCCCCAGATACCTCTACATCATCCGGAACCTGGAGG...CCTGACCGGCTGGGCTGATGTGTCTGACGCACTAGCTGAGCTGAAGGATGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTCAGCTAGTGCGTCAGACACATCAGCCCAGCCGGTCAGGCGCTTTAGACGGCAGCAGAATCAGCTaGAGGAGAGCAGGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SAQLVRQTHQPSRSGALDGSRIS*RRAGST Trigger: AGTACTCCCTGCTCTCCTGCAGCTGATTCTGCTGCC...GTCTAAAGCGCCTGACCGGCTGGGCTGATGTGTCTGACGCACTAGCTGAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR CAA 90 bp | AAGCTTTCGGGTTTAGCACCCTTCCTGGAGGGGAACAAGAAAGTGTaGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KLSGLAPFLEGNKKV*VPTLCSPGNNLGPQ Trigger: TTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACACTTTCTTGTTCCCCTCCAGGAAGGGTGCTAAACCCGAAAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR CCA 90 bp | AAGCACTCGCTCACACACCCACCCCTGCTGTTTATCCTGATGAATTCAGGGCCAGAAAGCCCATCTAGGTaGCCACAGCCTAGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: KHSLTHPPLLFILMNSGPESPSR*PQPSHT Trigger: TGTGTGGCTAGGCTGTGGCCACCTAGATGGGCTTTC...TGGCCCTGAATTCATCAGGATAAACAGCAGGGGTGGGTGTGTGAGCGAGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGGCTAGATTTTGGGAGGGTGTATCCTTTGCCCTGGAGGGGTCAAGACAAAGAGTTCAGTGGAAGTaGCAGTTTGTGGGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GRARFWEGVSFALEGSRQRVQWK*QFVGGK Trigger: CTTTCCTCCCACAAACTGGCACTTCCACTGAACTCT...TTGTCTTGACCCCTCCAGGGCAAAGGATACACCCTCCCAAAATCTAGCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCCCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACGTGTATCCTTTGCCCTaGAGGGGTCAAGACAACCCC | + |
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Preference number: 2 (lower is better) Translates to: QQPLGFCSLSVLQNIQKYVYPLP*RGQDNP Trigger: GGGGTTGTCTTGACCCCTCCAGGGCAAAGGATACAC...GTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR-3UTR GCA 90 bp | TCAAACAGTGACTTTATGGACGAATCTCTATATACACATTTAATACAGCAGCCCACTATTGTGTTCCTTTaGCCGGGAGGGTGGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SNSDFMDESLYTHLIQQPTIVFL*PGGWSL Trigger: CAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGT...GGGCTGCTGTATTAAATGTGTATATAGAGATTCGTCCATAAAGTCACTGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CAA 90 bp | GACTTTATGGACGAATCTCTATATACACATTTAATACAGCAGCCCTaGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: DFMDESLYTHLIQQP*GFCSLSVLQNIQKY Trigger: GTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTGTATTAAATGTGTATATAGAGATTCGTCCATAAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 72 bp | AGAGGGCTAAAGTGCTGTAGAGGAAAGGAGGGAGTCTaGGTGGAGAGGGTGGCTCTCCCACCCTGTTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: RGLKCCRGKEGV*VERVALPPCFA Trigger: GGCAAAACAGGGTGGGAGAGCCACCCTCTCCACCCAGACTCCCTCCTTTCCTCTACAGCACTTTAGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 72 bp | ACTATTGTGTTCCTTTGCCCGGGAGGGTGGAGCCTGTaGGGAGGCAGGGCTAGATTTTGGGAGGGTGTATCC | + |
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Preference number: 3 (lower is better) Translates to: TIVFLCPGGWSL*GGRARFWEGVS Trigger: GGATACACCCTCCCAAAATCTAGCCCTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 72 bp | CAGGAGAGCAGGGAGTACTGTGAGAGCCAGAAGCAGTaGCCACAGGGTAGCTGTGCCCAGCATAGACTCCAA | + |
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Preference number: 3 (lower is better) Translates to: QESREYCESQKQ*PQGSCAQHRLQ Trigger: TTGGAGTCTATGCTGGGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTCACAGTACTCCCTGCTCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGGAGTACTATTGTGTTCCTTaGCCCGGGAGGGTGGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: VLVPTLCSPGNNLGPQMEYYCVP*PGRVEP Trigger: AGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTA...CTCCATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 72 bp | CAGGTATGTACTATTGTGTTCCTTTGCCCGGGAGGGTaGAGCCTGTGGGGAGGCAGGGCTAGATTTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QVCTIVFLCPGG*SLWGGRARFWE Trigger: CTCCCAAAATCTAGCCCTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR GCA 72 bp | TCACCCAGAGCCTGTGTGGCAAGAGTTCAGTGGAAGTaGCAGTTTGTGGGAGGAAAGCACTCGCTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: SPRACVARVQWK*QFVGGKHSLTH Trigger: GTGTGTGAGCGAGTGCTTTCCTCCCACAAACTGGCACTTCCACTGAACTCTTGCCACACAGGCTCTGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR CCA 72 bp | TATAGGCAGCCTTTCAAATCCCCTCCCGCCCTTAGTTaGTCAGAAGCTTTCGGGTTTAGCACCCTTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: YRQPFKSPPALS*SEAFGFSTLPG Trigger: TCCAGGAAGGGTGCTAAACCCGAAAGCTTCTGACCAACTAAGGGCGGGAGGGGATTTGAAAGGCTGCCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| 3UTR GCA 72 bp | CTATATACACATTTAATACAGCAGCCCTTGGGTTTCTaGTCCCTATCCGTTCTTCAAAACATACAAAAATAC | + |
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Preference number: 3 (lower is better) Translates to: LYTHLIQQPLGF*SLSVLQNIQKY Trigger: GTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTGTATTAAATGTGTATATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | GCCGGTGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATTGGACGCTCTCTCTGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: AGGCGCPGAGARTLDALSVPVTR*RGGSPS Trigger: CGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAAC...AGAGAGAGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| CDS-3UTR GCA 90 bp | CCCTTCTCGAAAGGGGAGGAAAGTAGTCTAGAGCTGAGTCTGGGTAGGGGCAGGGCCGGTGGGTGCGGCTaGCCAGGAGCTGGAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PFSKGEESSLELSLGRGRAGGCG*PGAGAR Trigger: CCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGC...CCTGCCCCTACCCAGACTCAGCTCTAGACTACTTTCCTCCCCTTTCGAGAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CACCCAGAGCCTGTGTGGCAAGAGTTCAGTGGAAGTGCCAGTTTGTGGGAGGAAGAGGCTGCCGGTGGGTaGGGCTGCCCAGGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HPEPVWQEFSGSASLWEEEAAGG*GCPGAG Trigger: TCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCTC...TTCCTCCCACAAACTGGCACTTCCACTGAACTCTTGCCACACAGGCTCTGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CTCGCTCACACACCCACCCCTGCTGTTTATCCTGATGAATTCAGGGCCACCCCAGCGATGATCAGAGGCTaGCGGTGGGTGCGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LAHTPTPAVYPDEFRATPAMIRG*RWVRLP Trigger: GGGCAGCCGCACCCACCGGCAGCCTCTGATCATCGC...TGGGGTGGCCCTGAATTCATCAGGATAAACAGCAGGGGTGGGTGTGTGAGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | CAGGAGGAAGGCAGGACGGAGAAAGCCCATCTAGGTGGCCACAGCCTAGCCACACCGTCGGAAGGCAGCTaGGATCTGGTCAAACGTCCG | + |
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Preference number: 4 (lower is better) Translates to: QEEGRTEKAHLGGHSLATPSEGS*DLVKRP Trigger: CGGACGTTTGACCAGATCTCAGCTGCCTTCCGACGG...TGTGGCTAGGCTGTGGCCACCTAGATGGGCTTTCTCCGTCCTGCCTTCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCGCCGGTGGGTGCGGCTaGCCAGGAGCTGGAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSCWISTYFHPSISACLPAGGCG*PGAGAR Trigger: CCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGC...GGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR GCA 90 bp | CCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGGAGGCTGCCGGTGGGTaGGGCTGCCCAGGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PPISTHLFPPASPLIVVKEAAGG*GCPGAG Trigger: TCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCTC...CTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGGTGTATCCTTTGCCCTGGAGGGGTCAAGACAACCCCCTTCACCCAGTATGGTGGCGTAGGCTaGCTGTCCCACCCCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LGGCILCPGGVKTTPFTQYGGVG*LSHPSR Trigger: TCGGCTGGGGTGGGACAGCCAGCCTACGCCACCATA...CTGGGTGAAGGGGGTTGTCTTGACCCCTCCAGGGCAAAGGATACACCCTCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | TCCCTTCAGCTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACAGCAGCACCACTGCGATaGTCAGAGGCTGCCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLQLPSSPGCCSFNLEVTAAPLR*SEAAGG Trigger: CCCACCGGCAGCCTCTGATCATCGCAGTGGTGCTGC...TGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAGCTGAAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CAGAATCAGCTGCAGGAGAGCAGGGAGTACTGTGAGAGCCAGAAGCAGTGGCCAGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: QNQLQESREYCESQKQWPVPVTR*RGGSPS Trigger: CGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAAC...TGGCCACTGCTTCTGGCTCTCACAGTACTCCCTGCTCTCCTGCAGCTGATTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000152487.8 ENSMUST00000178363.8 |
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| CDS-3UTR GCA 90 bp | CACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTCCACCAGCGATGATCAGAGGCTaGCGGTGGGTGCGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HPSISACLPLDCGEVVPPAMIRG*RWVRLP Trigger: GGGCAGCCGCACCCACCGGCAGCCTCTGATCATCGC...TGGTGGAACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR TCA 90 bp | CCCTTCTCGAAAGGGGAGGAAAGTAGTCTAGAGCTGAGTCTGGGTAGGGGCAGGCGATGGCCAGTTGGTTaGGTGTTCCCAAGGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: PFSKGEESSLELSLGRGRRWPVG*VFPRHP Trigger: GGGGTGCCTTGGGAACACTCAACCAACTGGCCATCG...CCTGCCCCTACCCAGACTCAGCTCTAGACTACTTTCCTCCCCTTTCGAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | GGTATGTACTATTGTGTTCCTTTGCCCGGGAGGGTGGAGCCTGTGGGGAGGCAGCCTCCAGGTTCCGGATaGTGTAGAGGTATCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GMYYCVPLPGRVEPVGRQPPGSG*CRGIWG Trigger: GCCCCAGATACCTCTACATCATCCGGAACCTGGAGG...CTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACAGGGAAGAGAGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: LPSSPGCCSFNLEVTGKRVPVTR*RGGSPS Trigger: CGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAAC...TCTCTTCCCTGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | GAGTTCAGTGGAAGTGCCAGTTTGTGGGAGGAAAGCACTCGCTCACACACCCACGAGCAGGGAGTACTGTaGGAGCCAGAAGCAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: EFSGSASLWEESTRSHTHEQGVL*EPEAVA Trigger: GGCCACTGCTTCTGGCTCTCACAGTACTCCCTGCTC...GTGGGTGTGTGAGCGAGTGCTTTCCTCCCACAAACTGGCACTTCCACTGAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR GCA 90 bp | CTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: LSCWISTYFHPSISACLPVPVTR*RGGSPS Trigger: CGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAAC...GGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | GCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGGAGAGCCAGAAGCAGTaGCCACAGGGTAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGFPPISTHLFPPASPLESQKQ*PQGSCA Trigger: GGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTC...CAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTATCAGAGGCTGCCGGTaGGTGCGGCTGCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCIRGCR*VRLPRS Trigger: GCTCCTGGGCAGCCGCACCCACCGGCAGCCTCTGAT...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCTATGGTGGCGTAGGCTaGCTGTCCCACCCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSCWISTYFHPSISACLPYGGVG*LSHPSR Trigger: TCGGCTGGGGTGGGACAGCCAGCCTACGCCACCATA...GGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| 3UTR CAA 72 bp | CGCTCTAACCGTCCTTGCCCTGTCAGGTATGTACTATaGTGTTCCTTTGCCCGGGAGGGTGGAGCCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNRPCPVRYVL*CSFAREGGACG Trigger: CCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACCTGACAGGGCAAGGACGGTTAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR TCA 90 bp | CACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTCCACCAGAGCAGGGAGTACTGTaGGAGCCAGAAGCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPSISACLPLDCGEVVPPEQGVL*EPEAVA Trigger: GGCCACTGCTTCTGGCTCTCACAGTACTCCCTGCTC...TGGTGGAACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | CCACCCCTGCTGTTTATCCTGATGAATTCAGGGCCACCCCACCCTCCTGCAGACAACAGCATTGATGCCTaGGAGCTGTTGGCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLFILMNSGPPHPPADNSIDA*ELLAQL Trigger: CAGCTGAGCCAACAGCTCTCAGGCATCAATGCTGTT...GTCTGCAGGAGGGTGGGGTGGCCCTGAATTCATCAGGATAAACAGCAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCACCCAGAGCCTGTGTGGCAAGAGTTCAGTGGAAGTGCCAGTTTGTGGGGCAGCAGAATCAGCTaGAGGAGAGCAGGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLHPEPVWQEFSGSASLWGSRIS*RRAGST Trigger: AGTACTCCCTGCTCTCCTGCAGCTGATTCTGCTGCC...CCACAAACTGGCACTTCCACTGAACTCTTGCCACACAGGCTCTGGGTGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGGAGAGCTGTTGGCTCAGCTaGAGCACCACTGCGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLVPTLCSPGNNLGPQMESCWLS*STTAMI Trigger: GATCATCGCAGTGGTGCTGCAGCTGAGCCAACAGCT...CTCCATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGAGTGAGGGTGCCTTGTaGGATGGAATCCGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPISTHLFPPASPLIVVKSEGAL*DGIRSP Trigger: GGGGGACCGGATTCCATCCCACAAGGCACCCTCACT...CTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGCCTTTCAAATCCCCTCCCGCCCTTAGTTGGTCAGAAGCTTTCGGGTGAGAGCCAGAAGCAGTaGCCACAGGGTAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGSLSNPLPPLVGQKLSGESQKQ*PQGSCA Trigger: GGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTC...ACCCGAAAGCTTCTGACCAACTAAGGGCGGGAGGGGATTTGAAAGGCTGCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGCCACACCAGCTCCTATaGTGGCGTAGGCTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLVPTLCSPGNNLGPQMPHQLL*WRRLAV Trigger: GACAGCCAGCCTACGCCACCATAGGAGCTGGTGTGG...CATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCCACACCAGCTCCTATaGTGGCGTAGGCTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCWISTYFHPSISACLPPHQLL*WRRLAV Trigger: GACAGCCAGCCTACGCCACCATAGGAGCTGGTGTGG...GGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTGCAGCACCACTGCGATaGTCAGAGGCTGCCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFHPSISACLPLDCGEVVAAPLR*SEAAGG Trigger: CCCACCGGCAGCCTCTGATCATCGCAGTGGTGCTGC...AACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGAGCTGTTGGCTCAGCTaGAGCACCACTGCGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: AAGFPPISTHLFPPASPLSCWLS*STTAMI Trigger: GATCATCGCAGTGGTGCTGCAGCTGAGCCAACAGCT...CAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR GCA 90 bp | TATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTGGGGCCGGGAGGATTTaGCTTCCCTCTGGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFHPSISACLPLDCGEVVGAGRI*LPSGHG Trigger: TCCGTGGCCAGAGGGAAGGCAAATCCTCCCGGCCCC...AACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | TCCCAACCAGTGTTTATAGGCAGCCTTTCAAATCCCCTCCCGCCCTTAGTTGGTAGTGAGGGTGCCTTGTaGGATGGAATCCGGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPVFIGSLSNPLPPLVGSEGAL*DGIRSP Trigger: GGGGGACCGGATTCCATCCCACAAGGCACCCTCACT...ACCAACTAAGGGCGGGAGGGGATTTGAAAGGCTGCCTATAAACACTGGTTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGCCTTTCAAATCCCCTCCCGCCCTTAGTTGGTCAGAAGCTTTCGGGTCACCCACAGAGAAGATaGCCACGGAGAGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGSLSNPLPPLVGQKLSGHPQRR*PRREPR Trigger: TCTGGGCTCTCTCCGTGGCCATCTTCTCTGTGGGTG...ACCCGAAAGCTTCTGACCAACTAAGGGCGGGAGGGGATTTGAAAGGCTGCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTCGGCTGCCCAGGAGCTaGAGCAAGGACATTGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCRLPRS*SKDIGR Trigger: GCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCG...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | TCTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCACCAGCTCCTATGGTaGCGTAGGCTGGCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLLDFHLFPPIYFRLPPHQLLW*RRLAVP Trigger: TGGGACAGCCAGCCTACGCCACCATAGGAGCTGGTG...GGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTCAGCTGCAGCACCACTaGGATGATCAGAGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCQLQHH*DDQRLP Trigger: CGGCAGCCTCTGATCATCGCAGTGGTGCTGCAGCTG...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACATCAGAGGCTGCCGGTaGGTGCGGCTGCCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQPLGFCSLSVLQNIQKYIRGCR*VRLPRS Trigger: GCTCCTGGGCAGCCGCACCCACCGGCAGCCTCTGAT...GTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | GGTATGTACTATTGTGTTCCTTTGCCCGGGAGGGTGGAGCCTGTGGGGAGGCAGCCACAAAGCCAAATATaGCCACGATGGAGACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMYYCVPLPGRVEPVGRQPQSQI*PRWRHS Trigger: GCTATGTCTCCATCGTGGCCATATTTGGCTTTGTGG...CTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR CCA 90 bp | AAAGTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLVPTLCSPGNNLGPQMKAAEI*SNVRPL Trigger: CAGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTT...CATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | CAGGAGGAAGGCAGGACGGAGAAAGCCCATCTAGGTGGCCACAGCCTAGCCACATTCCTTCCCAACCATTaGGAAATGATGCCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEEGRTEKAHLGGHSLATFLPNH*EMMPMR Trigger: TCTCATTGGCATCATTTCTCAATGGTTGGGAAGGAA...TGTGGCTAGGCTGTGGCCACCTAGATGGGCTTTCTCCGTCCTGCCTTCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR TCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTCCTCCAGGTTCCGGATaGTGTAGAGGTATCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCPPGSG*CRGIWG Trigger: GCCCCAGATACCTCTACATCATCCGGAACCTGGAGG...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | CACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTCCACCAAACAGCATTGATGCCTaGGAGCTGTTGGCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPSISACLPLDCGEVVPPNSIDA*ELLAQL Trigger: CAGCTGAGCCAACAGCTCTCAGGCATCAATGCTGTT...TGGTGGAACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR GCA 90 bp | GAGTTCAGTGGAAGTGCCAGTTTGTGGGAGGAAAGCACTCGCTCACACACCCACCTGGGTTTCACCTCCTaGTCTAAAAGGGAAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EFSGSASLWEESTRSHTHLGFTS*SKREGV Trigger: GACACCTTCCCTTTTAGAGCAGGAGGTGAAACCCAG...GTGGGTGTGTGAGCGAGTGCTTTCCTCCCACAAACTGGCACTTCCACTGAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR CCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTCCACGGTCATCAAGATaGCACAGCCACACATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCPRSSR*HSHTCR Trigger: CCGGCATGTGTGGCTGTGCCATCTTGATGACCGTGG...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGGCTAGATTTTGGGAGGGTGTATCCTTTGCCCTGGAGGGGTCAAGACAAGCATCCGCAACATACTaGAAACCCATGCCGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRARFWEGVSFALEGSRQASATY*KPMPTM Trigger: CATTGTCGGCATGGGTTTCCAGTATGTTGCGGATGC...TTGTCTTGACCCCTCCAGGGCAAAGGATACACCCTCCCAAAATCTAGCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR CCA 90 bp | CACCCAGAGCCTGTGTGGCAAGAGTTCAGTGGAAGTGCCAGTTTGTGGGAGGAACAAACGTCCGGCCTCTaGTTTCAGGCACTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPEPVWQEFSGSASLWEEQTSGL*FQALLG Trigger: TCCTAAAAGTGCCTGAAACCAGAGGCCGGACGTTTG...TTCCTCCCACAAACTGGCACTTCCACTGAACTCTTGCCACACAGGCTCTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
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| CDS-3UTR CCA 90 bp | TACTGTGAGAGCCAGAAGCAGTGGCCACAGGGTAGCTGTGCCCAGCATAGACTCGCCCTTTTCCTTCTGTaGGGCATTGATAACCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YCESQKQWPQGSCAQHRLALFLL*GIDNPN Trigger: ATTGGGGTTATCAATGCCCCACAGAAGGAAAAGGGC...GAGTCTATGCTGGGCACAGCTACCCTGTGGCCACTGCTTCTGGCTCTCACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152487.8 |
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| CDS-3UTR TCA 90 bp | TGCCTCCCCCTTGATTGTGGTGAAGTAGTTCCACCAGACCTATCTTCCAGAGACGGAACCGTCCAAGAATaGGTATCTCATAGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLPLDCGEVVPPDLSSRDGTVQE*VSHRRP Trigger: CGGCCTCCTATGAGATACTCATTCTTGGACGGTTCC...GTCTCTGGAAGATAGGTCTGGTGGAACTACTTCACCACAATCAAGGGGGAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | TATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTCACCCACAGAGAAGATaGCCACGGAGAGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFHPSISACLPLDCGEVVHPQRR*PRREPR Trigger: TCTGGGCTCTCTCCGTGGCCATCTTCTCTGTGGGTG...AACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACAGGGAAGAGACAAATATGGCCACGATaGAGACATAGCTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPGCCSFNLEVTGKRQIWPR*RHSSWL Trigger: CAGCCATGAGCTATGTCTCCATCGTGGCCATATTTG...TCTCTTCCCTGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGCCTACCGCAACATACTaGAAACCCATGCCGACAATG | + |
|
Preference number: 4 (lower is better) Translates to: PPISTHLFPPASPLIVVKPTATY*KPMPTM Trigger: CATTGTCGGCATGGGTTTCCAGTATGTTGCGGTAGG...CTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
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| CDS-3UTR TCA 90 bp | CCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGAGTAGAAAACAGCATTaGTGCCTGAGAGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPISTHLFPPASPLIVVKSRKQH*CLRAVG Trigger: GCCAACAGCTCTCAGGCATCAATGCTGTTTTCTACT...CTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | GGTATGTACTATTGTGTTCCTTTGCCCGGGAGGGTGGAGCCTGTGGGGAGGCAGCTCGAAGATGCTGGTTaGATAGTAGAAAACAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GMYYCVPLPGRVEPVGRQLEDAG*IVENSI Trigger: AATGCTGTTTTCTACTATTCAACCAGCATCTTCGAG...CTGCCTCCCCACAGGCTCCACCCTCCCGGGCAAAGGAACACAATAGTACATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGCCACAAAGCCAAATATaGCCACGATGGAGACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPISTHLFPPASPLIVVKPQSQI*PRWRHS Trigger: GCTATGTCTCCATCGTGGCCATATTTGGCTTTGTGG...CTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACCAAAGGCCAGCTGCAGCACCACTaGGATGATCAGAGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PWVSAPYPFFKTYKNTKGQLQHH*DDQRLP Trigger: CGGCAGCCTCTGATCATCGCAGTGGTGCTGCAGCTG...GCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TCCCAACCAGTGTTTATAGGCAGCCTTTCAAATCCCCTCCCGCCCTTAGTTGGTTTTCTCCCACATACATaGGCACCAGCCCTGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SQPVFIGSLSNPLPPLVGFLPHT*APALML Trigger: TAACATCAGGGCTGGTGCCCATGTATGTGGGAGAAA...ACCAACTAAGGGCGGGAGGGGATTTGAAAGGCTGCCTATAAACACTGGTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TATCCGTTCTTCAAAACATACAAAAATACCAAAGGCTCCCTCCCAACCAGTGTTCGGCTGCCCAGGAGCTaGAGCAAGGACATTGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: YPFFKTYKNTKGSLPTSVRLPRS*SKDIGR Trigger: GCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCG...AACACTGGTTGGGAGGGAGCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCAGCTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACACCGACTCGAAGATGCTaGTTGAATAGTAGAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPSSPGCCSFNLEVTPTRRC*LNSRKQ Trigger: CTGTTTTCTACTATTCAACCAGCATCTTCGAGTCGG...TGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAGCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACCAAAGGCCACCAGCTCCTATGGTaGCGTAGGCTGGCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWVSAPYPFFKTYKNTKGHQLLW*RRLAVP Trigger: TGGGACAGCCAGCCTACGCCACCATAGGAGCTGGTG...GCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTAGTTACAGGTCCAGTTaGAGAAACCAGCGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WISTYFHPSISACLPLDCSYRSS*RNQRQP Trigger: TGGCTGTCGCTGGTTTCTCCAACTGGACCTGTAACT...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCAGCTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACAATTCAAGTTCTGTACTaGGTTTCACCTCCTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPSSPGCCSFNLEVTIQVLY*VSPPAL Trigger: TAGAGCAGGAGGTGAAACCCAGTACAGAACTTGAAT...TGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAGCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACCAAAGGCCCACGGTCATCAAGATaGCACAGCCACACATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWVSAPYPFFKTYKNTKGPRSSR*HSHTCR Trigger: CCGGCATGTGTGGCTGTGCCATCTTGATGACCGTGG...GCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACCAGGAACCGTCCAAGAATaGGTATCTCATAGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AALGFLLPIRSSKHTKIPGTVQE*VSHRRP Trigger: CGGCCTCCTATGAGATACTCATTCTTGGACGGTTCC...TGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCGACTCGAAGATGCTaGTTGAATAGTAGAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLLDFHLFPPIYFRLPPPTRRC*LNSRKQ Trigger: CTGTTTTCTACTATTCAACCAGCATCTTCGAGTCGG...GGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | TATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTCAAATATGGCCACGATaGAGACATAGCTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFHPSISACLPLDCGEVVQIWPR*RHSSWL Trigger: CAGCCATGAGCTATGTCTCCATCGTGGCCATATTTG...AACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | TATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTGAAGTAGTTTTCCTTCCCAACCATTaGGAAATGATGCCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFHPSISACLPLDCGEVVFLPNH*EMMPMR Trigger: TCTCATTGGCATCATTTCTCAATGGTTGGGAAGGAA...AACTACTTCACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGGTCTCGAAGATGCTGGTTaGATAGTAGAAAACAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ISTYFHPSISACLPLDCGLEDAG*IVENSI Trigger: AATGCTGTTTTCTACTATTCAACCAGCATCTTCGAG...ACCACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATACAAAAATACCAAAGGCAGTTACAGGTCCAGTTaGAGAAACCAGCGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWVSAPYPFFKTYKNTKGSYRSS*RNQRQP Trigger: TGGCTGTCGCTGGTTTCTCCAACTGGACCTGTAACT...GCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR TCA 90 bp | TATCCGTTCTTCAAAACATACAAAAATACCAAAGGCTCCCTCCCAACCAGTGTTAGTAGAAAACAGCATTaGTGCCTGAGAGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YPFFKTYKNTKGSLPTSVSRKQH*CLRAVG Trigger: GCCAACAGCTCTCAGGCATCAATGCTGTTTTCTACT...AACACTGGTTGGGAGGGAGCCTTTGGTATTTTTGTATGTTTTGAAGAACGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| 3UTR CAA 72 bp | GACGAATCTCTATATACACATTTAATACAGCAGCCCTaGGGTTTCTGCTCCCTATCCGTTCTTCAAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: DESLYTHLIQQP*GFCSLSVLQNI Trigger: TATGTTTTGAAGAACGGATAGGGAGCAGAAACCCAAGGGCTGCTGTATTAAATGTGTATATAGAGATTCGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | CCACCCCTGCTGTTTATCCTGATGAATTCAGGGCCACCCCACCCTCCTGCAGACCGGTCCCCCAGGACCTaGCCTACCCAGCCACGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLLFILMNSGPPHPPADRSPRT*PTQPRC Trigger: GCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCG...GTCTGCAGGAGGGTGGGGTGGCCCTGAATTCATCAGGATAAACAGCAGGGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGCCGGTGGGTGCGGCTGCCCAGGAGCTGGAGCAAGGACATTGGACGCTAACACGGCCAAGACATaGTTGGCCAGCATAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EAAGGCGCPGAGARTLDANTAKT*LASIAL Trigger: AAGGGCTATGCTGGCCAACAATGTCTTGGCCGTGTT...AGCGTCCAATGTCCTTGCTCCAGCTCCTGGGCAGCCGCACCCACCGGCAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152487.8 |
||
| CDS GCA 90 bp | AGCACAGCTGAGAATACAGCTAGGACCAGTGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCGTCAGAGCCGATCTGCTGGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: STAENTARTSVPVTR*RGGSPSSEPICWKP Trigger: GGGTTTCCAGCAGATCGGCTCTGACGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAACACTGGTCCTAGCTGTATTCTCAGCTGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000152487.8 ENSMUST00000178363.8 ENSMUST00000179298.3 |
||
| CDS CCA 90 bp | GTCATCAAGATGGCACAGCCACACATGCCGGCCAGGCCCAACAGATaGAGTGTCCGTCGTCCAGCTCGTTCTACTAAGAGCACCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VIKMAQPHMPARPNR*SVRRPARSTKSTET Trigger: GGTCTCGGTGCTCTTAGTAGAACGAGCTGGACGACGGACACTCCATCTGTTGGGCCTGGCCGGCATGTGTGGCTGTGCCATCTTGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 |
||
| CDS CCA 90 bp | GGGCCGGGAGGATTTGCCTTCCCTCTGGCCACGGATGTGGGAAACTaGGCAAAGGGTAGGGAACCTACCGCAACATACTGGAAACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GPGGFAFPLATDVGN*AKGREPTATYWKPM Trigger: CATGGGTTTCCAGTATGTTGCGGTAGGTTCCCTACCCTTTGCCCAGTTTCCCACATCCGTGGCCAGAGGGAAGGCAAATCCTCCCGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CAA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTCGGTCCCCCAGGACCTaGCCTACCCAGCCACGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WISTYFHPSISACLPLDCRSPRT*PTQPRC Trigger: GCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCG...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGGCAGGACGGAGAAAGCCCATCTAGGTGGCCACAGCCTAGCCACACAAACACGGCCAAGACATaGTTGGCCAGCATAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGRQDGESPSRWPQPSHTNTAKT*LASIAL Trigger: AAGGGCTATGCTGGCCAACAATGTCTTGGCCGTGTT...TGTGTGGCTAGGCTGTGGCCACCTAGATGGGCTTTCTCCGTCCTGCCTTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | CCACCCCTGCTGTTTATCCTGATGAATTCAGGGCCACCCCACCCTCCTGCAGACAAGTTACAGGTCCAGTaGGAGAAACCAGCGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPLLFILMNSGPPHPPADKLQVQ*EKPATA Trigger: GGCTGTCGCTGGTTTCTCCAACTGGACCTGTAACTT...GTCTGCAGGAGGGTGGGGTGGCCCTGAATTCATCAGGATAAACAGCAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCACCCAGAGCCTGTGTGGCAAGAGTTCAGTGGAAGTGCCAGTTTGTGGGCCTACCCAGCCACGTaGCATTGTAGCTCTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLHPEPVWQEFSGSASLWAYPAT*HCSSVQ Trigger: TTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGC...CCACAAACTGGCACTTCCACTGAACTCTTGCCACACAGGCTCTGGGTGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS GCA 90 bp | TGGGATGGAATCCGGTCCCCCAGGACCTTGCCTACCCAGCCACGTTaGATTGTAGCTCTGTTCAATCACCTTCTGTGGGGCATTGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: WDGIRSPRTLPTQPR*IVALFNHLLWGIDN Trigger: GTTATCAATGCCCCACAGAAGGTGATTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCGGATTCCATCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS CCA 90 bp | TCCTGCTCTAAAAGGGAAGGTGTCCGTCGGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCTGGTTTCAGGCACTTTTAGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSKREGVRRKAAEI*SNVRPLVSGTFRKV Trigger: CACCTTCCTAAAAGTGCCTGAAACCAGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCGACGGACACCTTCCCTTTTAGAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTGGTACCTACGCTTTGCAGCCCTGGGAACAACCTAGGGCCCCAAATGGAGAACGTGAAGACCGTATaGACCACACCAGCTCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: VLVPTLCSPGNNLGPQMENVKTV*TTPAPM Trigger: CATAGGAGCTGGTGTGGTCAATACGGTCTTCACGTT...CTCCATTTGGGGCCCTAGGTTGTTCCCAGGGCTGCAAAGCGTAGGTACCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | CTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCAACACGGCCAAGACATaGTTGGCCAGCATAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCWISTYFHPSISACLPNTAKT*LASIAL Trigger: AAGGGCTATGCTGGCCAACAATGTCTTGGCCGTGTT...GGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGAACGTGAAGACCGTATaGACCACACCAGCTCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: AAGFPPISTHLFPPASPLNVKTV*TTPAPM Trigger: CATAGGAGCTGGTGTGGTCAATACGGTCTTCACGTT...CAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCTGCTGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCAAGTTACAGGTCCAGTaGGAGAAACCAGCGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLLDFHLFPPIYFRLPPKLQVQ*EKPATA Trigger: GGCTGTCGCTGGTTTCTCCAACTGGACCTGTAACTT...GGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCAGCAGCTTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS GCA 90 bp | TCATCTGGCCCTAAGTATTCAAGTTCTGTACTGGGTTTCACCTCCTaGTCTAAAAGGGAAGGTGTCCGTCGGAAGGCAGCTGAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGPKYSSSVLGFTS*SKREGVRRKAAEIW Trigger: CCAGATCTCAGCTGCCTTCCGACGGACACCTTCCCTTTTAGAGCAGGAGGTGAAACCCAGTACAGAACTTGAATACTTAGGGCCAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | TGGATTTCCACCTATTTCCACCCATCTATTTCCGCCTGCCTCCCCCTTGATTGTGCCTACCCAGCCACGTaGCATTGTAGCTCTGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WISTYFHPSISACLPLDCAYPAT*HCSSVQ Trigger: TTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGC...ACAATCAAGGGGGAGGCAGGCGGAAATAGATGGGTGGAAATAGGTGGAAATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGGGTGTATCCTTTGCCCTGGAGGGGTCAAGACAACCCCCTTCACCCAGACTCGAAGATGCTGGTaGAATAGTAGAAAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGCILCPGGVKTTPFTQTRRCW*NSRKQH Trigger: ATGCTGTTTTCTACTATTCAACCAGCATCTTCGAGT...CTGGGTGAAGGGGGTTGTCTTGACCCCTCCAGGGCAAAGGATACACCCTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGCTTCCCAGTTCCCCAGGCTGCTGTTCCTTCAACCTGGAGGTAACATTTCCTTCCCAACCATaGAGAAATGATGCCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLQLPSSPGCCSFNLEVTFPSQP*RNDANE Trigger: CTCATTGGCATCATTTCTCAATGGTTGGGAAGGAAA...TGTTACCTCCAGGTTGAAGGAACAGCAGCCTGGGGAACTGGGAAGCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS TCA 90 bp | GCCAAGACATTGTTGGCCAGCATAGCCCTTTTCCTTCCCAACCATTaGGAAATGATGCCAATGAGAAAGGAAGAGATCATGCCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AKTLLASIALFLPNH*EMMPMRKEEIMPPT Trigger: TGTGGGTGGCATGATCTCTTCCTTTCTCATTGGCATCATTTCTCAATGGTTGGGAAGGAAAAGGGCTATGCTGGCCAACAATGTCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCCCTTGATTGTGGTGAAGTAGTTCCACCAGACCTATCTTCCAGAGACACTCGAAGATGCTGGTaGAATAGTAGAAAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPLDCGEVVPPDLSSRDTRRCW*NSRKQH Trigger: ATGCTGTTTTCTACTATTCAACCAGCATCTTCGAGT...GTCTCTGGAAGATAGGTCTGGTGGAACTACTTCACCACAATCAAGGGGGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS CAA 72 bp | GGCCACGGAGAGAGCCCAGAGCGTAGTGAGGGTGCCTaGTGGGATGGAATCCGGTCCCCCAGGACCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GHGESPERSEGA*WDGIRSPRTLP Trigger: AGGCAAGGTCCTGGGGGACCGGATTCCATCCCACAAGGCACCCTCACTACGCTCTGGGCTCTCTCCGTGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS CCA 72 bp | GGCCGGGAGGATTTGCCTTCCCTCTGGCCACGGATGTaGGAAACTGGGCAAAGGGTAGGGAACCTACCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GREDLPSLWPRM*ETGQRVGNLPQ Trigger: TTGCGGTAGGTTCCCTACCCTTTGCCCAGTTTCCCACATCCGTGGCCAGAGGGAAGGCAAATCCTCCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS GCA 72 bp | GAGAATACAGCTAGGACCAGTGTTCCAGTCACTCGCTaGCGAGGGGGTTCCCCATCGTCAGAGCCGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ENTARTSVPVTR*RGGSPSSEPIC Trigger: GCAGATCGGCTCTGACGATGGGGAACCCCCTCGGCAGCGAGTGACTGGAACACTGGTCCTAGCTGTATTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000152487.8 ENSMUST00000178363.8 ENSMUST00000179298.3 |
||
| CDS CCA 72 bp | ATGGCACAGCCACACATGCCGGCCAGGCCCAACAGATaGAGTGTCCGTCGTCCAGCTCGTTCTACTAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MAQPHMPARPNR*SVRRPARSTKS Trigger: GCTCTTAGTAGAACGAGCTGGACGACGGACACTCCATCTGTTGGGCCTGGCCGGCATGTGTGGCTGTGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 |
||
| CDS CAA 72 bp | GGTGCCTTGTGGGATGGAATCCGGTCCCCCAGGACCTaGCCTACCCAGCCACGTTGCATTGTAGCTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GALWDGIRSPRT*PTQPRCIVALF Trigger: GAACAGAGCTACAATGCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCGGATTCCATCCCACAAGGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS GCA 72 bp | ATCCGGTCCCCCAGGACCTTGCCTACCCAGCCACGTTaGATTGTAGCTCTGTTCAATCACCTTCTGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRSPRTLPTQPR*IVALFNHLLWG Trigger: GCCCCACAGAAGGTGATTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS CAA 72 bp | TGGAAACCCATGCCGACAATGAAGTTACAGGTCCAGTaGGAGAAACCAGCGACAGCCATGGCGGCTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: WKPMPTMKLQVQ*EKPATAMAAGR Trigger: CCGCCCAGCCGCCATGGCTGTCGCTGGTTTCTCCAACTGGACCTGTAACTTCATTGTCGGCATGGGTTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 |
||
| CDS CAA 90 bp | CGTAGTGAGGGTGCCTTGTGGGATGGAATCCGGTCCCCCAGGACCTaGCCTACCCAGCCACGTTGCATTGTAGCTCTGTTCAATCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSEGALWDGIRSPRT*PTQPRCIVALFNHL Trigger: AAGGTGATTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCGGATTCCATCCCACAAGGCACCCTCACTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS CCA 72 bp | CAAAGCCAAATATGGCCACGATGGAGACATAGCTCATaGCTGGAACCCGTTCCAGCAGCAGCAGAGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QSQIWPRWRHSS*LEPVPAAAEPR Trigger: CCGTGGCTCTGCTGCTGCTGGAACGGGTTCCAGCCATGAGCTATGTCTCCATCGTGGCCATATTTGGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 |
||
| CDS CCA 72 bp | GGATTTGCCTTCCCTCTGGCCACGGATGTGGGAAACTaGGCAAAGGGTAGGGAACCTACCGCAACATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFAFPLATDVGN*AKGREPTATYW Trigger: CCAGTATGTTGCGGTAGGTTCCCTACCCTTTGCCCAGTTTCCCACATCCGTGGCCAGAGGGAAGGCAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS CAA 72 bp | AATCCGGTCCCCCAGGACCTTGCCTACCCAGCCACGTaGCATTGTAGCTCTGTTCAATCACCTTCTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NPVPQDLAYPAT*HCSSVQSPSVG Trigger: CCCCACAGAAGGTGATTGAACAGAGCTACAATGCAACGTGGCTGGGTAGGCAAGGTCCTGGGGGACCGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018710.13 ENSMUST00000141837.9 ENSMUST00000179298.3 |
||
| CDS CCA 72 bp | AAAAGGGAAGGTGTCCGTCGGAAGGCAGCTGAGATCTaGTCAAACGTCCGGCCTCTGGTTTCAGGCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KREGVRRKAAEI*SNVRPLVSGTF Trigger: AAAAGTGCCTGAAACCAGAGGCCGGACGTTTGACCAGATCTCAGCTGCCTTCCGACGGACACCTTCCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||
| CDS CCA 72 bp | AACTGGGCAAAGGGTAGGGAACCTACCGCAACATACTaGAAACCCATGCCGACAATGAAGTTACAGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NWAKGREPTATY*KPMPTMKLQVQ Trigger: CTGGACCTGTAACTTCATTGTCGGCATGGGTTTCCAGTATGTTGCGGTAGGTTCCCTACCCTTTGCCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141837.9 |
||
| CDS GCA 72 bp | CCTAAGTATTCAAGTTCTGTACTGGGTTTCACCTCCTaGTCTAAAAGGGAAGGTGTCCGTCGGAAGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PKYSSSVLGFTS*SKREGVRRKAA Trigger: AGCTGCCTTCCGACGGACACCTTCCCTTTTAGAGCAGGAGGTGAAACCCAGTACAGAACTTGAATACTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018710.13 |
||